Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 160, 507 |
| AccII | CGCG | 1 cut(s) | 224 |
| AciI | CCGC | 2 cut(s) | 222, 224 |
| AcoI | YGGCCR | 1 cut(s) | 225 |
| AcyI | GRCGYC | 1 cut(s) | 57 |
| AfaI | GTAC | 1 cut(s) | 439 |
| AgsI | TTSAA | 8 cut(s) | 87, 181, 391, 451, 496, 557, 569, 581 |
| AhlI | ACTAGT | 1 cut(s) | 319 |
| AluBI | AGCT | 3 cut(s) | 32, 82, 235 |
| AluI | AGCT | 3 cut(s) | 32, 82, 235 |
| AoxI | GGCC | 1 cut(s) | 225 |
| ApeKI | GCWGC | 1 cut(s) | 124 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 341 |
| AxyI | CCTNAGG | 1 cut(s) | 100 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 306, 339 |
| BbvI | GCAGC | 1 cut(s) | 136 |
| BccI | CCATC | 5 cut(s) | 202, 241, 299, 523, 608 |
| BciVI | GTATCC | 1 cut(s) | 307 |
| BclI | TGATCA | 1 cut(s) | 399 |
| BcuI | ACTAGT | 1 cut(s) | 319 |
| BfaI | CTAG | 3 cut(s) | 36, 320, 419 |
| BfmI | CTRYAG | 2 cut(s) | 283, 619 |
| BfuI | GTATCC | 1 cut(s) | 307 |
| BisI | GCNGC | 2 cut(s) | 125, 225 |
| BlsI | GCNGC | 2 cut(s) | 126, 226 |
| BmsI | GCATC | 5 cut(s) | 61, 127, 251, 319, 529 |
| BpmI | CTGGAG | 1 cut(s) | 357 |
| Bsa29I | ATCGAT | 1 cut(s) | 537 |
| BsaBI | GATNNNNATC | 1 cut(s) | 533 |
| BsaHI | GRCGYC | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 2 cut(s) | 222, 584 |
| Bse1I | ACTGG | 1 cut(s) | 192 |
| Bse21I | CCTNAGG | 1 cut(s) | 100 |
| Bse3DI | GCAATG | 2 cut(s) | 18, 339 |
| Bse8I | GATNNNNATC | 1 cut(s) | 533 |
| BseCI | ATCGAT | 1 cut(s) | 537 |
| BseDI | CCNNGG | 2 cut(s) | 222, 584 |
| BseGI | GGATG | 3 cut(s) | 266, 534, 619 |
| BseJI | GATNNNNATC | 1 cut(s) | 533 |
| BseMI | GCAATG | 2 cut(s) | 18, 339 |
| BseMII | CTCAG | 1 cut(s) | 360 |
| BseNI | ACTGG | 1 cut(s) | 192 |
| BseRI | GAGGAG | 1 cut(s) | 643 |
| BseXI | GCAGC | 1 cut(s) | 136 |
| Bsh1236I | CGCG | 1 cut(s) | 224 |
| BshFI | GGCC | 1 cut(s) | 227 |
| BshVI | ATCGAT | 1 cut(s) | 537 |
| BsnI | GGCC | 1 cut(s) | 227 |
| Bsp143I | GATC | 2 cut(s) | 3, 399 |
| BspACI | CCGC | 2 cut(s) | 222, 224 |
| BspANI | GGCC | 1 cut(s) | 227 |
| BspCNI | CTCAG | 1 cut(s) | 359 |
| BspDI | ATCGAT | 1 cut(s) | 537 |
| BspFNI | CGCG | 1 cut(s) | 224 |
| BspQI | GCTCTTC | 1 cut(s) | 125 |
| BsrDI | GCAATG | 2 cut(s) | 18, 339 |
| BsrI | ACTGG | 1 cut(s) | 192 |
| BssECI | CCNNGG | 2 cut(s) | 222, 584 |
| BssMI | GATC | 2 cut(s) | 3, 399 |
| BssNAI | GTATAC | 1 cut(s) | 161 |
| BssNI | GRCGYC | 1 cut(s) | 57 |
| BssT1I | CCWWGG | 1 cut(s) | 584 |
| Bst1107I | GTATAC | 1 cut(s) | 161 |
| Bst4CI | ACNGT | 2 cut(s) | 302, 623 |
| Bst6I | CTCTTC | 3 cut(s) | 125, 347, 355 |
| BstACI | GRCGYC | 1 cut(s) | 57 |
| BstC8I | GCNNGC | 2 cut(s) | 76, 80 |
| BstDEI | CTNAG | 3 cut(s) | 100, 239, 346 |
| BstDSI | CCRYGG | 1 cut(s) | 222 |
| BstF5I | GGATG | 3 cut(s) | 266, 534, 619 |
| BstFNI | CGCG | 1 cut(s) | 224 |
| BstKTI | GATC | 2 cut(s) | 6, 402 |
| BstMBI | GATC | 2 cut(s) | 3, 399 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 88, 124, 420 |
| BstSFI | CTRYAG | 2 cut(s) | 283, 619 |
| BstUI | CGCG | 1 cut(s) | 224 |
| BstV1I | GCAGC | 1 cut(s) | 136 |
| BstZ17I | GTATAC | 1 cut(s) | 161 |
| Bsu15I | ATCGAT | 1 cut(s) | 537 |
| Bsu36I | CCTNAGG | 1 cut(s) | 100 |
| BsuI | GTATCC | 1 cut(s) | 307 |
| BsuRI | GGCC | 1 cut(s) | 227 |
| BsuTUI | ATCGAT | 1 cut(s) | 537 |
| BtgI | CCRYGG | 1 cut(s) | 222 |
| BtsCI | GGATG | 3 cut(s) | 266, 534, 619 |
| BtsIMutI | CAGTG | 2 cut(s) | 185, 628 |
| Cac8I | GCNNGC | 2 cut(s) | 76, 80 |
| Cfr42I | CCGCGG | 1 cut(s) | 225 |
| ClaI | ATCGAT | 1 cut(s) | 537 |
| CseI | GACGC | 3 cut(s) | 15, 65, 518 |
| Csp6I | GTAC | 1 cut(s) | 438 |
| CviAII | CATG | 2 cut(s) | 8, 205 |
| CviJI | RGCY | 6 cut(s) | 32, 82, 198, 227, 235, 618 |
| CviKI_1 | RGCY | 6 cut(s) | 32, 82, 198, 227, 235, 618 |
| CviQI | GTAC | 1 cut(s) | 438 |
| DdeI | CTNAG | 3 cut(s) | 100, 239, 346 |
| DpnI | GATC | 2 cut(s) | 5, 401 |
| DpnII | GATC | 2 cut(s) | 3, 399 |
| EaeI | YGGCCR | 1 cut(s) | 225 |
| Eam1104I | CTCTTC | 3 cut(s) | 125, 347, 355 |
| EarI | CTCTTC | 3 cut(s) | 125, 347, 355 |
| Eco130I | CCWWGG | 1 cut(s) | 584 |
| Eco81I | CCTNAGG | 1 cut(s) | 100 |
| EcoT14I | CCWWGG | 1 cut(s) | 584 |
| ErhI | CCWWGG | 1 cut(s) | 584 |
| FaeI | CATG | 2 cut(s) | 11, 208 |
| FaiI | YATR | 5 cut(s) | 9, 161, 206, 275, 598 |
| FatI | CATG | 2 cut(s) | 7, 204 |
| FbaI | TGATCA | 1 cut(s) | 399 |
| FblI | GTMKAC | 2 cut(s) | 160, 507 |
| Fnu4HI | GCNGC | 2 cut(s) | 125, 225 |
| FokI | GGATG | 3 cut(s) | 273, 541, 626 |
| Fsp4HI | GCNGC | 2 cut(s) | 125, 225 |
| FspBI | CTAG | 3 cut(s) | 36, 320, 419 |
| GluI | GCNGC | 2 cut(s) | 125, 225 |
| GsuI | CTGGAG | 1 cut(s) | 357 |
| HaeIII | GGCC | 1 cut(s) | 227 |
| HgaI | GACGC | 3 cut(s) | 15, 65, 518 |
| Hin1I | GRCGYC | 1 cut(s) | 57 |
| Hin1II | CATG | 2 cut(s) | 11, 208 |
| HindIII | AAGCTT | 1 cut(s) | 80 |
| HinfI | GANTC | 3 cut(s) | 41, 408, 565 |
| Hpy166II | GTNNAC | 2 cut(s) | 161, 508 |
| Hpy188I | TCNGA | 2 cut(s) | 349, 468 |
| Hpy188III | TCNNGA | 2 cut(s) | 374, 479 |
| Hpy8I | GTNNAC | 2 cut(s) | 161, 508 |
| Hpy99I | CGWCG | 1 cut(s) | 59 |
| HpyAV | CCTTC | 3 cut(s) | 245, 428, 502 |
| HpyCH4III | ACNGT | 2 cut(s) | 302, 623 |
| HpyCH4V | TGCA | 7 cut(s) | 11, 78, 204, 332, 414, 487, 542 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 88, 124, 420 |
| HpyF3I | CTNAG | 3 cut(s) | 100, 239, 346 |
| Hsp92I | GRCGYC | 1 cut(s) | 57 |
| Hsp92II | CATG | 2 cut(s) | 11, 208 |
| Ksp22I | TGATCA | 1 cut(s) | 399 |
| KspI | CCGCGG | 1 cut(s) | 225 |
| Kzo9I | GATC | 2 cut(s) | 3, 399 |
| LguI | GCTCTTC | 1 cut(s) | 125 |
| LmnI | GCTCC | 1 cut(s) | 376 |
| LpnPI | CCDG | 7 cut(s) | 2, 30, 81, 88, 173, 387, 492 |
| Lsp1109I | GCAGC | 1 cut(s) | 136 |
| LweI | GCATC | 5 cut(s) | 61, 127, 251, 319, 529 |
| MaeI | CTAG | 3 cut(s) | 36, 320, 419 |
| MaeIII | GTNAC | 2 cut(s) | 172, 382 |
| MalI | GATC | 2 cut(s) | 5, 401 |
| MboI | GATC | 2 cut(s) | 3, 399 |
| MboII | GAAGA | 4 cut(s) | 142, 256, 334, 372 |
| MluCI | AATT | 2 cut(s) | 576, 601 |
| MlyI | GAGTC | 2 cut(s) | 50, 417 |
| MnlI | CCTC | 8 cut(s) | 139, 143, 350, 356, 435, 517, 566, 621 |
| MroXI | GAANNNNTTC | 1 cut(s) | 341 |
| MspA1I | CMGCKG | 1 cut(s) | 224 |
| MvnI | CGCG | 1 cut(s) | 224 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 88, 124, 420 |
| NdeII | GATC | 2 cut(s) | 3, 399 |
| NlaIII | CATG | 2 cut(s) | 11, 208 |
| PciSI | GCTCTTC | 1 cut(s) | 125 |
| PdmI | GAANNNNTTC | 1 cut(s) | 341 |
| PfeI | GAWTC | 1 cut(s) | 565 |
| PkrI | GCNGC | 2 cut(s) | 126, 226 |
| PleI | GAGTC | 2 cut(s) | 49, 416 |
| PpsI | GAGTC | 2 cut(s) | 49, 416 |
| RsaI | GTAC | 1 cut(s) | 439 |
| RsaNI | GTAC | 1 cut(s) | 438 |
| SacII | CCGCGG | 1 cut(s) | 225 |
| SapI | GCTCTTC | 1 cut(s) | 125 |
| SatI | GCNGC | 2 cut(s) | 125, 225 |
| Sau3AI | GATC | 2 cut(s) | 3, 399 |
| SchI | GAGTC | 2 cut(s) | 50, 417 |
| SfaNI | GCATC | 5 cut(s) | 61, 127, 251, 319, 529 |
| SfcI | CTRYAG | 2 cut(s) | 283, 619 |
| Sfr303I | CCGCGG | 1 cut(s) | 225 |
| SgrBI | CCGCGG | 1 cut(s) | 225 |
| SpeI | ACTAGT | 1 cut(s) | 319 |
| Sse9I | AATT | 2 cut(s) | 576, 601 |
| SsiI | CCGC | 2 cut(s) | 222, 224 |
| SspMI | CTAG | 3 cut(s) | 36, 320, 419 |
| StyI | CCWWGG | 1 cut(s) | 584 |
| TaaI | ACNGT | 2 cut(s) | 302, 623 |
| TaqI | TCGA | 1 cut(s) | 537 |
| TasI | AATT | 2 cut(s) | 576, 601 |
| TauI | GCSGC | 1 cut(s) | 227 |
| TfiI | GAWTC | 1 cut(s) | 565 |
| TscAI | CASTG | 2 cut(s) | 192, 628 |
| TseI | GCWGC | 1 cut(s) | 124 |
| TspDTI | ATGAA | 2 cut(s) | 350, 468 |
| TspRI | CASTG | 2 cut(s) | 192, 628 |
| XmiI | GTMKAC | 2 cut(s) | 160, 507 |
| XmnI | GAANNNNTTC | 1 cut(s) | 341 |
| XspI | CTAG | 3 cut(s) | 36, 320, 419 |