Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 701 |
| Acc36I | ACCTGC | 1 cut(s) | 1253 |
| AccI | GTMKAC | 1 cut(s) | 930 |
| AciI | CCGC | 4 cut(s) | 19, 536, 680, 1577 |
| AclWI | GGATC | 3 cut(s) | 998, 1503, 1790 |
| AcoI | YGGCCR | 2 cut(s) | 327, 1312 |
| AcsI | RAATTY | 1 cut(s) | 455 |
| AcuI | CTGAAG | 2 cut(s) | 26, 255 |
| AfaI | GTAC | 3 cut(s) | 1022, 1363, 1707 |
| AflIII | ACRYGT | 1 cut(s) | 1131 |
| AhlI | ACTAGT | 3 cut(s) | 610, 742, 1210 |
| AluBI | AGCT | 6 cut(s) | 29, 650, 860, 1156, 1307, 1472 |
| AluI | AGCT | 6 cut(s) | 29, 650, 860, 1156, 1307, 1472 |
| Alw26I | GTCTC | 2 cut(s) | 189, 1203 |
| AlwI | GGATC | 3 cut(s) | 998, 1503, 1790 |
| AoxI | GGCC | 5 cut(s) | 266, 327, 1173, 1312, 1354 |
| ApeKI | GCWGC | 3 cut(s) | 29, 32, 647 |
| ApoI | RAATTY | 1 cut(s) | 455 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 283, 315 |
| AseI | ATTAAT | 1 cut(s) | 1560 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1336, 1602 |
| AsuHPI | GGTGA | 3 cut(s) | 192, 647, 895 |
| AsuII | TTCGAA | 3 cut(s) | 149, 1330, 1714 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 729, 762 |
| BalI | TGGCCA | 1 cut(s) | 1314 |
| BanII | GRGCYC | 1 cut(s) | 1106 |
| BbsI | GAAGAC | 1 cut(s) | 74 |
| BbvI | GCAGC | 3 cut(s) | 16, 19, 659 |
| BccI | CCATC | 9 cut(s) | 54, 664, 1031, 1102, 1241, 1346, 1399, 1634, 1696 |
| BceAI | ACGGC | 2 cut(s) | 314, 526 |
| BciVI | GTATCC | 2 cut(s) | 730, 1270 |
| BclI | TGATCA | 1 cut(s) | 504 |
| BcoDI | GTCTC | 2 cut(s) | 189, 1203 |
| BcuI | ACTAGT | 3 cut(s) | 610, 742, 1210 |
| BfaI | CTAG | 6 cut(s) | 179, 611, 698, 743, 1211, 1380 |
| BfmI | CTRYAG | 1 cut(s) | 1740 |
| BfuAI | ACCTGC | 1 cut(s) | 1253 |
| BfuI | GTATCC | 2 cut(s) | 730, 1270 |
| BisI | GCNGC | 3 cut(s) | 30, 33, 648 |
| BlpI | GCTNAGC | 1 cut(s) | 1094 |
| BlsI | GCNGC | 3 cut(s) | 31, 34, 649 |
| BmsI | GCATC | 6 cut(s) | 6, 214, 268, 742, 1170, 1290 |
| BpiI | GAAGAC | 1 cut(s) | 74 |
| Bpu10I | CCTNAGC | 1 cut(s) | 662 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1094 |
| Bpu14I | TTCGAA | 3 cut(s) | 149, 1330, 1714 |
| BpuEI | CTTGAG | 1 cut(s) | 542 |
| BsaAI | YACGTR | 1 cut(s) | 1020 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1002 |
| BsaJI | CCNNGG | 2 cut(s) | 263, 1666 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 55, 77, 85, 107 |
| Bse1I | ACTGG | 2 cut(s) | 188, 1353 |
| Bse3DI | GCAATG | 1 cut(s) | 1392 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1002 |
| BseDI | CCNNGG | 2 cut(s) | 263, 1666 |
| BseGI | GGATG | 8 cut(s) | 229, 259, 815, 1042, 1252, 1357, 1674, 1792 |
| BseJI | GATNNNNATC | 1 cut(s) | 1002 |
| BseMI | GCAATG | 1 cut(s) | 1392 |
| BseMII | CTCAG | 2 cut(s) | 783, 1287 |
| BseNI | ACTGG | 2 cut(s) | 188, 1353 |
| BseRI | GAGGAG | 2 cut(s) | 81, 1068 |
| BseX3I | CGGCCG | 1 cut(s) | 327 |
| BseXI | GCAGC | 3 cut(s) | 16, 19, 659 |
| BsgI | GTGCAG | 1 cut(s) | 666 |
| Bsh1285I | CGRYCG | 1 cut(s) | 330 |
| BshFI | GGCC | 5 cut(s) | 268, 329, 1175, 1314, 1356 |
| BsiEI | CGRYCG | 1 cut(s) | 330 |
| BslFI | GGGAC | 1 cut(s) | 1221 |
| BsmAI | GTCTC | 2 cut(s) | 189, 1203 |
| BsmFI | GGGAC | 1 cut(s) | 1221 |
| BsmI | GAATGC | 1 cut(s) | 252 |
| BsnI | GGCC | 5 cut(s) | 268, 329, 1175, 1314, 1356 |
| Bsp119I | TTCGAA | 3 cut(s) | 149, 1330, 1714 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1106 |
| Bsp1407I | TGTACA | 1 cut(s) | 1361 |
| Bsp143I | GATC | 4 cut(s) | 504, 1003, 1495, 1795 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1094 |
| BspACI | CCGC | 4 cut(s) | 19, 536, 680, 1577 |
| BspANI | GGCC | 5 cut(s) | 268, 329, 1175, 1314, 1356 |
| BspCNI | CTCAG | 2 cut(s) | 782, 1288 |
| BspMAI | CTGCAG | 1 cut(s) | 1744 |
| BspMI | ACCTGC | 1 cut(s) | 1253 |
| BspPI | GGATC | 3 cut(s) | 998, 1503, 1790 |
| BspT104I | TTCGAA | 3 cut(s) | 149, 1330, 1714 |
| BsrDI | GCAATG | 1 cut(s) | 1392 |
| BsrGI | TGTACA | 1 cut(s) | 1361 |
| BsrI | ACTGG | 2 cut(s) | 188, 1353 |
| BssECI | CCNNGG | 2 cut(s) | 263, 1666 |
| BssMI | GATC | 4 cut(s) | 504, 1003, 1495, 1795 |
| Bst4CI | ACNGT | 7 cut(s) | 644, 725, 1015, 1046, 1225, 1779, 1830 |
| Bst6I | CTCTTC | 2 cut(s) | 770, 1245 |
| BstAUI | TGTACA | 1 cut(s) | 1361 |
| BstBAI | YACGTR | 1 cut(s) | 1020 |
| BstBI | TTCGAA | 3 cut(s) | 149, 1330, 1714 |
| BstC8I | GCNNGC | 3 cut(s) | 689, 1305, 1579 |
| BstDEI | CTNAG | 4 cut(s) | 662, 769, 1094, 1296 |
| BstF5I | GGATG | 8 cut(s) | 229, 259, 815, 1042, 1252, 1357, 1674, 1792 |
| BstKTI | GATC | 4 cut(s) | 507, 1006, 1498, 1798 |
| BstMAI | GTCTC | 2 cut(s) | 189, 1203 |
| BstMBI | GATC | 4 cut(s) | 504, 1003, 1495, 1795 |
| BstMCI | CGRYCG | 1 cut(s) | 330 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 256, 265, 542, 843 |
| BstSFI | CTRYAG | 1 cut(s) | 1740 |
| BstSNI | TACGTA | 1 cut(s) | 1020 |
| BstV1I | GCAGC | 3 cut(s) | 16, 19, 659 |
| BstV2I | GAAGAC | 1 cut(s) | 74 |
| BstX2I | RGATCY | 2 cut(s) | 1495, 1795 |
| BstYI | RGATCY | 2 cut(s) | 1495, 1795 |
| BstZI | CGGCCG | 1 cut(s) | 327 |
| BsuI | GTATCC | 2 cut(s) | 730, 1270 |
| BsuRI | GGCC | 5 cut(s) | 268, 329, 1175, 1314, 1356 |
| BtgZI | GCGATG | 1 cut(s) | 1715 |
| BtsCI | GGATG | 8 cut(s) | 229, 259, 815, 1042, 1252, 1357, 1674, 1792 |
| BtsIMutI | CAGTG | 2 cut(s) | 195, 1826 |
| BveI | ACCTGC | 1 cut(s) | 1253 |
| Cac8I | GCNNGC | 3 cut(s) | 689, 1305, 1579 |
| CseI | GACGC | 1 cut(s) | 910 |
| Csp6I | GTAC | 3 cut(s) | 1021, 1362, 1706 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 85, 120 |
| CviAII | CATG | 4 cut(s) | 374, 628, 1033, 1177 |
| CviQI | GTAC | 3 cut(s) | 1021, 1362, 1706 |
| DdeI | CTNAG | 4 cut(s) | 662, 769, 1094, 1296 |
| DpnI | GATC | 4 cut(s) | 506, 1005, 1497, 1797 |
| DpnII | GATC | 4 cut(s) | 504, 1003, 1495, 1795 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 701 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 701 |
| EaeI | YGGCCR | 2 cut(s) | 327, 1312 |
| EagI | CGGCCG | 1 cut(s) | 327 |
| Eam1104I | CTCTTC | 2 cut(s) | 770, 1245 |
| EarI | CTCTTC | 2 cut(s) | 770, 1245 |
| EciI | GGCGGA | 1 cut(s) | 551 |
| EclXI | CGGCCG | 1 cut(s) | 327 |
| Eco105I | TACGTA | 1 cut(s) | 1020 |
| Eco24I | GRGCYC | 1 cut(s) | 1106 |
| Eco52I | CGGCCG | 1 cut(s) | 327 |
| Eco57I | CTGAAG | 2 cut(s) | 26, 255 |
| EcoT22I | ATGCAT | 2 cut(s) | 261, 757 |
| EcoT38I | GRGCYC | 1 cut(s) | 1106 |
| FaeI | CATG | 4 cut(s) | 377, 631, 1036, 1180 |
| FaqI | GGGAC | 1 cut(s) | 1221 |
| FatI | CATG | 4 cut(s) | 373, 627, 1032, 1176 |
| FauI | CCCGC | 1 cut(s) | 1570 |
| FbaI | TGATCA | 1 cut(s) | 504 |
| FblI | GTMKAC | 1 cut(s) | 930 |
| Fnu4HI | GCNGC | 3 cut(s) | 30, 33, 648 |
| FokI | GGATG | 8 cut(s) | 236, 246, 802, 1049, 1259, 1364, 1661, 1799 |
| FriOI | GRGCYC | 1 cut(s) | 1106 |
| Fsp4HI | GCNGC | 3 cut(s) | 30, 33, 648 |
| FspBI | CTAG | 6 cut(s) | 179, 611, 698, 743, 1211, 1380 |
| GluI | GCNGC | 3 cut(s) | 30, 33, 648 |
| HaeIII | GGCC | 5 cut(s) | 268, 329, 1175, 1314, 1356 |
| HgaI | GACGC | 1 cut(s) | 910 |
| Hin1II | CATG | 4 cut(s) | 377, 631, 1036, 1180 |
| HindIII | AAGCTT | 2 cut(s) | 1154, 1305 |
| HinfI | GANTC | 4 cut(s) | 197, 988, 1484, 1566 |
| HphI | GGTGA | 3 cut(s) | 192, 647, 895 |
| Hpy166II | GTNNAC | 4 cut(s) | 912, 931, 1023, 1362 |
| Hpy188I | TCNGA | 5 cut(s) | 57, 504, 772, 1297, 1667 |
| Hpy188III | TCNNGA | 8 cut(s) | 363, 473, 521, 902, 1007, 1190, 1244, 1637 |
| Hpy8I | GTNNAC | 4 cut(s) | 912, 931, 1023, 1362 |
| HpyAV | CCTTC | 7 cut(s) | 156, 279, 502, 962, 1451, 1723, 1777 |
| HpyCH4III | ACNGT | 7 cut(s) | 644, 725, 1015, 1046, 1225, 1779, 1830 |
| HpyCH4IV | ACGT | 3 cut(s) | 914, 1019, 1133 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 256, 265, 542, 843 |
| HpyF3I | CTNAG | 4 cut(s) | 662, 769, 1094, 1296 |
| HpySE526I | ACGT | 3 cut(s) | 914, 1019, 1133 |
| Hsp92II | CATG | 4 cut(s) | 377, 631, 1036, 1180 |
| Ksp22I | TGATCA | 1 cut(s) | 504 |
| Kzo9I | GATC | 4 cut(s) | 504, 1003, 1495, 1795 |
| LmnI | GCTCC | 1 cut(s) | 255 |
| Lsp1109I | GCAGC | 3 cut(s) | 16, 19, 659 |
| LweI | GCATC | 6 cut(s) | 6, 214, 268, 742, 1170, 1290 |
| MaeI | CTAG | 6 cut(s) | 179, 611, 698, 743, 1211, 1380 |
| MaeII | ACGT | 3 cut(s) | 914, 1019, 1133 |
| MaeIII | GTNAC | 8 cut(s) | 304, 595, 635, 1015, 1040, 1124, 1225, 1582 |
| MalI | GATC | 4 cut(s) | 506, 1005, 1497, 1797 |
| MboI | GATC | 4 cut(s) | 504, 1003, 1495, 1795 |
| MboII | GAAGA | 8 cut(s) | 19, 74, 451, 509, 679, 757, 1232, 1426 |
| MfeI | CAATTG | 2 cut(s) | 656, 1391 |
| MflI | RGATCY | 2 cut(s) | 1495, 1795 |
| MhlI | GDGCHC | 1 cut(s) | 1106 |
| MlsI | TGGCCA | 1 cut(s) | 1314 |
| MluNI | TGGCCA | 1 cut(s) | 1314 |
| MlyI | GAGTC | 2 cut(s) | 191, 1560 |
| MmeI | TCCRAC | 2 cut(s) | 35, 1401 |
| Mox20I | TGGCCA | 1 cut(s) | 1314 |
| Mph1103I | ATGCAT | 2 cut(s) | 261, 757 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1336, 1602 |
| MscI | TGGCCA | 1 cut(s) | 1314 |
| MseI | TTAA | 5 cut(s) | 758, 1113, 1158, 1560, 1770 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1553 |
| Msp20I | TGGCCA | 1 cut(s) | 1314 |
| MunI | CAATTG | 2 cut(s) | 656, 1391 |
| Mva1269I | GAATGC | 1 cut(s) | 252 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 256, 265, 542, 843 |
| NdeII | GATC | 4 cut(s) | 504, 1003, 1495, 1795 |
| NlaIII | CATG | 4 cut(s) | 377, 631, 1036, 1180 |
| NmeAIII | GCCGAG | 2 cut(s) | 244, 305 |
| NmuCI | GTSAC | 1 cut(s) | 635 |
| NsiI | ATGCAT | 2 cut(s) | 261, 757 |
| NspV | TTCGAA | 3 cut(s) | 149, 1330, 1714 |
| PctI | GAATGC | 1 cut(s) | 252 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1336, 1602 |
| PfeI | GAWTC | 2 cut(s) | 988, 1484 |
| PkrI | GCNGC | 3 cut(s) | 31, 34, 649 |
| PleI | GAGTC | 2 cut(s) | 191, 1560 |
| PpsI | GAGTC | 2 cut(s) | 191, 1560 |
| Ppu21I | YACGTR | 1 cut(s) | 1020 |
| PshBI | ATTAAT | 1 cut(s) | 1560 |
| PstI | CTGCAG | 1 cut(s) | 1744 |
| PsuI | RGATCY | 2 cut(s) | 1495, 1795 |
| RsaI | GTAC | 3 cut(s) | 1022, 1363, 1707 |
| RsaNI | GTAC | 3 cut(s) | 1021, 1362, 1706 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1553 |
| SaqAI | TTAA | 5 cut(s) | 758, 1113, 1158, 1560, 1770 |
| SatI | GCNGC | 3 cut(s) | 30, 33, 648 |
| Sau3AI | GATC | 4 cut(s) | 504, 1003, 1495, 1795 |
| SchI | GAGTC | 2 cut(s) | 191, 1560 |
| SduI | GDGCHC | 1 cut(s) | 1106 |
| SfaNI | GCATC | 6 cut(s) | 6, 214, 268, 742, 1170, 1290 |
| SfcI | CTRYAG | 1 cut(s) | 1740 |
| SfuI | TTCGAA | 3 cut(s) | 149, 1330, 1714 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1553 |
| SmlI | CTYRAG | 1 cut(s) | 521 |
| SmoI | CTYRAG | 1 cut(s) | 521 |
| SnaBI | TACGTA | 1 cut(s) | 1020 |
| SpeI | ACTAGT | 3 cut(s) | 610, 742, 1210 |
| SsiI | CCGC | 4 cut(s) | 19, 536, 680, 1577 |
| SspI | AATATT | 2 cut(s) | 294, 1447 |
| SspMI | CTAG | 6 cut(s) | 179, 611, 698, 743, 1211, 1380 |
| TaaI | ACNGT | 7 cut(s) | 644, 725, 1015, 1046, 1225, 1779, 1830 |
| TaiI | ACGT | 3 cut(s) | 917, 1022, 1136 |
| TatI | WGTACW | 1 cut(s) | 1361 |
| TfiI | GAWTC | 2 cut(s) | 988, 1484 |
| Tru1I | TTAA | 5 cut(s) | 758, 1113, 1158, 1560, 1770 |
| Tru9I | TTAA | 5 cut(s) | 758, 1113, 1158, 1560, 1770 |
| TscAI | CASTG | 2 cut(s) | 195, 1833 |
| TseFI | GTSAC | 1 cut(s) | 635 |
| TseI | GCWGC | 3 cut(s) | 29, 32, 647 |
| Tsp45I | GTSAC | 1 cut(s) | 635 |
| TspDTI | ATGAA | 4 cut(s) | 839, 891, 1663, 1803 |
| TspGWI | ACGGA | 1 cut(s) | 1772 |
| TspRI | CASTG | 2 cut(s) | 195, 1833 |
| VspI | ATTAAT | 1 cut(s) | 1560 |
| XapI | RAATTY | 1 cut(s) | 455 |
| XmiI | GTMKAC | 1 cut(s) | 930 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1336, 1602 |
| XspI | CTAG | 6 cut(s) | 179, 611, 698, 743, 1211, 1380 |
| Zsp2I | ATGCAT | 2 cut(s) | 261, 757 |