Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 906, 987 |
| AatII | GACGTC | 1 cut(s) | 135 |
| Acc36I | ACCTGC | 1 cut(s) | 212 |
| AciI | CCGC | 2 cut(s) | 296, 614 |
| AclWI | GGATC | 1 cut(s) | 1439 |
| AcsI | RAATTY | 1 cut(s) | 198 |
| AcyI | GRCGYC | 1 cut(s) | 132 |
| AfaI | GTAC | 1 cut(s) | 1297 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 382 |
| AjnI | CCWGG | 1 cut(s) | 1430 |
| AluBI | AGCT | 5 cut(s) | 509, 859, 1121, 1244, 1319 |
| AluI | AGCT | 5 cut(s) | 509, 859, 1121, 1244, 1319 |
| Alw26I | GTCTC | 1 cut(s) | 1331 |
| AlwI | GGATC | 1 cut(s) | 1439 |
| AoxI | GGCC | 3 cut(s) | 822, 1003, 1228 |
| ApeKI | GCWGC | 1 cut(s) | 191 |
| ApoI | RAATTY | 1 cut(s) | 198 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1359 |
| AsuHPI | GGTGA | 5 cut(s) | 130, 196, 244, 544, 553 |
| AxyI | CCTNAGG | 1 cut(s) | 186 |
| BanII | GRGCYC | 1 cut(s) | 755 |
| BbsI | GAAGAC | 2 cut(s) | 113, 127 |
| BbvI | GCAGC | 1 cut(s) | 178 |
| BccI | CCATC | 7 cut(s) | 208, 313, 371, 595, 890, 995, 1283 |
| BceAI | ACGGC | 2 cut(s) | 48, 175 |
| BciT130I | CCWGG | 1 cut(s) | 1432 |
| BciVI | GTATCC | 1 cut(s) | 1429 |
| BcoDI | GTCTC | 1 cut(s) | 1331 |
| BfaI | CTAG | 2 cut(s) | 1037, 1076 |
| BfmI | CTRYAG | 2 cut(s) | 1029, 1389 |
| BfuAI | ACCTGC | 1 cut(s) | 212 |
| BfuI | GTATCC | 1 cut(s) | 1429 |
| BglII | AGATCT | 1 cut(s) | 1144 |
| BisI | GCNGC | 2 cut(s) | 192, 297 |
| BlpI | GCTNAGC | 1 cut(s) | 743 |
| BlsI | GCNGC | 2 cut(s) | 193, 298 |
| Bme1390I | CCNGG | 1 cut(s) | 1432 |
| BmiI | GGNNCC | 1 cut(s) | 754 |
| BmrFI | CCNGG | 1 cut(s) | 1432 |
| BmsI | GCATC | 5 cut(s) | 323, 939, 1180, 1384, 1406 |
| BpiI | GAAGAC | 2 cut(s) | 113, 127 |
| BpmI | CTGGAG | 1 cut(s) | 1269 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 743 |
| Bsa29I | ATCGAT | 1 cut(s) | 816 |
| BsaHI | GRCGYC | 1 cut(s) | 132 |
| BsaJI | CCNNGG | 2 cut(s) | 756, 1431 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 382 |
| Bse1I | ACTGG | 2 cut(s) | 496, 825 |
| Bse21I | CCTNAGG | 1 cut(s) | 186 |
| BseBI | CCWGG | 1 cut(s) | 1432 |
| BseCI | ATCGAT | 1 cut(s) | 816 |
| BseDI | CCNNGG | 2 cut(s) | 756, 1431 |
| BseGI | GGATG | 4 cut(s) | 244, 338, 606, 1171 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 382 |
| BseMII | CTCAG | 6 cut(s) | 177, 325, 432, 757, 936, 1060 |
| BseNI | ACTGG | 2 cut(s) | 496, 825 |
| BseRI | GAGGAG | 1 cut(s) | 717 |
| BseXI | GCAGC | 1 cut(s) | 178 |
| BseYI | CCCAGC | 1 cut(s) | 1121 |
| BsgI | GTGCAG | 1 cut(s) | 177 |
| BshFI | GGCC | 3 cut(s) | 824, 1005, 1230 |
| BshVI | ATCGAT | 1 cut(s) | 816 |
| BsiSI | CCGG | 1 cut(s) | 236 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 382 |
| BsmAI | GTCTC | 1 cut(s) | 1331 |
| BsmI | GAATGC | 1 cut(s) | 404 |
| BsnI | GGCC | 3 cut(s) | 824, 1005, 1230 |
| Bsp1286I | GDGCHC | 1 cut(s) | 755 |
| Bsp143I | GATC | 5 cut(s) | 279, 733, 813, 1144, 1444 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 743 |
| BspACI | CCGC | 2 cut(s) | 296, 614 |
| BspANI | GGCC | 3 cut(s) | 824, 1005, 1230 |
| BspCNI | CTCAG | 6 cut(s) | 178, 324, 431, 756, 937, 1059 |
| BspDI | ATCGAT | 1 cut(s) | 816 |
| BspHI | TCATGA | 1 cut(s) | 1363 |
| BspLI | GGNNCC | 1 cut(s) | 754 |
| BspMAI | CTGCAG | 1 cut(s) | 1393 |
| BspMI | ACCTGC | 1 cut(s) | 212 |
| BspPI | GGATC | 1 cut(s) | 1439 |
| BsrI | ACTGG | 2 cut(s) | 496, 825 |
| BssECI | CCNNGG | 2 cut(s) | 756, 1431 |
| BssMI | GATC | 5 cut(s) | 279, 733, 813, 1144, 1444 |
| BssNI | GRCGYC | 1 cut(s) | 132 |
| BssT1I | CCWWGG | 1 cut(s) | 756 |
| Bst2UI | CCWGG | 1 cut(s) | 1432 |
| Bst4CI | ACNGT | 6 cut(s) | 451, 590, 689, 695, 1334, 1441 |
| Bst6I | CTCTTC | 2 cut(s) | 419, 1154 |
| BstACI | GRCGYC | 1 cut(s) | 132 |
| BstC8I | GCNNGC | 1 cut(s) | 338 |
| BstDEI | CTNAG | 7 cut(s) | 186, 231, 311, 418, 743, 945, 1046 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 380 |
| BstF5I | GGATG | 4 cut(s) | 244, 338, 606, 1171 |
| BstKTI | GATC | 5 cut(s) | 282, 736, 816, 1147, 1447 |
| BstMAI | GTCTC | 1 cut(s) | 1331 |
| BstMBI | GATC | 5 cut(s) | 279, 733, 813, 1144, 1444 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 492 |
| BstNI | CCWGG | 1 cut(s) | 1432 |
| BstSCI | CCNGG | 1 cut(s) | 1430 |
| BstSFI | CTRYAG | 2 cut(s) | 1029, 1389 |
| BstV1I | GCAGC | 1 cut(s) | 178 |
| BstV2I | GAAGAC | 2 cut(s) | 113, 127 |
| BstX2I | RGATCY | 2 cut(s) | 1144, 1444 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 214 |
| BstYI | RGATCY | 2 cut(s) | 1144, 1444 |
| Bsu15I | ATCGAT | 1 cut(s) | 816 |
| Bsu36I | CCTNAGG | 1 cut(s) | 186 |
| BsuI | GTATCC | 1 cut(s) | 1429 |
| BsuRI | GGCC | 3 cut(s) | 824, 1005, 1230 |
| BsuTUI | ATCGAT | 1 cut(s) | 816 |
| BtsCI | GGATG | 4 cut(s) | 244, 338, 606, 1171 |
| BtsI | GCAGTG | 1 cut(s) | 291 |
| BtsIMutI | CAGTG | 3 cut(s) | 291, 503, 1339 |
| BveI | ACCTGC | 1 cut(s) | 212 |
| Cac8I | GCNNGC | 1 cut(s) | 338 |
| CciI | TCATGA | 1 cut(s) | 1363 |
| ClaI | ATCGAT | 1 cut(s) | 816 |
| CseI | GACGC | 1 cut(s) | 1201 |
| Csp6I | GTAC | 1 cut(s) | 1296 |
| CviAII | CATG | 3 cut(s) | 631, 1364, 1461 |
| CviQI | GTAC | 1 cut(s) | 1296 |
| DdeI | CTNAG | 7 cut(s) | 186, 231, 311, 418, 743, 945, 1046 |
| DpnI | GATC | 5 cut(s) | 281, 735, 815, 1146, 1446 |
| DpnII | GATC | 5 cut(s) | 279, 733, 813, 1144, 1444 |
| Eam1104I | CTCTTC | 2 cut(s) | 419, 1154 |
| EarI | CTCTTC | 2 cut(s) | 419, 1154 |
| Eco130I | CCWWGG | 1 cut(s) | 756 |
| Eco147I | AGGCCT | 1 cut(s) | 1230 |
| Eco24I | GRGCYC | 1 cut(s) | 755 |
| Eco32I | GATATC | 1 cut(s) | 661 |
| Eco81I | CCTNAGG | 1 cut(s) | 186 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 380 |
| EcoRII | CCWGG | 1 cut(s) | 1430 |
| EcoRV | GATATC | 1 cut(s) | 661 |
| EcoT14I | CCWWGG | 1 cut(s) | 756 |
| EcoT22I | ATGCAT | 1 cut(s) | 1399 |
| EcoT38I | GRGCYC | 1 cut(s) | 755 |
| ErhI | CCWWGG | 1 cut(s) | 756 |
| FaeI | CATG | 3 cut(s) | 634, 1367, 1464 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 740, 772 |
| FatI | CATG | 3 cut(s) | 630, 1363, 1460 |
| Fnu4HI | GCNGC | 2 cut(s) | 192, 297 |
| FokI | GGATG | 4 cut(s) | 251, 345, 613, 1158 |
| FriOI | GRGCYC | 1 cut(s) | 755 |
| Fsp4HI | GCNGC | 2 cut(s) | 192, 297 |
| FspBI | CTAG | 2 cut(s) | 1037, 1076 |
| GluI | GCNGC | 2 cut(s) | 192, 297 |
| GsaI | CCCAGC | 1 cut(s) | 1125 |
| GsuI | CTGGAG | 1 cut(s) | 1269 |
| HaeIII | GGCC | 3 cut(s) | 824, 1005, 1230 |
| HapII | CCGG | 1 cut(s) | 236 |
| HgaI | GACGC | 1 cut(s) | 1201 |
| Hin1I | GRCGYC | 1 cut(s) | 132 |
| Hin1II | CATG | 3 cut(s) | 634, 1367, 1464 |
| HincII | GTYRAC | 2 cut(s) | 628, 965 |
| HindII | GTYRAC | 2 cut(s) | 628, 965 |
| HinfI | GANTC | 7 cut(s) | 70, 472, 535, 637, 1133, 1207, 1472 |
| HpaII | CCGG | 1 cut(s) | 236 |
| HphI | GGTGA | 5 cut(s) | 130, 196, 244, 544, 553 |
| Hpy166II | GTNNAC | 5 cut(s) | 628, 965, 1090, 1191, 1257 |
| Hpy188I | TCNGA | 7 cut(s) | 284, 421, 771, 946, 1049, 1316, 1481 |
| Hpy188III | TCNNGA | 6 cut(s) | 23, 313, 839, 866, 1286, 1364 |
| Hpy8I | GTNNAC | 5 cut(s) | 628, 965, 1090, 1191, 1257 |
| HpyAV | CCTTC | 7 cut(s) | 151, 320, 574, 590, 1052, 1100, 1261 |
| HpyCH4III | ACNGT | 6 cut(s) | 451, 590, 689, 695, 1334, 1441 |
| HpyCH4IV | ACGT | 1 cut(s) | 132 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 492 |
| HpyF3I | CTNAG | 7 cut(s) | 186, 231, 311, 418, 743, 945, 1046 |
| HpySE526I | ACGT | 1 cut(s) | 132 |
| Hsp92I | GRCGYC | 1 cut(s) | 132 |
| Hsp92II | CATG | 3 cut(s) | 634, 1367, 1464 |
| Kzo9I | GATC | 5 cut(s) | 279, 733, 813, 1144, 1444 |
| LmnI | GCTCC | 3 cut(s) | 448, 758, 856 |
| Lsp1109I | GCAGC | 1 cut(s) | 178 |
| LweI | GCATC | 5 cut(s) | 323, 939, 1180, 1384, 1406 |
| MaeI | CTAG | 2 cut(s) | 1037, 1076 |
| MaeII | ACGT | 1 cut(s) | 132 |
| MaeIII | GTNAC | 6 cut(s) | 244, 454, 559, 689, 776, 1010 |
| MalI | GATC | 5 cut(s) | 281, 735, 815, 1146, 1446 |
| MboI | GATC | 5 cut(s) | 279, 733, 813, 1144, 1444 |
| MboII | GAAGA | 7 cut(s) | 100, 113, 127, 328, 335, 406, 1141 |
| MflI | RGATCY | 2 cut(s) | 1144, 1444 |
| MhlI | GDGCHC | 1 cut(s) | 755 |
| MlyI | GAGTC | 1 cut(s) | 544 |
| MmeI | TCCRAC | 2 cut(s) | 470, 1050 |
| Mph1103I | ATGCAT | 1 cut(s) | 1399 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1359 |
| MseI | TTAA | 5 cut(s) | 39, 789, 882, 1235, 1467 |
| MslI | CAYNNNNRTG | 1 cut(s) | 209 |
| MspI | CCGG | 1 cut(s) | 236 |
| MspR9I | CCNGG | 1 cut(s) | 1432 |
| Mva1269I | GAATGC | 1 cut(s) | 404 |
| MvaI | CCWGG | 1 cut(s) | 1432 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 492 |
| NdeII | GATC | 5 cut(s) | 279, 733, 813, 1144, 1444 |
| NlaIII | CATG | 3 cut(s) | 634, 1367, 1464 |
| NlaIV | GGNNCC | 1 cut(s) | 754 |
| NmuCI | GTSAC | 1 cut(s) | 559 |
| NsiI | ATGCAT | 1 cut(s) | 1399 |
| PagI | TCATGA | 1 cut(s) | 1363 |
| PceI | AGGCCT | 1 cut(s) | 1230 |
| PctI | GAATGC | 1 cut(s) | 404 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1359 |
| PfeI | GAWTC | 6 cut(s) | 70, 472, 637, 1133, 1207, 1472 |
| PkrI | GCNGC | 2 cut(s) | 193, 298 |
| PleI | GAGTC | 1 cut(s) | 543 |
| PpsI | GAGTC | 1 cut(s) | 543 |
| PsiI | TTATAA | 2 cut(s) | 906, 987 |
| Psp6I | CCWGG | 1 cut(s) | 1430 |
| PspFI | CCCAGC | 1 cut(s) | 1121 |
| PspGI | CCWGG | 1 cut(s) | 1430 |
| PspN4I | GGNNCC | 1 cut(s) | 754 |
| PstI | CTGCAG | 1 cut(s) | 1393 |
| PsuI | RGATCY | 2 cut(s) | 1144, 1444 |
| RsaI | GTAC | 1 cut(s) | 1297 |
| RsaNI | GTAC | 1 cut(s) | 1296 |
| RseI | CAYNNNNRTG | 1 cut(s) | 209 |
| SaqAI | TTAA | 5 cut(s) | 39, 789, 882, 1235, 1467 |
| SatI | GCNGC | 2 cut(s) | 192, 297 |
| Sau3AI | GATC | 5 cut(s) | 279, 733, 813, 1144, 1444 |
| SchI | GAGTC | 1 cut(s) | 544 |
| ScrFI | CCNGG | 1 cut(s) | 1432 |
| SduI | GDGCHC | 1 cut(s) | 755 |
| SfaNI | GCATC | 5 cut(s) | 323, 939, 1180, 1384, 1406 |
| SfcI | CTRYAG | 2 cut(s) | 1029, 1389 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 209 |
| SseBI | AGGCCT | 1 cut(s) | 1230 |
| SsiI | CCGC | 2 cut(s) | 296, 614 |
| SspI | AATATT | 1 cut(s) | 991 |
| SspMI | CTAG | 2 cut(s) | 1037, 1076 |
| StuI | AGGCCT | 1 cut(s) | 1230 |
| StyD4I | CCNGG | 1 cut(s) | 1430 |
| StyI | CCWWGG | 1 cut(s) | 756 |
| TaaI | ACNGT | 6 cut(s) | 451, 590, 689, 695, 1334, 1441 |
| TaiI | ACGT | 1 cut(s) | 135 |
| TaqI | TCGA | 3 cut(s) | 13, 538, 816 |
| TauI | GCSGC | 1 cut(s) | 299 |
| TfiI | GAWTC | 6 cut(s) | 70, 472, 637, 1133, 1207, 1472 |
| Tru1I | TTAA | 5 cut(s) | 39, 789, 882, 1235, 1467 |
| Tru9I | TTAA | 5 cut(s) | 39, 789, 882, 1235, 1467 |
| TscAI | CASTG | 3 cut(s) | 298, 503, 1339 |
| TseFI | GTSAC | 1 cut(s) | 559 |
| TseI | GCWGC | 1 cut(s) | 191 |
| Tsp45I | GTSAC | 1 cut(s) | 559 |
| TspDTI | ATGAA | 6 cut(s) | 414, 540, 1280, 1340, 1352, 1380 |
| TspGWI | ACGGA | 1 cut(s) | 807 |
| TspRI | CASTG | 3 cut(s) | 298, 503, 1339 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 380 |
| XapI | RAATTY | 1 cut(s) | 198 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1359 |
| XspI | CTAG | 2 cut(s) | 1037, 1076 |
| ZraI | GACGTC | 1 cut(s) | 133 |
| Zsp2I | ATGCAT | 1 cut(s) | 1399 |