Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 240, 723 |
| Acc36I | ACCTGC | 1 cut(s) | 744 |
| AccII | CGCG | 2 cut(s) | 145, 1065 |
| AccIII | TCCGGA | 1 cut(s) | 1092 |
| AciI | CCGC | 8 cut(s) | 417, 483, 591, 651, 657, 838, 1063, 1065 |
| AclWI | GGATC | 4 cut(s) | 408, 519, 582, 693 |
| AcoI | YGGCCR | 1 cut(s) | 816 |
| AcsI | RAATTY | 1 cut(s) | 1177 |
| AcuI | CTGAAG | 1 cut(s) | 137 |
| AfaI | GTAC | 1 cut(s) | 954 |
| AgsI | TTSAA | 3 cut(s) | 229, 307, 349 |
| AjnI | CCWGG | 2 cut(s) | 333, 744 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 861, 893 |
| AluBI | AGCT | 3 cut(s) | 928, 980, 988 |
| AluI | AGCT | 3 cut(s) | 928, 980, 988 |
| Alw26I | GTCTC | 9 cut(s) | 248, 372, 449, 546, 623, 731, 793, 803, 1073 |
| AlwI | GGATC | 4 cut(s) | 408, 519, 582, 693 |
| Ama87I | CYCGRG | 2 cut(s) | 383, 557 |
| Aor13HI | TCCGGA | 1 cut(s) | 1092 |
| AoxI | GGCC | 6 cut(s) | 337, 485, 518, 659, 692, 816 |
| ApeKI | GCWGC | 1 cut(s) | 928 |
| ApoI | RAATTY | 1 cut(s) | 1177 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 122, 135, 256, 954 |
| AspS9I | GGNCC | 3 cut(s) | 337, 485, 659 |
| AsuHPI | GGTGA | 6 cut(s) | 466, 640, 700, 1063, 1124, 1168 |
| AsuII | TTCGAA | 2 cut(s) | 526, 700 |
| AvaI | CYCGRG | 2 cut(s) | 383, 557 |
| BalI | TGGCCA | 1 cut(s) | 818 |
| BbvCI | CCTCAGC | 2 cut(s) | 489, 663 |
| BbvI | GCAGC | 1 cut(s) | 915 |
| BccI | CCATC | 2 cut(s) | 738, 940 |
| BceAI | ACGGC | 2 cut(s) | 533, 707 |
| BciT130I | CCWGG | 2 cut(s) | 335, 746 |
| BclI | TGATCA | 1 cut(s) | 918 |
| BcoDI | GTCTC | 9 cut(s) | 248, 372, 449, 546, 623, 731, 793, 803, 1073 |
| BfaI | CTAG | 4 cut(s) | 75, 458, 632, 714 |
| BfuAI | ACCTGC | 1 cut(s) | 744 |
| BglII | AGATCT | 1 cut(s) | 177 |
| BisI | GCNGC | 3 cut(s) | 838, 929, 1063 |
| BlpI | GCTNAGC | 1 cut(s) | 848 |
| BlsI | GCNGC | 3 cut(s) | 839, 930, 1064 |
| BmcAI | AGTACT | 1 cut(s) | 954 |
| Bme1390I | CCNGG | 2 cut(s) | 335, 746 |
| BmeT110I | CYCGRG | 2 cut(s) | 383, 557 |
| BmgT120I | GGNCC | 3 cut(s) | 337, 485, 659 |
| BmrFI | CCNGG | 2 cut(s) | 335, 746 |
| BmrI | ACTGGG | 2 cut(s) | 358, 532 |
| BmsI | GCATC | 1 cut(s) | 100 |
| BmuI | ACTGGG | 2 cut(s) | 358, 532 |
| BoxI | GACNNNNGTC | 1 cut(s) | 397 |
| BpmI | CTGGAG | 2 cut(s) | 380, 795 |
| Bpu10I | CCTNAGC | 2 cut(s) | 489, 663 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 848 |
| Bpu14I | TTCGAA | 2 cut(s) | 526, 700 |
| Bsa29I | ATCGAT | 1 cut(s) | 782 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1116 |
| BsaI | GGTCTC | 4 cut(s) | 248, 449, 623, 1073 |
| BsaJI | CCNNGG | 2 cut(s) | 334, 1063 |
| BsaWI | WCCGGW | 6 cut(s) | 1048, 1085, 1092, 1134, 1148, 1167 |
| Bse118I | RCCGGY | 3 cut(s) | 493, 667, 852 |
| Bse1I | ACTGG | 6 cut(s) | 364, 397, 538, 778, 1056, 1158 |
| Bse3DI | GCAATG | 2 cut(s) | 420, 594 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1116 |
| BseAI | TCCGGA | 1 cut(s) | 1092 |
| BseBI | CCWGG | 2 cut(s) | 335, 746 |
| BseCI | ATCGAT | 1 cut(s) | 782 |
| BseDI | CCNNGG | 2 cut(s) | 334, 1063 |
| BseGI | GGATG | 2 cut(s) | 115, 1027 |
| BseJI | GATNNNNATC | 1 cut(s) | 1116 |
| BseMI | GCAATG | 2 cut(s) | 420, 594 |
| BseMII | CTCAG | 7 cut(s) | 188, 387, 503, 561, 677, 862, 897 |
| BseNI | ACTGG | 6 cut(s) | 364, 397, 538, 778, 1056, 1158 |
| BseRI | GAGGAG | 8 cut(s) | 15, 18, 456, 459, 630, 633, 817, 820 |
| BseXI | GCAGC | 1 cut(s) | 915 |
| Bsh1236I | CGCG | 2 cut(s) | 145, 1065 |
| Bsh1285I | CGRYCG | 2 cut(s) | 786, 1079 |
| BshFI | GGCC | 6 cut(s) | 339, 487, 520, 661, 694, 818 |
| BshVI | ATCGAT | 1 cut(s) | 782 |
| BsiEI | CGRYCG | 2 cut(s) | 786, 1079 |
| BsiHKCI | CYCGRG | 2 cut(s) | 383, 557 |
| BslFI | GGGAC | 2 cut(s) | 373, 547 |
| BsmAI | GTCTC | 9 cut(s) | 248, 372, 449, 546, 623, 731, 793, 803, 1073 |
| BsmBI | CGTCTC | 2 cut(s) | 731, 793 |
| BsmFI | GGGAC | 2 cut(s) | 373, 547 |
| BsnI | GGCC | 6 cut(s) | 339, 487, 520, 661, 694, 818 |
| Bso31I | GGTCTC | 4 cut(s) | 248, 449, 623, 1073 |
| BsoBI | CYCGRG | 2 cut(s) | 383, 557 |
| Bsp119I | TTCGAA | 2 cut(s) | 526, 700 |
| Bsp13I | TCCGGA | 1 cut(s) | 1092 |
| Bsp143I | GATC | 9 cut(s) | 177, 413, 511, 587, 685, 783, 902, 918, 1111 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 848 |
| BspACI | CCGC | 8 cut(s) | 417, 483, 591, 651, 657, 838, 1063, 1065 |
| BspANI | GGCC | 6 cut(s) | 339, 487, 520, 661, 694, 818 |
| BspCNI | CTCAG | 7 cut(s) | 187, 386, 502, 560, 676, 861, 896 |
| BspDI | ATCGAT | 1 cut(s) | 782 |
| BspEI | TCCGGA | 1 cut(s) | 1092 |
| BspFNI | CGCG | 2 cut(s) | 145, 1065 |
| BspMI | ACCTGC | 1 cut(s) | 744 |
| BspPI | GGATC | 4 cut(s) | 408, 519, 582, 693 |
| BspT104I | TTCGAA | 2 cut(s) | 526, 700 |
| BspTNI | GGTCTC | 4 cut(s) | 248, 449, 623, 1073 |
| BsrDI | GCAATG | 2 cut(s) | 420, 594 |
| BsrFI | RCCGGY | 3 cut(s) | 493, 667, 852 |
| BsrI | ACTGG | 6 cut(s) | 364, 397, 538, 778, 1056, 1158 |
| BssAI | RCCGGY | 3 cut(s) | 493, 667, 852 |
| BssECI | CCNNGG | 2 cut(s) | 334, 1063 |
| BssMI | GATC | 9 cut(s) | 177, 413, 511, 587, 685, 783, 902, 918, 1111 |
| Bst2UI | CCWGG | 2 cut(s) | 335, 746 |
| Bst4CI | ACNGT | 2 cut(s) | 797, 1080 |
| BstBI | TTCGAA | 2 cut(s) | 526, 700 |
| BstC8I | GCNNGC | 6 cut(s) | 86, 485, 495, 655, 659, 669 |
| BstDEI | CTNAG | 8 cut(s) | 174, 373, 489, 547, 663, 848, 883, 984 |
| BstDSI | CCRYGG | 1 cut(s) | 1063 |
| BstEII | GGTNACC | 2 cut(s) | 1051, 1130 |
| BstF5I | GGATG | 2 cut(s) | 115, 1027 |
| BstFNI | CGCG | 2 cut(s) | 145, 1065 |
| BstKTI | GATC | 9 cut(s) | 180, 416, 514, 590, 688, 786, 905, 921, 1114 |
| BstMAI | GTCTC | 9 cut(s) | 248, 372, 449, 546, 623, 731, 793, 803, 1073 |
| BstMBI | GATC | 9 cut(s) | 177, 413, 511, 587, 685, 783, 902, 918, 1111 |
| BstMCI | CGRYCG | 2 cut(s) | 786, 1079 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 142, 151 |
| BstNI | CCWGG | 2 cut(s) | 335, 746 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 397 |
| BstPI | GGTNACC | 2 cut(s) | 1051, 1130 |
| BstSCI | CCNGG | 2 cut(s) | 333, 744 |
| BstUI | CGCG | 2 cut(s) | 145, 1065 |
| BstV1I | GCAGC | 1 cut(s) | 915 |
| BstX2I | RGATCY | 3 cut(s) | 177, 511, 685 |
| BstYI | RGATCY | 3 cut(s) | 177, 511, 685 |
| Bsu15I | ATCGAT | 1 cut(s) | 782 |
| BsuRI | GGCC | 6 cut(s) | 339, 487, 520, 661, 694, 818 |
| BsuTUI | ATCGAT | 1 cut(s) | 782 |
| BtgI | CCRYGG | 1 cut(s) | 1063 |
| BtsCI | GGATG | 2 cut(s) | 115, 1027 |
| BveI | ACCTGC | 1 cut(s) | 744 |
| Cac8I | GCNNGC | 6 cut(s) | 86, 485, 495, 655, 659, 669 |
| Cfr10I | RCCGGY | 3 cut(s) | 493, 667, 852 |
| Cfr13I | GGNCC | 3 cut(s) | 337, 485, 659 |
| Cfr42I | CCGCGG | 1 cut(s) | 1066 |
| ClaI | ATCGAT | 1 cut(s) | 782 |
| CseI | GACGC | 1 cut(s) | 134 |
| CsiI | ACCWGGT | 1 cut(s) | 744 |
| Csp6I | GTAC | 1 cut(s) | 953 |
| CviQI | GTAC | 1 cut(s) | 953 |
| DdeI | CTNAG | 8 cut(s) | 174, 373, 489, 547, 663, 848, 883, 984 |
| DpnI | GATC | 9 cut(s) | 179, 415, 513, 589, 687, 785, 904, 920, 1113 |
| DpnII | GATC | 9 cut(s) | 177, 413, 511, 587, 685, 783, 902, 918, 1111 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 240, 723 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 240, 723 |
| EaeI | YGGCCR | 1 cut(s) | 816 |
| EciI | GGCGGA | 2 cut(s) | 406, 580 |
| Eco31I | GGTCTC | 4 cut(s) | 248, 449, 623, 1073 |
| Eco57I | CTGAAG | 1 cut(s) | 137 |
| Eco88I | CYCGRG | 2 cut(s) | 383, 557 |
| Eco91I | GGTNACC | 2 cut(s) | 1051, 1130 |
| EcoO65I | GGTNACC | 2 cut(s) | 1051, 1130 |
| EcoRII | CCWGG | 2 cut(s) | 333, 744 |
| Esp3I | CGTCTC | 2 cut(s) | 731, 793 |
| FaiI | YATR | 6 cut(s) | 7, 270, 509, 683, 1044, 1200 |
| FaqI | GGGAC | 2 cut(s) | 373, 547 |
| FauI | CCCGC | 2 cut(s) | 476, 650 |
| FbaI | TGATCA | 1 cut(s) | 918 |
| Fnu4HI | GCNGC | 3 cut(s) | 838, 929, 1063 |
| FokI | GGATG | 2 cut(s) | 122, 1014 |
| Fsp4HI | GCNGC | 3 cut(s) | 838, 929, 1063 |
| FspBI | CTAG | 4 cut(s) | 75, 458, 632, 714 |
| GluI | GCNGC | 3 cut(s) | 838, 929, 1063 |
| GsuI | CTGGAG | 2 cut(s) | 380, 795 |
| HaeIII | GGCC | 6 cut(s) | 339, 487, 520, 661, 694, 818 |
| HgaI | GACGC | 1 cut(s) | 134 |
| HincII | GTYRAC | 2 cut(s) | 771, 1083 |
| HindII | GTYRAC | 2 cut(s) | 771, 1083 |
| HphI | GGTGA | 6 cut(s) | 466, 640, 700, 1063, 1124, 1168 |
| Hpy166II | GTNNAC | 2 cut(s) | 771, 1083 |
| Hpy188I | TCNGA | 9 cut(s) | 177, 251, 262, 737, 886, 892, 900, 1116, 1176 |
| Hpy188III | TCNNGA | 9 cut(s) | 75, 383, 390, 502, 557, 564, 676, 959, 1093 |
| Hpy8I | GTNNAC | 2 cut(s) | 771, 1083 |
| Hpy99I | CGWCG | 3 cut(s) | 414, 588, 726 |
| HpyAV | CCTTC | 2 cut(s) | 112, 872 |
| HpyCH4III | ACNGT | 2 cut(s) | 797, 1080 |
| HpyCH4V | TGCA | 2 cut(s) | 425, 599 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 142, 151 |
| HpyF3I | CTNAG | 8 cut(s) | 174, 373, 489, 547, 663, 848, 883, 984 |
| Kpn2I | TCCGGA | 1 cut(s) | 1092 |
| KroI | GCCGGC | 2 cut(s) | 493, 667 |
| KroNI | GCCGGC | 2 cut(s) | 495, 669 |
| Ksp22I | TGATCA | 1 cut(s) | 918 |
| KspI | CCGCGG | 1 cut(s) | 1066 |
| Kzo9I | GATC | 9 cut(s) | 177, 413, 511, 587, 685, 783, 902, 918, 1111 |
| LmnI | GCTCC | 2 cut(s) | 925, 1051 |
| Lsp1109I | GCAGC | 1 cut(s) | 915 |
| LweI | GCATC | 1 cut(s) | 100 |
| MabI | ACCWGGT | 1 cut(s) | 744 |
| MaeI | CTAG | 4 cut(s) | 75, 458, 632, 714 |
| MaeIII | GTNAC | 4 cut(s) | 1051, 1102, 1130, 1156 |
| MalI | GATC | 9 cut(s) | 179, 415, 513, 589, 687, 785, 904, 920, 1113 |
| MboI | GATC | 9 cut(s) | 177, 413, 511, 587, 685, 783, 902, 918, 1111 |
| MboII | GAAGA | 1 cut(s) | 337 |
| MfeI | CAATTG | 1 cut(s) | 289 |
| MflI | RGATCY | 3 cut(s) | 177, 511, 685 |
| MlsI | TGGCCA | 1 cut(s) | 818 |
| MluCI | AATT | 5 cut(s) | 252, 289, 341, 939, 1177 |
| MluNI | TGGCCA | 1 cut(s) | 818 |
| MlyI | GAGTC | 9 cut(s) | 387, 395, 415, 561, 569, 589, 896, 904, 956 |
| MmeI | TCCRAC | 1 cut(s) | 760 |
| Mox20I | TGGCCA | 1 cut(s) | 818 |
| MroI | TCCGGA | 1 cut(s) | 1092 |
| MroNI | GCCGGC | 2 cut(s) | 493, 667 |
| MroXI | GAANNNNTTC | 4 cut(s) | 122, 135, 256, 954 |
| MscI | TGGCCA | 1 cut(s) | 818 |
| MseI | TTAA | 1 cut(s) | 938 |
| Msp20I | TGGCCA | 1 cut(s) | 818 |
| MspA1I | CMGCKG | 1 cut(s) | 1065 |
| MspR9I | CCNGG | 2 cut(s) | 335, 746 |
| MunI | CAATTG | 1 cut(s) | 289 |
| MvaI | CCWGG | 2 cut(s) | 335, 746 |
| MvnI | CGCG | 2 cut(s) | 145, 1065 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 142, 151 |
| NaeI | GCCGGC | 2 cut(s) | 495, 669 |
| NdeII | GATC | 9 cut(s) | 177, 413, 511, 587, 685, 783, 902, 918, 1111 |
| NgoMIV | GCCGGC | 2 cut(s) | 493, 667 |
| NmuCI | GTSAC | 4 cut(s) | 1051, 1102, 1130, 1156 |
| NspV | TTCGAA | 2 cut(s) | 526, 700 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 523, 697 |
| PdiI | GCCGGC | 2 cut(s) | 495, 669 |
| PdmI | GAANNNNTTC | 4 cut(s) | 122, 135, 256, 954 |
| PfeI | GAWTC | 7 cut(s) | 307, 779, 1089, 1096, 1117, 1138, 1164 |
| PflFI | GACNNNGTC | 1 cut(s) | 720 |
| PkrI | GCNGC | 3 cut(s) | 839, 930, 1064 |
| Ple19I | CGATCG | 1 cut(s) | 786 |
| PleI | GAGTC | 9 cut(s) | 387, 394, 414, 561, 568, 588, 895, 903, 956 |
| PpsI | GAGTC | 9 cut(s) | 387, 394, 414, 561, 568, 588, 895, 903, 956 |
| PshAI | GACNNNNGTC | 1 cut(s) | 397 |
| Psp6I | CCWGG | 2 cut(s) | 333, 744 |
| PspEI | GGTNACC | 2 cut(s) | 1051, 1130 |
| PspGI | CCWGG | 2 cut(s) | 333, 744 |
| PspPI | GGNCC | 3 cut(s) | 337, 485, 659 |
| PsuI | RGATCY | 3 cut(s) | 177, 511, 685 |
| PsyI | GACNNNGTC | 1 cut(s) | 720 |
| PvuI | CGATCG | 1 cut(s) | 786 |
| RsaI | GTAC | 1 cut(s) | 954 |
| RsaNI | GTAC | 1 cut(s) | 953 |
| SacII | CCGCGG | 1 cut(s) | 1066 |
| SaqAI | TTAA | 1 cut(s) | 938 |
| SatI | GCNGC | 3 cut(s) | 838, 929, 1063 |
| Sau3AI | GATC | 9 cut(s) | 177, 413, 511, 587, 685, 783, 902, 918, 1111 |
| Sau96I | GGNCC | 3 cut(s) | 337, 485, 659 |
| ScaI | AGTACT | 1 cut(s) | 954 |
| SchI | GAGTC | 9 cut(s) | 387, 395, 415, 561, 569, 589, 896, 904, 956 |
| ScrFI | CCNGG | 2 cut(s) | 335, 746 |
| SetI | ASST | 8 cut(s) | 123, 750, 758, 930, 982, 990, 1039, 1132 |
| SexAI | ACCWGGT | 1 cut(s) | 744 |
| SfaNI | GCATC | 1 cut(s) | 100 |
| Sfr303I | CCGCGG | 1 cut(s) | 1066 |
| SfuI | TTCGAA | 2 cut(s) | 526, 700 |
| SgrBI | CCGCGG | 1 cut(s) | 1066 |
| Sse9I | AATT | 5 cut(s) | 252, 289, 341, 939, 1177 |
| SsiI | CCGC | 8 cut(s) | 417, 483, 591, 651, 657, 838, 1063, 1065 |
| SspMI | CTAG | 4 cut(s) | 75, 458, 632, 714 |
| StyD4I | CCNGG | 2 cut(s) | 333, 744 |
| TaaI | ACNGT | 2 cut(s) | 797, 1080 |
| TaqI | TCGA | 9 cut(s) | 126, 187, 404, 412, 526, 578, 586, 700, 782 |
| TaqII | GACCGA | 3 cut(s) | 431, 605, 1121 |
| TasI | AATT | 5 cut(s) | 252, 289, 341, 939, 1177 |
| TatI | WGTACW | 1 cut(s) | 952 |
| TauI | GCSGC | 2 cut(s) | 840, 1065 |
| TfiI | GAWTC | 7 cut(s) | 307, 779, 1089, 1096, 1117, 1138, 1164 |
| Tru1I | TTAA | 1 cut(s) | 938 |
| Tru9I | TTAA | 1 cut(s) | 938 |
| TseFI | GTSAC | 4 cut(s) | 1051, 1102, 1130, 1156 |
| TseI | GCWGC | 1 cut(s) | 928 |
| Tsp45I | GTSAC | 4 cut(s) | 1051, 1102, 1130, 1156 |
| TspDTI | ATGAA | 3 cut(s) | 35, 144, 927 |
| TspGWI | ACGGA | 1 cut(s) | 155 |
| Tth111I | GACNNNGTC | 1 cut(s) | 720 |
| XapI | RAATTY | 1 cut(s) | 1177 |
| XbaI | TCTAGA | 1 cut(s) | 74 |
| XmnI | GAANNNNTTC | 4 cut(s) | 122, 135, 256, 954 |
| XspI | CTAG | 4 cut(s) | 75, 458, 632, 714 |
| ZrmI | AGTACT | 1 cut(s) | 954 |