Pentatricopeptide repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_2 | PF13041 | 22 - 69 | 4.3e-07 | PPR repeat family |
| PPR_2 | PF13041 | 59 - 102 | 6.2e-09 | PPR repeat family |
| PPR_3 | PF13812 | 79 - 139 | 2.3e-08 | Pentatricopeptide repeat domain |
| PPR_1 | PF12854 | 87 - 118 | 1.4e-06 | PPR repeat |
| PPR_2 | PF13041 | 90 - 140 | 1.2e-12 | PPR repeat family |
| PPR_1 | PF12854 | 124 - 143 | 8.9e-08 | PPR repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 353 |
| AccII | CGCG | 1 cut(s) | 46 |
| AgsI | TTSAA | 5 cut(s) | 76, 133, 211, 253, 266 |
| AluBI | AGCT | 1 cut(s) | 228 |
| AluI | AGCT | 1 cut(s) | 228 |
| ApeKI | GCWGC | 1 cut(s) | 332 |
| AsuHPI | GGTGA | 1 cut(s) | 337 |
| AxyI | CCTNAGG | 1 cut(s) | 327 |
| BbsI | GAAGAC | 1 cut(s) | 254 |
| BbvI | GCAGC | 1 cut(s) | 319 |
| BccI | CCATC | 3 cut(s) | 36, 415, 438 |
| BceAI | ACGGC | 1 cut(s) | 316 |
| BfaI | CTAG | 1 cut(s) | 356 |
| BfuAI | ACCTGC | 1 cut(s) | 353 |
| BisI | GCNGC | 1 cut(s) | 333 |
| BlsI | GCNGC | 1 cut(s) | 334 |
| BmsI | GCATC | 1 cut(s) | 448 |
| BpiI | GAAGAC | 1 cut(s) | 254 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 30 |
| Bse21I | CCTNAGG | 1 cut(s) | 327 |
| BseGI | GGATG | 2 cut(s) | 15, 463 |
| BseMII | CTCAG | 1 cut(s) | 318 |
| BseXI | GCAGC | 1 cut(s) | 319 |
| BseYI | CCCAGC | 1 cut(s) | 377 |
| BsgI | GTGCAG | 1 cut(s) | 318 |
| Bsh1236I | CGCG | 1 cut(s) | 46 |
| BspCNI | CTCAG | 1 cut(s) | 319 |
| BspFNI | CGCG | 1 cut(s) | 46 |
| BspMI | ACCTGC | 1 cut(s) | 353 |
| Bst6I | CTCTTC | 1 cut(s) | 254 |
| BstC8I | GCNNGC | 1 cut(s) | 463 |
| BstDEI | CTNAG | 1 cut(s) | 327 |
| BstF5I | GGATG | 2 cut(s) | 15, 463 |
| BstFNI | CGCG | 1 cut(s) | 46 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 43, 52 |
| BstUI | CGCG | 1 cut(s) | 46 |
| BstV1I | GCAGC | 1 cut(s) | 319 |
| BstV2I | GAAGAC | 1 cut(s) | 254 |
| Bsu36I | CCTNAGG | 1 cut(s) | 327 |
| BtsCI | GGATG | 2 cut(s) | 15, 463 |
| BveI | ACCTGC | 1 cut(s) | 353 |
| Cac8I | GCNNGC | 1 cut(s) | 463 |
| CseI | GACGC | 2 cut(s) | 35, 140 |
| CviJI | RGCY | 6 cut(s) | 228, 303, 332, 376, 411, 465 |
| CviKI_1 | RGCY | 6 cut(s) | 228, 303, 332, 376, 411, 465 |
| DdeI | CTNAG | 1 cut(s) | 327 |
| Eam1104I | CTCTTC | 1 cut(s) | 254 |
| EarI | CTCTTC | 1 cut(s) | 254 |
| Eco81I | CCTNAGG | 1 cut(s) | 327 |
| FaiI | YATR | 2 cut(s) | 174, 472 |
| Fnu4HI | GCNGC | 1 cut(s) | 333 |
| FokI | GGATG | 2 cut(s) | 22, 470 |
| Fsp4HI | GCNGC | 1 cut(s) | 333 |
| FspBI | CTAG | 1 cut(s) | 356 |
| GluI | GCNGC | 1 cut(s) | 333 |
| GsaI | CCCAGC | 1 cut(s) | 381 |
| HgaI | GACGC | 2 cut(s) | 35, 140 |
| HincII | GTYRAC | 1 cut(s) | 87 |
| HindII | GTYRAC | 1 cut(s) | 87 |
| HinfI | GANTC | 2 cut(s) | 88, 211 |
| HphI | GGTGA | 1 cut(s) | 337 |
| Hpy166II | GTNNAC | 3 cut(s) | 87, 245, 387 |
| Hpy8I | GTNNAC | 3 cut(s) | 87, 245, 387 |
| Hpy99I | CGWCG | 1 cut(s) | 156 |
| HpyAV | CCTTC | 2 cut(s) | 66, 292 |
| HpyCH4V | TGCA | 2 cut(s) | 335, 417 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 43, 52 |
| HpyF3I | CTNAG | 1 cut(s) | 327 |
| LpnPI | CCDG | 3 cut(s) | 339, 348, 391 |
| Lsp1109I | GCAGC | 1 cut(s) | 319 |
| LweI | GCATC | 1 cut(s) | 448 |
| MaeI | CTAG | 1 cut(s) | 356 |
| MboII | GAAGA | 5 cut(s) | 51, 241, 254, 453, 460 |
| MfeI | CAATTG | 1 cut(s) | 193 |
| MluCI | AATT | 6 cut(s) | 156, 193, 254, 339, 402, 430 |
| MlyI | GAGTC | 1 cut(s) | 82 |
| MnlI | CCTC | 5 cut(s) | 24, 60, 322, 352, 448 |
| MseI | TTAA | 1 cut(s) | 405 |
| MslI | CAYNNNNRTG | 1 cut(s) | 350 |
| MunI | CAATTG | 1 cut(s) | 193 |
| MvnI | CGCG | 1 cut(s) | 46 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 43, 52 |
| PfeI | GAWTC | 1 cut(s) | 211 |
| PkrI | GCNGC | 1 cut(s) | 334 |
| PleI | GAGTC | 1 cut(s) | 82 |
| PpsI | GAGTC | 1 cut(s) | 82 |
| PspFI | CCCAGC | 1 cut(s) | 377 |
| RseI | CAYNNNNRTG | 1 cut(s) | 350 |
| SaqAI | TTAA | 1 cut(s) | 405 |
| SatI | GCNGC | 1 cut(s) | 333 |
| SchI | GAGTC | 1 cut(s) | 82 |
| SetI | ASST | 3 cut(s) | 230, 284, 367 |
| SfaNI | GCATC | 1 cut(s) | 448 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 350 |
| Sse9I | AATT | 6 cut(s) | 156, 193, 254, 339, 402, 430 |
| SspMI | CTAG | 1 cut(s) | 356 |
| TaqI | TCGA | 1 cut(s) | 154 |
| TasI | AATT | 6 cut(s) | 156, 193, 254, 339, 402, 430 |
| TfiI | GAWTC | 1 cut(s) | 211 |
| Tru1I | TTAA | 1 cut(s) | 405 |
| Tru9I | TTAA | 1 cut(s) | 405 |
| TseI | GCWGC | 1 cut(s) | 332 |
| XspI | CTAG | 1 cut(s) | 356 |