Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 390 |
| Acc16I | TGCGCA | 1 cut(s) | 8 |
| AciI | CCGC | 2 cut(s) | 15, 446 |
| AcsI | RAATTY | 1 cut(s) | 453 |
| AcyI | GRCGYC | 1 cut(s) | 387 |
| AgsI | TTSAA | 7 cut(s) | 136, 220, 247, 325, 367, 380, 507 |
| AluBI | AGCT | 1 cut(s) | 21 |
| AluI | AGCT | 1 cut(s) | 21 |
| ApeKI | GCWGC | 3 cut(s) | 9, 12, 18 |
| ApoI | RAATTY | 1 cut(s) | 453 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 140, 153, 274 |
| AspLEI | GCGC | 1 cut(s) | 9 |
| AsuHPI | GGTGA | 2 cut(s) | 385, 391 |
| AxyI | CCTNAGG | 1 cut(s) | 441 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 25, 57 |
| BbsI | GAAGAC | 1 cut(s) | 368 |
| BbvI | GCAGC | 3 cut(s) | 21, 24, 30 |
| BceAI | ACGGC | 3 cut(s) | 147, 218, 430 |
| BisI | GCNGC | 5 cut(s) | 10, 13, 16, 19, 447 |
| BlsI | GCNGC | 5 cut(s) | 11, 14, 17, 20, 448 |
| BmsI | GCATC | 2 cut(s) | 118, 246 |
| BpiI | GAAGAC | 1 cut(s) | 368 |
| BpmI | CTGGAG | 1 cut(s) | 491 |
| BsaHI | GRCGYC | 1 cut(s) | 387 |
| Bse21I | CCTNAGG | 1 cut(s) | 441 |
| BseGI | GGATG | 1 cut(s) | 133 |
| BseMII | CTCAG | 2 cut(s) | 206, 432 |
| BseRI | GAGGAG | 1 cut(s) | 137 |
| BseXI | GCAGC | 3 cut(s) | 21, 24, 30 |
| BspACI | CCGC | 2 cut(s) | 15, 446 |
| BspCNI | CTCAG | 2 cut(s) | 205, 433 |
| BssNI | GRCGYC | 1 cut(s) | 387 |
| BstACI | GRCGYC | 1 cut(s) | 387 |
| BstDEI | CTNAG | 2 cut(s) | 192, 441 |
| BstF5I | GGATG | 1 cut(s) | 133 |
| BstHHI | GCGC | 1 cut(s) | 9 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 15, 18 |
| BstV1I | GCAGC | 3 cut(s) | 21, 24, 30 |
| BstV2I | GAAGAC | 1 cut(s) | 368 |
| Bsu36I | CCTNAGG | 1 cut(s) | 441 |
| BtsCI | GGATG | 1 cut(s) | 133 |
| CfoI | GCGC | 1 cut(s) | 9 |
| CviAII | CATG | 1 cut(s) | 86 |
| CviJI | RGCY | 7 cut(s) | 21, 104, 112, 162, 342, 417, 489 |
| CviKI_1 | RGCY | 7 cut(s) | 21, 104, 112, 162, 342, 417, 489 |
| DdeI | CTNAG | 2 cut(s) | 192, 441 |
| Eco81I | CCTNAGG | 1 cut(s) | 441 |
| FaeI | CATG | 1 cut(s) | 89 |
| FaiI | YATR | 3 cut(s) | 35, 87, 288 |
| FatI | CATG | 1 cut(s) | 85 |
| Fnu4HI | GCNGC | 5 cut(s) | 10, 13, 16, 19, 447 |
| FokI | GGATG | 1 cut(s) | 140 |
| Fsp4HI | GCNGC | 5 cut(s) | 10, 13, 16, 19, 447 |
| FspI | TGCGCA | 1 cut(s) | 8 |
| GlaI | GCGC | 1 cut(s) | 8 |
| GluI | GCNGC | 5 cut(s) | 10, 13, 16, 19, 447 |
| GsuI | CTGGAG | 1 cut(s) | 491 |
| HhaI | GCGC | 1 cut(s) | 9 |
| Hin1I | GRCGYC | 1 cut(s) | 387 |
| Hin1II | CATG | 1 cut(s) | 89 |
| Hin6I | GCGC | 1 cut(s) | 7 |
| HinP1I | GCGC | 1 cut(s) | 7 |
| HincII | GTYRAC | 2 cut(s) | 55, 206 |
| HindII | GTYRAC | 2 cut(s) | 55, 206 |
| HinfI | GANTC | 2 cut(s) | 270, 325 |
| HphI | GGTGA | 2 cut(s) | 385, 391 |
| Hpy166II | GTNNAC | 2 cut(s) | 55, 206 |
| Hpy188I | TCNGA | 1 cut(s) | 280 |
| Hpy188III | TCNNGA | 1 cut(s) | 267 |
| Hpy8I | GTNNAC | 2 cut(s) | 55, 206 |
| Hpy99I | CGWCG | 1 cut(s) | 392 |
| HpyAV | CCTTC | 1 cut(s) | 406 |
| HpyCH4IV | ACGT | 2 cut(s) | 387, 502 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 15, 18 |
| HpyF3I | CTNAG | 2 cut(s) | 192, 441 |
| HpySE526I | ACGT | 2 cut(s) | 387, 502 |
| Hsp92I | GRCGYC | 1 cut(s) | 387 |
| Hsp92II | CATG | 1 cut(s) | 89 |
| HspAI | GCGC | 1 cut(s) | 7 |
| LpnPI | CCDG | 5 cut(s) | 114, 252, 396, 453, 455 |
| Lsp1109I | GCAGC | 3 cut(s) | 21, 24, 30 |
| LweI | GCATC | 2 cut(s) | 118, 246 |
| MaeII | ACGT | 2 cut(s) | 387, 502 |
| MaeIII | GTNAC | 2 cut(s) | 391, 498 |
| MboII | GAAGA | 3 cut(s) | 33, 355, 368 |
| MluCI | AATT | 3 cut(s) | 215, 368, 453 |
| MnlI | CCTC | 8 cut(s) | 23, 69, 115, 115, 118, 177, 436, 466 |
| MroXI | GAANNNNTTC | 3 cut(s) | 140, 153, 274 |
| MseI | TTAA | 1 cut(s) | 306 |
| MspA1I | CMGCKG | 1 cut(s) | 15 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 15, 18 |
| NlaIII | CATG | 1 cut(s) | 89 |
| NmuCI | GTSAC | 1 cut(s) | 391 |
| NsbI | TGCGCA | 1 cut(s) | 8 |
| PdmI | GAANNNNTTC | 3 cut(s) | 140, 153, 274 |
| PfeI | GAWTC | 2 cut(s) | 270, 325 |
| PflFI | GACNNNGTC | 1 cut(s) | 389 |
| PkrI | GCNGC | 5 cut(s) | 11, 14, 17, 20, 448 |
| PsyI | GACNNNGTC | 1 cut(s) | 389 |
| SaqAI | TTAA | 1 cut(s) | 306 |
| SatI | GCNGC | 5 cut(s) | 10, 13, 16, 19, 447 |
| SetI | ASST | 5 cut(s) | 23, 34, 390, 398, 505 |
| SfaNI | GCATC | 2 cut(s) | 118, 246 |
| Sse9I | AATT | 3 cut(s) | 215, 368, 453 |
| SsiI | CCGC | 2 cut(s) | 15, 446 |
| TaiI | ACGT | 2 cut(s) | 390, 505 |
| TaqI | TCGA | 1 cut(s) | 74 |
| TasI | AATT | 3 cut(s) | 215, 368, 453 |
| TauI | GCSGC | 2 cut(s) | 18, 449 |
| TfiI | GAWTC | 2 cut(s) | 270, 325 |
| Tru1I | TTAA | 1 cut(s) | 306 |
| Tru9I | TTAA | 1 cut(s) | 306 |
| TseFI | GTSAC | 1 cut(s) | 391 |
| TseI | GCWGC | 3 cut(s) | 9, 12, 18 |
| Tsp45I | GTSAC | 1 cut(s) | 391 |
| TspDTI | ATGAA | 1 cut(s) | 59 |
| TspGWI | ACGGA | 2 cut(s) | 40, 134 |
| Tth111I | GACNNNGTC | 1 cut(s) | 389 |
| XapI | RAATTY | 1 cut(s) | 453 |
| XmnI | GAANNNNTTC | 3 cut(s) | 140, 153, 274 |
| ZraI | GACGTC | 1 cut(s) | 388 |