endonuclease activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_3 | PF13812 | 2 - 54 | 3.5e-08 | Pentatricopeptide repeat domain |
| PPR_long | PF17177 | 3 - 95 | 7.3e-06 | Pentacotripeptide-repeat region of PRORP |
| PPR_1 | PF12854 | 4 - 36 | 2.8e-06 | PPR repeat |
| PPR_2 | PF13041 | 7 - 56 | 2e-13 | PPR repeat family |
| PPR_1 | PF12854 | 38 - 71 | 2.2e-12 | PPR repeat |
| PPR_2 | PF13041 | 42 - 91 | 1.4e-17 | PPR repeat family |
| PPR | PF01535 | 45 - 75 | 2.2e-06 | PPR repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcyI | GRCGYC | 1 cut(s) | 81 |
| AfaI | GTAC | 1 cut(s) | 15 |
| AgsI | TTSAA | 1 cut(s) | 320 |
| AspS9I | GGNCC | 1 cut(s) | 72 |
| AsuHPI | GGTGA | 2 cut(s) | 194, 219 |
| AvaII | GGWCC | 1 cut(s) | 72 |
| Bme18I | GGWCC | 1 cut(s) | 72 |
| BmgT120I | GGNCC | 1 cut(s) | 72 |
| BmsI | GCATC | 2 cut(s) | 40, 250 |
| BsaHI | GRCGYC | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 1 cut(s) | 75 |
| BseDI | CCNNGG | 1 cut(s) | 75 |
| BseGI | GGATG | 2 cut(s) | 10, 285 |
| BssECI | CCNNGG | 1 cut(s) | 75 |
| BssNI | GRCGYC | 1 cut(s) | 81 |
| BssT1I | CCWWGG | 1 cut(s) | 75 |
| Bst4CI | ACNGT | 2 cut(s) | 91, 146 |
| BstACI | GRCGYC | 1 cut(s) | 81 |
| BstC8I | GCNNGC | 1 cut(s) | 295 |
| BstDEI | CTNAG | 1 cut(s) | 119 |
| BstF5I | GGATG | 2 cut(s) | 10, 285 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 299, 308 |
| BtsCI | GGATG | 2 cut(s) | 10, 285 |
| BtsIMutI | CAGTG | 1 cut(s) | 87 |
| Cac8I | GCNNGC | 1 cut(s) | 295 |
| Cfr13I | GGNCC | 1 cut(s) | 72 |
| CseI | GACGC | 1 cut(s) | 89 |
| Csp6I | GTAC | 1 cut(s) | 14 |
| CviAII | CATG | 1 cut(s) | 155 |
| CviJI | RGCY | 1 cut(s) | 293 |
| CviKI_1 | RGCY | 1 cut(s) | 293 |
| CviQI | GTAC | 1 cut(s) | 14 |
| DdeI | CTNAG | 1 cut(s) | 119 |
| Eco130I | CCWWGG | 1 cut(s) | 75 |
| Eco47I | GGWCC | 1 cut(s) | 72 |
| EcoT14I | CCWWGG | 1 cut(s) | 75 |
| ErhI | CCWWGG | 1 cut(s) | 75 |
| FaeI | CATG | 1 cut(s) | 158 |
| FaiI | YATR | 7 cut(s) | 156, 161, 163, 236, 324, 329, 336 |
| FatI | CATG | 1 cut(s) | 154 |
| FauNDI | CATATG | 1 cut(s) | 161 |
| FokI | GGATG | 2 cut(s) | 17, 292 |
| HgaI | GACGC | 1 cut(s) | 89 |
| Hin1I | GRCGYC | 1 cut(s) | 81 |
| Hin1II | CATG | 1 cut(s) | 158 |
| HinfI | GANTC | 1 cut(s) | 106 |
| HphI | GGTGA | 2 cut(s) | 194, 219 |
| Hpy188III | TCNNGA | 1 cut(s) | 125 |
| HpyAV | CCTTC | 2 cut(s) | 63, 269 |
| HpyCH4III | ACNGT | 2 cut(s) | 91, 146 |
| HpyCH4IV | ACGT | 1 cut(s) | 129 |
| HpyCH4V | TGCA | 3 cut(s) | 60, 165, 270 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 299, 308 |
| HpyF3I | CTNAG | 1 cut(s) | 119 |
| HpySE526I | ACGT | 1 cut(s) | 129 |
| Hsp92I | GRCGYC | 1 cut(s) | 81 |
| Hsp92II | CATG | 1 cut(s) | 158 |
| LpnPI | CCDG | 2 cut(s) | 138, 203 |
| LweI | GCATC | 2 cut(s) | 40, 250 |
| MaeII | ACGT | 1 cut(s) | 129 |
| MaeIII | GTNAC | 1 cut(s) | 28 |
| MfeI | CAATTG | 1 cut(s) | 176 |
| MluCI | AATT | 3 cut(s) | 150, 176, 237 |
| MlyI | GAGTC | 1 cut(s) | 100 |
| MnlI | CCTC | 5 cut(s) | 49, 95, 107, 301, 332 |
| MseI | TTAA | 2 cut(s) | 35, 149 |
| MunI | CAATTG | 1 cut(s) | 176 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 299, 308 |
| NdeI | CATATG | 1 cut(s) | 161 |
| NlaIII | CATG | 1 cut(s) | 158 |
| PleI | GAGTC | 1 cut(s) | 100 |
| PpsI | GAGTC | 1 cut(s) | 100 |
| PspPI | GGNCC | 1 cut(s) | 72 |
| RsaI | GTAC | 1 cut(s) | 15 |
| RsaNI | GTAC | 1 cut(s) | 14 |
| SaqAI | TTAA | 2 cut(s) | 35, 149 |
| Sau96I | GGNCC | 1 cut(s) | 72 |
| SchI | GAGTC | 1 cut(s) | 100 |
| SetI | ASST | 7 cut(s) | 35, 41, 118, 132, 197, 217, 343 |
| SfaNI | GCATC | 2 cut(s) | 40, 250 |
| SgeI | CNNG | 8 cut(s) | 73, 88, 110, 137, 167, 204, 230, 306 |
| SinI | GGWCC | 1 cut(s) | 72 |
| Sse9I | AATT | 3 cut(s) | 150, 176, 237 |
| StyI | CCWWGG | 1 cut(s) | 75 |
| TaaI | ACNGT | 2 cut(s) | 91, 146 |
| TaiI | ACGT | 1 cut(s) | 132 |
| TasI | AATT | 3 cut(s) | 150, 176, 237 |
| Tru1I | TTAA | 2 cut(s) | 35, 149 |
| Tru9I | TTAA | 2 cut(s) | 35, 149 |
| TscAI | CASTG | 1 cut(s) | 94 |
| TspDTI | ATGAA | 3 cut(s) | 21, 143, 219 |
| TspRI | CASTG | 1 cut(s) | 94 |
| VpaK11BI | GGWCC | 1 cut(s) | 72 |