Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 882 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 228 |
| AatII | GACGTC | 1 cut(s) | 226 |
| AclI | AACGTT | 1 cut(s) | 955 |
| AclWI | GGATC | 1 cut(s) | 608 |
| AcoI | YGGCCR | 1 cut(s) | 961 |
| AcyI | GRCGYC | 3 cut(s) | 223, 612, 1002 |
| AfeI | AGCGCT | 1 cut(s) | 295 |
| AgsI | TTSAA | 8 cut(s) | 70, 125, 409, 523, 568, 629, 641, 980 |
| AhlI | ACTAGT | 1 cut(s) | 391 |
| AluBI | AGCT | 4 cut(s) | 340, 509, 937, 1014 |
| AluI | AGCT | 4 cut(s) | 340, 509, 937, 1014 |
| Alw26I | GTCTC | 2 cut(s) | 11, 910 |
| AlwI | GGATC | 1 cut(s) | 608 |
| Aor51HI | AGCGCT | 1 cut(s) | 295 |
| AoxI | GGCC | 2 cut(s) | 100, 961 |
| ApeKI | GCWGC | 3 cut(s) | 191, 214, 296 |
| AseI | ATTAAT | 3 cut(s) | 51, 260, 816 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 413 |
| AspLEI | GCGC | 1 cut(s) | 296 |
| AspS9I | GGNCC | 1 cut(s) | 100 |
| AsuC2I | CCSGG | 1 cut(s) | 913 |
| AsuHPI | GGTGA | 4 cut(s) | 127, 136, 544, 553 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 378, 411 |
| BalI | TGGCCA | 1 cut(s) | 963 |
| BanII | GRGCYC | 1 cut(s) | 755 |
| BauI | CACGAG | 1 cut(s) | 21 |
| BbsI | GAAGAC | 2 cut(s) | 113, 550 |
| BbvCI | CCTCAGC | 1 cut(s) | 186 |
| BbvI | GCAGC | 3 cut(s) | 201, 203, 283 |
| BccI | CCATC | 5 cut(s) | 313, 327, 371, 680, 890 |
| BceAI | ACGGC | 1 cut(s) | 175 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 349, 383 |
| BciVI | GTATCC | 1 cut(s) | 379 |
| BclI | TGATCA | 1 cut(s) | 397 |
| BcnI | CCSGG | 1 cut(s) | 913 |
| BcoDI | GTCTC | 2 cut(s) | 11, 910 |
| BcuI | ACTAGT | 1 cut(s) | 391 |
| BfaI | CTAG | 3 cut(s) | 392, 446, 491 |
| BfmI | CTRYAG | 3 cut(s) | 215, 355, 920 |
| BfoI | RGCGCY | 1 cut(s) | 297 |
| BfuI | GTATCC | 1 cut(s) | 379 |
| BisI | GCNGC | 3 cut(s) | 192, 215, 297 |
| BlsI | GCNGC | 3 cut(s) | 193, 216, 298 |
| Bme1390I | CCNGG | 1 cut(s) | 913 |
| BmgT120I | GGNCC | 1 cut(s) | 100 |
| BmrFI | CCNGG | 1 cut(s) | 913 |
| BpiI | GAAGAC | 2 cut(s) | 113, 550 |
| Bpu10I | CCTNAGC | 1 cut(s) | 186 |
| BpuMI | CCSGG | 1 cut(s) | 913 |
| BsaHI | GRCGYC | 3 cut(s) | 223, 612, 1002 |
| BsaI | GGTCTC | 1 cut(s) | 11 |
| BsaJI | CCNNGG | 1 cut(s) | 157 |
| BseDI | CCNNGG | 1 cut(s) | 157 |
| BseGI | GGATG | 2 cut(s) | 338, 691 |
| BseMII | CTCAG | 1 cut(s) | 177 |
| BseXI | GCAGC | 3 cut(s) | 201, 203, 283 |
| BshFI | GGCC | 2 cut(s) | 102, 963 |
| BsiSI | CCGG | 1 cut(s) | 912 |
| BslFI | GGGAC | 1 cut(s) | 234 |
| BsmAI | GTCTC | 2 cut(s) | 11, 910 |
| BsmFI | GGGAC | 1 cut(s) | 234 |
| BsnI | GGCC | 2 cut(s) | 102, 963 |
| Bso31I | GGTCTC | 1 cut(s) | 11 |
| Bsp1286I | GDGCHC | 1 cut(s) | 755 |
| Bsp143I | GATC | 2 cut(s) | 397, 600 |
| BspANI | GGCC | 2 cut(s) | 102, 963 |
| BspCNI | CTCAG | 1 cut(s) | 178 |
| BspMAI | CTGCAG | 1 cut(s) | 219 |
| BspPI | GGATC | 1 cut(s) | 608 |
| BspTNI | GGTCTC | 1 cut(s) | 11 |
| BssECI | CCNNGG | 1 cut(s) | 157 |
| BssMI | GATC | 2 cut(s) | 397, 600 |
| BssNI | GRCGYC | 3 cut(s) | 223, 612, 1002 |
| BssSI | CACGAG | 1 cut(s) | 21 |
| Bst2BI | CACGAG | 1 cut(s) | 21 |
| Bst4CI | ACNGT | 3 cut(s) | 374, 674, 874 |
| Bst6I | CTCTTC | 1 cut(s) | 419 |
| BstACI | GRCGYC | 3 cut(s) | 223, 612, 1002 |
| BstC8I | GCNNGC | 2 cut(s) | 278, 698 |
| BstDEI | CTNAG | 2 cut(s) | 186, 574 |
| BstDSI | CCRYGG | 1 cut(s) | 157 |
| BstF5I | GGATG | 2 cut(s) | 338, 691 |
| BstH2I | RGCGCY | 1 cut(s) | 297 |
| BstHHI | GCGC | 1 cut(s) | 296 |
| BstKTI | GATC | 2 cut(s) | 400, 603 |
| BstMAI | GTCTC | 2 cut(s) | 11, 910 |
| BstMBI | GATC | 2 cut(s) | 397, 600 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 191, 492 |
| BstNSI | RCATGY | 1 cut(s) | 280 |
| BstSCI | CCNGG | 1 cut(s) | 911 |
| BstSFI | CTRYAG | 3 cut(s) | 215, 355, 920 |
| BstV1I | GCAGC | 3 cut(s) | 201, 203, 283 |
| BstV2I | GAAGAC | 2 cut(s) | 113, 550 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 622 |
| BsuI | GTATCC | 1 cut(s) | 379 |
| BsuRI | GGCC | 2 cut(s) | 102, 963 |
| BtgI | CCRYGG | 1 cut(s) | 157 |
| BtsCI | GGATG | 2 cut(s) | 338, 691 |
| Cac8I | GCNNGC | 2 cut(s) | 278, 698 |
| CfoI | GCGC | 1 cut(s) | 296 |
| Cfr13I | GGNCC | 1 cut(s) | 100 |
| CseI | GACGC | 2 cut(s) | 620, 1010 |
| CviAII | CATG | 1 cut(s) | 277 |
| DdeI | CTNAG | 2 cut(s) | 186, 574 |
| DpnI | GATC | 2 cut(s) | 399, 602 |
| DpnII | GATC | 2 cut(s) | 397, 600 |
| DraI | TTTAAA | 1 cut(s) | 39 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 228 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 228 |
| EaeI | YGGCCR | 1 cut(s) | 961 |
| Eam1104I | CTCTTC | 1 cut(s) | 419 |
| EarI | CTCTTC | 1 cut(s) | 419 |
| Eco24I | GRGCYC | 1 cut(s) | 755 |
| Eco31I | GGTCTC | 1 cut(s) | 11 |
| Eco47III | AGCGCT | 1 cut(s) | 295 |
| EcoT22I | ATGCAT | 1 cut(s) | 849 |
| EcoT38I | GRGCYC | 1 cut(s) | 755 |
| FaeI | CATG | 1 cut(s) | 280 |
| FaqI | GGGAC | 1 cut(s) | 234 |
| FatI | CATG | 1 cut(s) | 276 |
| FauNDI | CATATG | 1 cut(s) | 948 |
| FbaI | TGATCA | 1 cut(s) | 397 |
| Fnu4HI | GCNGC | 3 cut(s) | 192, 215, 297 |
| FokI | GGATG | 2 cut(s) | 345, 698 |
| FriOI | GRGCYC | 1 cut(s) | 755 |
| Fsp4HI | GCNGC | 3 cut(s) | 192, 215, 297 |
| FspBI | CTAG | 3 cut(s) | 392, 446, 491 |
| GlaI | GCGC | 1 cut(s) | 295 |
| GluI | GCNGC | 3 cut(s) | 192, 215, 297 |
| HaeII | RGCGCY | 1 cut(s) | 297 |
| HaeIII | GGCC | 2 cut(s) | 102, 963 |
| HapII | CCGG | 1 cut(s) | 912 |
| HgaI | GACGC | 2 cut(s) | 620, 1010 |
| HhaI | GCGC | 1 cut(s) | 296 |
| Hin1I | GRCGYC | 3 cut(s) | 223, 612, 1002 |
| Hin1II | CATG | 1 cut(s) | 280 |
| Hin6I | GCGC | 1 cut(s) | 294 |
| HinP1I | GCGC | 1 cut(s) | 294 |
| HindIII | AAGCTT | 1 cut(s) | 338 |
| HinfI | GANTC | 4 cut(s) | 15, 70, 480, 637 |
| HpaII | CCGG | 1 cut(s) | 912 |
| HphI | GGTGA | 4 cut(s) | 127, 136, 544, 553 |
| Hpy166II | GTNNAC | 2 cut(s) | 246, 610 |
| Hpy188I | TCNGA | 2 cut(s) | 173, 857 |
| Hpy188III | TCNNGA | 4 cut(s) | 23, 205, 446, 551 |
| Hpy8I | GTNNAC | 2 cut(s) | 246, 610 |
| Hpy99I | CGWCG | 1 cut(s) | 842 |
| HpyAV | CCTTC | 3 cut(s) | 151, 574, 590 |
| HpyCH4III | ACNGT | 3 cut(s) | 374, 674, 874 |
| HpyCH4IV | ACGT | 3 cut(s) | 223, 450, 955 |
| HpyCH4V | TGCA | 8 cut(s) | 217, 276, 304, 486, 700, 801, 847, 952 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 191, 492 |
| HpyF3I | CTNAG | 2 cut(s) | 186, 574 |
| HpySE526I | ACGT | 3 cut(s) | 223, 450, 955 |
| Hsp92I | GRCGYC | 3 cut(s) | 223, 612, 1002 |
| Hsp92II | CATG | 1 cut(s) | 280 |
| HspAI | GCGC | 1 cut(s) | 294 |
| Ksp22I | TGATCA | 1 cut(s) | 397 |
| Kzo9I | GATC | 2 cut(s) | 397, 600 |
| LpnPI | CCDG | 9 cut(s) | 141, 190, 203, 315, 564, 669, 908, 925, 984 |
| Lsp1109I | GCAGC | 3 cut(s) | 201, 203, 283 |
| MaeI | CTAG | 3 cut(s) | 392, 446, 491 |
| MaeII | ACGT | 3 cut(s) | 223, 450, 955 |
| MaeIII | GTNAC | 5 cut(s) | 133, 454, 689, 776, 874 |
| MalI | GATC | 2 cut(s) | 399, 602 |
| MboI | GATC | 2 cut(s) | 397, 600 |
| MboII | GAAGA | 6 cut(s) | 100, 113, 328, 335, 406, 550 |
| MhlI | GDGCHC | 1 cut(s) | 755 |
| MlsI | TGGCCA | 1 cut(s) | 963 |
| MluCI | AATT | 4 cut(s) | 52, 104, 305, 568 |
| MluNI | TGGCCA | 1 cut(s) | 963 |
| MlyI | GAGTC | 1 cut(s) | 474 |
| MnlI | CCTC | 4 cut(s) | 181, 422, 428, 814 |
| Mox20I | TGGCCA | 1 cut(s) | 963 |
| Mph1103I | ATGCAT | 1 cut(s) | 849 |
| MroXI | GAANNNNTTC | 1 cut(s) | 413 |
| MscI | TGGCCA | 1 cut(s) | 963 |
| MseI | TTAA | 4 cut(s) | 38, 51, 260, 816 |
| MslI | CAYNNNNRTG | 2 cut(s) | 422, 785 |
| Msp20I | TGGCCA | 1 cut(s) | 963 |
| MspI | CCGG | 1 cut(s) | 912 |
| MspR9I | CCNGG | 1 cut(s) | 913 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 191, 492 |
| NciI | CCSGG | 1 cut(s) | 913 |
| NdeI | CATATG | 1 cut(s) | 948 |
| NdeII | GATC | 2 cut(s) | 397, 600 |
| NlaIII | CATG | 1 cut(s) | 280 |
| NmuCI | GTSAC | 1 cut(s) | 133 |
| NsiI | ATGCAT | 1 cut(s) | 849 |
| NspI | RCATGY | 1 cut(s) | 280 |
| PaeI | GCATGC | 1 cut(s) | 280 |
| PdmI | GAANNNNTTC | 1 cut(s) | 413 |
| PfeI | GAWTC | 3 cut(s) | 15, 70, 637 |
| PkrI | GCNGC | 3 cut(s) | 193, 216, 298 |
| PleI | GAGTC | 1 cut(s) | 474 |
| PpsI | GAGTC | 1 cut(s) | 474 |
| PshBI | ATTAAT | 3 cut(s) | 51, 260, 816 |
| PsiI | TTATAA | 1 cut(s) | 882 |
| Psp1406I | AACGTT | 1 cut(s) | 955 |
| PspPI | GGNCC | 1 cut(s) | 100 |
| PstI | CTGCAG | 1 cut(s) | 219 |
| RseI | CAYNNNNRTG | 2 cut(s) | 422, 785 |
| SaqAI | TTAA | 4 cut(s) | 38, 51, 260, 816 |
| SatI | GCNGC | 3 cut(s) | 192, 215, 297 |
| Sau3AI | GATC | 2 cut(s) | 397, 600 |
| Sau96I | GGNCC | 1 cut(s) | 100 |
| SchI | GAGTC | 1 cut(s) | 474 |
| ScrFI | CCNGG | 1 cut(s) | 913 |
| SduI | GDGCHC | 1 cut(s) | 755 |
| SfcI | CTRYAG | 3 cut(s) | 215, 355, 920 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 422, 785 |
| SpeI | ACTAGT | 1 cut(s) | 391 |
| SphI | GCATGC | 1 cut(s) | 280 |
| Sse9I | AATT | 4 cut(s) | 52, 104, 305, 568 |
| SspI | AATATT | 1 cut(s) | 43 |
| SspMI | CTAG | 3 cut(s) | 392, 446, 491 |
| StyD4I | CCNGG | 1 cut(s) | 911 |
| TaaI | ACNGT | 3 cut(s) | 374, 674, 874 |
| TaiI | ACGT | 3 cut(s) | 226, 453, 958 |
| TaqI | TCGA | 2 cut(s) | 369, 837 |
| TasI | AATT | 4 cut(s) | 52, 104, 305, 568 |
| TfiI | GAWTC | 3 cut(s) | 15, 70, 637 |
| Tru1I | TTAA | 4 cut(s) | 38, 51, 260, 816 |
| Tru9I | TTAA | 4 cut(s) | 38, 51, 260, 816 |
| TseFI | GTSAC | 1 cut(s) | 133 |
| TseI | GCWGC | 3 cut(s) | 191, 214, 296 |
| Tsp45I | GTSAC | 1 cut(s) | 133 |
| TspDTI | ATGAA | 4 cut(s) | 100, 540, 758, 803 |
| TspGWI | ACGGA | 3 cut(s) | 492, 725, 807 |
| VspI | ATTAAT | 3 cut(s) | 51, 260, 816 |
| XbaI | TCTAGA | 1 cut(s) | 445 |
| XceI | RCATGY | 1 cut(s) | 280 |
| XmnI | GAANNNNTTC | 1 cut(s) | 413 |
| XspI | CTAG | 3 cut(s) | 392, 446, 491 |
| ZraI | GACGTC | 1 cut(s) | 224 |
| Zsp2I | ATGCAT | 1 cut(s) | 849 |