Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1134 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 255 |
| AatII | GACGTC | 1 cut(s) | 387 |
| AccIII | TCCGGA | 1 cut(s) | 802 |
| AciI | CCGC | 5 cut(s) | 16, 860, 1163, 1212, 1389 |
| AclWI | GGATC | 3 cut(s) | 400, 813, 1691 |
| AcoI | YGGCCR | 1 cut(s) | 1213 |
| AcsI | RAATTY | 1 cut(s) | 450 |
| AcyI | GRCGYC | 1 cut(s) | 384 |
| AfaI | GTAC | 1 cut(s) | 923 |
| AhlI | ACTAGT | 1 cut(s) | 976 |
| AjnI | CCWGG | 1 cut(s) | 1595 |
| AluBI | AGCT | 8 cut(s) | 21, 339, 761, 1066, 1219, 1373, 1504, 1714 |
| AluI | AGCT | 8 cut(s) | 21, 339, 761, 1066, 1219, 1373, 1504, 1714 |
| Alw26I | GTCTC | 5 cut(s) | 82, 241, 263, 1162, 1583 |
| AlwI | GGATC | 3 cut(s) | 400, 813, 1691 |
| Ama87I | CYCGRG | 1 cut(s) | 22 |
| Aor13HI | TCCGGA | 1 cut(s) | 802 |
| AoxI | GGCC | 4 cut(s) | 351, 745, 1213, 1465 |
| ApeKI | GCWGC | 6 cut(s) | 18, 443, 548, 1504, 1708, 1711 |
| ApoI | RAATTY | 1 cut(s) | 450 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 137, 150, 1113 |
| AspS9I | GGNCC | 3 cut(s) | 352, 1465, 1548 |
| AsuHPI | GGTGA | 3 cut(s) | 382, 448, 548 |
| AvaI | CYCGRG | 1 cut(s) | 22 |
| AvaII | GGWCC | 1 cut(s) | 1548 |
| AxyI | CCTNAGG | 1 cut(s) | 438 |
| BanII | GRGCYC | 1 cut(s) | 1007 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 22, 54 |
| BauI | CACGAG | 1 cut(s) | 965 |
| BbsI | GAAGAC | 2 cut(s) | 365, 379 |
| BbvI | GCAGC | 6 cut(s) | 30, 430, 535, 1491, 1695, 1723 |
| BccI | CCATC | 8 cut(s) | 105, 247, 565, 623, 1142, 1247, 1300, 1535 |
| BceAI | ACGGC | 2 cut(s) | 427, 1299 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 13, 47 |
| BciT130I | CCWGG | 1 cut(s) | 1597 |
| BciVI | GTATCC | 1 cut(s) | 631 |
| BcoDI | GTCTC | 5 cut(s) | 82, 241, 263, 1162, 1583 |
| BcuI | ACTAGT | 1 cut(s) | 976 |
| BfaI | CTAG | 5 cut(s) | 101, 743, 977, 996, 1205 |
| BfmI | CTRYAG | 3 cut(s) | 228, 1641, 1709 |
| BfuI | GTATCC | 1 cut(s) | 631 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 134 |
| BglII | AGATCT | 1 cut(s) | 1396 |
| BisI | GCNGC | 8 cut(s) | 16, 19, 444, 549, 1213, 1505, 1709, 1712 |
| BlpI | GCTNAGC | 1 cut(s) | 11 |
| BlsI | GCNGC | 8 cut(s) | 17, 20, 445, 550, 1214, 1506, 1710, 1713 |
| Bme1390I | CCNGG | 1 cut(s) | 1597 |
| Bme18I | GGWCC | 1 cut(s) | 1548 |
| BmeT110I | CYCGRG | 1 cut(s) | 22 |
| BmgT120I | GGNCC | 3 cut(s) | 352, 1465, 1548 |
| BmiI | GGNNCC | 1 cut(s) | 1006 |
| BmrFI | CCNGG | 1 cut(s) | 1597 |
| BmsI | GCATC | 6 cut(s) | 115, 575, 823, 1191, 1636, 1658 |
| BpiI | GAAGAC | 2 cut(s) | 365, 379 |
| BpmI | CTGGAG | 1 cut(s) | 1521 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 11 |
| BpuEI | CTTGAG | 1 cut(s) | 1646 |
| Bsa29I | ATCGAT | 1 cut(s) | 648 |
| BsaAI | YACGTR | 1 cut(s) | 921 |
| BsaHI | GRCGYC | 1 cut(s) | 384 |
| BsaI | GGTCTC | 1 cut(s) | 263 |
| BsaJI | CCNNGG | 4 cut(s) | 409, 1008, 1567, 1596 |
| BsaWI | WCCGGW | 1 cut(s) | 802 |
| Bse1I | ACTGG | 1 cut(s) | 748 |
| Bse21I | CCTNAGG | 1 cut(s) | 438 |
| Bse3DI | GCAATG | 1 cut(s) | 663 |
| BseAI | TCCGGA | 1 cut(s) | 802 |
| BseBI | CCWGG | 1 cut(s) | 1597 |
| BseCI | ATCGAT | 1 cut(s) | 648 |
| BseDI | CCNNGG | 4 cut(s) | 409, 1008, 1567, 1596 |
| BseGI | GGATG | 5 cut(s) | 130, 590, 781, 1535, 1592 |
| BseMI | GCAATG | 1 cut(s) | 663 |
| BseMII | CTCAG | 6 cut(s) | 25, 203, 429, 776, 1188, 1499 |
| BseNI | ACTGG | 1 cut(s) | 748 |
| BseRI | GAGGAG | 2 cut(s) | 800, 969 |
| BseXI | GCAGC | 6 cut(s) | 30, 430, 535, 1491, 1695, 1723 |
| BsgI | GTGCAG | 1 cut(s) | 429 |
| BshFI | GGCC | 4 cut(s) | 353, 747, 1215, 1467 |
| BshVI | ATCGAT | 1 cut(s) | 648 |
| BsiHKCI | CYCGRG | 1 cut(s) | 22 |
| BsiSI | CCGG | 1 cut(s) | 803 |
| BslFI | GGGAC | 1 cut(s) | 534 |
| BsmAI | GTCTC | 5 cut(s) | 82, 241, 263, 1162, 1583 |
| BsmFI | GGGAC | 1 cut(s) | 534 |
| BsnI | GGCC | 4 cut(s) | 353, 747, 1215, 1467 |
| Bso31I | GGTCTC | 1 cut(s) | 263 |
| BsoBI | CYCGRG | 1 cut(s) | 22 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1007 |
| Bsp13I | TCCGGA | 1 cut(s) | 802 |
| Bsp143I | GATC | 5 cut(s) | 405, 649, 805, 1396, 1696 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 11 |
| Bsp19I | CCATGG | 1 cut(s) | 1008 |
| BspACI | CCGC | 5 cut(s) | 16, 860, 1163, 1212, 1389 |
| BspANI | GGCC | 4 cut(s) | 353, 747, 1215, 1467 |
| BspCNI | CTCAG | 6 cut(s) | 24, 202, 430, 777, 1189, 1500 |
| BspDI | ATCGAT | 1 cut(s) | 648 |
| BspEI | TCCGGA | 1 cut(s) | 802 |
| BspLI | GGNNCC | 1 cut(s) | 1006 |
| BspMAI | CTGCAG | 3 cut(s) | 232, 1645, 1713 |
| BspPI | GGATC | 3 cut(s) | 400, 813, 1691 |
| BspTNI | GGTCTC | 1 cut(s) | 263 |
| BsrDI | GCAATG | 1 cut(s) | 663 |
| BsrI | ACTGG | 1 cut(s) | 748 |
| BssECI | CCNNGG | 4 cut(s) | 409, 1008, 1567, 1596 |
| BssMI | GATC | 5 cut(s) | 405, 649, 805, 1396, 1696 |
| BssNI | GRCGYC | 1 cut(s) | 384 |
| BssSI | CACGAG | 1 cut(s) | 965 |
| BssT1I | CCWWGG | 1 cut(s) | 1008 |
| Bst2BI | CACGAG | 1 cut(s) | 965 |
| Bst2UI | CCWGG | 1 cut(s) | 1597 |
| Bst4CI | ACNGT | 6 cut(s) | 545, 626, 941, 947, 1126, 1586 |
| BstACI | GRCGYC | 1 cut(s) | 384 |
| BstBAI | YACGTR | 1 cut(s) | 921 |
| BstC8I | GCNNGC | 2 cut(s) | 590, 1217 |
| BstDEI | CTNAG | 6 cut(s) | 11, 189, 438, 785, 1197, 1508 |
| BstDSI | CCRYGG | 2 cut(s) | 409, 1008 |
| BstF5I | GGATG | 5 cut(s) | 130, 590, 781, 1535, 1592 |
| BstKTI | GATC | 5 cut(s) | 408, 652, 808, 1399, 1699 |
| BstMAI | GTCTC | 5 cut(s) | 82, 241, 263, 1162, 1583 |
| BstMBI | GATC | 5 cut(s) | 405, 649, 805, 1396, 1696 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 134, 744 |
| BstNI | CCWGG | 1 cut(s) | 1597 |
| BstSCI | CCNGG | 1 cut(s) | 1595 |
| BstSFI | CTRYAG | 3 cut(s) | 228, 1641, 1709 |
| BstSNI | TACGTA | 1 cut(s) | 921 |
| BstV1I | GCAGC | 6 cut(s) | 30, 430, 535, 1491, 1695, 1723 |
| BstV2I | GAAGAC | 2 cut(s) | 365, 379 |
| BstX2I | RGATCY | 3 cut(s) | 805, 1396, 1696 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 466, 874, 1545 |
| BstYI | RGATCY | 3 cut(s) | 805, 1396, 1696 |
| Bsu15I | ATCGAT | 1 cut(s) | 648 |
| Bsu36I | CCTNAGG | 1 cut(s) | 438 |
| BsuI | GTATCC | 1 cut(s) | 631 |
| BsuRI | GGCC | 4 cut(s) | 353, 747, 1215, 1467 |
| BsuTUI | ATCGAT | 1 cut(s) | 648 |
| BtgI | CCRYGG | 2 cut(s) | 409, 1008 |
| BtsCI | GGATG | 5 cut(s) | 130, 590, 781, 1535, 1592 |
| BtsIMutI | CAGTG | 2 cut(s) | 550, 755 |
| Cac8I | GCNNGC | 2 cut(s) | 590, 1217 |
| Cfr13I | GGNCC | 3 cut(s) | 352, 1465, 1548 |
| ClaI | ATCGAT | 1 cut(s) | 648 |
| Csp6I | GTAC | 1 cut(s) | 922 |
| CviAII | CATG | 5 cut(s) | 70, 143, 529, 1009, 1478 |
| CviQI | GTAC | 1 cut(s) | 922 |
| DdeI | CTNAG | 6 cut(s) | 11, 189, 438, 785, 1197, 1508 |
| DpnI | GATC | 5 cut(s) | 407, 651, 807, 1398, 1698 |
| DpnII | GATC | 5 cut(s) | 405, 649, 805, 1396, 1696 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 255 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 255 |
| EaeI | YGGCCR | 1 cut(s) | 1213 |
| Eco105I | TACGTA | 1 cut(s) | 921 |
| Eco130I | CCWWGG | 1 cut(s) | 1008 |
| Eco24I | GRGCYC | 1 cut(s) | 1007 |
| Eco31I | GGTCTC | 1 cut(s) | 263 |
| Eco47I | GGWCC | 1 cut(s) | 1548 |
| Eco81I | CCTNAGG | 1 cut(s) | 438 |
| Eco88I | CYCGRG | 1 cut(s) | 22 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1465 |
| EcoRII | CCWGG | 1 cut(s) | 1595 |
| EcoT14I | CCWWGG | 1 cut(s) | 1008 |
| EcoT22I | ATGCAT | 2 cut(s) | 838, 1651 |
| EcoT38I | GRGCYC | 1 cut(s) | 1007 |
| ErhI | CCWWGG | 1 cut(s) | 1008 |
| FaeI | CATG | 5 cut(s) | 73, 146, 532, 1012, 1481 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1608, 1640 |
| FaqI | GGGAC | 1 cut(s) | 534 |
| FatI | CATG | 5 cut(s) | 69, 142, 528, 1008, 1477 |
| FauI | CCCGC | 1 cut(s) | 1156 |
| Fnu4HI | GCNGC | 8 cut(s) | 16, 19, 444, 549, 1213, 1505, 1709, 1712 |
| FokI | GGATG | 5 cut(s) | 137, 597, 788, 1542, 1579 |
| FriOI | GRGCYC | 1 cut(s) | 1007 |
| Fsp4HI | GCNGC | 8 cut(s) | 16, 19, 444, 549, 1213, 1505, 1709, 1712 |
| FspBI | CTAG | 5 cut(s) | 101, 743, 977, 996, 1205 |
| GluI | GCNGC | 8 cut(s) | 16, 19, 444, 549, 1213, 1505, 1709, 1712 |
| GsuI | CTGGAG | 1 cut(s) | 1521 |
| HaeIII | GGCC | 4 cut(s) | 353, 747, 1215, 1467 |
| HapII | CCGG | 1 cut(s) | 803 |
| Hin1I | GRCGYC | 1 cut(s) | 384 |
| Hin1II | CATG | 5 cut(s) | 73, 146, 532, 1012, 1481 |
| HincII | GTYRAC | 2 cut(s) | 61, 203 |
| HindII | GTYRAC | 2 cut(s) | 61, 203 |
| HinfI | GANTC | 6 cut(s) | 322, 732, 889, 1385, 1459, 1724 |
| HpaII | CCGG | 1 cut(s) | 803 |
| HphI | GGTGA | 3 cut(s) | 382, 448, 548 |
| Hpy166II | GTNNAC | 3 cut(s) | 61, 203, 1342 |
| Hpy188I | TCNGA | 8 cut(s) | 192, 266, 405, 567, 673, 1023, 1198, 1568 |
| Hpy188III | TCNNGA | 8 cut(s) | 24, 87, 275, 803, 1118, 1538, 1616, 1728 |
| Hpy8I | GTNNAC | 3 cut(s) | 61, 203, 1342 |
| Hpy99I | CGWCG | 1 cut(s) | 707 |
| HpyAV | CCTTC | 7 cut(s) | 127, 180, 403, 842, 1352, 1520, 1678 |
| HpyCH4III | ACNGT | 6 cut(s) | 545, 626, 941, 947, 1126, 1586 |
| HpyCH4IV | ACGT | 4 cut(s) | 384, 597, 702, 920 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 134, 744 |
| HpyF3I | CTNAG | 6 cut(s) | 11, 189, 438, 785, 1197, 1508 |
| HpySE526I | ACGT | 4 cut(s) | 384, 597, 702, 920 |
| Hsp92I | GRCGYC | 1 cut(s) | 384 |
| Hsp92II | CATG | 5 cut(s) | 73, 146, 532, 1012, 1481 |
| Kpn2I | TCCGGA | 1 cut(s) | 802 |
| Kzo9I | GATC | 5 cut(s) | 405, 649, 805, 1396, 1696 |
| LmnI | GCTCC | 3 cut(s) | 277, 700, 1010 |
| Lsp1109I | GCAGC | 6 cut(s) | 30, 430, 535, 1491, 1695, 1723 |
| LweI | GCATC | 6 cut(s) | 115, 575, 823, 1191, 1636, 1658 |
| MaeI | CTAG | 5 cut(s) | 101, 743, 977, 996, 1205 |
| MaeII | ACGT | 4 cut(s) | 384, 597, 702, 920 |
| MaeIII | GTNAC | 6 cut(s) | 536, 706, 916, 941, 1126, 1262 |
| MalI | GATC | 5 cut(s) | 407, 651, 807, 1398, 1698 |
| MboI | GATC | 5 cut(s) | 405, 649, 805, 1396, 1696 |
| MboII | GAAGA | 6 cut(s) | 30, 352, 365, 379, 580, 587 |
| MfeI | CAATTG | 1 cut(s) | 304 |
| MflI | RGATCY | 3 cut(s) | 805, 1396, 1696 |
| MhlI | GDGCHC | 1 cut(s) | 1007 |
| MlyI | GAGTC | 1 cut(s) | 741 |
| MmeI | TCCRAC | 2 cut(s) | 753, 1526 |
| Mph1103I | ATGCAT | 2 cut(s) | 838, 1651 |
| MroI | TCCGGA | 1 cut(s) | 802 |
| MroXI | GAANNNNTTC | 3 cut(s) | 137, 150, 1113 |
| MseI | TTAA | 5 cut(s) | 1014, 1299, 1329, 1484, 1577 |
| MslI | CAYNNNNRTG | 1 cut(s) | 461 |
| MspA1I | CMGCKG | 1 cut(s) | 1714 |
| MspI | CCGG | 1 cut(s) | 803 |
| MspR9I | CCNGG | 1 cut(s) | 1597 |
| MunI | CAATTG | 1 cut(s) | 304 |
| MvaI | CCWGG | 1 cut(s) | 1597 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 134, 744 |
| NcoI | CCATGG | 1 cut(s) | 1008 |
| NdeII | GATC | 5 cut(s) | 405, 649, 805, 1396, 1696 |
| NlaIII | CATG | 5 cut(s) | 73, 146, 532, 1012, 1481 |
| NlaIV | GGNNCC | 1 cut(s) | 1006 |
| NmuCI | GTSAC | 1 cut(s) | 536 |
| NsiI | ATGCAT | 2 cut(s) | 838, 1651 |
| PaeR7I | CTCGAG | 1 cut(s) | 22 |
| PdmI | GAANNNNTTC | 3 cut(s) | 137, 150, 1113 |
| PfeI | GAWTC | 5 cut(s) | 322, 889, 1385, 1459, 1724 |
| PflFI | GACNNNGTC | 1 cut(s) | 731 |
| PkrI | GCNGC | 8 cut(s) | 17, 20, 445, 550, 1214, 1506, 1710, 1713 |
| PleI | GAGTC | 1 cut(s) | 740 |
| PpsI | GAGTC | 1 cut(s) | 740 |
| Ppu21I | YACGTR | 1 cut(s) | 921 |
| PsiI | TTATAA | 1 cut(s) | 1134 |
| Psp6I | CCWGG | 1 cut(s) | 1595 |
| PspGI | CCWGG | 1 cut(s) | 1595 |
| PspN4I | GGNNCC | 1 cut(s) | 1006 |
| PspPI | GGNCC | 3 cut(s) | 352, 1465, 1548 |
| PstI | CTGCAG | 3 cut(s) | 232, 1645, 1713 |
| PsuI | RGATCY | 3 cut(s) | 805, 1396, 1696 |
| PsyI | GACNNNGTC | 1 cut(s) | 731 |
| PvuII | CAGCTG | 1 cut(s) | 1714 |
| RsaI | GTAC | 1 cut(s) | 923 |
| RsaNI | GTAC | 1 cut(s) | 922 |
| RseI | CAYNNNNRTG | 1 cut(s) | 461 |
| SaqAI | TTAA | 5 cut(s) | 1014, 1299, 1329, 1484, 1577 |
| SatI | GCNGC | 8 cut(s) | 16, 19, 444, 549, 1213, 1505, 1709, 1712 |
| Sau3AI | GATC | 5 cut(s) | 405, 649, 805, 1396, 1696 |
| Sau96I | GGNCC | 3 cut(s) | 352, 1465, 1548 |
| SchI | GAGTC | 1 cut(s) | 741 |
| ScrFI | CCNGG | 1 cut(s) | 1597 |
| SduI | GDGCHC | 1 cut(s) | 1007 |
| SfaNI | GCATC | 6 cut(s) | 115, 575, 823, 1191, 1636, 1658 |
| SfcI | CTRYAG | 3 cut(s) | 228, 1641, 1709 |
| Sfr274I | CTCGAG | 1 cut(s) | 22 |
| SinI | GGWCC | 1 cut(s) | 1548 |
| SlaI | CTCGAG | 1 cut(s) | 22 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 461 |
| SmlI | CTYRAG | 2 cut(s) | 22, 1625 |
| SmoI | CTYRAG | 2 cut(s) | 22, 1625 |
| SnaBI | TACGTA | 1 cut(s) | 921 |
| SpeI | ACTAGT | 1 cut(s) | 976 |
| SsiI | CCGC | 5 cut(s) | 16, 860, 1163, 1212, 1389 |
| SspI | AATATT | 1 cut(s) | 1333 |
| SspMI | CTAG | 5 cut(s) | 101, 743, 977, 996, 1205 |
| StyD4I | CCNGG | 1 cut(s) | 1595 |
| StyI | CCWWGG | 1 cut(s) | 1008 |
| TaaI | ACNGT | 6 cut(s) | 545, 626, 941, 947, 1126, 1586 |
| TaiI | ACGT | 4 cut(s) | 387, 600, 705, 923 |
| TaqI | TCGA | 7 cut(s) | 23, 86, 109, 621, 648, 1068, 1682 |
| TauI | GCSGC | 2 cut(s) | 18, 1215 |
| TfiI | GAWTC | 5 cut(s) | 322, 889, 1385, 1459, 1724 |
| Tru1I | TTAA | 5 cut(s) | 1014, 1299, 1329, 1484, 1577 |
| Tru9I | TTAA | 5 cut(s) | 1014, 1299, 1329, 1484, 1577 |
| TscAI | CASTG | 2 cut(s) | 550, 755 |
| TseFI | GTSAC | 1 cut(s) | 536 |
| TseI | GCWGC | 6 cut(s) | 18, 443, 548, 1504, 1708, 1711 |
| Tsp45I | GTSAC | 1 cut(s) | 536 |
| TspDTI | ATGAA | 6 cut(s) | 58, 71, 159, 674, 792, 1619 |
| TspGWI | ACGGA | 2 cut(s) | 170, 744 |
| TspRI | CASTG | 2 cut(s) | 550, 755 |
| Tth111I | GACNNNGTC | 1 cut(s) | 731 |
| VpaK11BI | GGWCC | 1 cut(s) | 1548 |
| XapI | RAATTY | 1 cut(s) | 450 |
| XhoI | CTCGAG | 1 cut(s) | 22 |
| XmnI | GAANNNNTTC | 3 cut(s) | 137, 150, 1113 |
| XspI | CTAG | 5 cut(s) | 101, 743, 977, 996, 1205 |
| ZraI | GACGTC | 1 cut(s) | 385 |
| Zsp2I | ATGCAT | 2 cut(s) | 838, 1651 |