Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1230 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 698 |
| AccI | GTMKAC | 1 cut(s) | 927 |
| AciI | CCGC | 6 cut(s) | 19, 263, 533, 539, 566, 1592 |
| AclWI | GGATC | 3 cut(s) | 1500, 1787, 1800 |
| AcoI | YGGCCR | 2 cut(s) | 324, 1309 |
| AcsI | RAATTY | 2 cut(s) | 452, 546 |
| AcuI | CTGAAG | 1 cut(s) | 252 |
| AfaI | GTAC | 1 cut(s) | 1704 |
| AhlI | ACTAGT | 2 cut(s) | 607, 739 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1612, 1644 |
| AluBI | AGCT | 6 cut(s) | 29, 680, 857, 1084, 1304, 1469 |
| AluI | AGCT | 6 cut(s) | 29, 680, 857, 1084, 1304, 1469 |
| Alw26I | GTCTC | 2 cut(s) | 1200, 1679 |
| AlwI | GGATC | 3 cut(s) | 1500, 1787, 1800 |
| AoxI | GGCC | 5 cut(s) | 324, 1170, 1309, 1351, 1576 |
| ApeKI | GCWGC | 5 cut(s) | 29, 51, 54, 181, 644 |
| ApoI | RAATTY | 2 cut(s) | 452, 546 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 280, 312 |
| AseI | ATTAAT | 1 cut(s) | 1557 |
| AspS9I | GGNCC | 2 cut(s) | 368, 1576 |
| AsuHPI | GGTGA | 2 cut(s) | 189, 892 |
| AvaII | GGWCC | 1 cut(s) | 368 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 726, 759 |
| BalI | TGGCCA | 1 cut(s) | 1311 |
| BamHI | GGATCC | 1 cut(s) | 1792 |
| BanII | GRGCYC | 1 cut(s) | 1103 |
| BbsI | GAAGAC | 1 cut(s) | 74 |
| BbvCI | CCTCAGC | 1 cut(s) | 5 |
| BbvI | GCAGC | 5 cut(s) | 16, 63, 66, 193, 631 |
| BccI | CCATC | 9 cut(s) | 57, 661, 943, 1028, 1099, 1343, 1396, 1631, 1693 |
| BceAI | ACGGC | 4 cut(s) | 311, 523, 1261, 1792 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 104, 138 |
| BciVI | GTATCC | 1 cut(s) | 727 |
| BclI | TGATCA | 1 cut(s) | 1812 |
| BcoDI | GTCTC | 2 cut(s) | 1200, 1679 |
| BcuI | ACTAGT | 2 cut(s) | 607, 739 |
| BfaI | CTAG | 7 cut(s) | 176, 585, 608, 695, 740, 1377, 1530 |
| BfmI | CTRYAG | 1 cut(s) | 1737 |
| BfuI | GTATCC | 1 cut(s) | 727 |
| BisI | GCNGC | 6 cut(s) | 30, 52, 55, 182, 540, 645 |
| BlpI | GCTNAGC | 1 cut(s) | 1091 |
| BlsI | GCNGC | 6 cut(s) | 31, 53, 56, 183, 541, 646 |
| Bme18I | GGWCC | 1 cut(s) | 368 |
| BmgT120I | GGNCC | 2 cut(s) | 368, 1576 |
| BmiI | GGNNCC | 3 cut(s) | 1212, 1577, 1794 |
| BmsI | GCATC | 7 cut(s) | 6, 211, 739, 1167, 1287, 1732, 1754 |
| BpiI | GAAGAC | 1 cut(s) | 74 |
| BpmI | CTGGAG | 1 cut(s) | 1617 |
| Bpu10I | CCTNAGC | 2 cut(s) | 5, 659 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1091 |
| BpuEI | CTTGAG | 1 cut(s) | 539 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 77, 107 |
| Bse1I | ACTGG | 3 cut(s) | 185, 1212, 1350 |
| Bse3DI | GCAATG | 1 cut(s) | 1389 |
| BseGI | GGATG | 7 cut(s) | 15, 226, 358, 812, 954, 1039, 1354 |
| BseMI | GCAATG | 1 cut(s) | 1389 |
| BseNI | ACTGG | 3 cut(s) | 185, 1212, 1350 |
| BseRI | GAGGAG | 1 cut(s) | 1065 |
| BseX3I | CGGCCG | 1 cut(s) | 324 |
| BseXI | GCAGC | 5 cut(s) | 16, 63, 66, 193, 631 |
| BsgI | GTGCAG | 1 cut(s) | 1226 |
| Bsh1285I | CGRYCG | 1 cut(s) | 327 |
| BshFI | GGCC | 5 cut(s) | 326, 1172, 1311, 1353, 1578 |
| BsiEI | CGRYCG | 1 cut(s) | 327 |
| BslFI | GGGAC | 1 cut(s) | 1218 |
| BsmAI | GTCTC | 2 cut(s) | 1200, 1679 |
| BsmFI | GGGAC | 1 cut(s) | 1218 |
| BsmI | GAATGC | 1 cut(s) | 249 |
| BsnI | GGCC | 5 cut(s) | 326, 1172, 1311, 1353, 1578 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1103 |
| Bsp143I | GATC | 3 cut(s) | 1492, 1792, 1812 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1091 |
| BspACI | CCGC | 6 cut(s) | 19, 263, 533, 539, 566, 1592 |
| BspANI | GGCC | 5 cut(s) | 326, 1172, 1311, 1353, 1578 |
| BspLI | GGNNCC | 3 cut(s) | 1212, 1577, 1794 |
| BspMAI | CTGCAG | 1 cut(s) | 1741 |
| BspPI | GGATC | 3 cut(s) | 1500, 1787, 1800 |
| BsrDI | GCAATG | 1 cut(s) | 1389 |
| BsrI | ACTGG | 3 cut(s) | 185, 1212, 1350 |
| BssMI | GATC | 3 cut(s) | 1492, 1792, 1812 |
| Bst6I | CTCTTC | 2 cut(s) | 767, 1242 |
| BstC8I | GCNNGC | 3 cut(s) | 682, 686, 1302 |
| BstDEI | CTNAG | 3 cut(s) | 5, 659, 1091 |
| BstF5I | GGATG | 7 cut(s) | 15, 226, 358, 812, 954, 1039, 1354 |
| BstKTI | GATC | 3 cut(s) | 1495, 1795, 1815 |
| BstMAI | GTCTC | 2 cut(s) | 1200, 1679 |
| BstMBI | GATC | 3 cut(s) | 1492, 1792, 1812 |
| BstMCI | CGRYCG | 1 cut(s) | 327 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 253, 262, 539, 840, 1260 |
| BstSFI | CTRYAG | 1 cut(s) | 1737 |
| BstV1I | GCAGC | 5 cut(s) | 16, 63, 66, 193, 631 |
| BstV2I | GAAGAC | 1 cut(s) | 74 |
| BstX2I | RGATCY | 2 cut(s) | 1492, 1792 |
| BstYI | RGATCY | 2 cut(s) | 1492, 1792 |
| BstZI | CGGCCG | 1 cut(s) | 324 |
| BsuI | GTATCC | 1 cut(s) | 727 |
| BsuRI | GGCC | 5 cut(s) | 326, 1172, 1311, 1353, 1578 |
| BtgZI | GCGATG | 1 cut(s) | 1712 |
| BtsCI | GGATG | 7 cut(s) | 15, 226, 358, 812, 954, 1039, 1354 |
| BtsIMutI | CAGTG | 4 cut(s) | 96, 133, 192, 1823 |
| Cac8I | GCNNGC | 3 cut(s) | 682, 686, 1302 |
| Cfr13I | GGNCC | 2 cut(s) | 368, 1576 |
| CseI | GACGC | 3 cut(s) | 245, 907, 1283 |
| Csp6I | GTAC | 1 cut(s) | 1703 |
| CviAII | CATG | 4 cut(s) | 625, 824, 1030, 1174 |
| CviQI | GTAC | 1 cut(s) | 1703 |
| DdeI | CTNAG | 3 cut(s) | 5, 659, 1091 |
| DpnI | GATC | 3 cut(s) | 1494, 1794, 1814 |
| DpnII | GATC | 3 cut(s) | 1492, 1792, 1812 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 698 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 698 |
| EaeI | YGGCCR | 2 cut(s) | 324, 1309 |
| EagI | CGGCCG | 1 cut(s) | 324 |
| Eam1104I | CTCTTC | 2 cut(s) | 767, 1242 |
| EarI | CTCTTC | 2 cut(s) | 767, 1242 |
| EciI | GGCGGA | 2 cut(s) | 252, 548 |
| EclXI | CGGCCG | 1 cut(s) | 324 |
| Eco24I | GRGCYC | 1 cut(s) | 1103 |
| Eco47I | GGWCC | 1 cut(s) | 368 |
| Eco52I | CGGCCG | 1 cut(s) | 324 |
| Eco57I | CTGAAG | 1 cut(s) | 252 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1576 |
| EcoT22I | ATGCAT | 2 cut(s) | 754, 1747 |
| EcoT38I | GRGCYC | 1 cut(s) | 1103 |
| FaeI | CATG | 4 cut(s) | 628, 827, 1033, 1177 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 453, 485 |
| FaqI | GGGAC | 1 cut(s) | 1218 |
| FatI | CATG | 4 cut(s) | 624, 823, 1029, 1173 |
| FauI | CCCGC | 1 cut(s) | 559 |
| FbaI | TGATCA | 1 cut(s) | 1812 |
| FblI | GTMKAC | 1 cut(s) | 927 |
| Fnu4HI | GCNGC | 6 cut(s) | 30, 52, 55, 182, 540, 645 |
| FokI | GGATG | 7 cut(s) | 22, 233, 365, 799, 961, 1046, 1361 |
| FriOI | GRGCYC | 1 cut(s) | 1103 |
| Fsp4HI | GCNGC | 6 cut(s) | 30, 52, 55, 182, 540, 645 |
| FspBI | CTAG | 7 cut(s) | 176, 585, 608, 695, 740, 1377, 1530 |
| GluI | GCNGC | 6 cut(s) | 30, 52, 55, 182, 540, 645 |
| GsuI | CTGGAG | 1 cut(s) | 1617 |
| HaeIII | GGCC | 5 cut(s) | 326, 1172, 1311, 1353, 1578 |
| HgaI | GACGC | 3 cut(s) | 245, 907, 1283 |
| Hin1II | CATG | 4 cut(s) | 628, 827, 1033, 1177 |
| HincII | GTYRAC | 1 cut(s) | 140 |
| HindII | GTYRAC | 1 cut(s) | 140 |
| HindIII | AAGCTT | 1 cut(s) | 1302 |
| HinfI | GANTC | 5 cut(s) | 820, 985, 1481, 1563, 1820 |
| HphI | GGTGA | 2 cut(s) | 189, 892 |
| Hpy166II | GTNNAC | 4 cut(s) | 140, 909, 928, 1025 |
| Hpy188I | TCNGA | 2 cut(s) | 769, 1664 |
| Hpy188III | TCNNGA | 7 cut(s) | 360, 470, 518, 1187, 1319, 1537, 1634 |
| Hpy8I | GTNNAC | 4 cut(s) | 140, 909, 928, 1025 |
| HpyAV | CCTTC | 7 cut(s) | 140, 153, 276, 668, 959, 1610, 1720 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 253, 262, 539, 840, 1260 |
| HpyF3I | CTNAG | 3 cut(s) | 5, 659, 1091 |
| Hsp92II | CATG | 4 cut(s) | 628, 827, 1033, 1177 |
| Ksp22I | TGATCA | 1 cut(s) | 1812 |
| Kzo9I | GATC | 3 cut(s) | 1492, 1792, 1812 |
| LmnI | GCTCC | 1 cut(s) | 677 |
| Lsp1109I | GCAGC | 5 cut(s) | 16, 63, 66, 193, 631 |
| LweI | GCATC | 7 cut(s) | 6, 211, 739, 1167, 1287, 1732, 1754 |
| MaeI | CTAG | 7 cut(s) | 176, 585, 608, 695, 740, 1377, 1530 |
| MaeIII | GTNAC | 5 cut(s) | 632, 1012, 1037, 1121, 1676 |
| MalI | GATC | 3 cut(s) | 1494, 1794, 1814 |
| MboI | GATC | 3 cut(s) | 1492, 1792, 1812 |
| MfeI | CAATTG | 1 cut(s) | 1388 |
| MflI | RGATCY | 2 cut(s) | 1492, 1792 |
| MhlI | GDGCHC | 1 cut(s) | 1103 |
| MlsI | TGGCCA | 1 cut(s) | 1311 |
| MluNI | TGGCCA | 1 cut(s) | 1311 |
| MlyI | GAGTC | 1 cut(s) | 1557 |
| MmeI | TCCRAC | 1 cut(s) | 1398 |
| Mox20I | TGGCCA | 1 cut(s) | 1311 |
| Mph1103I | ATGCAT | 2 cut(s) | 754, 1747 |
| MscI | TGGCCA | 1 cut(s) | 1311 |
| MseI | TTAA | 4 cut(s) | 755, 1110, 1452, 1557 |
| Msp20I | TGGCCA | 1 cut(s) | 1311 |
| MunI | CAATTG | 1 cut(s) | 1388 |
| Mva1269I | GAATGC | 1 cut(s) | 249 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 253, 262, 539, 840, 1260 |
| NdeII | GATC | 3 cut(s) | 1492, 1792, 1812 |
| NlaIII | CATG | 4 cut(s) | 628, 827, 1033, 1177 |
| NlaIV | GGNNCC | 3 cut(s) | 1212, 1577, 1794 |
| NsiI | ATGCAT | 2 cut(s) | 754, 1747 |
| PctI | GAATGC | 1 cut(s) | 249 |
| PfeI | GAWTC | 4 cut(s) | 820, 985, 1481, 1820 |
| PkrI | GCNGC | 6 cut(s) | 31, 53, 56, 183, 541, 646 |
| PleI | GAGTC | 1 cut(s) | 1557 |
| PpsI | GAGTC | 1 cut(s) | 1557 |
| PshBI | ATTAAT | 1 cut(s) | 1557 |
| PsiI | TTATAA | 1 cut(s) | 1230 |
| PspN4I | GGNNCC | 3 cut(s) | 1212, 1577, 1794 |
| PspPI | GGNCC | 2 cut(s) | 368, 1576 |
| PstI | CTGCAG | 1 cut(s) | 1741 |
| PsuI | RGATCY | 2 cut(s) | 1492, 1792 |
| RsaI | GTAC | 1 cut(s) | 1704 |
| RsaNI | GTAC | 1 cut(s) | 1703 |
| SaqAI | TTAA | 4 cut(s) | 755, 1110, 1452, 1557 |
| SatI | GCNGC | 6 cut(s) | 30, 52, 55, 182, 540, 645 |
| Sau3AI | GATC | 3 cut(s) | 1492, 1792, 1812 |
| Sau96I | GGNCC | 2 cut(s) | 368, 1576 |
| SchI | GAGTC | 1 cut(s) | 1557 |
| SduI | GDGCHC | 1 cut(s) | 1103 |
| SfaNI | GCATC | 7 cut(s) | 6, 211, 739, 1167, 1287, 1732, 1754 |
| SfcI | CTRYAG | 1 cut(s) | 1737 |
| SinI | GGWCC | 1 cut(s) | 368 |
| SmlI | CTYRAG | 1 cut(s) | 518 |
| SmoI | CTYRAG | 1 cut(s) | 518 |
| SpeI | ACTAGT | 2 cut(s) | 607, 739 |
| SsiI | CCGC | 6 cut(s) | 19, 263, 533, 539, 566, 1592 |
| SspI | AATATT | 1 cut(s) | 291 |
| SspMI | CTAG | 7 cut(s) | 176, 585, 608, 695, 740, 1377, 1530 |
| TaqI | TCGA | 4 cut(s) | 717, 1080, 1103, 1778 |
| TauI | GCSGC | 1 cut(s) | 542 |
| TfiI | GAWTC | 4 cut(s) | 820, 985, 1481, 1820 |
| Tru1I | TTAA | 4 cut(s) | 755, 1110, 1452, 1557 |
| Tru9I | TTAA | 4 cut(s) | 755, 1110, 1452, 1557 |
| TscAI | CASTG | 4 cut(s) | 103, 140, 192, 1830 |
| TseI | GCWGC | 5 cut(s) | 29, 51, 54, 181, 644 |
| TspDTI | ATGAA | 4 cut(s) | 641, 812, 888, 1800 |
| TspRI | CASTG | 4 cut(s) | 103, 140, 192, 1830 |
| VpaK11BI | GGWCC | 1 cut(s) | 368 |
| VspI | ATTAAT | 1 cut(s) | 1557 |
| XapI | RAATTY | 2 cut(s) | 452, 546 |
| XmiI | GTMKAC | 1 cut(s) | 927 |
| XspI | CTAG | 7 cut(s) | 176, 585, 608, 695, 740, 1377, 1530 |
| Zsp2I | ATGCAT | 2 cut(s) | 754, 1747 |