Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 140 |
| AclWI | GGATC | 2 cut(s) | 290, 303 |
| AcoI | YGGCCR | 1 cut(s) | 327 |
| AflII | CTTAAG | 1 cut(s) | 269 |
| AgsI | TTSAA | 2 cut(s) | 100, 203 |
| AjnI | CCWGG | 1 cut(s) | 258 |
| AluBI | AGCT | 1 cut(s) | 348 |
| AluI | AGCT | 1 cut(s) | 348 |
| AlwI | GGATC | 2 cut(s) | 290, 303 |
| AoxI | GGCC | 4 cut(s) | 70, 226, 255, 327 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 97, 129 |
| AspS9I | GGNCC | 1 cut(s) | 256 |
| AsuHPI | GGTGA | 1 cut(s) | 121 |
| BamHI | GGATCC | 1 cut(s) | 295 |
| BccI | CCATC | 3 cut(s) | 152, 172, 218 |
| BciT130I | CCWGG | 1 cut(s) | 260 |
| BfaI | CTAG | 1 cut(s) | 90 |
| BfrI | CTTAAG | 1 cut(s) | 269 |
| Bme1390I | CCNGG | 1 cut(s) | 260 |
| BmgT120I | GGNCC | 1 cut(s) | 256 |
| BmiI | GGNNCC | 1 cut(s) | 297 |
| BmrFI | CCNGG | 1 cut(s) | 260 |
| BsaJI | CCNNGG | 1 cut(s) | 258 |
| Bse1I | ACTGG | 1 cut(s) | 73 |
| BseBI | CCWGG | 1 cut(s) | 260 |
| BseDI | CCNNGG | 1 cut(s) | 258 |
| BseGI | GGATG | 2 cut(s) | 183, 229 |
| BseNI | ACTGG | 1 cut(s) | 73 |
| BshFI | GGCC | 4 cut(s) | 72, 228, 257, 329 |
| BsiSI | CCGG | 1 cut(s) | 330 |
| BsnI | GGCC | 4 cut(s) | 72, 228, 257, 329 |
| Bsp143I | GATC | 2 cut(s) | 83, 295 |
| BspANI | GGCC | 4 cut(s) | 72, 228, 257, 329 |
| BspLI | GGNNCC | 1 cut(s) | 297 |
| BspPI | GGATC | 2 cut(s) | 290, 303 |
| BspTI | CTTAAG | 1 cut(s) | 269 |
| BsrI | ACTGG | 1 cut(s) | 73 |
| BssECI | CCNNGG | 1 cut(s) | 258 |
| BssMI | GATC | 2 cut(s) | 83, 295 |
| Bst2UI | CCWGG | 1 cut(s) | 260 |
| Bst4CI | ACNGT | 1 cut(s) | 304 |
| BstAFI | CTTAAG | 1 cut(s) | 269 |
| BstF5I | GGATG | 2 cut(s) | 183, 229 |
| BstKTI | GATC | 2 cut(s) | 86, 298 |
| BstMBI | GATC | 2 cut(s) | 83, 295 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 69 |
| BstNI | CCWGG | 1 cut(s) | 260 |
| BstSCI | CCNGG | 1 cut(s) | 258 |
| BstX2I | RGATCY | 1 cut(s) | 295 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 248 |
| BstYI | RGATCY | 1 cut(s) | 295 |
| BsuRI | GGCC | 4 cut(s) | 72, 228, 257, 329 |
| BtsCI | GGATG | 2 cut(s) | 183, 229 |
| BtsIMutI | CAGTG | 2 cut(s) | 80, 151 |
| Cfr13I | GGNCC | 1 cut(s) | 256 |
| CviAII | CATG | 1 cut(s) | 53 |
| CviJI | RGCY | 6 cut(s) | 72, 228, 240, 257, 329, 348 |
| CviKI_1 | RGCY | 6 cut(s) | 72, 228, 240, 257, 329, 348 |
| DpnI | GATC | 2 cut(s) | 85, 297 |
| DpnII | GATC | 2 cut(s) | 83, 295 |
| EaeI | YGGCCR | 1 cut(s) | 327 |
| EcoRII | CCWGG | 1 cut(s) | 258 |
| FaeI | CATG | 1 cut(s) | 56 |
| FaiI | YATR | 6 cut(s) | 39, 54, 232, 254, 313, 326 |
| FatI | CATG | 1 cut(s) | 52 |
| FokI | GGATG | 2 cut(s) | 190, 236 |
| FspBI | CTAG | 1 cut(s) | 90 |
| HaeIII | GGCC | 4 cut(s) | 72, 228, 257, 329 |
| HapII | CCGG | 1 cut(s) | 330 |
| Hin1II | CATG | 1 cut(s) | 56 |
| HinfI | GANTC | 3 cut(s) | 49, 100, 112 |
| HpaII | CCGG | 1 cut(s) | 330 |
| HphI | GGTGA | 1 cut(s) | 121 |
| Hpy188III | TCNNGA | 1 cut(s) | 46 |
| HpyAV | CCTTC | 1 cut(s) | 52 |
| HpyCH4III | ACNGT | 1 cut(s) | 304 |
| HpyCH4IV | ACGT | 2 cut(s) | 27, 140 |
| HpyCH4V | TGCA | 2 cut(s) | 63, 343 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 69 |
| HpySE526I | ACGT | 2 cut(s) | 27, 140 |
| Hsp92II | CATG | 1 cut(s) | 56 |
| Kzo9I | GATC | 2 cut(s) | 83, 295 |
| LpnPI | CCDG | 4 cut(s) | 86, 245, 272, 343 |
| MaeI | CTAG | 1 cut(s) | 90 |
| MaeII | ACGT | 2 cut(s) | 27, 140 |
| MalI | GATC | 2 cut(s) | 85, 297 |
| MboI | GATC | 2 cut(s) | 83, 295 |
| MboII | GAAGA | 1 cut(s) | 289 |
| MflI | RGATCY | 1 cut(s) | 295 |
| MluCI | AATT | 1 cut(s) | 263 |
| MlyI | GAGTC | 1 cut(s) | 121 |
| MmeI | TCCRAC | 2 cut(s) | 273, 323 |
| MnlI | CCTC | 1 cut(s) | 166 |
| MseI | TTAA | 1 cut(s) | 270 |
| MspCI | CTTAAG | 1 cut(s) | 269 |
| MspI | CCGG | 1 cut(s) | 330 |
| MspR9I | CCNGG | 1 cut(s) | 260 |
| MvaI | CCWGG | 1 cut(s) | 260 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 69 |
| NdeII | GATC | 2 cut(s) | 83, 295 |
| NlaIII | CATG | 1 cut(s) | 56 |
| NlaIV | GGNNCC | 1 cut(s) | 297 |
| PfeI | GAWTC | 2 cut(s) | 49, 100 |
| PleI | GAGTC | 1 cut(s) | 120 |
| PpsI | GAGTC | 1 cut(s) | 120 |
| Psp1406I | AACGTT | 1 cut(s) | 140 |
| Psp6I | CCWGG | 1 cut(s) | 258 |
| PspGI | CCWGG | 1 cut(s) | 258 |
| PspN4I | GGNNCC | 1 cut(s) | 297 |
| PspPI | GGNCC | 1 cut(s) | 256 |
| PsuI | RGATCY | 1 cut(s) | 295 |
| SaqAI | TTAA | 1 cut(s) | 270 |
| Sau3AI | GATC | 2 cut(s) | 83, 295 |
| Sau96I | GGNCC | 1 cut(s) | 256 |
| SchI | GAGTC | 1 cut(s) | 121 |
| ScrFI | CCNGG | 1 cut(s) | 260 |
| SetI | ASST | 6 cut(s) | 30, 38, 44, 95, 143, 350 |
| SmlI | CTYRAG | 1 cut(s) | 269 |
| SmoI | CTYRAG | 1 cut(s) | 269 |
| Sse9I | AATT | 1 cut(s) | 263 |
| SspMI | CTAG | 1 cut(s) | 90 |
| StyD4I | CCNGG | 1 cut(s) | 258 |
| TaaI | ACNGT | 1 cut(s) | 304 |
| TaiI | ACGT | 2 cut(s) | 30, 143 |
| TasI | AATT | 1 cut(s) | 263 |
| TfiI | GAWTC | 2 cut(s) | 49, 100 |
| Tru1I | TTAA | 1 cut(s) | 270 |
| Tru9I | TTAA | 1 cut(s) | 270 |
| TscAI | CASTG | 2 cut(s) | 80, 151 |
| TspDTI | ATGAA | 1 cut(s) | 41 |
| TspRI | CASTG | 2 cut(s) | 80, 151 |
| Vha464I | CTTAAG | 1 cut(s) | 269 |
| XspI | CTAG | 1 cut(s) | 90 |