Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 758 |
| AciI | CCGC | 3 cut(s) | 184, 758, 1394 |
| AclWI | GGATC | 1 cut(s) | 1589 |
| AcoI | YGGCCR | 1 cut(s) | 1111 |
| AcsI | RAATTY | 1 cut(s) | 1621 |
| AcuI | CTGAAG | 1 cut(s) | 39 |
| AcyI | GRCGYC | 1 cut(s) | 163 |
| AfaI | GTAC | 1 cut(s) | 17 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1004 |
| AhlI | ACTAGT | 1 cut(s) | 541 |
| AjnI | CCWGG | 2 cut(s) | 81, 490 |
| AluBI | AGCT | 2 cut(s) | 659, 1271 |
| AluI | AGCT | 2 cut(s) | 659, 1271 |
| Alw26I | GTCTC | 2 cut(s) | 266, 1060 |
| AlwI | GGATC | 1 cut(s) | 1589 |
| AoxI | GGCC | 4 cut(s) | 202, 643, 1111, 1378 |
| ApeKI | GCWGC | 1 cut(s) | 424 |
| ApoI | RAATTY | 1 cut(s) | 1621 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 140, 153, 274 |
| AspS9I | GGNCC | 3 cut(s) | 95, 202, 1446 |
| AsuC2I | CCSGG | 1 cut(s) | 1466 |
| AsuHPI | GGTGA | 3 cut(s) | 385, 694, 703 |
| AsuII | TTCGAA | 1 cut(s) | 1129 |
| AvaII | GGWCC | 2 cut(s) | 95, 1446 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 528, 561 |
| BalI | TGGCCA | 1 cut(s) | 1113 |
| BanII | GRGCYC | 1 cut(s) | 905 |
| BbsI | GAAGAC | 3 cut(s) | 368, 382, 1291 |
| BbvCI | CCTCAGC | 1 cut(s) | 419 |
| BbvI | GCAGC | 1 cut(s) | 436 |
| BccI | CCATC | 3 cut(s) | 463, 521, 1040 |
| BceAI | ACGGC | 2 cut(s) | 157, 1456 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 499, 533 |
| BciT130I | CCWGG | 2 cut(s) | 83, 492 |
| BciVI | GTATCC | 1 cut(s) | 529 |
| BcnI | CCSGG | 1 cut(s) | 1466 |
| BcoDI | GTCTC | 2 cut(s) | 266, 1060 |
| BcuI | ACTAGT | 1 cut(s) | 541 |
| BfaI | CTAG | 2 cut(s) | 542, 1305 |
| BfmI | CTRYAG | 3 cut(s) | 231, 505, 1539 |
| BfuI | GTATCC | 1 cut(s) | 529 |
| BisI | GCNGC | 1 cut(s) | 425 |
| BlsI | GCNGC | 1 cut(s) | 426 |
| Bme1390I | CCNGG | 3 cut(s) | 83, 492, 1466 |
| Bme18I | GGWCC | 2 cut(s) | 95, 1446 |
| BmgT120I | GGNCC | 3 cut(s) | 95, 202, 1446 |
| BmiI | GGNNCC | 3 cut(s) | 97, 560, 904 |
| BmrFI | CCNGG | 3 cut(s) | 83, 492, 1466 |
| BmrI | ACTGGG | 1 cut(s) | 378 |
| BmsI | GCATC | 9 cut(s) | 118, 271, 473, 721, 1089, 1141, 1499, 1534, 1556 |
| BmuI | ACTGGG | 1 cut(s) | 378 |
| BpiI | GAAGAC | 3 cut(s) | 368, 382, 1291 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1286, 1318 |
| BpmI | CTGGAG | 1 cut(s) | 579 |
| Bpu10I | CCTNAGC | 1 cut(s) | 419 |
| Bpu14I | TTCGAA | 1 cut(s) | 1129 |
| BpuMI | CCSGG | 1 cut(s) | 1466 |
| Bsa29I | ATCGAT | 1 cut(s) | 966 |
| BsaHI | GRCGYC | 1 cut(s) | 163 |
| BsaI | GGTCTC | 1 cut(s) | 266 |
| BsaJI | CCNNGG | 4 cut(s) | 81, 906, 1465, 1581 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1004 |
| Bse118I | RCCGGY | 1 cut(s) | 645 |
| Bse1I | ACTGG | 1 cut(s) | 384 |
| BseBI | CCWGG | 2 cut(s) | 83, 492 |
| BseCI | ATCGAT | 1 cut(s) | 966 |
| BseDI | CCNNGG | 4 cut(s) | 81, 906, 1465, 1581 |
| BseGI | GGATG | 3 cut(s) | 133, 488, 1117 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1004 |
| BseMII | CTCAG | 1 cut(s) | 410 |
| BseNI | ACTGG | 1 cut(s) | 384 |
| BseRI | GAGGAG | 3 cut(s) | 698, 867, 1078 |
| BseXI | GCAGC | 1 cut(s) | 436 |
| BseYI | CCCAGC | 1 cut(s) | 1271 |
| Bsh1236I | CGCG | 1 cut(s) | 758 |
| BshFI | GGCC | 4 cut(s) | 204, 645, 1113, 1380 |
| BshVI | ATCGAT | 1 cut(s) | 966 |
| BsiSI | CCGG | 2 cut(s) | 646, 1465 |
| BslFI | GGGAC | 3 cut(s) | 369, 1377, 1518 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1004 |
| BsmAI | GTCTC | 2 cut(s) | 266, 1060 |
| BsmFI | GGGAC | 3 cut(s) | 369, 1377, 1518 |
| BsnI | GGCC | 4 cut(s) | 204, 645, 1113, 1380 |
| Bso31I | GGTCTC | 1 cut(s) | 266 |
| Bsp119I | TTCGAA | 1 cut(s) | 1129 |
| Bsp1286I | GDGCHC | 1 cut(s) | 905 |
| Bsp143I | GATC | 3 cut(s) | 883, 963, 1594 |
| Bsp19I | CCATGG | 1 cut(s) | 906 |
| BspACI | CCGC | 3 cut(s) | 184, 758, 1394 |
| BspANI | GGCC | 4 cut(s) | 204, 645, 1113, 1380 |
| BspCNI | CTCAG | 1 cut(s) | 411 |
| BspDI | ATCGAT | 1 cut(s) | 966 |
| BspFNI | CGCG | 1 cut(s) | 758 |
| BspHI | TCATGA | 1 cut(s) | 1625 |
| BspLI | GGNNCC | 3 cut(s) | 97, 560, 904 |
| BspMAI | CTGCAG | 2 cut(s) | 235, 1543 |
| BspPI | GGATC | 1 cut(s) | 1589 |
| BspT104I | TTCGAA | 1 cut(s) | 1129 |
| BspTNI | GGTCTC | 1 cut(s) | 266 |
| BsrFI | RCCGGY | 1 cut(s) | 645 |
| BsrI | ACTGG | 1 cut(s) | 384 |
| BssAI | RCCGGY | 1 cut(s) | 645 |
| BssECI | CCNNGG | 4 cut(s) | 81, 906, 1465, 1581 |
| BssMI | GATC | 3 cut(s) | 883, 963, 1594 |
| BssNI | GRCGYC | 1 cut(s) | 163 |
| BssT1I | CCWWGG | 2 cut(s) | 906, 1581 |
| Bst2UI | CCWGG | 2 cut(s) | 83, 492 |
| Bst4CI | ACNGT | 5 cut(s) | 298, 524, 839, 845, 1376 |
| Bst6I | CTCTTC | 1 cut(s) | 280 |
| BstACI | GRCGYC | 1 cut(s) | 163 |
| BstBI | TTCGAA | 1 cut(s) | 1129 |
| BstC8I | GCNNGC | 1 cut(s) | 488 |
| BstDEI | CTNAG | 4 cut(s) | 419, 1001, 1196, 1384 |
| BstDSI | CCRYGG | 1 cut(s) | 906 |
| BstF5I | GGATG | 3 cut(s) | 133, 488, 1117 |
| BstFNI | CGCG | 1 cut(s) | 758 |
| BstKTI | GATC | 3 cut(s) | 886, 966, 1597 |
| BstMAI | GTCTC | 2 cut(s) | 266, 1060 |
| BstMBI | GATC | 3 cut(s) | 883, 963, 1594 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 169, 424, 492, 642, 1496 |
| BstNI | CCWGG | 2 cut(s) | 83, 492 |
| BstSCI | CCNGG | 3 cut(s) | 81, 490, 1464 |
| BstSFI | CTRYAG | 3 cut(s) | 231, 505, 1539 |
| BstUI | CGCG | 1 cut(s) | 758 |
| BstV1I | GCAGC | 1 cut(s) | 436 |
| BstV2I | GAAGAC | 3 cut(s) | 368, 382, 1291 |
| BstX2I | RGATCY | 1 cut(s) | 1594 |
| BstYI | RGATCY | 1 cut(s) | 1594 |
| Bsu15I | ATCGAT | 1 cut(s) | 966 |
| BsuI | GTATCC | 1 cut(s) | 529 |
| BsuRI | GGCC | 4 cut(s) | 204, 645, 1113, 1380 |
| BsuTUI | ATCGAT | 1 cut(s) | 966 |
| BtgI | CCRYGG | 1 cut(s) | 906 |
| BtsCI | GGATG | 3 cut(s) | 133, 488, 1117 |
| BtsIMutI | CAGTG | 1 cut(s) | 391 |
| Cac8I | GCNNGC | 1 cut(s) | 488 |
| CciI | TCATGA | 1 cut(s) | 1625 |
| Cfr10I | RCCGGY | 1 cut(s) | 645 |
| Cfr13I | GGNCC | 3 cut(s) | 95, 202, 1446 |
| ClaI | ATCGAT | 1 cut(s) | 966 |
| CseI | GACGC | 1 cut(s) | 152 |
| Csp6I | GTAC | 1 cut(s) | 16 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1024, 1059 |
| CviAII | CATG | 2 cut(s) | 907, 1626 |
| CviQI | GTAC | 1 cut(s) | 16 |
| DdeI | CTNAG | 4 cut(s) | 419, 1001, 1196, 1384 |
| DpnI | GATC | 3 cut(s) | 885, 965, 1596 |
| DpnII | GATC | 3 cut(s) | 883, 963, 1594 |
| DraI | TTTAAA | 1 cut(s) | 367 |
| EaeI | YGGCCR | 1 cut(s) | 1111 |
| Eam1104I | CTCTTC | 1 cut(s) | 280 |
| EarI | CTCTTC | 1 cut(s) | 280 |
| Eco130I | CCWWGG | 2 cut(s) | 906, 1581 |
| Eco24I | GRGCYC | 1 cut(s) | 905 |
| Eco31I | GGTCTC | 1 cut(s) | 266 |
| Eco32I | GATATC | 1 cut(s) | 1021 |
| Eco47I | GGWCC | 2 cut(s) | 95, 1446 |
| Eco57I | CTGAAG | 1 cut(s) | 39 |
| EcoRII | CCWGG | 2 cut(s) | 81, 490 |
| EcoRV | GATATC | 1 cut(s) | 1021 |
| EcoT14I | CCWWGG | 2 cut(s) | 906, 1581 |
| EcoT22I | ATGCAT | 1 cut(s) | 1549 |
| EcoT38I | GRGCYC | 1 cut(s) | 905 |
| ErhI | CCWWGG | 2 cut(s) | 906, 1581 |
| FaeI | CATG | 2 cut(s) | 910, 1629 |
| FaqI | GGGAC | 3 cut(s) | 369, 1377, 1518 |
| FatI | CATG | 2 cut(s) | 906, 1625 |
| Fnu4HI | GCNGC | 1 cut(s) | 425 |
| FokI | GGATG | 3 cut(s) | 140, 495, 1104 |
| FriOI | GRGCYC | 1 cut(s) | 905 |
| Fsp4HI | GCNGC | 1 cut(s) | 425 |
| FspBI | CTAG | 2 cut(s) | 542, 1305 |
| GluI | GCNGC | 1 cut(s) | 425 |
| GsaI | CCCAGC | 1 cut(s) | 1275 |
| GsuI | CTGGAG | 1 cut(s) | 579 |
| HaeIII | GGCC | 4 cut(s) | 204, 645, 1113, 1380 |
| HapII | CCGG | 2 cut(s) | 646, 1465 |
| HgaI | GACGC | 1 cut(s) | 152 |
| Hin1I | GRCGYC | 1 cut(s) | 163 |
| Hin1II | CATG | 2 cut(s) | 910, 1629 |
| HinfI | GANTC | 6 cut(s) | 270, 622, 685, 703, 787, 1283 |
| HpaII | CCGG | 2 cut(s) | 646, 1465 |
| HphI | GGTGA | 3 cut(s) | 385, 694, 703 |
| Hpy166II | GTNNAC | 2 cut(s) | 1240, 1341 |
| Hpy188I | TCNGA | 7 cut(s) | 58, 269, 280, 571, 702, 921, 1096 |
| Hpy188III | TCNNGA | 4 cut(s) | 596, 1514, 1525, 1626 |
| Hpy8I | GTNNAC | 2 cut(s) | 1240, 1341 |
| HpyAV | CCTTC | 6 cut(s) | 130, 164, 406, 724, 1201, 1250 |
| HpyCH4III | ACNGT | 5 cut(s) | 298, 524, 839, 845, 1376 |
| HpyCH4IV | ACGT | 2 cut(s) | 70, 600 |
| HpyCH4V | TGCA | 9 cut(s) | 233, 486, 636, 734, 951, 1102, 1289, 1541, 1547 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 169, 424, 492, 642, 1496 |
| HpyF3I | CTNAG | 4 cut(s) | 419, 1001, 1196, 1384 |
| HpySE526I | ACGT | 2 cut(s) | 70, 600 |
| Hsp92I | GRCGYC | 1 cut(s) | 163 |
| Hsp92II | CATG | 2 cut(s) | 910, 1629 |
| Kzo9I | GATC | 3 cut(s) | 883, 963, 1594 |
| LmnI | GCTCC | 3 cut(s) | 450, 598, 908 |
| Lsp1109I | GCAGC | 1 cut(s) | 436 |
| LweI | GCATC | 9 cut(s) | 118, 271, 473, 721, 1089, 1141, 1499, 1534, 1556 |
| MaeI | CTAG | 2 cut(s) | 542, 1305 |
| MaeII | ACGT | 2 cut(s) | 70, 600 |
| MaeIII | GTNAC | 6 cut(s) | 456, 604, 839, 926, 1012, 1370 |
| MalI | GATC | 3 cut(s) | 885, 965, 1596 |
| MboI | GATC | 3 cut(s) | 883, 963, 1594 |
| MboII | GAAGA | 6 cut(s) | 45, 267, 368, 382, 485, 1291 |
| MfeI | CAATTG | 1 cut(s) | 307 |
| MflI | RGATCY | 1 cut(s) | 1594 |
| MhlI | GDGCHC | 1 cut(s) | 905 |
| MlsI | TGGCCA | 1 cut(s) | 1113 |
| MluCI | AATT | 9 cut(s) | 307, 359, 368, 798, 823, 1190, 1458, 1570, 1621 |
| MluNI | TGGCCA | 1 cut(s) | 1113 |
| MlyI | GAGTC | 1 cut(s) | 694 |
| MmeI | TCCRAC | 1 cut(s) | 1200 |
| Mox20I | TGGCCA | 1 cut(s) | 1113 |
| Mph1103I | ATGCAT | 1 cut(s) | 1549 |
| MroXI | GAANNNNTTC | 3 cut(s) | 140, 153, 274 |
| MscI | TGGCCA | 1 cut(s) | 1113 |
| MseI | TTAA | 4 cut(s) | 366, 939, 1562, 1569 |
| MslI | CAYNNNNRTG | 1 cut(s) | 779 |
| Msp20I | TGGCCA | 1 cut(s) | 1113 |
| MspI | CCGG | 2 cut(s) | 646, 1465 |
| MspR9I | CCNGG | 3 cut(s) | 83, 492, 1466 |
| MunI | CAATTG | 1 cut(s) | 307 |
| MvaI | CCWGG | 2 cut(s) | 83, 492 |
| MvnI | CGCG | 1 cut(s) | 758 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 169, 424, 492, 642, 1496 |
| NciI | CCSGG | 1 cut(s) | 1466 |
| NcoI | CCATGG | 1 cut(s) | 906 |
| NdeII | GATC | 3 cut(s) | 883, 963, 1594 |
| NlaIII | CATG | 2 cut(s) | 910, 1629 |
| NlaIV | GGNNCC | 3 cut(s) | 97, 560, 904 |
| NsiI | ATGCAT | 1 cut(s) | 1549 |
| NspV | TTCGAA | 1 cut(s) | 1129 |
| PagI | TCATGA | 1 cut(s) | 1625 |
| PdmI | GAANNNNTTC | 3 cut(s) | 140, 153, 274 |
| PfeI | GAWTC | 5 cut(s) | 270, 622, 703, 787, 1283 |
| PkrI | GCNGC | 1 cut(s) | 426 |
| PleI | GAGTC | 1 cut(s) | 693 |
| PpsI | GAGTC | 1 cut(s) | 693 |
| Psp6I | CCWGG | 2 cut(s) | 81, 490 |
| PspFI | CCCAGC | 1 cut(s) | 1271 |
| PspGI | CCWGG | 2 cut(s) | 81, 490 |
| PspN4I | GGNNCC | 3 cut(s) | 97, 560, 904 |
| PspPI | GGNCC | 3 cut(s) | 95, 202, 1446 |
| PstI | CTGCAG | 2 cut(s) | 235, 1543 |
| PsuI | RGATCY | 1 cut(s) | 1594 |
| RsaI | GTAC | 1 cut(s) | 17 |
| RsaNI | GTAC | 1 cut(s) | 16 |
| RseI | CAYNNNNRTG | 1 cut(s) | 779 |
| SaqAI | TTAA | 4 cut(s) | 366, 939, 1562, 1569 |
| SatI | GCNGC | 1 cut(s) | 425 |
| Sau3AI | GATC | 3 cut(s) | 883, 963, 1594 |
| Sau96I | GGNCC | 3 cut(s) | 95, 202, 1446 |
| SchI | GAGTC | 1 cut(s) | 694 |
| ScrFI | CCNGG | 3 cut(s) | 83, 492, 1466 |
| SduI | GDGCHC | 1 cut(s) | 905 |
| SfaNI | GCATC | 9 cut(s) | 118, 271, 473, 721, 1089, 1141, 1499, 1534, 1556 |
| SfcI | CTRYAG | 3 cut(s) | 231, 505, 1539 |
| SfuI | TTCGAA | 1 cut(s) | 1129 |
| SinI | GGWCC | 2 cut(s) | 95, 1446 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 779 |
| SpeI | ACTAGT | 1 cut(s) | 541 |
| Sse9I | AATT | 9 cut(s) | 307, 359, 368, 798, 823, 1190, 1458, 1570, 1621 |
| SsiI | CCGC | 3 cut(s) | 184, 758, 1394 |
| SspI | AATATT | 3 cut(s) | 982, 1126, 1231 |
| SspMI | CTAG | 2 cut(s) | 542, 1305 |
| StyD4I | CCNGG | 3 cut(s) | 81, 490, 1464 |
| StyI | CCWWGG | 2 cut(s) | 906, 1581 |
| TaaI | ACNGT | 5 cut(s) | 298, 524, 839, 845, 1376 |
| TaiI | ACGT | 2 cut(s) | 73, 603 |
| TaqI | TCGA | 5 cut(s) | 144, 519, 966, 1129, 1524 |
| TasI | AATT | 9 cut(s) | 307, 359, 368, 798, 823, 1190, 1458, 1570, 1621 |
| TfiI | GAWTC | 5 cut(s) | 270, 622, 703, 787, 1283 |
| Tru1I | TTAA | 4 cut(s) | 366, 939, 1562, 1569 |
| Tru9I | TTAA | 4 cut(s) | 366, 939, 1562, 1569 |
| TscAI | CASTG | 1 cut(s) | 391 |
| TseI | GCWGC | 1 cut(s) | 424 |
| TspDTI | ATGAA | 7 cut(s) | 32, 162, 564, 690, 1220, 1500, 1614 |
| TspGWI | ACGGA | 1 cut(s) | 1571 |
| TspRI | CASTG | 1 cut(s) | 391 |
| VpaK11BI | GGWCC | 2 cut(s) | 95, 1446 |
| XapI | RAATTY | 1 cut(s) | 1621 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 89 |
| XmnI | GAANNNNTTC | 3 cut(s) | 140, 153, 274 |
| XspI | CTAG | 2 cut(s) | 542, 1305 |
| Zsp2I | ATGCAT | 1 cut(s) | 1549 |