Pentatricopeptide repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Glyco_hydro_1 | PF00232 | 52 - 86 | 2.6e-07 | Glycosyl hydrolase family 1 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 74, 93 |
| AcsI | RAATTY | 3 cut(s) | 79, 112, 227 |
| AfaI | GTAC | 2 cut(s) | 124, 247 |
| AgsI | TTSAA | 3 cut(s) | 112, 145, 212 |
| ApeKI | GCWGC | 2 cut(s) | 200, 218 |
| ApoI | RAATTY | 3 cut(s) | 79, 112, 227 |
| AspS9I | GGNCC | 1 cut(s) | 239 |
| AvaII | GGWCC | 1 cut(s) | 239 |
| BbvI | GCAGC | 2 cut(s) | 187, 230 |
| BisI | GCNGC | 3 cut(s) | 75, 201, 219 |
| BlsI | GCNGC | 3 cut(s) | 76, 202, 220 |
| BmcAI | AGTACT | 1 cut(s) | 124 |
| Bme18I | GGWCC | 1 cut(s) | 239 |
| BmgT120I | GGNCC | 1 cut(s) | 239 |
| BsaJI | CCNNGG | 1 cut(s) | 23 |
| BseDI | CCNNGG | 1 cut(s) | 23 |
| BseGI | GGATG | 1 cut(s) | 259 |
| BseXI | GCAGC | 2 cut(s) | 187, 230 |
| BsgI | GTGCAG | 1 cut(s) | 186 |
| Bsp19I | CCATGG | 1 cut(s) | 23 |
| BspACI | CCGC | 2 cut(s) | 74, 93 |
| BssECI | CCNNGG | 1 cut(s) | 23 |
| BssT1I | CCWWGG | 1 cut(s) | 23 |
| Bst4CI | ACNGT | 1 cut(s) | 88 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 19 |
| BstDSI | CCRYGG | 1 cut(s) | 23 |
| BstF5I | GGATG | 1 cut(s) | 259 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 10, 19, 74, 197 |
| BstV1I | GCAGC | 2 cut(s) | 187, 230 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 249 |
| BtgI | CCRYGG | 1 cut(s) | 23 |
| BtsCI | GGATG | 1 cut(s) | 259 |
| Cfr13I | GGNCC | 1 cut(s) | 239 |
| Csp6I | GTAC | 2 cut(s) | 123, 246 |
| CviAII | CATG | 2 cut(s) | 24, 249 |
| CviJI | RGCY | 4 cut(s) | 28, 41, 191, 221 |
| CviKI_1 | RGCY | 4 cut(s) | 28, 41, 191, 221 |
| CviQI | GTAC | 2 cut(s) | 123, 246 |
| DraI | TTTAAA | 1 cut(s) | 117 |
| EciI | GGCGGA | 1 cut(s) | 108 |
| Eco130I | CCWWGG | 1 cut(s) | 23 |
| Eco47I | GGWCC | 1 cut(s) | 239 |
| EcoT14I | CCWWGG | 1 cut(s) | 23 |
| ErhI | CCWWGG | 1 cut(s) | 23 |
| FaeI | CATG | 2 cut(s) | 27, 252 |
| FaiI | YATR | 2 cut(s) | 25, 250 |
| FatI | CATG | 2 cut(s) | 23, 248 |
| Fnu4HI | GCNGC | 3 cut(s) | 75, 201, 219 |
| FokI | GGATG | 1 cut(s) | 266 |
| Fsp4HI | GCNGC | 3 cut(s) | 75, 201, 219 |
| GluI | GCNGC | 3 cut(s) | 75, 201, 219 |
| Hin1II | CATG | 2 cut(s) | 27, 252 |
| Hpy188I | TCNGA | 2 cut(s) | 107, 160 |
| HpyAV | CCTTC | 1 cut(s) | 206 |
| HpyCH4III | ACNGT | 1 cut(s) | 88 |
| HpyCH4IV | ACGT | 1 cut(s) | 266 |
| HpyCH4V | TGCA | 2 cut(s) | 68, 203 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 10, 19, 74, 197 |
| HpySE526I | ACGT | 1 cut(s) | 266 |
| Hsp92II | CATG | 2 cut(s) | 27, 252 |
| LpnPI | CCDG | 1 cut(s) | 45 |
| Lsp1109I | GCAGC | 2 cut(s) | 187, 230 |
| MaeII | ACGT | 1 cut(s) | 266 |
| MaeIII | GTNAC | 1 cut(s) | 148 |
| MluCI | AATT | 5 cut(s) | 79, 112, 140, 172, 227 |
| MnlI | CCTC | 2 cut(s) | 31, 230 |
| MseI | TTAA | 1 cut(s) | 116 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 10, 19, 74, 197 |
| NcoI | CCATGG | 1 cut(s) | 23 |
| NlaIII | CATG | 2 cut(s) | 27, 252 |
| PkrI | GCNGC | 3 cut(s) | 76, 202, 220 |
| PspPI | GGNCC | 1 cut(s) | 239 |
| RsaI | GTAC | 2 cut(s) | 124, 247 |
| RsaNI | GTAC | 2 cut(s) | 123, 246 |
| SaqAI | TTAA | 1 cut(s) | 116 |
| SatI | GCNGC | 3 cut(s) | 75, 201, 219 |
| Sau96I | GGNCC | 1 cut(s) | 239 |
| ScaI | AGTACT | 1 cut(s) | 124 |
| SetI | ASST | 1 cut(s) | 269 |
| SgeI | CNNG | 6 cut(s) | 36, 44, 49, 60, 255, 261 |
| SinI | GGWCC | 1 cut(s) | 239 |
| SmiI | ATTTAAAT | 1 cut(s) | 117 |
| Sse9I | AATT | 5 cut(s) | 79, 112, 140, 172, 227 |
| SsiI | CCGC | 2 cut(s) | 74, 93 |
| StyI | CCWWGG | 1 cut(s) | 23 |
| SwaI | ATTTAAAT | 1 cut(s) | 117 |
| TaaI | ACNGT | 1 cut(s) | 88 |
| TaiI | ACGT | 1 cut(s) | 269 |
| TaqI | TCGA | 1 cut(s) | 36 |
| TasI | AATT | 5 cut(s) | 79, 112, 140, 172, 227 |
| TatI | WGTACW | 2 cut(s) | 122, 245 |
| TauI | GCSGC | 1 cut(s) | 77 |
| Tru1I | TTAA | 1 cut(s) | 116 |
| Tru9I | TTAA | 1 cut(s) | 116 |
| TseI | GCWGC | 2 cut(s) | 200, 218 |
| TspDTI | ATGAA | 1 cut(s) | 117 |
| VpaK11BI | GGWCC | 1 cut(s) | 239 |
| XapI | RAATTY | 3 cut(s) | 79, 112, 227 |
| ZrmI | AGTACT | 1 cut(s) | 124 |