Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 222, 747 |
| AccII | CGCG | 1 cut(s) | 143 |
| AciI | CCGC | 2 cut(s) | 1214, 1340 |
| AclWI | GGATC | 2 cut(s) | 1017, 1304 |
| AfaI | GTAC | 4 cut(s) | 91, 121, 425, 1166 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 130 |
| AflII | CTTAAG | 1 cut(s) | 176 |
| AflIII | ACRYGT | 1 cut(s) | 1100 |
| AluBI | AGCT | 3 cut(s) | 374, 670, 986 |
| AluI | AGCT | 3 cut(s) | 374, 670, 986 |
| Alw26I | GTCTC | 1 cut(s) | 717 |
| AlwI | GGATC | 2 cut(s) | 1017, 1304 |
| Ama87I | CYCGRG | 1 cut(s) | 893 |
| AoxI | GGCC | 3 cut(s) | 48, 133, 868 |
| ApeKI | GCWGC | 5 cut(s) | 5, 14, 56, 59, 161 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 278 |
| AspLEI | GCGC | 1 cut(s) | 143 |
| AspS9I | GGNCC | 2 cut(s) | 133, 469 |
| AsuC2I | CCSGG | 1 cut(s) | 691 |
| AsuHPI | GGTGA | 2 cut(s) | 409, 1228 |
| AvaI | CYCGRG | 1 cut(s) | 893 |
| AvaII | GGWCC | 1 cut(s) | 469 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 243, 276 |
| BbvI | GCAGC | 5 cut(s) | 17, 26, 68, 71, 173 |
| BccI | CCATC | 6 cut(s) | 178, 545, 755, 769, 860, 913 |
| BceAI | ACGGC | 1 cut(s) | 673 |
| BciVI | GTATCC | 1 cut(s) | 687 |
| BcnI | CCSGG | 1 cut(s) | 691 |
| BcoDI | GTCTC | 1 cut(s) | 717 |
| BfaI | CTAG | 2 cut(s) | 125, 257 |
| BfmI | CTRYAG | 2 cut(s) | 159, 1254 |
| BfrI | CTTAAG | 1 cut(s) | 176 |
| BfuI | GTATCC | 1 cut(s) | 687 |
| BisI | GCNGC | 5 cut(s) | 6, 15, 57, 60, 162 |
| BlsI | GCNGC | 5 cut(s) | 7, 16, 58, 61, 163 |
| Bme1390I | CCNGG | 1 cut(s) | 691 |
| Bme18I | GGWCC | 1 cut(s) | 469 |
| BmeT110I | CYCGRG | 1 cut(s) | 893 |
| BmgT120I | GGNCC | 2 cut(s) | 133, 469 |
| BmrFI | CCNGG | 1 cut(s) | 691 |
| BmsI | GCATC | 5 cut(s) | 608, 676, 781, 1249, 1271 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1121 |
| BpuMI | CCSGG | 1 cut(s) | 691 |
| BsaAI | YACGTR | 1 cut(s) | 1164 |
| BsaJI | CCNNGG | 4 cut(s) | 51, 894, 1180, 1269 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 130 |
| Bse1I | ACTGG | 1 cut(s) | 867 |
| BseDI | CCNNGG | 4 cut(s) | 51, 894, 1180, 1269 |
| BseGI | GGATG | 4 cut(s) | 109, 556, 623, 871 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 130 |
| BseMII | CTCAG | 3 cut(s) | 42, 48, 297 |
| BseNI | ACTGG | 1 cut(s) | 867 |
| BseRI | GAGGAG | 1 cut(s) | 582 |
| BseXI | GCAGC | 5 cut(s) | 17, 26, 68, 71, 173 |
| BsgI | GTGCAG | 1 cut(s) | 1000 |
| Bsh1236I | CGCG | 1 cut(s) | 143 |
| BshFI | GGCC | 3 cut(s) | 50, 135, 870 |
| BsiHKCI | CYCGRG | 1 cut(s) | 893 |
| BsiSI | CCGG | 2 cut(s) | 101, 691 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 130 |
| BsmAI | GTCTC | 1 cut(s) | 717 |
| BsnI | GGCC | 3 cut(s) | 50, 135, 870 |
| BsoBI | CYCGRG | 1 cut(s) | 893 |
| Bsp1407I | TGTACA | 1 cut(s) | 423 |
| Bsp143I | GATC | 4 cut(s) | 489, 1009, 1278, 1309 |
| BspACI | CCGC | 2 cut(s) | 1214, 1340 |
| BspANI | GGCC | 3 cut(s) | 50, 135, 870 |
| BspCNI | CTCAG | 3 cut(s) | 41, 47, 296 |
| BspFNI | CGCG | 1 cut(s) | 143 |
| BspMAI | CTGCAG | 2 cut(s) | 163, 1258 |
| BspPI | GGATC | 2 cut(s) | 1017, 1304 |
| BspTI | CTTAAG | 1 cut(s) | 176 |
| BsrGI | TGTACA | 1 cut(s) | 423 |
| BsrI | ACTGG | 1 cut(s) | 867 |
| BssECI | CCNNGG | 4 cut(s) | 51, 894, 1180, 1269 |
| BssMI | GATC | 4 cut(s) | 489, 1009, 1278, 1309 |
| Bst4CI | ACNGT | 2 cut(s) | 86, 239 |
| Bst6I | CTCTTC | 3 cut(s) | 284, 594, 1128 |
| BstAFI | CTTAAG | 1 cut(s) | 176 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 618 |
| BstAUI | TGTACA | 1 cut(s) | 423 |
| BstBAI | YACGTR | 1 cut(s) | 1164 |
| BstC8I | GCNNGC | 3 cut(s) | 98, 199, 203 |
| BstDEI | CTNAG | 4 cut(s) | 28, 34, 283, 1121 |
| BstDSI | CCRYGG | 1 cut(s) | 1269 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 128 |
| BstF5I | GGATG | 4 cut(s) | 109, 556, 623, 871 |
| BstFNI | CGCG | 1 cut(s) | 143 |
| BstHHI | GCGC | 1 cut(s) | 143 |
| BstKTI | GATC | 4 cut(s) | 492, 1012, 1281, 1312 |
| BstMAI | GTCTC | 1 cut(s) | 717 |
| BstMBI | GATC | 4 cut(s) | 489, 1009, 1278, 1309 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 14, 56, 618 |
| BstNSI | RCATGY | 1 cut(s) | 1104 |
| BstSCI | CCNGG | 1 cut(s) | 689 |
| BstSFI | CTRYAG | 2 cut(s) | 159, 1254 |
| BstUI | CGCG | 1 cut(s) | 143 |
| BstV1I | GCAGC | 5 cut(s) | 17, 26, 68, 71, 173 |
| BstX2I | RGATCY | 2 cut(s) | 1009, 1309 |
| BstYI | RGATCY | 2 cut(s) | 1009, 1309 |
| BsuI | GTATCC | 1 cut(s) | 687 |
| BsuRI | GGCC | 3 cut(s) | 50, 135, 870 |
| BtgI | CCRYGG | 1 cut(s) | 1269 |
| BtsCI | GGATG | 4 cut(s) | 109, 556, 623, 871 |
| BtsI | GCAGTG | 1 cut(s) | 156 |
| BtsIMutI | CAGTG | 3 cut(s) | 91, 156, 269 |
| Cac8I | GCNNGC | 3 cut(s) | 98, 199, 203 |
| CfoI | GCGC | 1 cut(s) | 143 |
| Cfr13I | GGNCC | 2 cut(s) | 133, 469 |
| CseI | GACGC | 1 cut(s) | 275 |
| Csp6I | GTAC | 4 cut(s) | 90, 120, 424, 1165 |
| CviAII | CATG | 3 cut(s) | 622, 1005, 1101 |
| CviQI | GTAC | 4 cut(s) | 90, 120, 424, 1165 |
| DdeI | CTNAG | 4 cut(s) | 28, 34, 283, 1121 |
| DpnI | GATC | 4 cut(s) | 491, 1011, 1280, 1311 |
| DpnII | GATC | 4 cut(s) | 489, 1009, 1278, 1309 |
| Eam1104I | CTCTTC | 3 cut(s) | 284, 594, 1128 |
| EarI | CTCTTC | 3 cut(s) | 284, 594, 1128 |
| Eco47I | GGWCC | 1 cut(s) | 469 |
| Eco88I | CYCGRG | 1 cut(s) | 893 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 128 |
| EcoO109I | RGGNCCY | 1 cut(s) | 133 |
| EcoT22I | ATGCAT | 4 cut(s) | 623, 819, 1006, 1264 |
| FaeI | CATG | 3 cut(s) | 625, 1008, 1104 |
| FatI | CATG | 3 cut(s) | 621, 1004, 1100 |
| Fnu4HI | GCNGC | 5 cut(s) | 6, 15, 57, 60, 162 |
| FokI | GGATG | 4 cut(s) | 116, 563, 630, 878 |
| Fsp4HI | GCNGC | 5 cut(s) | 6, 15, 57, 60, 162 |
| FspBI | CTAG | 2 cut(s) | 125, 257 |
| GlaI | GCGC | 1 cut(s) | 142 |
| GluI | GCNGC | 5 cut(s) | 6, 15, 57, 60, 162 |
| HaeIII | GGCC | 3 cut(s) | 50, 135, 870 |
| HapII | CCGG | 2 cut(s) | 101, 691 |
| HgaI | GACGC | 1 cut(s) | 275 |
| HhaI | GCGC | 1 cut(s) | 143 |
| Hin1II | CATG | 3 cut(s) | 625, 1008, 1104 |
| Hin6I | GCGC | 1 cut(s) | 141 |
| HinP1I | GCGC | 1 cut(s) | 141 |
| HincII | GTYRAC | 1 cut(s) | 830 |
| HindII | GTYRAC | 1 cut(s) | 830 |
| HindIII | AAGCTT | 1 cut(s) | 668 |
| HinfI | GANTC | 4 cut(s) | 26, 32, 337, 502 |
| HpaII | CCGG | 2 cut(s) | 101, 691 |
| HphI | GGTGA | 2 cut(s) | 409, 1228 |
| Hpy166II | GTNNAC | 4 cut(s) | 404, 424, 426, 830 |
| Hpy188I | TCNGA | 5 cut(s) | 31, 37, 286, 1020, 1181 |
| Hpy188III | TCNNGA | 4 cut(s) | 319, 704, 893, 1229 |
| Hpy8I | GTNNAC | 4 cut(s) | 404, 424, 426, 830 |
| Hpy99I | CGWCG | 1 cut(s) | 269 |
| HpyAV | CCTTC | 1 cut(s) | 185 |
| HpyCH4III | ACNGT | 2 cut(s) | 86, 239 |
| HpyCH4IV | ACGT | 2 cut(s) | 848, 1163 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 14, 56, 618 |
| HpyF3I | CTNAG | 4 cut(s) | 28, 34, 283, 1121 |
| HpySE526I | ACGT | 2 cut(s) | 848, 1163 |
| Hsp92II | CATG | 3 cut(s) | 625, 1008, 1104 |
| HspAI | GCGC | 1 cut(s) | 141 |
| Kzo9I | GATC | 4 cut(s) | 489, 1009, 1278, 1309 |
| LmnI | GCTCC | 1 cut(s) | 483 |
| Lsp1109I | GCAGC | 5 cut(s) | 17, 26, 68, 71, 173 |
| LweI | GCATC | 5 cut(s) | 608, 676, 781, 1249, 1271 |
| MaeI | CTAG | 2 cut(s) | 125, 257 |
| MaeII | ACGT | 2 cut(s) | 848, 1163 |
| MaeIII | GTNAC | 3 cut(s) | 109, 149, 949 |
| MalI | GATC | 4 cut(s) | 491, 1011, 1280, 1311 |
| MboI | GATC | 4 cut(s) | 489, 1009, 1278, 1309 |
| MboII | GAAGA | 4 cut(s) | 193, 271, 611, 1145 |
| MfeI | CAATTG | 1 cut(s) | 170 |
| MflI | RGATCY | 2 cut(s) | 1009, 1309 |
| MluCI | AATT | 8 cut(s) | 170, 353, 538, 723, 887, 905, 1173, 1285 |
| MlyI | GAGTC | 2 cut(s) | 20, 26 |
| MmeI | TCCRAC | 3 cut(s) | 60, 891, 915 |
| Mph1103I | ATGCAT | 4 cut(s) | 623, 819, 1006, 1264 |
| MroXI | GAANNNNTTC | 1 cut(s) | 278 |
| MseI | TTAA | 6 cut(s) | 177, 432, 627, 672, 942, 1284 |
| MspCI | CTTAAG | 1 cut(s) | 176 |
| MspI | CCGG | 2 cut(s) | 101, 691 |
| MspR9I | CCNGG | 1 cut(s) | 691 |
| MunI | CAATTG | 1 cut(s) | 170 |
| MvnI | CGCG | 1 cut(s) | 143 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 14, 56, 618 |
| NciI | CCSGG | 1 cut(s) | 691 |
| NdeII | GATC | 4 cut(s) | 489, 1009, 1278, 1309 |
| NlaIII | CATG | 3 cut(s) | 625, 1008, 1104 |
| NmeAIII | GCCGAG | 1 cut(s) | 76 |
| NsiI | ATGCAT | 4 cut(s) | 623, 819, 1006, 1264 |
| NspI | RCATGY | 1 cut(s) | 1104 |
| PciI | ACATGT | 1 cut(s) | 1100 |
| PdmI | GAANNNNTTC | 1 cut(s) | 278 |
| PfeI | GAWTC | 2 cut(s) | 337, 502 |
| PkrI | GCNGC | 5 cut(s) | 7, 16, 58, 61, 163 |
| PleI | GAGTC | 2 cut(s) | 20, 26 |
| PpsI | GAGTC | 2 cut(s) | 20, 26 |
| Ppu21I | YACGTR | 1 cut(s) | 1164 |
| PscI | ACATGT | 1 cut(s) | 1100 |
| PsiI | TTATAA | 2 cut(s) | 222, 747 |
| PspPI | GGNCC | 2 cut(s) | 133, 469 |
| PstI | CTGCAG | 2 cut(s) | 163, 1258 |
| PsuI | RGATCY | 2 cut(s) | 1009, 1309 |
| RsaI | GTAC | 4 cut(s) | 91, 121, 425, 1166 |
| RsaNI | GTAC | 4 cut(s) | 90, 120, 424, 1165 |
| SaqAI | TTAA | 6 cut(s) | 177, 432, 627, 672, 942, 1284 |
| SatI | GCNGC | 5 cut(s) | 6, 15, 57, 60, 162 |
| Sau3AI | GATC | 4 cut(s) | 489, 1009, 1278, 1309 |
| Sau96I | GGNCC | 2 cut(s) | 133, 469 |
| SchI | GAGTC | 2 cut(s) | 20, 26 |
| ScrFI | CCNGG | 1 cut(s) | 691 |
| SfaNI | GCATC | 5 cut(s) | 608, 676, 781, 1249, 1271 |
| SfcI | CTRYAG | 2 cut(s) | 159, 1254 |
| SinI | GGWCC | 1 cut(s) | 469 |
| SmlI | CTYRAG | 1 cut(s) | 176 |
| SmoI | CTYRAG | 1 cut(s) | 176 |
| Sse9I | AATT | 8 cut(s) | 170, 353, 538, 723, 887, 905, 1173, 1285 |
| SsiI | CCGC | 2 cut(s) | 1214, 1340 |
| SspI | AATATT | 3 cut(s) | 856, 946, 961 |
| SspMI | CTAG | 2 cut(s) | 125, 257 |
| StyD4I | CCNGG | 1 cut(s) | 689 |
| TaaI | ACNGT | 2 cut(s) | 86, 239 |
| TaiI | ACGT | 2 cut(s) | 851, 1166 |
| TaqI | TCGA | 3 cut(s) | 234, 492, 516 |
| TasI | AATT | 8 cut(s) | 170, 353, 538, 723, 887, 905, 1173, 1285 |
| TatI | WGTACW | 1 cut(s) | 423 |
| TfiI | GAWTC | 2 cut(s) | 337, 502 |
| Tru1I | TTAA | 6 cut(s) | 177, 432, 627, 672, 942, 1284 |
| Tru9I | TTAA | 6 cut(s) | 177, 432, 627, 672, 942, 1284 |
| TscAI | CASTG | 3 cut(s) | 91, 163, 276 |
| TseI | GCWGC | 5 cut(s) | 5, 14, 56, 59, 161 |
| TspDTI | ATGAA | 2 cut(s) | 405, 1317 |
| TspGWI | ACGGA | 2 cut(s) | 357, 1286 |
| TspRI | CASTG | 3 cut(s) | 91, 163, 276 |
| Vha464I | CTTAAG | 1 cut(s) | 176 |
| VpaK11BI | GGWCC | 1 cut(s) | 469 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 128 |
| XceI | RCATGY | 1 cut(s) | 1104 |
| XmnI | GAANNNNTTC | 1 cut(s) | 278 |
| XspI | CTAG | 2 cut(s) | 125, 257 |
| Zsp2I | ATGCAT | 4 cut(s) | 623, 819, 1006, 1264 |