AT1G60710

aldo-keto reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000435
Physical Location & Seq
Reverse (-)
22354698 .. 22356875
2178 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G60710.1

Sequence Viewer

Length: 1038 bp
ATGGCGGAAGCTTGCGGAGTGAGAAGGATGAAGCTGGGAAGCCAAGGCCTTGAGGTATCTGCGCAAGGCCTTGGTTGCATGGGCCTCTCCGCTTTCTACGGTGCTCCCAAGCCGGAAAATGAAGCCATCGCTCTCATCCACCACGCTATTCACTCCGGCGTTACTCTCCTTGACACCTCCGATATCTACGGCCCTGAGACCAATGAAGTTCTCCTCGGAAAGGCTCTCAAGGATGGGGTGAGAGAAAAAGTGGAACTTGCGACCAAATTTGGAATCAGTTATGCAGAGGGGAAAAGAGAGGTCAGAGGAGATCCTGAATATGTAAGGGCTGCTTGTGAGGCAAGTTTAAAGAGGCTAGATATTGCCTGCATCGATCTCTATTATCAGCATCGTGTCGATACTCGTGTCCCTATCGAAATCACTATGGGAGAACTGAAGAAGCTGGTTGAAGAGGGTAAAATAAAGTACATTGGTTTGTCTGAAGCCTCTGCCTCAACTATCAGAAGAGCACATGCTGTTCACCCAATTACTGCCGTGCAGATAGAATGGTCCTTGTGGACGAGAGATGTGGAAGAAGAAATCATTCCGACCTGCAGGGAACTTGGGATTGGGATTGTTGCTTACAGTCCTCTAGGACGAGGTTTCTTCGCATCTGGACCCAAGCTTGTTGAGAACCTAGAAAAGGATGACTTCAGAAAGGCTCTACCAAGATTCCAAGAGGAAAACTTAGACCACAACAAGATTGTTTATGAAAAAGTTTGTGCAATATCGGAGAAGAAAGGGTGCACTCCTGGACAACTAGCCCTGGCATGGGTTCATCACCAGGGAGATGACGTTTGCCCTATCCCAGGAACCACTAAGATCGAGAACCTCAAACAGAACATTGGAGCTTTGTCAGTGAAACTCACTCCTGAAGAGATGACTGAGCTTGAGGCCATTGCCCAACCAGGTTTTGTGAAAGGAGATAGATACAGTAACATGATACCAACTTTCAAGAACGCTGAGACACCACCATTGTCTGCTTGGAAAGCCGCTTAA

Protein Analysis

345

Amino Acids

37.92

Weight (kDa)

5.92

Isoelectric Point (pI)

33.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 26 - 314 7e-70 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000435)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10810 AT1G10810 AT1G60680 AT1G60690 AT1G60710 AT1G60730 AT1G60730 AT1G60750
fragaria_vesca FvH4_4g12490
malus_domestica MD04G1026100.v1.1 MD09G1032900.v1.1 MD13G1279900.v1.1
prunus_persica Prupe.1G175500_v2.0.a1 Prupe.1G175600_v2.0.a1 Prupe.1G175700_v2.0.a1 Prupe.1G175800_v2.0.a1 Prupe.2G050800_v2.0.a1
pyrus_communis pycom04g02210 pycom04g02230 pycom111g02620 pycom13g29370
rosa_chinensis RchiOBHm_Chr4g0409691 RchiOBHm_Chr4g0410671 RchiOBHm_Chr4g0410821 RchiOBHm_Chr4g0411011 RchiOBHm_Chr4g0411051 RchiOBHm_Chr4g0411101 RchiOBHm_Chr4g0411151 RchiOBHm_Chr4g0411171 RchiOBHm_Chr4g0411201
rosa_laevigata RLG00000008369 RLG00000008372 RLG00000008374 RLG00000008376 RLG00000008378 RLG00000008381 RLG00000008383 RLG00000008395
rosa_multiflora Rmu_co8497103.1_g000001 Rmu_co8514481.1_g000001 Rmu_sc0000543.1_g000005 Rmu_sc0000543.1_g000006 Rmu_sc0000543.1_g000024 Rmu_sc0000944.1_g000002 Rmu_sc0000944.1_g000011 Rmu_sc0001244.1_g000006 Rmu_sc0001244.1_g000014 Rmu_sc0001244.1_g000017 Rmu_sc0001244.1_g000020 Rmu_sc0003150.1_g000001 Rmu_sc0007879.1_g000001 Rmu_sc0007879.1_g000007 Rmu_sc0009499.1_g000008 Rmu_sc0029727.1_g000001
rosa_roxburghii Rroxscaffold_5G00354230 Rroxscaffold_5G00355560 Rroxscaffold_5G00355580 Rroxscaffold_5G00355600 Rroxscaffold_5G00355650 Rroxscaffold_5G00355710 Rroxscaffold_5G00355730 Rroxscaffold_5G00355760 Rroxscaffold_5G00355800 Rroxscaffold_5G00355840 Rroxscaffold_5G00355850
rosa_rugosa Rorug04G0096400 Rorug04G0105400 Rorug04G0110600 Rorug04G0110700 Rorug05G0412600 Rorug07G0180500
rosa_samantha Rh4AG157500 Rh4BG162500 Rh4BG163400 Rh4CG175300 Rh4CG176100 Rh4CG177100 Rh4CG177200 Rh4CG177400 Rh4CG177500 Rh4CG178000 Rh4CG178100 Rh4CG178300 Rh4DG159900 Rh4DG160200
rosa_wichuraiana Rw4G013600 Rw4G013610 Rw4G013660 Rw4G013690 Rw4G013700 Rw4G013710 Rw4G013720 Rw4G013730 Rw4G013740 Rw4G013750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 63
Acc36I ACCTGC 1 cut(s) 599
AciI CCGC 4 cut(s) 5, 15, 90, 1032
AclWI GGATC 1 cut(s) 305
AcsI RAATTY 1 cut(s) 266
AcuI CTGAAG 4 cut(s) 455, 501, 676, 933
AfaI GTAC 1 cut(s) 467
AfiI CCNNNNNNNGG 5 cut(s) 220, 682, 810, 811, 848
AgsI TTSAA 2 cut(s) 449, 994
AjnI CCWGG 5 cut(s) 790, 804, 822, 847, 946
AjuI GAANNNNNNNTTGG 2 cut(s) 591, 623
AluBI AGCT 6 cut(s) 11, 34, 442, 664, 890, 928
AluI AGCT 6 cut(s) 11, 34, 442, 664, 890, 928
Alw21I GWGCWC 3 cut(s) 106, 511, 788
Alw26I GTCTC 2 cut(s) 191, 998
Alw44I GTGCAC 1 cut(s) 784
AlwI GGATC 1 cut(s) 305
AoxI GGCC 5 cut(s) 46, 67, 82, 190, 933
ApaLI GTGCAC 1 cut(s) 784
ApeKI GCWGC 1 cut(s) 329
ApoI RAATTY 1 cut(s) 266
Asp700I GAANNNNTTC 1 cut(s) 582
AspLEI GCGC 1 cut(s) 64
AspS9I GGNCC 4 cut(s) 82, 191, 549, 656
AsuHPI GGTGA 3 cut(s) 250, 512, 812
AvaII GGWCC 2 cut(s) 549, 656
BaeGI GKGCMC 1 cut(s) 788
BaeI ACNNNNGTAYC 2 cut(s) 390, 423
BauI CACGAG 1 cut(s) 402
Bbv12I GWGCWC 3 cut(s) 106, 511, 788
BbvI GCAGC 1 cut(s) 316
BccI CCATC 2 cut(s) 134, 227
BceAI ACGGC 2 cut(s) 205, 518
BciT130I CCWGG 5 cut(s) 792, 806, 824, 849, 948
BcoDI GTCTC 2 cut(s) 191, 998
BfaI CTAG 4 cut(s) 356, 632, 677, 800
BfmI CTRYAG 1 cut(s) 592
BfuAI ACCTGC 1 cut(s) 599
BisI GCNGC 2 cut(s) 330, 1032
BlsI GCNGC 2 cut(s) 331, 1033
Bme1390I CCNGG 5 cut(s) 792, 806, 824, 849, 948
Bme18I GGWCC 2 cut(s) 549, 656
BmgT120I GGNCC 4 cut(s) 82, 191, 549, 656
BmiI GGNNCC 2 cut(s) 658, 853
BmrFI CCNGG 5 cut(s) 792, 806, 824, 849, 948
BmsI GCATC 3 cut(s) 378, 397, 659
BpuEI CTTGAG 3 cut(s) 71, 212, 950
Bsa29I ATCGAT 1 cut(s) 372
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 6 cut(s) 43, 70, 214, 804, 823, 847
BsaXI ACNNNNNCTCC 2 cut(s) 819, 849
Bsc4I CCNNNNNNNGG 5 cut(s) 220, 682, 810, 811, 848
Bse3DI GCAATG 1 cut(s) 936
BseBI CCWGG 5 cut(s) 792, 806, 824, 849, 948
BseCI ATCGAT 1 cut(s) 372
BseDI CCNNGG 6 cut(s) 43, 70, 214, 804, 823, 847
BseGI GGATG 4 cut(s) 33, 135, 238, 691
BseLI CCNNNNNNNGG 5 cut(s) 220, 682, 810, 811, 848
BseMI GCAATG 1 cut(s) 936
BseMII CTCAG 3 cut(s) 186, 915, 993
BseRI GAGGAG 2 cut(s) 203, 321
BseSI GKGCMC 1 cut(s) 788
BseXI GCAGC 1 cut(s) 316
BseYI CCCAGC 1 cut(s) 34
BsgI GTGCAG 1 cut(s) 557
BshFI GGCC 5 cut(s) 48, 69, 84, 192, 935
BshVI ATCGAT 1 cut(s) 372
BsiHKAI GWGCWC 3 cut(s) 106, 511, 788
BsiSI CCGG 2 cut(s) 113, 156
BslFI GGGAC 1 cut(s) 392
BslI CCNNNNNNNGG 5 cut(s) 220, 682, 810, 811, 848
BsmAI GTCTC 2 cut(s) 191, 998
BsmFI GGGAC 1 cut(s) 392
BsnI GGCC 5 cut(s) 48, 69, 84, 192, 935
Bso31I GGTCTC 1 cut(s) 191
Bsp1286I GDGCHC 3 cut(s) 106, 511, 788
Bsp143I GATC 3 cut(s) 310, 373, 861
BspACI CCGC 4 cut(s) 5, 15, 90, 1032
BspANI GGCC 5 cut(s) 48, 69, 84, 192, 935
BspCNI CTCAG 3 cut(s) 187, 916, 994
BspDI ATCGAT 1 cut(s) 372
BspLI GGNNCC 2 cut(s) 658, 853
BspMAI CTGCAG 1 cut(s) 596
BspMI ACCTGC 1 cut(s) 599
BspPI GGATC 1 cut(s) 305
BspQI GCTCTTC 1 cut(s) 499
BspTNI GGTCTC 1 cut(s) 191
BsrDI GCAATG 1 cut(s) 936
BssECI CCNNGG 6 cut(s) 43, 70, 214, 804, 823, 847
BssMI GATC 3 cut(s) 310, 373, 861
BssSI CACGAG 1 cut(s) 402
BssT1I CCWWGG 2 cut(s) 43, 70
Bst2BI CACGAG 1 cut(s) 402
Bst2UI CCWGG 5 cut(s) 792, 806, 824, 849, 948
Bst4CI ACNGT 3 cut(s) 101, 626, 974
Bst6I CTCTTC 3 cut(s) 444, 499, 909
BstC8I GCNNGC 2 cut(s) 13, 367
BstDEI CTNAG 5 cut(s) 195, 727, 858, 924, 1002
BstENI CCTNNNNNAGG 3 cut(s) 218, 680, 846
BstF5I GGATG 4 cut(s) 33, 135, 238, 691
BstHHI GCGC 1 cut(s) 64
BstKTI GATC 3 cut(s) 313, 376, 864
BstMAI GTCTC 2 cut(s) 191, 998
BstMBI GATC 3 cut(s) 310, 373, 861
BstMWI GCNNNNNNNGC 3 cut(s) 75, 338, 1028
BstNI CCWGG 5 cut(s) 792, 806, 824, 849, 948
BstNSI RCATGY 1 cut(s) 515
BstSCI CCNGG 5 cut(s) 790, 804, 822, 847, 946
BstSFI CTRYAG 1 cut(s) 592
BstSLI GKGCMC 1 cut(s) 788
BstV1I GCAGC 1 cut(s) 316
BstX2I RGATCY 1 cut(s) 310
BstYI RGATCY 1 cut(s) 310
Bsu15I ATCGAT 1 cut(s) 372
BsuRI GGCC 5 cut(s) 48, 69, 84, 192, 935
BsuTUI ATCGAT 1 cut(s) 372
BtgZI GCGATG 1 cut(s) 112
BtsCI GGATG 4 cut(s) 33, 135, 238, 691
BtsIMutI CAGTG 1 cut(s) 903
BveI ACCTGC 1 cut(s) 599
Cac8I GCNNGC 2 cut(s) 13, 367
CfoI GCGC 1 cut(s) 64
Cfr13I GGNCC 4 cut(s) 82, 191, 549, 656
ClaI ATCGAT 1 cut(s) 372
CsiI ACCWGGT 1 cut(s) 946
Csp6I GTAC 1 cut(s) 466
CviAII CATG 4 cut(s) 79, 512, 810, 979
CviQI GTAC 1 cut(s) 466
DdeI CTNAG 5 cut(s) 195, 727, 858, 924, 1002
DpnI GATC 3 cut(s) 312, 375, 863
DpnII GATC 3 cut(s) 310, 373, 861
DraI TTTAAA 1 cut(s) 348
Eam1104I CTCTTC 3 cut(s) 444, 499, 909
EarI CTCTTC 3 cut(s) 444, 499, 909
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 2 cut(s) 43, 70
Eco147I AGGCCT 2 cut(s) 48, 69
Eco31I GGTCTC 1 cut(s) 191
Eco32I GATATC 1 cut(s) 184
Eco47I GGWCC 2 cut(s) 549, 656
Eco57I CTGAAG 4 cut(s) 455, 501, 676, 933
EcoNI CCTNNNNNAGG 3 cut(s) 218, 680, 846
EcoRII CCWGG 5 cut(s) 790, 804, 822, 847, 946
EcoRV GATATC 1 cut(s) 184
EcoT14I CCWWGG 2 cut(s) 43, 70
ErhI CCWWGG 2 cut(s) 43, 70
FaeI CATG 4 cut(s) 82, 515, 813, 982
FaiI YATR 8 cut(s) 80, 282, 321, 425, 513, 750, 811, 980
FalI AAGNNNNNCTT 6 cut(s) 240, 272, 316, 348, 674, 706
FaqI GGGAC 1 cut(s) 392
FatI CATG 4 cut(s) 78, 511, 809, 978
Fnu4HI GCNGC 2 cut(s) 330, 1032
FokI GGATG 4 cut(s) 40, 122, 245, 698
Fsp4HI GCNGC 2 cut(s) 330, 1032
FspBI CTAG 4 cut(s) 356, 632, 677, 800
FspI TGCGCA 1 cut(s) 63
GlaI GCGC 1 cut(s) 63
GluI GCNGC 2 cut(s) 330, 1032
GsaI CCCAGC 1 cut(s) 38
HaeIII GGCC 5 cut(s) 48, 69, 84, 192, 935
HapII CCGG 2 cut(s) 113, 156
HhaI GCGC 1 cut(s) 64
Hin1II CATG 4 cut(s) 82, 515, 813, 982
Hin6I GCGC 1 cut(s) 62
HinP1I GCGC 1 cut(s) 62
HindIII AAGCTT 2 cut(s) 9, 662
HinfI GANTC 2 cut(s) 273, 711
HpaII CCGG 2 cut(s) 113, 156
HphI GGTGA 3 cut(s) 250, 512, 812
Hpy166II GTNNAC 3 cut(s) 520, 558, 786
Hpy188I TCNGA 8 cut(s) 181, 218, 305, 481, 503, 588, 695, 772
Hpy188III TCNNGA 5 cut(s) 314, 654, 865, 911, 994
Hpy8I GTNNAC 3 cut(s) 520, 558, 786
HpyAV CCTTC 1 cut(s) 18
HpyCH4III ACNGT 3 cut(s) 101, 626, 974
HpyCH4IV ACGT 1 cut(s) 834
HpyCH4V TGCA 7 cut(s) 78, 284, 369, 538, 594, 764, 786
HpyF10VI GCNNNNNNNGC 3 cut(s) 75, 338, 1028
HpyF3I CTNAG 5 cut(s) 195, 727, 858, 924, 1002
HpySE526I ACGT 1 cut(s) 834
Hsp92II CATG 4 cut(s) 82, 515, 813, 982
HspAI GCGC 1 cut(s) 62
Kzo9I GATC 3 cut(s) 310, 373, 861
LguI GCTCTTC 1 cut(s) 499
LmnI GCTCC 2 cut(s) 109, 887
Lsp1109I GCAGC 1 cut(s) 316
LweI GCATC 3 cut(s) 378, 397, 659
MabI ACCWGGT 1 cut(s) 946
MaeI CTAG 4 cut(s) 356, 632, 677, 800
MaeII ACGT 1 cut(s) 834
MaeIII GTNAC 2 cut(s) 160, 974
MalI GATC 3 cut(s) 312, 375, 863
MboI GATC 3 cut(s) 310, 373, 861
MboII GAAGA 8 cut(s) 448, 461, 516, 584, 587, 637, 787, 926
MflI RGATCY 1 cut(s) 310
MhlI GDGCHC 3 cut(s) 106, 511, 788
MluCI AATT 2 cut(s) 266, 525
MmeI TCCRAC 1 cut(s) 611
MroXI GAANNNNTTC 1 cut(s) 582
MseI TTAA 2 cut(s) 347, 1036
MspI CCGG 2 cut(s) 113, 156
MspR9I CCNGG 5 cut(s) 792, 806, 824, 849, 948
MvaI CCWGG 5 cut(s) 792, 806, 824, 849, 948
MwoI GCNNNNNNNGC 3 cut(s) 75, 338, 1028
NdeII GATC 3 cut(s) 310, 373, 861
NlaIII CATG 4 cut(s) 82, 515, 813, 982
NlaIV GGNNCC 2 cut(s) 658, 853
NsbI TGCGCA 1 cut(s) 63
NspI RCATGY 1 cut(s) 515
PceI AGGCCT 2 cut(s) 48, 69
PciSI GCTCTTC 1 cut(s) 499
PdmI GAANNNNTTC 1 cut(s) 582
PfeI GAWTC 2 cut(s) 273, 711
PfoI TCCNGGA 1 cut(s) 790
PkrI GCNGC 2 cut(s) 331, 1033
Psp6I CCWGG 5 cut(s) 790, 804, 822, 847, 946
PspFI CCCAGC 1 cut(s) 34
PspGI CCWGG 5 cut(s) 790, 804, 822, 847, 946
PspN4I GGNNCC 2 cut(s) 658, 853
PspPI GGNCC 4 cut(s) 82, 191, 549, 656
PstI CTGCAG 1 cut(s) 596
PsuI RGATCY 1 cut(s) 310
RsaI GTAC 1 cut(s) 467
RsaNI GTAC 1 cut(s) 466
SapI GCTCTTC 1 cut(s) 499
SaqAI TTAA 2 cut(s) 347, 1036
SatI GCNGC 2 cut(s) 330, 1032
Sau3AI GATC 3 cut(s) 310, 373, 861
Sau96I GGNCC 4 cut(s) 82, 191, 549, 656
SbfI CCTGCAGG 1 cut(s) 596
ScrFI CCNGG 5 cut(s) 792, 806, 824, 849, 948
SdaI CCTGCAGG 1 cut(s) 596
SduI GDGCHC 3 cut(s) 106, 511, 788
SexAI ACCWGGT 1 cut(s) 946
SfaNI GCATC 3 cut(s) 378, 397, 659
SfcI CTRYAG 1 cut(s) 592
SinI GGWCC 2 cut(s) 549, 656
SmlI CTYRAG 3 cut(s) 50, 227, 929
SmoI CTYRAG 3 cut(s) 50, 227, 929
Sse8387I CCTGCAGG 1 cut(s) 596
Sse9I AATT 2 cut(s) 266, 525
SseBI AGGCCT 2 cut(s) 48, 69
SsiI CCGC 4 cut(s) 5, 15, 90, 1032
SspMI CTAG 4 cut(s) 356, 632, 677, 800
StuI AGGCCT 2 cut(s) 48, 69
StyD4I CCNGG 5 cut(s) 790, 804, 822, 847, 946
StyI CCWWGG 2 cut(s) 43, 70
TaaI ACNGT 3 cut(s) 101, 626, 974
TaiI ACGT 1 cut(s) 837
TaqI TCGA 4 cut(s) 372, 396, 414, 864
TasI AATT 2 cut(s) 266, 525
TatI WGTACW 1 cut(s) 465
TauI GCSGC 1 cut(s) 1034
TfiI GAWTC 2 cut(s) 273, 711
Tru1I TTAA 2 cut(s) 347, 1036
Tru9I TTAA 2 cut(s) 347, 1036
TscAI CASTG 1 cut(s) 903
TseI GCWGC 1 cut(s) 329
TspDTI ATGAA 5 cut(s) 44, 135, 219, 765, 806
TspRI CASTG 1 cut(s) 903
VneI GTGCAC 1 cut(s) 784
VpaK11BI GGWCC 2 cut(s) 549, 656
XagI CCTNNNNNAGG 3 cut(s) 218, 680, 846
XapI RAATTY 1 cut(s) 266
XceI RCATGY 1 cut(s) 515
XcmI CCANNNNNNNNNTGG 1 cut(s) 1020
XmnI GAANNNNTTC 1 cut(s) 582
XspI CTAG 4 cut(s) 356, 632, 677, 800
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.