Rorug04G0096400

reductase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
15137438 .. 15142194
4757 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0096400.1

Sequence Viewer

Length: 3177 bp
ATGCGCTCAGGAGGTTGTGCGGTGCAGCAGACCCTCACAGCGGAGGCTGCTTCGGTTCTGAAGCACTCTCTCAGCTTAGCCAGGCGGAGAGGCCATGCTCAGGTCACTCCTCTCCACGTGGCCGCCACTCTCCTCGCCTCAAGAACCAGTCTCTTGAGGCGGGCCTGTCTCAAAGCTGCCGCAGCAGCCAACCACAACCCGCCACATCACCACCCTCTCCAATGCAGGGCCCTGGAGCTCTGCTTCAATGTGGCGCTTAACAGGCTCCCCACTACACCTCCCTCCGGAGGTGGCGGCGCCCCCAGTCCTCTGCTGGTCAACCACGGTCAGCACCACCAGCAGCAACAGCCTTCTCTCTCCAATGCTCTCATTGCAGCTCTCAAAAGGGCCCAAGCCCACCAGAGAAGGGGGTGCATAGAGCAGCAGAATCAGCAGCAGCCACTTTTGACGATCAAGGTTGAGCTTGAGCAGCTGATCATCTCCATCTTGGATGACCCAAGTGTTAGCCGGGTTATGAGGGAAGCCGGGTTCTCGAGTACTTCTGTCAAGAACAACTTAGAGGACACCTCCTCTGTTTCCTCTGTTTTCCAGTGTTATAATAGCACTGGTGGGGTTTTCTCTTCTCCTTGTTCACCTACTGCTCCTGAAAACTTAACCCATCATCATATCAGTCCATCTGGAAATTTCTGGCAAACCCATTTCTTGACTTACACTTCTGAGCAAAACCCACTTCTCTTTTCCTCGCCACCAAAGAAATTACTTCTTCCATTCAATGTCAGCTCCATTAATACTCCTACAGAGTCTGTCTCTTATTCCAAGGAAGATGTTAAGTTGGTGTTTGAGGTTTTGGTGAGGAAGAACAGTAAGAAAAGGAACACTGTGATTGTGGGTGATTCTGTGTCCATTACTGAAGGCCTTGTTGCTGAGGTCATGGGGAGGTTAGAGAGAGGGTCAGAGGTTCCTGAGGAACTGAAATCAACCCATTTCATCAAATTTCAGTTTCCACATGTTTCTTTGAGGTACATGAAAAGAGAAGATGTGGAATCAAATATCACAGAGCTCAAAAGGAAATTGGATCACTCTGGAGGAGGTGGTGCTATTATTTACATTGGAGACTTGAAATGGACAATTGGTGATGAGAGAGAAGGAGGATTAGTCTCTGGTGGGTATAGCCCAGTTGAGCATTTAGTTTCAGAAATTTCAAGGTTGGTTTCAGATTATGAAAGCAGCTCATTCTCAAGCACAAAGCCAAAGGTGTGGCTAATGGCCACTGCTAGTTATCAAACATACATGAGATGCCAAATGAGGCAACCTTCTCTTGAGATTCAATGGGGTCTTCAAGCTGTTTCTGTACCATCAGGAGGTCTTGGTTTGAGTCTCCATGCTTCCAGTGTCCATGATTCGAGAGTAATCTTTTCTCAAAACCCATCTGAAGTGCTTGAAACAAAGCCATTCAGTAGCATCAAGGATCATGAACAAGATCATGGTAAGCTCCCCTGCTGTGAAGAATGCACTTCAAATTATGAGAAAGAAGCTCAGTTGCTCAAATCTGGCCAGCAGAAATTGCCTGCCTGGCTTCAACCACATGGCACCCAAGCCTGTCAAAAGGATGAAGTGGTTGAATTGAGGAGAAAGTGGAACAGGTTATGCTACAGTCTGCACCAAGGAAGGCATAATCAGAATCATTCAAGCCCCGCTTTGTACAACCATCAAAACTCAATTGGGAAGAACCACTCTTATAGTGCTTCATCGTACCCTTGGTTGTCAACCAGGAATGGCATCTTCCCAGATCTGAATTCGATCTCTTTTGCTGATCATCCAGCTTCAGACCCTGCAACCCATGGCTCTAATCTGGTGCCTCGGTTCAGGAGACAACAATCATGTAGTACAATCGAATTCAATTTCGATAATGGGGTTCAAAAGCATGAAGTAGTAGTGGAACCAACCTTGGATTCTTTGAGACTCAGTGAAGATAAGGAAGTGAAGATCACACTTGCTCTCGGCAACTCTGTGTTTTCTGATTCAGAAAAATCGATGGTGCAGAGAGCTGACATGTGTAAGCTTTTGAAAGAGAATGTGCCTTGGCAATCTGAATCCATTCCCTCAATAGTAGAAGCCATAATCGGCTCCAAACCATGTTCGGAAACTTGGTTTCTGATTGATGGGAATGACTCGATTGGAAAGAGAAGGTTGGCTCAAGCAATAGCAGAGTTGGTTCTGGGATCTGCTAATTCACTCTTACATATCAACATGAACAAAAGAGAAGATGAGATGTACCCAAGAGTGGAAAAACTAAAAAAAGCCTTGAAATCCAGTGACAAACTTGTTGTGTTGGTAGAAGATGTTGATTTGGCTGATACCCAGTTCTTAAAATTCCTAGCTGATCGAAAATGTGGAGAAGTGAGTAGAAGAGATGGGAATCGTGGCCAAGCAATATTCATTTTGACCAAGGGTGAGTCCACAAGAAATGAGTACCCAGGTTCTATAATCCAAATGAAGTTGAAAGTTGATGAAAAAAGTACTAGTCCTAGTTTTGGGATCGCCAGCTTCGAACACAAGCGAAAAGCTGAGTGGGAGCTTGAAAACAAGACCAAATCTACAAGATTTGAAGAAAAGGAGGATTCAAGTGTGGTTGTTGCCTTTGAGAATGTGAATAGCAAGAAGGACTTCTCAAGGCAATCAAGCTTCAACAGTAACCTTGATCTAAACCTCAAAGCCGGTGAGGACAATGAAATCGAAGACAATGCAGGGGAGGTTAGCCCTATTTCAAGTGATTTGACCCGCGACTCTGCCACGGATGTCCAAACCCCACTTGGGTTCCTCGAATCAGTCGAGAACCTCTTCGTTTTCAATCGAAGCCCAGCTAGAGATCGGGAGGCCACCGAGCTTTTCTTGTCCAAGATTGAAGGGTGCTTTGAGGGTGTATATGGGAAACAAAATGGGGTTAGTTTTAGTGTGGATAAGAGGGTGTTAGAAGAGATATCTGTTGGGTCTGGTTCTTTTCCCAATAGCTTGTTTGAGAAATGGCTAAAAGGTATTTTTCAAACAAGCCTAAAATTGGTTAAATTTGGCGGGAAAGAGGGTATACTTGTAAGGCTATGTTTGGGGGGTACAGAAGAAGGCATTTTGGAGGGTTTCTTGGGCTCTTGTCTTCCCAAGAAAATCCAAATTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1058

Amino Acids

117.18

Weight (kDa)

7.21

Isoelectric Point (pI)

48.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NBD_SMAX1 PF23569 272 - 464 1.2e-80 SMAX1 nucleotide binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000435)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10810 AT1G10810 AT1G60680 AT1G60690 AT1G60710 AT1G60730 AT1G60730 AT1G60750
fragaria_vesca FvH4_4g12490
malus_domestica MD04G1026100.v1.1 MD09G1032900.v1.1 MD13G1279900.v1.1
prunus_persica Prupe.1G175500_v2.0.a1 Prupe.1G175600_v2.0.a1 Prupe.1G175700_v2.0.a1 Prupe.1G175800_v2.0.a1 Prupe.2G050800_v2.0.a1
pyrus_communis pycom04g02210 pycom04g02230 pycom111g02620 pycom13g29370
rosa_chinensis RchiOBHm_Chr4g0409691 RchiOBHm_Chr4g0410671 RchiOBHm_Chr4g0410821 RchiOBHm_Chr4g0411011 RchiOBHm_Chr4g0411051 RchiOBHm_Chr4g0411101 RchiOBHm_Chr4g0411151 RchiOBHm_Chr4g0411171 RchiOBHm_Chr4g0411201
rosa_laevigata RLG00000008369 RLG00000008372 RLG00000008374 RLG00000008376 RLG00000008378 RLG00000008381 RLG00000008383 RLG00000008395
rosa_multiflora Rmu_co8497103.1_g000001 Rmu_co8514481.1_g000001 Rmu_sc0000543.1_g000005 Rmu_sc0000543.1_g000006 Rmu_sc0000543.1_g000024 Rmu_sc0000944.1_g000002 Rmu_sc0000944.1_g000011 Rmu_sc0001244.1_g000006 Rmu_sc0001244.1_g000014 Rmu_sc0001244.1_g000017 Rmu_sc0001244.1_g000020 Rmu_sc0003150.1_g000001 Rmu_sc0007879.1_g000001 Rmu_sc0007879.1_g000007 Rmu_sc0009499.1_g000008 Rmu_sc0029727.1_g000001
rosa_roxburghii Rroxscaffold_5G00354230 Rroxscaffold_5G00355560 Rroxscaffold_5G00355580 Rroxscaffold_5G00355600 Rroxscaffold_5G00355650 Rroxscaffold_5G00355710 Rroxscaffold_5G00355730 Rroxscaffold_5G00355760 Rroxscaffold_5G00355800 Rroxscaffold_5G00355840 Rroxscaffold_5G00355850
rosa_rugosa Rorug04G0096400 Rorug04G0105400 Rorug04G0110600 Rorug04G0110700 Rorug05G0412600 Rorug07G0180500
rosa_samantha Rh4AG157500 Rh4BG162500 Rh4BG163400 Rh4CG175300 Rh4CG176100 Rh4CG177100 Rh4CG177200 Rh4CG177400 Rh4CG177500 Rh4CG178000 Rh4CG178100 Rh4CG178300 Rh4DG159900 Rh4DG160200
rosa_wichuraiana Rw4G013600 Rw4G013610 Rw4G013660 Rw4G013690 Rw4G013700 Rw4G013710 Rw4G013720 Rw4G013730 Rw4G013740 Rw4G013750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 597
AccB1I GGYRCC 3 cut(s) 296, 1589, 1855
AccI GTMKAC 1 cut(s) 3085
AccII CGCG 1 cut(s) 2784
AccIII TCCGGA 1 cut(s) 284
AclWI GGATC 4 cut(s) 1083, 1476, 2230, 2546
AcoI YGGCCR 4 cut(s) 120, 1266, 1552, 2425
AcsI RAATTY 8 cut(s) 682, 992, 1197, 1795, 1895, 2372, 3065, 3168
AcuI CTGAAG 4 cut(s) 80, 930, 1452, 1809
AcvI CACGTG 1 cut(s) 118
AcyI GRCGYC 1 cut(s) 297
AflIII ACRYGT 2 cut(s) 1006, 2052
AhlI ACTAGT 1 cut(s) 2522
AjnI CCWGG 5 cut(s) 80, 231, 1571, 1769, 2476
AjuI GAANNNNNNNTTGG 2 cut(s) 1936, 1968
AloI GAACNNNNNNTCC 2 cut(s) 512, 544
Alw21I GWGCWC 2 cut(s) 240, 1062
Alw26I GTCTC 8 cut(s) 155, 173, 811, 1107, 1162, 1382, 1864, 1954
AlwI GGATC 4 cut(s) 1083, 1476, 2230, 2546
AlwNI CAGNNNCTG 2 cut(s) 803, 1832
Ama87I CYCGRG 1 cut(s) 532
Aor13HI TCCGGA 1 cut(s) 284
ApaI GGGCCC 2 cut(s) 232, 391
ApoI RAATTY 8 cut(s) 682, 992, 1197, 1795, 1895, 2372, 3065, 3168
AseI ATTAAT 1 cut(s) 786
Asp700I GAANNNNTTC 3 cut(s) 2097, 2666, 2840
AspLEI GCGC 3 cut(s) 6, 256, 299
AspS9I GGNCC 5 cut(s) 162, 228, 229, 387, 388
AsuC2I CCSGG 2 cut(s) 509, 526
AsuHPI GGTGA 7 cut(s) 200, 624, 862, 902, 1145, 2465, 2732
AsuII TTCGAA 1 cut(s) 2550
AvaI CYCGRG 1 cut(s) 532
AxyI CCTNAGG 1 cut(s) 963
BaeGI GKGCMC 2 cut(s) 232, 391
BalI TGGCCA 3 cut(s) 1268, 1554, 2427
BanI GGYRCC 3 cut(s) 296, 1589, 1855
BanII GRGCYC 5 cut(s) 232, 240, 391, 1062, 3146
BbrPI CACGTG 1 cut(s) 118
BbsI GAAGAC 3 cut(s) 1328, 2745, 3143
Bbv12I GWGCWC 2 cut(s) 240, 1062
BbvCI CCTCAGC 1 cut(s) 924
BccI CCATC 9 cut(s) 491, 666, 682, 1363, 1435, 1716, 2029, 2156, 2408
BcgI CGANNNNNNTGC 2 cut(s) 2726, 2760
BciT130I CCWGG 5 cut(s) 82, 233, 1573, 1771, 2478
BclI TGATCA 2 cut(s) 474, 1813
BcnI CCSGG 2 cut(s) 509, 526
BcoDI GTCTC 8 cut(s) 155, 173, 811, 1107, 1162, 1382, 1864, 1954
BcuI ACTAGT 1 cut(s) 2522
BfaI CTAG 5 cut(s) 1275, 2378, 2523, 2529, 2865
BfmI CTRYAG 2 cut(s) 795, 1651
BfoI RGCGCY 2 cut(s) 257, 300
BglI GCCNNNNNGGC 1 cut(s) 1573
BglII AGATCT 1 cut(s) 1789
BlpI GCTNAGC 1 cut(s) 76
BmcAI AGTACT 2 cut(s) 538, 2521
Bme1390I CCNGG 7 cut(s) 82, 233, 509, 526, 1573, 1771, 2478
BmeT110I CYCGRG 1 cut(s) 532
BmgT120I GGNCC 5 cut(s) 162, 228, 229, 387, 388
BmrFI CCNGG 7 cut(s) 82, 233, 509, 526, 1573, 1771, 2478
BmrI ACTGGG 3 cut(s) 297, 1169, 2356
BmsI GCATC 3 cut(s) 1286, 1470, 1788
BmuI ACTGGG 3 cut(s) 297, 1169, 2356
BpiI GAAGAC 3 cut(s) 1328, 2745, 3143
BplI GAGNNNNNCTC 4 cut(s) 551, 583, 791, 823
BpmI CTGGAG 2 cut(s) 254, 1104
Bpu10I CCTNAGC 3 cut(s) 7, 99, 924
Bpu1102I GCTNAGC 1 cut(s) 76
Bpu14I TTCGAA 1 cut(s) 2550
BpuEI CTTGAG 7 cut(s) 124, 175, 485, 1222, 1340, 2181, 2656
BpuMI CCSGG 2 cut(s) 509, 526
Bsa29I ATCGAT 1 cut(s) 2033
BsaAI YACGTR 1 cut(s) 118
BsaBI GATNNNNATC 1 cut(s) 2418
BsaHI GRCGYC 1 cut(s) 297
BsaWI WCCGGW 1 cut(s) 284
BsaXI ACNNNNNCTCC 4 cut(s) 262, 292, 1140, 1170
Bse118I RCCGGY 1 cut(s) 2717
Bse1I ACTGG 8 cut(s) 147, 303, 589, 610, 1175, 1389, 2313, 2362
Bse21I CCTNAGG 1 cut(s) 963
Bse3DI GCAATG 1 cut(s) 369
Bse8I GATNNNNATC 1 cut(s) 2418
BseAI TCCGGA 1 cut(s) 284
BseBI CCWGG 5 cut(s) 82, 233, 1573, 1771, 2478
BseCI ATCGAT 1 cut(s) 2033
BseGI GGATG 4 cut(s) 496, 1615, 1816, 2803
BseJI GATNNNNATC 1 cut(s) 2418
BseMI GCAATG 1 cut(s) 369
BseMII CTCAG 9 cut(s) 21, 85, 113, 708, 915, 954, 1550, 1978, 2559
BseNI ACTGG 8 cut(s) 147, 303, 589, 610, 1175, 1389, 2313, 2362
BseRI GAGGAG 5 cut(s) 99, 122, 559, 1101, 1642
BseSI GKGCMC 2 cut(s) 232, 391
BseYI CCCAGC 1 cut(s) 2860
BsgI GTGCAG 3 cut(s) 44, 1643, 2060
Bsh1236I CGCG 1 cut(s) 2784
BshNI GGYRCC 3 cut(s) 296, 1589, 1855
BshVI ATCGAT 1 cut(s) 2033
BsiHKAI GWGCWC 2 cut(s) 240, 1062
BsiHKCI CYCGRG 1 cut(s) 532
BsiSI CCGG 4 cut(s) 285, 508, 525, 2718
BsmAI GTCTC 8 cut(s) 155, 173, 811, 1107, 1162, 1382, 1864, 1954
BsmI GAATGC 1 cut(s) 1514
BsoBI CYCGRG 1 cut(s) 532
Bsp119I TTCGAA 1 cut(s) 2550
Bsp120I GGGCCC 2 cut(s) 228, 387
Bsp1286I GDGCHC 5 cut(s) 232, 240, 391, 1062, 3146
Bsp13I TCCGGA 1 cut(s) 284
Bsp1407I TGTACA 1 cut(s) 1701
Bsp1720I GCTNAGC 1 cut(s) 76
Bsp19I CCATGG 1 cut(s) 1840
BspCNI CTCAG 9 cut(s) 20, 84, 112, 709, 916, 955, 1549, 1977, 2560
BspDI ATCGAT 1 cut(s) 2033
BspEI TCCGGA 1 cut(s) 284
BspFNI CGCG 1 cut(s) 2784
BspHI TCATGA 1 cut(s) 1471
BspPI GGATC 4 cut(s) 1083, 1476, 2230, 2546
BspT104I TTCGAA 1 cut(s) 2550
BspT107I GGYRCC 3 cut(s) 296, 1589, 1855
BsrDI GCAATG 1 cut(s) 369
BsrFI RCCGGY 1 cut(s) 2717
BsrGI TGTACA 1 cut(s) 1701
BsrI ACTGG 8 cut(s) 147, 303, 589, 610, 1175, 1389, 2313, 2362
BssAI RCCGGY 1 cut(s) 2717
BssNAI GTATAC 1 cut(s) 3086
BssNI GRCGYC 1 cut(s) 297
BssT1I CCWWGG 7 cut(s) 816, 1663, 1757, 1840, 1947, 2081, 2448
Bst1107I GTATAC 1 cut(s) 3086
Bst2UI CCWGG 5 cut(s) 82, 233, 1573, 1771, 2478
Bst4CI ACNGT 5 cut(s) 326, 863, 880, 1655, 2693
Bst6I CTCTTC 4 cut(s) 625, 2404, 2846, 2970
BstACI GRCGYC 1 cut(s) 297
BstAPI GCANNNNNTGC 1 cut(s) 1564
BstAUI TGTACA 1 cut(s) 1701
BstBAI YACGTR 1 cut(s) 118
BstBI TTCGAA 1 cut(s) 2550
BstC8I GCNNGC 4 cut(s) 162, 1556, 1569, 2545
BstDSI CCRYGG 3 cut(s) 322, 1840, 2793
BstF5I GGATG 4 cut(s) 496, 1615, 1816, 2803
BstFNI CGCG 1 cut(s) 2784
BstH2I RGCGCY 2 cut(s) 257, 300
BstHHI GCGC 3 cut(s) 6, 256, 299
BstMAI GTCTC 8 cut(s) 155, 173, 811, 1107, 1162, 1382, 1864, 1954
BstNI CCWGG 5 cut(s) 82, 233, 1573, 1771, 2478
BstNSI RCATGY 2 cut(s) 1010, 2056
BstSCI CCNGG 7 cut(s) 80, 231, 507, 524, 1571, 1769, 2476
BstSFI CTRYAG 2 cut(s) 795, 1651
BstSLI GKGCMC 2 cut(s) 232, 391
BstUI CGCG 1 cut(s) 2784
BstV2I GAAGAC 3 cut(s) 1328, 2745, 3143
BstX2I RGATCY 2 cut(s) 1789, 2222
BstXI CCANNNNNNTGG 1 cut(s) 1257
BstYI RGATCY 2 cut(s) 1789, 2222
BstZ17I GTATAC 1 cut(s) 3086
Bsu15I ATCGAT 1 cut(s) 2033
Bsu36I CCTNAGG 1 cut(s) 963
BsuTUI ATCGAT 1 cut(s) 2033
BtgI CCRYGG 3 cut(s) 322, 1840, 2793
BtsCI GGATG 4 cut(s) 496, 1615, 1816, 2803
BtsI GCAGTG 1 cut(s) 1269
BtsIMutI CAGTG 7 cut(s) 596, 603, 876, 1269, 1396, 1972, 2320
Cac8I GCNNGC 4 cut(s) 162, 1556, 1569, 2545
CaiI CAGNNNCTG 2 cut(s) 803, 1832
CciI TCATGA 1 cut(s) 1471
CfoI GCGC 3 cut(s) 6, 256, 299
Cfr10I RCCGGY 1 cut(s) 2717
Cfr13I GGNCC 5 cut(s) 162, 228, 229, 387, 388
ClaI ATCGAT 1 cut(s) 2033
DinI GGCGCC 1 cut(s) 298
EaeI YGGCCR 4 cut(s) 120, 1266, 1552, 2425
Eam1104I CTCTTC 4 cut(s) 625, 2404, 2846, 2970
EarI CTCTTC 4 cut(s) 625, 2404, 2846, 2970
EciI GGCGGA 1 cut(s) 100
Ecl136II GAGCTC 2 cut(s) 238, 1060
Eco130I CCWWGG 7 cut(s) 816, 1663, 1757, 1840, 1947, 2081, 2448
Eco147I AGGCCT 1 cut(s) 915
Eco24I GRGCYC 5 cut(s) 232, 240, 391, 1062, 3146
Eco32I GATATC 1 cut(s) 2982
Eco53kI GAGCTC 2 cut(s) 238, 1060
Eco57I CTGAAG 4 cut(s) 80, 930, 1452, 1809
Eco72I CACGTG 1 cut(s) 118
Eco81I CCTNAGG 1 cut(s) 963
Eco88I CYCGRG 1 cut(s) 532
EcoICRI GAGCTC 2 cut(s) 238, 1060
EcoO109I RGGNCCY 3 cut(s) 228, 229, 387
EcoRI GAATTC 2 cut(s) 1795, 1895
EcoRII CCWGG 5 cut(s) 80, 231, 1571, 1769, 2476
EcoRV GATATC 1 cut(s) 2982
EcoT14I CCWWGG 7 cut(s) 816, 1663, 1757, 1840, 1947, 2081, 2448
EcoT38I GRGCYC 5 cut(s) 232, 240, 391, 1062, 3146
EgeI GGCGCC 1 cut(s) 298
EheI GGCGCC 1 cut(s) 298
ErhI CCWWGG 7 cut(s) 816, 1663, 1757, 1840, 1947, 2081, 2448
FalI AAGNNNNNCTT 6 cut(s) 539, 571, 1681, 1713, 2651, 2683
FauI CCCGC 5 cut(s) 153, 207, 1702, 2789, 3065
FbaI TGATCA 2 cut(s) 474, 1813
FblI GTMKAC 1 cut(s) 3085
FokI GGATG 4 cut(s) 503, 1622, 1803, 2810
FriOI GRGCYC 5 cut(s) 232, 240, 391, 1062, 3146
FspBI CTAG 5 cut(s) 1275, 2378, 2523, 2529, 2865
GlaI GCGC 3 cut(s) 5, 255, 298
GsaI CCCAGC 1 cut(s) 2864
GsuI CTGGAG 2 cut(s) 254, 1104
HaeII RGCGCY 2 cut(s) 257, 300
HapII CCGG 4 cut(s) 285, 508, 525, 2718
HhaI GCGC 3 cut(s) 6, 256, 299
Hin1I GRCGYC 1 cut(s) 297
Hin6I GCGC 3 cut(s) 4, 254, 297
HinP1I GCGC 3 cut(s) 4, 254, 297
HincII GTYRAC 2 cut(s) 319, 1767
HindII GTYRAC 2 cut(s) 319, 1767
HindIII AAGCTT 2 cut(s) 2060, 2683
HpaII CCGG 4 cut(s) 285, 508, 525, 2718
HphI GGTGA 7 cut(s) 200, 624, 862, 902, 1145, 2465, 2732
Hpy166II GTNNAC 5 cut(s) 319, 632, 1767, 2460, 3086
Hpy8I GTNNAC 5 cut(s) 319, 632, 1767, 2460, 3086
HpyCH4III ACNGT 5 cut(s) 326, 863, 880, 1655, 2693
HpyCH4IV ACGT 1 cut(s) 117
HpyCH4V TGCA 9 cut(s) 25, 225, 374, 414, 1512, 1660, 1835, 2041, 2747
HpySE526I ACGT 1 cut(s) 117
Hsp92I GRCGYC 1 cut(s) 297
HspAI GCGC 3 cut(s) 4, 254, 297
KasI GGCGCC 1 cut(s) 296
Kpn2I TCCGGA 1 cut(s) 284
Ksp22I TGATCA 2 cut(s) 474, 1813
LmnI GCTCC 7 cut(s) 235, 270, 646, 785, 1497, 2132, 2575
LweI GCATC 3 cut(s) 1286, 1470, 1788
MaeI CTAG 5 cut(s) 1275, 2378, 2523, 2529, 2865
MaeII ACGT 1 cut(s) 117
MaeIII GTNAC 3 cut(s) 103, 2315, 2693
MfeI CAATTG 2 cut(s) 1128, 1719
MflI RGATCY 2 cut(s) 1789, 2222
MhlI GDGCHC 5 cut(s) 232, 240, 391, 1062, 3146
MlsI TGGCCA 3 cut(s) 1268, 1554, 2427
MluNI TGGCCA 3 cut(s) 1268, 1554, 2427
Mly113I GGCGCC 1 cut(s) 297
MlyI GAGTC 6 cut(s) 809, 1384, 1956, 2165, 2465, 2780
Mox20I TGGCCA 3 cut(s) 1268, 1554, 2427
MroI TCCGGA 1 cut(s) 284
MroXI GAANNNNTTC 3 cut(s) 2097, 2666, 2840
MscI TGGCCA 3 cut(s) 1268, 1554, 2427
MseI TTAA 6 cut(s) 258, 653, 786, 828, 2369, 3063
Msp20I TGGCCA 3 cut(s) 1268, 1554, 2427
MspA1I CMGCKG 2 cut(s) 41, 472
MspI CCGG 4 cut(s) 285, 508, 525, 2718
MspR9I CCNGG 7 cut(s) 82, 233, 509, 526, 1573, 1771, 2478
MunI CAATTG 2 cut(s) 1128, 1719
Mva1269I GAATGC 1 cut(s) 1514
MvaI CCWGG 5 cut(s) 82, 233, 1573, 1771, 2478
MvnI CGCG 1 cut(s) 2784
NarI GGCGCC 1 cut(s) 297
NciI CCSGG 2 cut(s) 509, 526
NcoI CCATGG 1 cut(s) 1840
NmeAIII GCCGAG 1 cut(s) 1980
NmuCI GTSAC 2 cut(s) 103, 2315
NspI RCATGY 2 cut(s) 1010, 2056
NspV TTCGAA 1 cut(s) 2550
PaeR7I CTCGAG 1 cut(s) 532
PagI TCATGA 1 cut(s) 1471
PceI AGGCCT 1 cut(s) 915
PciI ACATGT 2 cut(s) 1006, 2052
PcsI WCGNNNNNNNCGW 2 cut(s) 2547, 2829
PctI GAATGC 1 cut(s) 1514
PdmI GAANNNNTTC 3 cut(s) 2097, 2666, 2840
PleI GAGTC 6 cut(s) 808, 1383, 1956, 2165, 2464, 2780
PluTI GGCGCC 1 cut(s) 300
PmaCI CACGTG 1 cut(s) 118
PmlI CACGTG 1 cut(s) 118
PpsI GAGTC 6 cut(s) 808, 1383, 1956, 2165, 2464, 2780
Ppu21I YACGTR 1 cut(s) 118
PscI ACATGT 2 cut(s) 1006, 2052
PshBI ATTAAT 1 cut(s) 786
PsiI TTATAA 1 cut(s) 597
Psp124BI GAGCTC 2 cut(s) 240, 1062
Psp6I CCWGG 5 cut(s) 80, 231, 1571, 1769, 2476
PspCI CACGTG 1 cut(s) 118
PspFI CCCAGC 1 cut(s) 2860
PspGI CCWGG 5 cut(s) 80, 231, 1571, 1769, 2476
PspOMI GGGCCC 2 cut(s) 228, 387
PspPI GGNCC 5 cut(s) 162, 228, 229, 387, 388
PstNI CAGNNNCTG 2 cut(s) 803, 1832
PsuI RGATCY 2 cut(s) 1789, 2222
PvuII CAGCTG 1 cut(s) 472
SacI GAGCTC 2 cut(s) 240, 1062
SaqAI TTAA 6 cut(s) 258, 653, 786, 828, 2369, 3063
Sau96I GGNCC 5 cut(s) 162, 228, 229, 387, 388
ScaI AGTACT 2 cut(s) 538, 2521
SchI GAGTC 6 cut(s) 809, 1384, 1956, 2165, 2465, 2780
ScrFI CCNGG 7 cut(s) 82, 233, 509, 526, 1573, 1771, 2478
SduI GDGCHC 5 cut(s) 232, 240, 391, 1062, 3146
SfaNI GCATC 3 cut(s) 1286, 1470, 1788
SfcI CTRYAG 2 cut(s) 795, 1651
SfoI GGCGCC 1 cut(s) 298
Sfr274I CTCGAG 1 cut(s) 532
SfuI TTCGAA 1 cut(s) 2550
SlaI CTCGAG 1 cut(s) 532
SmlI CTYRAG 8 cut(s) 139, 154, 464, 532, 1237, 1319, 2196, 2671
SmoI CTYRAG 8 cut(s) 139, 154, 464, 532, 1237, 1319, 2196, 2671
SpeI ACTAGT 1 cut(s) 2522
SseBI AGGCCT 1 cut(s) 915
SspDI GGCGCC 1 cut(s) 296
SspI AATATT 1 cut(s) 2436
SspMI CTAG 5 cut(s) 1275, 2378, 2523, 2529, 2865
SstI GAGCTC 2 cut(s) 240, 1062
StuI AGGCCT 1 cut(s) 915
StyD4I CCNGG 7 cut(s) 80, 231, 507, 524, 1571, 1769, 2476
StyI CCWWGG 7 cut(s) 816, 1663, 1757, 1840, 1947, 2081, 2448
TaaI ACNGT 5 cut(s) 326, 863, 880, 1655, 2693
TaiI ACGT 1 cut(s) 120
TatI WGTACW 4 cut(s) 536, 1701, 1886, 2519
TauI GCSGC 3 cut(s) 125, 182, 297
Tru1I TTAA 6 cut(s) 258, 653, 786, 828, 2369, 3063
Tru9I TTAA 6 cut(s) 258, 653, 786, 828, 2369, 3063
TscAI CASTG 7 cut(s) 596, 610, 883, 1276, 1396, 1972, 2320
TseFI GTSAC 2 cut(s) 103, 2315
Tsp45I GTSAC 2 cut(s) 103, 2315
TspGWI ACGGA 1 cut(s) 2810
TspRI CASTG 7 cut(s) 596, 610, 883, 1276, 1396, 1972, 2320
VspI ATTAAT 1 cut(s) 786
XapI RAATTY 8 cut(s) 682, 992, 1197, 1795, 1895, 2372, 3065, 3168
XceI RCATGY 2 cut(s) 1010, 2056
XcmI CCANNNNNNNNNTGG 2 cut(s) 310, 2810
XhoI CTCGAG 1 cut(s) 532
XmiI GTMKAC 1 cut(s) 3085
XmnI GAANNNNTTC 3 cut(s) 2097, 2666, 2840
XspI CTAG 5 cut(s) 1275, 2378, 2523, 2529, 2865
ZrmI AGTACT 2 cut(s) 538, 2521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.