AT1G70360

F-box protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
26508486 .. 26509325
840 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G70360.1

Sequence Viewer

Length: 582 bp
ATGAATCTCTCCGGTGTAAAAAGGTTAAGCGAGCCTCTCTTGTTGAAAAATATATTGATGGAGGAATCTGGTGACACTTGTGAATTGACGATTGTGATCATGACTGTTCATGCTGTTATGTTAGAATCTGGATTTGTGTTGTTTGATCCTGATTCATCTATGCGTTTTAGCTTCTCGAAGAAGACTTTGGTATCGCTTAACTATACTCTACCTTCTGTGAAAGGAATAGTCGGTTTGAATTTTGAGAAGGAGGCGATTGTTGGTAGTTTTGTTCGTGTGGTGTCTATTGATAAACGTAGCTATGTGCACATTGTTGATTTACTTATGGAAACTTTGAAATCTGATGAAGAAGAAGATACTTTGAGCATTGACTGTAAGGTACTCGTGTGGTGGAGAATGATAAAAGATGGTATTGTTACGCCTCTGTTGGTTGATCTTTGCTACAAAACTGGGTTAGAACTTCCACCTTGCTTTATCAGTCTACCTCGAGAGCTAAAACACAAGATACTAGAGTCGCTTCCCGGTGTGGATATTGGGACATTGGCTTGTGTTTCTTCTGAACTGCGAGACATGGCTTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

193

Amino Acids

21.54

Weight (kDa)

5.03

Isoelectric Point (pI)

32.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 481
AclWI GGATC 1 cut(s) 140
AcsI RAATTY 1 cut(s) 238
AfaI GTAC 1 cut(s) 381
AgsI TTSAA 3 cut(s) 46, 238, 337
AjuI GAANNNNNNNTTGG 2 cut(s) 170, 202
AluBI AGCT 3 cut(s) 171, 300, 493
AluI AGCT 3 cut(s) 171, 300, 493
Alw21I GWGCWC 1 cut(s) 309
Alw26I GTCTC 1 cut(s) 561
Alw44I GTGCAC 1 cut(s) 305
AlwI GGATC 1 cut(s) 140
Ama87I CYCGRG 1 cut(s) 486
ApaLI GTGCAC 1 cut(s) 305
ApoI RAATTY 1 cut(s) 238
AsuC2I CCSGG 1 cut(s) 522
AsuHPI GGTGA 1 cut(s) 83
AvaI CYCGRG 1 cut(s) 486
BaeGI GKGCMC 1 cut(s) 309
BaeI ACNNNNGTAYC 6 cut(s) 174, 207, 371, 404, 497, 530
BauI CACGAG 1 cut(s) 383
BbsI GAAGAC 1 cut(s) 188
Bbv12I GWGCWC 1 cut(s) 309
BccI CCATC 2 cut(s) 52, 401
BclI TGATCA 1 cut(s) 96
BcnI CCSGG 1 cut(s) 522
BcoDI GTCTC 1 cut(s) 561
BfaI CTAG 1 cut(s) 509
Bme1390I CCNGG 1 cut(s) 522
BmeT110I CYCGRG 1 cut(s) 486
BmrFI CCNGG 1 cut(s) 522
BmrI ACTGGG 1 cut(s) 459
BmuI ACTGGG 1 cut(s) 459
BpiI GAAGAC 1 cut(s) 188
BpuMI CCSGG 1 cut(s) 522
BsaBI GATNNNNATC 1 cut(s) 95
BsaWI WCCGGW 1 cut(s) 11
Bse1I ACTGG 1 cut(s) 454
Bse8I GATNNNNATC 1 cut(s) 95
BseJI GATNNNNATC 1 cut(s) 95
BseNI ACTGG 1 cut(s) 454
BseSI GKGCMC 1 cut(s) 309
BsiHKAI GWGCWC 1 cut(s) 309
BsiHKCI CYCGRG 1 cut(s) 486
BsiSI CCGG 2 cut(s) 12, 522
BslFI GGGAC 1 cut(s) 550
BsmAI GTCTC 1 cut(s) 561
BsmFI GGGAC 1 cut(s) 550
BsoBI CYCGRG 1 cut(s) 486
Bsp1286I GDGCHC 1 cut(s) 309
Bsp143I GATC 3 cut(s) 96, 145, 433
BspHI TCATGA 1 cut(s) 99
BspPI GGATC 1 cut(s) 140
BsrI ACTGG 1 cut(s) 454
BssMI GATC 3 cut(s) 96, 145, 433
BssSI CACGAG 1 cut(s) 383
Bst2BI CACGAG 1 cut(s) 383
Bst4CI ACNGT 2 cut(s) 106, 374
BstC8I GCNNGC 1 cut(s) 32
BstKTI GATC 3 cut(s) 99, 148, 436
BstMAI GTCTC 1 cut(s) 561
BstMBI GATC 3 cut(s) 96, 145, 433
BstSCI CCNGG 1 cut(s) 520
BstSLI GKGCMC 1 cut(s) 309
BstV2I GAAGAC 1 cut(s) 188
Cac8I GCNNGC 1 cut(s) 32
CciI TCATGA 1 cut(s) 99
Csp6I GTAC 1 cut(s) 380
CviAII CATG 3 cut(s) 100, 110, 571
CviJI RGCY 6 cut(s) 34, 171, 300, 493, 545, 575
CviKI_1 RGCY 6 cut(s) 34, 171, 300, 493, 545, 575
CviQI GTAC 1 cut(s) 380
DpnI GATC 3 cut(s) 98, 147, 435
DpnII GATC 3 cut(s) 96, 145, 433
Eco88I CYCGRG 1 cut(s) 486
FaeI CATG 3 cut(s) 103, 113, 574
FaiI YATR 9 cut(s) 53, 101, 111, 119, 161, 204, 303, 326, 572
FaqI GGGAC 1 cut(s) 550
FatI CATG 3 cut(s) 99, 109, 570
FbaI TGATCA 1 cut(s) 96
FblI GTMKAC 1 cut(s) 481
FspBI CTAG 1 cut(s) 509
HapII CCGG 2 cut(s) 12, 522
Hin1II CATG 3 cut(s) 103, 113, 574
HinfI GANTC 5 cut(s) 4, 65, 125, 152, 512
HpaII CCGG 2 cut(s) 12, 522
HphI GGTGA 1 cut(s) 83
Hpy166II GTNNAC 2 cut(s) 307, 482
Hpy188I TCNGA 2 cut(s) 343, 559
Hpy188III TCNNGA 5 cut(s) 100, 129, 149, 175, 488
Hpy8I GTNNAC 2 cut(s) 307, 482
HpyAV CCTTC 2 cut(s) 222, 241
HpyCH4III ACNGT 2 cut(s) 106, 374
HpyCH4IV ACGT 1 cut(s) 295
HpyCH4V TGCA 1 cut(s) 307
HpySE526I ACGT 1 cut(s) 295
Hsp92II CATG 3 cut(s) 103, 113, 574
Ksp22I TGATCA 1 cut(s) 96
Kzo9I GATC 3 cut(s) 96, 145, 433
LpnPI CCDG 6 cut(s) 25, 54, 114, 162, 435, 535
MaeI CTAG 1 cut(s) 509
MaeII ACGT 1 cut(s) 295
MaeIII GTNAC 2 cut(s) 71, 415
MalI GATC 3 cut(s) 98, 147, 435
MboI GATC 3 cut(s) 96, 145, 433
MboII GAAGA 6 cut(s) 190, 193, 359, 362, 365, 546
MhlI GDGCHC 1 cut(s) 309
MluCI AATT 2 cut(s) 83, 238
MlyI GAGTC 1 cut(s) 521
MnlI CCTC 5 cut(s) 45, 55, 244, 432, 495
MseI TTAA 2 cut(s) 26, 198
MspI CCGG 2 cut(s) 12, 522
MspR9I CCNGG 1 cut(s) 522
NciI CCSGG 1 cut(s) 522
NdeII GATC 3 cut(s) 96, 145, 433
NlaIII CATG 3 cut(s) 103, 113, 574
NmuCI GTSAC 1 cut(s) 71
PaeR7I CTCGAG 1 cut(s) 486
PagI TCATGA 1 cut(s) 99
PfeI GAWTC 4 cut(s) 4, 65, 125, 152
PleI GAGTC 1 cut(s) 520
PpsI GAGTC 1 cut(s) 520
RsaI GTAC 1 cut(s) 381
RsaNI GTAC 1 cut(s) 380
SaqAI TTAA 2 cut(s) 26, 198
Sau3AI GATC 3 cut(s) 96, 145, 433
SchI GAGTC 1 cut(s) 521
ScrFI CCNGG 1 cut(s) 522
SduI GDGCHC 1 cut(s) 309
SetI ASST 9 cut(s) 26, 173, 214, 298, 302, 381, 469, 487, 495
Sfr274I CTCGAG 1 cut(s) 486
SlaI CTCGAG 1 cut(s) 486
SmlI CTYRAG 1 cut(s) 486
SmoI CTYRAG 1 cut(s) 486
Sse9I AATT 2 cut(s) 83, 238
SspMI CTAG 1 cut(s) 509
StyD4I CCNGG 1 cut(s) 520
TaaI ACNGT 2 cut(s) 106, 374
TaiI ACGT 1 cut(s) 298
TaqI TCGA 2 cut(s) 176, 487
TasI AATT 2 cut(s) 83, 238
TfiI GAWTC 4 cut(s) 4, 65, 125, 152
Tru1I TTAA 2 cut(s) 26, 198
Tru9I TTAA 2 cut(s) 26, 198
TseFI GTSAC 1 cut(s) 71
Tsp45I GTSAC 1 cut(s) 71
TspDTI ATGAA 4 cut(s) 17, 98, 144, 360
VneI GTGCAC 1 cut(s) 305
XapI RAATTY 1 cut(s) 238
XhoI CTCGAG 1 cut(s) 486
XmiI GTMKAC 1 cut(s) 481
XspI CTAG 1 cut(s) 509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.