AT3G33528

structural constituent of ribosome

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
14082640 .. 14084346
1707 bp
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UTR
Exon/CDS
Intron
AT3G33528.5

Sequence Viewer

Length: 363 bp
ATGGGTGATAGTCAAGAATTCTCAGAAGTTCCTGATCTAAGTCAATGGTGTTCGAGTTATATCTATGAGTCACCGATGATGGATACAAGTGATGGTCTTGGGTTTGCTTTTCTTGGAGAAAGTAAAAGTATAAAGGAAATGGAATTAGTCTCTTCTCACGCTAAAGATATGTCTCAGTCCCAAATTGAGTTTTCAGAAGATATTATGAATCTCGTCGTTGAGGACAGTGAGATAGATGAAGACAACAGTCTTTGGGGAAAACCTAAGAGAAAAGGTAGCAATGTTTTCCGAAAACCTAAGAGAAAGGATGAGACTACAACAACCTATGAAGCTGAGCTAAATTACTTGAAGAACCGAGTCTAA

Protein Analysis

120

Amino Acids

13.75

Weight (kDa)

4.52

Isoelectric Point (pI)

52.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 17
AgsI TTSAA 1 cut(s) 349
AluBI AGCT 2 cut(s) 332, 337
AluI AGCT 2 cut(s) 332, 337
Alw26I GTCTC 3 cut(s) 154, 177, 305
ApoI RAATTY 1 cut(s) 17
AsuHPI GGTGA 2 cut(s) 17, 63
BbsI GAAGAC 1 cut(s) 246
BccI CCATC 2 cut(s) 73, 86
BciVI GTATCC 1 cut(s) 76
BcoDI GTCTC 3 cut(s) 154, 177, 305
BfuI GTATCC 1 cut(s) 76
BlpI GCTNAGC 1 cut(s) 333
BoxI GACNNNNGTC 1 cut(s) 246
BpiI GAAGAC 1 cut(s) 246
Bpu1102I GCTNAGC 1 cut(s) 333
Bse3DI GCAATG 1 cut(s) 286
BseGI GGATG 1 cut(s) 313
BseMI GCAATG 1 cut(s) 286
BseMII CTCAG 3 cut(s) 36, 188, 324
BslFI GGGAC 1 cut(s) 163
BsmAI GTCTC 3 cut(s) 154, 177, 305
BsmFI GGGAC 1 cut(s) 163
Bsp143I GATC 1 cut(s) 34
Bsp1720I GCTNAGC 1 cut(s) 333
BspCNI CTCAG 3 cut(s) 35, 187, 325
BsrDI GCAATG 1 cut(s) 286
BssMI GATC 1 cut(s) 34
Bst4CI ACNGT 2 cut(s) 227, 248
Bst6I CTCTTC 1 cut(s) 157
BstDEI CTNAG 6 cut(s) 22, 38, 174, 264, 297, 333
BstF5I GGATG 1 cut(s) 313
BstKTI GATC 1 cut(s) 37
BstMAI GTCTC 3 cut(s) 154, 177, 305
BstMBI GATC 1 cut(s) 34
BstPAI GACNNNNGTC 1 cut(s) 246
BstV2I GAAGAC 1 cut(s) 246
BsuI GTATCC 1 cut(s) 76
BtsCI GGATG 1 cut(s) 313
BtsIMutI CAGTG 1 cut(s) 232
CviJI RGCY 2 cut(s) 332, 337
CviKI_1 RGCY 2 cut(s) 332, 337
DdeI CTNAG 6 cut(s) 22, 38, 174, 264, 297, 333
DpnI GATC 1 cut(s) 36
DpnII GATC 1 cut(s) 34
Eam1104I CTCTTC 1 cut(s) 157
EarI CTCTTC 1 cut(s) 157
EcoRI GAATTC 1 cut(s) 17
FaiI YATR 6 cut(s) 60, 66, 131, 170, 206, 327
FaqI GGGAC 1 cut(s) 163
FokI GGATG 1 cut(s) 320
HinfI GANTC 3 cut(s) 68, 208, 357
HphI GGTGA 2 cut(s) 17, 63
Hpy188I TCNGA 3 cut(s) 25, 196, 290
Hpy188III TCNNGA 2 cut(s) 14, 32
Hpy99I CGWCG 1 cut(s) 218
HpyCH4III ACNGT 2 cut(s) 227, 248
HpyF3I CTNAG 6 cut(s) 22, 38, 174, 264, 297, 333
Kzo9I GATC 1 cut(s) 34
LpnPI CCDG 1 cut(s) 45
MaeIII GTNAC 1 cut(s) 69
MalI GATC 1 cut(s) 36
MboI GATC 1 cut(s) 34
MboII GAAGA 4 cut(s) 144, 209, 251, 361
MluCI AATT 4 cut(s) 17, 143, 183, 340
MlyI GAGTC 1 cut(s) 77
MnlI CCTC 1 cut(s) 214
NdeII GATC 1 cut(s) 34
NmuCI GTSAC 1 cut(s) 69
PfeI GAWTC 1 cut(s) 208
PleI GAGTC 1 cut(s) 76
PpsI GAGTC 1 cut(s) 76
PshAI GACNNNNGTC 1 cut(s) 246
Sau3AI GATC 1 cut(s) 34
SchI GAGTC 1 cut(s) 77
SetI ASST 6 cut(s) 265, 277, 298, 326, 334, 339
SgeI CNNG 9 cut(s) 26, 44, 66, 99, 110, 125, 170, 224, 358
Sse9I AATT 4 cut(s) 17, 143, 183, 340
TaaI ACNGT 2 cut(s) 227, 248
TaqI TCGA 1 cut(s) 53
TasI AATT 4 cut(s) 17, 143, 183, 340
TfiI GAWTC 1 cut(s) 208
TscAI CASTG 1 cut(s) 232
TseFI GTSAC 1 cut(s) 69
Tsp45I GTSAC 1 cut(s) 69
TspDTI ATGAA 3 cut(s) 221, 252, 342
TspRI CASTG 1 cut(s) 232
XapI RAATTY 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.