Rh6CG285600

isoform X1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
46355735 .. 46362716
6982 bp
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UTR
Exon/CDS
Intron
Rh6CG285600.1

Sequence Viewer

Length: 375 bp
ATGGAAAATGGAAATAAAGATGAAGTCTTTGTTCATAAGAAGCAGAACTCAGATGAGGTTGTCAAAAGTGTATGCAAGGATATCCATGGGGTAACTCAGGTTGATGACAACAAGGCAATAAATGTAGAAGCTACATACACAGGACTAATGGGTCTAAAGAGGCAAAAGTCTGTGATCCTACTTGGTGGCCTTGCAAAGGATGTGACTGAGCAAGGAGAAACTGTAAAAGTTAGAGTAACAAAAGCACTTATGGAATATGCATACATAAATTCGATCCCTGCTGATCTGATTCCTTTGCTGGATTCGATTCGGTTCGATCCCTGCTCAATTGGGTGCTTGCTTATGTCTCAAGACTCATTGGGGACCTTGGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

124

Amino Acids

13.54

Weight (kDa)

5.31

Isoelectric Point (pI)

30.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 150
AclWI GGATC 3 cut(s) 169, 268, 311
AcsI RAATTY 1 cut(s) 268
AfiI CCNNNNNNNGG 1 cut(s) 196
AluBI AGCT 1 cut(s) 131
AluI AGCT 1 cut(s) 131
Alw26I GTCTC 1 cut(s) 351
AlwI GGATC 3 cut(s) 169, 268, 311
AoxI GGCC 1 cut(s) 187
ApoI RAATTY 1 cut(s) 268
AspS9I GGNCC 1 cut(s) 363
AvaII GGWCC 1 cut(s) 363
BcoDI GTCTC 1 cut(s) 351
Bme18I GGWCC 1 cut(s) 363
BmgT120I GGNCC 1 cut(s) 363
BmiI GGNNCC 1 cut(s) 364
BpuEI CTTGAG 1 cut(s) 333
BsaJI CCNNGG 2 cut(s) 85, 366
BsaXI ACNNNNNCTCC 2 cut(s) 207, 237
Bsc4I CCNNNNNNNGG 1 cut(s) 196
BseDI CCNNGG 2 cut(s) 85, 366
BseGI GGATG 1 cut(s) 205
BseLI CCNNNNNNNGG 1 cut(s) 196
BseMII CTCAG 3 cut(s) 63, 110, 198
BshFI GGCC 1 cut(s) 189
BslI CCNNNNNNNGG 1 cut(s) 196
BsmAI GTCTC 1 cut(s) 351
BsnI GGCC 1 cut(s) 189
Bsp143I GATC 4 cut(s) 174, 273, 283, 316
Bsp19I CCATGG 1 cut(s) 85
BspANI GGCC 1 cut(s) 189
BspCNI CTCAG 3 cut(s) 62, 109, 199
BspLI GGNNCC 1 cut(s) 364
BspPI GGATC 3 cut(s) 169, 268, 311
BssECI CCNNGG 2 cut(s) 85, 366
BssMI GATC 4 cut(s) 174, 273, 283, 316
BssT1I CCWWGG 2 cut(s) 85, 366
Bst4CI ACNGT 1 cut(s) 223
BstC8I GCNNGC 1 cut(s) 338
BstDEI CTNAG 3 cut(s) 49, 96, 207
BstDSI CCRYGG 1 cut(s) 85
BstENI CCTNNNNNAGG 1 cut(s) 194
BstF5I GGATG 1 cut(s) 205
BstKTI GATC 4 cut(s) 177, 276, 286, 319
BstMAI GTCTC 1 cut(s) 351
BstMBI GATC 4 cut(s) 174, 273, 283, 316
BsuRI GGCC 1 cut(s) 189
BtgI CCRYGG 1 cut(s) 85
BtsCI GGATG 1 cut(s) 205
Cac8I GCNNGC 1 cut(s) 338
Cfr13I GGNCC 1 cut(s) 363
CviAII CATG 2 cut(s) 86, 372
CviJI RGCY 2 cut(s) 131, 189
CviKI_1 RGCY 2 cut(s) 131, 189
DdeI CTNAG 3 cut(s) 49, 96, 207
DpnI GATC 4 cut(s) 176, 275, 285, 318
DpnII GATC 4 cut(s) 174, 273, 283, 316
DrdI GACNNNNNNGTC 1 cut(s) 150
DseDI GACNNNNNNGTC 1 cut(s) 150
Eco130I CCWWGG 2 cut(s) 85, 366
Eco32I GATATC 1 cut(s) 82
Eco47I GGWCC 1 cut(s) 363
EcoNI CCTNNNNNAGG 1 cut(s) 194
EcoO109I RGGNCCY 1 cut(s) 363
EcoRV GATATC 1 cut(s) 82
EcoT14I CCWWGG 2 cut(s) 85, 366
EcoT22I ATGCAT 1 cut(s) 262
ErhI CCWWGG 2 cut(s) 85, 366
FaeI CATG 2 cut(s) 89, 375
FatI CATG 2 cut(s) 85, 371
FokI GGATG 1 cut(s) 212
HaeIII GGCC 1 cut(s) 189
Hin1II CATG 2 cut(s) 89, 375
HinfI GANTC 4 cut(s) 289, 302, 307, 353
Hpy188I TCNGA 2 cut(s) 52, 288
Hpy188III TCNNGA 1 cut(s) 350
HpyCH4III ACNGT 1 cut(s) 223
HpyCH4V TGCA 3 cut(s) 75, 194, 260
HpyF3I CTNAG 3 cut(s) 49, 96, 207
Hsp92II CATG 2 cut(s) 89, 375
Kzo9I GATC 4 cut(s) 174, 273, 283, 316
LpnPI CCDG 5 cut(s) 83, 126, 284, 291, 334
MaeIII GTNAC 3 cut(s) 91, 202, 235
MalI GATC 4 cut(s) 176, 275, 285, 318
MboI GATC 4 cut(s) 174, 273, 283, 316
MfeI CAATTG 1 cut(s) 327
MluCI AATT 2 cut(s) 268, 327
MlyI GAGTC 1 cut(s) 347
MnlI CCTC 2 cut(s) 49, 153
Mph1103I ATGCAT 1 cut(s) 262
MunI CAATTG 1 cut(s) 327
NcoI CCATGG 1 cut(s) 85
NdeII GATC 4 cut(s) 174, 273, 283, 316
NlaIII CATG 2 cut(s) 89, 375
NlaIV GGNNCC 1 cut(s) 364
NmuCI GTSAC 1 cut(s) 202
NsiI ATGCAT 1 cut(s) 262
PfeI GAWTC 3 cut(s) 289, 302, 307
PleI GAGTC 1 cut(s) 347
PpsI GAGTC 1 cut(s) 347
PpuMI RGGWCCY 1 cut(s) 363
Psp5II RGGWCCY 1 cut(s) 363
PspN4I GGNNCC 1 cut(s) 364
PspPI GGNCC 1 cut(s) 363
PspPPI RGGWCCY 1 cut(s) 363
Sau3AI GATC 4 cut(s) 174, 273, 283, 316
Sau96I GGNCC 1 cut(s) 363
SchI GAGTC 1 cut(s) 347
SetI ASST 4 cut(s) 60, 102, 133, 368
SinI GGWCC 1 cut(s) 363
SmlI CTYRAG 1 cut(s) 348
SmoI CTYRAG 1 cut(s) 348
Sse9I AATT 2 cut(s) 268, 327
StyI CCWWGG 2 cut(s) 85, 366
TaaI ACNGT 1 cut(s) 223
TaqI TCGA 3 cut(s) 272, 305, 315
TasI AATT 2 cut(s) 268, 327
TfiI GAWTC 3 cut(s) 289, 302, 307
TseFI GTSAC 1 cut(s) 202
Tsp45I GTSAC 1 cut(s) 202
TspDTI ATGAA 2 cut(s) 23, 36
VpaK11BI GGWCC 1 cut(s) 363
XagI CCTNNNNNAGG 1 cut(s) 194
XapI RAATTY 1 cut(s) 268
Zsp2I ATGCAT 1 cut(s) 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.