Rh6AG404200

isoform X1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
60092822 .. 60095178
2357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG404200.1

Sequence Viewer

Length: 264 bp
ATGGAAAATGGAAGTAAAGTTGAAGTCTTTGTTCATAAGAAGCAGAACTCAGATGAGGTTGTCAAAAGTGGTAGCTCTTCACAAAACCAATGCTTAATATGCAACGATGTCCATGAGGTAACTTGGGTTGATGACAAAAAGGCAACAAATGTAGAAGCTACATACACAGGACTAATGGGTCTAAAGAGGCAAAAGTCTGTGATCCTACTTGGTGGCCTTGCAAAGTTACTCAAGCAGGTTTTGAATTGGCTTCAAGCTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

9.68

Weight (kDa)

8.62

Isoelectric Point (pI)

21.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 177
Acc36I ACCTGC 1 cut(s) 226
AclWI GGATC 1 cut(s) 196
AgsI TTSAA 3 cut(s) 23, 244, 254
AluBI AGCT 3 cut(s) 75, 158, 257
AluI AGCT 3 cut(s) 75, 158, 257
AlwI GGATC 1 cut(s) 196
AoxI GGCC 1 cut(s) 214
BfuAI ACCTGC 1 cut(s) 226
BpuEI CTTGAG 1 cut(s) 215
BseMII CTCAG 1 cut(s) 63
BshFI GGCC 1 cut(s) 216
BsnI GGCC 1 cut(s) 216
Bsp143I GATC 1 cut(s) 201
BspANI GGCC 1 cut(s) 216
BspCNI CTCAG 1 cut(s) 62
BspMI ACCTGC 1 cut(s) 226
BspPI GGATC 1 cut(s) 196
BspQI GCTCTTC 1 cut(s) 82
BssMI GATC 1 cut(s) 201
Bst6I CTCTTC 1 cut(s) 82
BstDEI CTNAG 1 cut(s) 49
BstKTI GATC 1 cut(s) 204
BstMBI GATC 1 cut(s) 201
BstMWI GCNNNNNNNGC 1 cut(s) 99
BsuRI GGCC 1 cut(s) 216
BveI ACCTGC 1 cut(s) 226
CviAII CATG 1 cut(s) 113
CviJI RGCY 5 cut(s) 75, 158, 216, 250, 257
CviKI_1 RGCY 5 cut(s) 75, 158, 216, 250, 257
DdeI CTNAG 1 cut(s) 49
DpnI GATC 1 cut(s) 203
DpnII GATC 1 cut(s) 201
DrdI GACNNNNNNGTC 1 cut(s) 177
DseDI GACNNNNNNGTC 1 cut(s) 177
Eam1104I CTCTTC 1 cut(s) 82
EarI CTCTTC 1 cut(s) 82
FaeI CATG 1 cut(s) 116
FaiI YATR 4 cut(s) 36, 100, 114, 163
FatI CATG 1 cut(s) 112
HaeIII GGCC 1 cut(s) 216
Hin1II CATG 1 cut(s) 116
HindIII AAGCTT 1 cut(s) 255
Hpy188I TCNGA 1 cut(s) 52
HpyCH4V TGCA 2 cut(s) 102, 221
HpyF10VI GCNNNNNNNGC 1 cut(s) 99
HpyF3I CTNAG 1 cut(s) 49
Hsp92II CATG 1 cut(s) 116
Kzo9I GATC 1 cut(s) 201
LguI GCTCTTC 1 cut(s) 82
LpnPI CCDG 2 cut(s) 153, 221
MaeIII GTNAC 2 cut(s) 118, 225
MalI GATC 1 cut(s) 203
MboI GATC 1 cut(s) 201
MboII GAAGA 1 cut(s) 69
MluCI AATT 1 cut(s) 244
MnlI CCTC 3 cut(s) 49, 109, 180
MseI TTAA 1 cut(s) 95
MwoI GCNNNNNNNGC 1 cut(s) 99
NdeII GATC 1 cut(s) 201
NlaIII CATG 1 cut(s) 116
PciSI GCTCTTC 1 cut(s) 82
SapI GCTCTTC 1 cut(s) 82
SaqAI TTAA 1 cut(s) 95
Sau3AI GATC 1 cut(s) 201
SetI ASST 6 cut(s) 60, 77, 120, 160, 240, 259
SgeI CNNG 7 cut(s) 125, 135, 180, 221, 230, 244, 248
SmlI CTYRAG 1 cut(s) 230
SmoI CTYRAG 1 cut(s) 230
Sse9I AATT 1 cut(s) 244
TasI AATT 1 cut(s) 244
Tru1I TTAA 1 cut(s) 95
Tru9I TTAA 1 cut(s) 95
TspDTI ATGAA 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.