AT4G07526

structural constituent of ribosome

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
4358652 .. 4360161
1510 bp
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UTR
Exon/CDS
Intron
AT4G07526.3

Sequence Viewer

Length: 339 bp
ATGGGTGATAGTCAAGAATTCTCAGAAGTTCCTGATCTAAGTCAATGGTGTTCGAGTTGTGTCTATGAGTCACCGATGATGGATACAAGTGATGGTCTTGAGTTTGCGTTTCTTGGAGAAAGTAAAGGTAGAAAGGAAATGGAATTAGTCTCTTCTCAGGCTAAAGTTATGTCTCATTCGCAGATTGAGTTTTCAGAAGATATAATGAATCTCGTCGTTGAGGACAGTGAGATAGATGAAGACAACAGTCTTTGGGGAAAACCTAAGAGAAAAGGTAGCAATTTTTTCGAAAACCTAAGAGAAAGGAAGAGACTACAACAACCTATGAAGCTGAGCTAA

Protein Analysis

112

Amino Acids

12.87

Weight (kDa)

4.56

Isoelectric Point (pI)

60.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 17
AluBI AGCT 2 cut(s) 331, 336
AluI AGCT 2 cut(s) 331, 336
Alw26I GTCTC 3 cut(s) 154, 177, 304
ApoI RAATTY 1 cut(s) 17
AsuHPI GGTGA 2 cut(s) 17, 63
AsuII TTCGAA 1 cut(s) 288
BbsI GAAGAC 1 cut(s) 246
BccI CCATC 2 cut(s) 73, 86
BcgI CGANNNNNNTGC 2 cut(s) 268, 302
BciVI GTATCC 1 cut(s) 76
BcoDI GTCTC 3 cut(s) 154, 177, 304
BfuI GTATCC 1 cut(s) 76
BlpI GCTNAGC 1 cut(s) 332
BoxI GACNNNNGTC 1 cut(s) 246
BpiI GAAGAC 1 cut(s) 246
Bpu1102I GCTNAGC 1 cut(s) 332
Bpu14I TTCGAA 1 cut(s) 288
BpuEI CTTGAG 1 cut(s) 119
BseMII CTCAG 3 cut(s) 36, 170, 323
BsmAI GTCTC 3 cut(s) 154, 177, 304
Bsp119I TTCGAA 1 cut(s) 288
Bsp143I GATC 1 cut(s) 34
Bsp1720I GCTNAGC 1 cut(s) 332
BspCNI CTCAG 3 cut(s) 35, 169, 324
BspT104I TTCGAA 1 cut(s) 288
BssMI GATC 1 cut(s) 34
Bst4CI ACNGT 2 cut(s) 227, 248
Bst6I CTCTTC 2 cut(s) 157, 302
BstBI TTCGAA 1 cut(s) 288
BstDEI CTNAG 6 cut(s) 22, 38, 156, 264, 296, 332
BstKTI GATC 1 cut(s) 37
BstMAI GTCTC 3 cut(s) 154, 177, 304
BstMBI GATC 1 cut(s) 34
BstPAI GACNNNNGTC 1 cut(s) 246
BstV2I GAAGAC 1 cut(s) 246
BsuI GTATCC 1 cut(s) 76
BtsIMutI CAGTG 1 cut(s) 232
CviJI RGCY 3 cut(s) 161, 331, 336
CviKI_1 RGCY 3 cut(s) 161, 331, 336
DdeI CTNAG 6 cut(s) 22, 38, 156, 264, 296, 332
DpnI GATC 1 cut(s) 36
DpnII GATC 1 cut(s) 34
Eam1104I CTCTTC 2 cut(s) 157, 302
EarI CTCTTC 2 cut(s) 157, 302
EcoRI GAATTC 1 cut(s) 17
FaiI YATR 4 cut(s) 66, 170, 203, 326
HinfI GANTC 2 cut(s) 68, 208
HphI GGTGA 2 cut(s) 17, 63
Hpy188I TCNGA 2 cut(s) 25, 196
Hpy188III TCNNGA 3 cut(s) 14, 32, 98
Hpy99I CGWCG 1 cut(s) 218
HpyCH4III ACNGT 2 cut(s) 227, 248
HpyF3I CTNAG 6 cut(s) 22, 38, 156, 264, 296, 332
Kzo9I GATC 1 cut(s) 34
LpnPI CCDG 2 cut(s) 45, 143
MaeIII GTNAC 1 cut(s) 69
MalI GATC 1 cut(s) 36
MboI GATC 1 cut(s) 34
MboII GAAGA 4 cut(s) 144, 209, 251, 319
MluCI AATT 3 cut(s) 17, 143, 280
MlyI GAGTC 1 cut(s) 77
MnlI CCTC 1 cut(s) 214
NdeII GATC 1 cut(s) 34
NmuCI GTSAC 1 cut(s) 69
NspV TTCGAA 1 cut(s) 288
PfeI GAWTC 1 cut(s) 208
PleI GAGTC 1 cut(s) 76
PpsI GAGTC 1 cut(s) 76
PshAI GACNNNNGTC 1 cut(s) 246
Sau3AI GATC 1 cut(s) 34
SchI GAGTC 1 cut(s) 77
SetI ASST 7 cut(s) 130, 265, 277, 297, 325, 333, 338
SfuI TTCGAA 1 cut(s) 288
SgeI CNNG 8 cut(s) 26, 44, 66, 99, 110, 125, 170, 224
SmlI CTYRAG 1 cut(s) 98
SmoI CTYRAG 1 cut(s) 98
Sse9I AATT 3 cut(s) 17, 143, 280
TaaI ACNGT 2 cut(s) 227, 248
TaqI TCGA 2 cut(s) 53, 288
TasI AATT 3 cut(s) 17, 143, 280
TfiI GAWTC 1 cut(s) 208
TscAI CASTG 1 cut(s) 232
TseFI GTSAC 1 cut(s) 69
Tsp45I GTSAC 1 cut(s) 69
TspDTI ATGAA 2 cut(s) 221, 252
TspRI CASTG 1 cut(s) 232
XapI RAATTY 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.