Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000550

Physical Location & Seq

Genomic Coordinates Reverse (-)

17802690 .. 17806705

Gene Structure 4016 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G37870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGTCGGCCGGTAACGGAAATGCTACTAACGGTGACGGAGGGTTTAGTTTCCCTAAAGGACCGGTGATGCCGAAGATAACGACCGGAGCAGCAAAGAGAGGTAGCGGAGTCTGCCACGACGATAGTGGTCCGACGGTGAATGCCACAACCATCGATGAGCTTCATTCGTTACAGAAGAAACGTTCTGCTCCTACCACACCGATCAACCAAAACGCCGCCGCTGCTTTTGCCGCCGTCTCCGAGGAGGAGCGTCAGAAGATTCAGCTTCAATCTATCAGTGCATCGTTAGCATCGTTAACGAGAGAGTCAGGACCAAAGGTGGTGAGAGGAGATCCGGCGGAGAAGAAGACCGATGGTTCAACTACTCCGGCGTACGCTCACGGCCAACATCATTCTATCTTTTCTCCGGCTACTGGTGCTGTCAGTGATAGCTCCTTGAAGTTTACTCACGTCCTCTACAATCTTTCGCCTGCAGAGCTTTATGAGCAAGCTATTAAGTATGAGAAAGGTTCGTTTATCACTTCTAATGGAGCTTTGGCGACGCTTTCTGGTGCTAAGACTGGTCGTGCTCCCAGAGATAAGCGTGTTGTTAGAGATGCTACTACTGAGGATGAGCTTTGGTGGGGAAAGGGTTCGCCGAATATCGAAATGGATGAACATACTTTCATGGTGAACAGAGAAAGAGCTGTTGATTACTTGAATTCCTTGGAAAAGGTCTTTGTCAATGACCAATACTTAAACTGGGATCCAGAGAACAGAATCAAAGTCAGGATTGTCTCAGCTAGAGCTTACCATTCATTGTTTATGCACAACATGTGTATCCGACCAACTCAGGAGGAGCTTGAGAGCTTTGGTACTCCGGATTTTACTATATACAATGCTGGGCAGTTTCCATGTAATCGTTACACTCATTACATGACTTCGTCCACTAGCGTAGACCTTAATCTGGCTAGGAGGGAAATGGTTATACTTGGTACTCAGTATGCTGGGGAAATGAAGAAGGGTCTTTTCAGTGTGATGCATTACCTTATGCCTAAGCGTCGTATTCTCTCCCTTCATTCTGGATGCAATATGGGAAAAGATGGAGATGTTGCTCTCTTCTTTGGACTTTCAGGTACCGGGAAGACAACGCTGTCTACTGATCACAACAGGTATCTTATTGGAGATGATGAGCATTGTTGGACTGAGACTGGTGTTTCGAACATTGAGGGTGGGTGCTATGCTAAGTGTGTTGATCTTTCGAGGGAGAAGGAGCCTGATATCTGGAACGCTATCAAGTTTGGAACAGTTTTGGAAAATGTTGTGTTTGATGAGCACACCAGAGAAGTGGATTACTCTGATAAATCTGTTACAGAGAACACACGTGCTGCCTACCCAATTGAGTTCATTCCAAATGCGAAAATACCTTGTGTTGGTCCACACCCGACAAATGTGATACTTCTGGCTTGTGATGCCTTTGGTGTTCTCCCACCTGTGAGCAAGCTGAATCTGGCACAAACCATGTACCACTTCATCAGTGGTTACACTGCTCTGGTTGCTGGCACAGAGGATGGTATCAAGGAGCCAACAGCAACATTCTCAGCTTGCTTTGGTGCAGCTTTCATAATGTTGCATCCCACAAAGTATGCAGCTATGTTAGCTGAGAAGATGAAGTCACAAGGTGCTACTGGTTGGCTCGTCAACACTGGTTGGTCTGGTGGCAGTTATGGTGTTGGAAACAGAATCAAGCTGGCATACACTAGAAAGATCATCGATGCAATCCATTCGGGCAGTCTCTTGAAGGCAAACTACAAGAAAACCGAAATCTTTGGATTTGAAATCCCAACTGAGATCGAAGGGATACCTTCAGAGATCTTGGACCCCGTCAACTCCTGGTCTGATAAGAAGGCACACAAAGATACTCTGGTGAAACTGGGAGGTCTGTTCAAGAAGAACTTCGAGGTTTTTGCTAACCATAAGATTGGTGTGGATGGTAAGCTTACGGAGGAGATTCTCGCTGCTGGTCCTATCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004611 GO:0004612 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006006 GO:0006094 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016020 GO:0016036 GO:0016051 GO:0016829 GO:0016830 GO:0016831 GO:0019318 GO:0019319 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0042221 GO:0042594 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046364 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0071496 GO:0071704 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PEPCK_ATP

Protein Analysis

671

Amino Acids

73.4

Weight (kDa)

6.61

Isoelectric Point (pI)

37.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPCK_ATP	PF01293	150 - 617	6.8e-213	Phosphoenolpyruvate carboxykinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca	FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica	MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica	Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis	pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis	RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata	RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora	Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii	Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa	Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha	Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana	Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1132
Acc65I	GGTACC	1 cut(s)	1115
AccB1I	GGYRCC	1 cut(s)	1115
AccI	GTMKAC	2 cut(s)	936, 1136
AccIII	TCCGGA	1 cut(s)	859
AciI	CCGC	5 cut(s)	105, 216, 219, 231, 338
AclI	AACGTT	1 cut(s)	181
AclWI	GGATC	3 cut(s)	326, 740, 753
AcoI	YGGCCR	2 cut(s)	6, 382
AcsI	RAATTY	1 cut(s)	700
AcuI	CTGAAG	1 cut(s)	1830
AcvI	CACGTG	1 cut(s)	1364
AdeI	CACNNNGTG	1 cut(s)	1661
AfaI	GTAC	5 cut(s)	374, 856, 976, 1117, 1505
AfiI	CCNNNNNNNGG	3 cut(s)	413, 946, 1412
AflIII	ACRYGT	2 cut(s)	813, 1361
AgeI	ACCGGT	1 cut(s)	61
AgsI	TTSAA	7 cut(s)	269, 360, 439, 700, 1780, 1817, 1927
AjiI	CACGTC	1 cut(s)	451
AjnI	CCWGG	1 cut(s)	1871
Alw21I	GWGCWC	2 cut(s)	571, 1317
Alw26I	GTCTC	4 cut(s)	241, 781, 1181, 1778
AlwI	GGATC	3 cut(s)	326, 740, 753
Aor13HI	TCCGGA	1 cut(s)	859
AoxI	GGCC	2 cut(s)	6, 382
ApeKI	GCWGC	6 cut(s)	89, 221, 1367, 1595, 1628, 1997
ApoI	RAATTY	1 cut(s)	700
ArsI	GACNNNNNNTTYG	2 cut(s)	1180, 1212
AsiGI	ACCGGT	1 cut(s)	61
Asp700I	GAANNNNTTC	2 cut(s)	631, 1934
Asp718I	GGTACC	1 cut(s)	1115
AspS9I	GGNCC	6 cut(s)	59, 128, 311, 1415, 1858, 2003
AsuC2I	CCSGG	1 cut(s)	1120
AsuHPI	GGTGA	6 cut(s)	44, 76, 148, 334, 682, 1918
AsuII	TTCGAA	1 cut(s)	1199
AvaII	GGWCC	6 cut(s)	59, 128, 311, 1415, 1858, 2003
BaeI	ACNNNNGTAYC	4 cut(s)	802, 835, 1890, 1923
BamHI	GGATCC	1 cut(s)	745
BanI	GGYRCC	1 cut(s)	1115
BarI	GAAGNNNNNNTAC	2 cut(s)	1772, 1804
BbrPI	CACGTG	1 cut(s)	1364
BbsI	GAAGAC	2 cut(s)	353, 1130
Bbv12I	GWGCWC	2 cut(s)	571, 1317
BbvI	GCAGC	6 cut(s)	101, 208, 1354, 1607, 1640, 1984
BccI	CCATC	5 cut(s)	158, 347, 1076, 1544, 1964
BceAI	ACGGC	2 cut(s)	218, 397
BcgI	CGANNNNNNTGC	4 cut(s)	1746, 1780, 1928, 1962
BciT130I	CCWGG	1 cut(s)	1873
BciVI	GTATCC	2 cut(s)	830, 1833
BclI	TGATCA	1 cut(s)	1141
BcnI	CCSGG	1 cut(s)	1120
BcoDI	GTCTC	4 cut(s)	241, 781, 1181, 1778
BfaI	CTAG	4 cut(s)	783, 930, 951, 1740
BfmI	CTRYAG	1 cut(s)	471
BfuI	GTATCC	2 cut(s)	830, 1833
BglII	AGATCT	1 cut(s)	1851
BisI	GCNGC	9 cut(s)	90, 216, 219, 222, 231, 1368, 1596, 1629, 1998
BlsI	GCNGC	9 cut(s)	91, 217, 220, 223, 232, 1369, 1597, 1630, 1999
Bme1390I	CCNGG	2 cut(s)	1120, 1873
Bme18I	GGWCC	6 cut(s)	59, 128, 311, 1415, 1858, 2003
BmgBI	CACGTC	1 cut(s)	451
BmgT120I	GGNCC	6 cut(s)	59, 128, 311, 1415, 1858, 2003
BmiI	GGNNCC	5 cut(s)	747, 1117, 1254, 1563, 1860
BmrFI	CCNGG	2 cut(s)	1120, 1873
BmrI	ACTGGG	2 cut(s)	751, 1922
BmsI	GCATC	9 cut(s)	57, 290, 299, 586, 1008, 1055, 1441, 1621, 1744
BmuI	ACTGGG	2 cut(s)	751, 1922
BpiI	GAAGAC	2 cut(s)	353, 1130
Bpu10I	CCTNAGC	1 cut(s)	1035
Bpu14I	TTCGAA	1 cut(s)	1199
BpuEI	CTTGAG	1 cut(s)	863
BpuMI	CCSGG	1 cut(s)	1120
Bsa29I	ATCGAT	2 cut(s)	153, 1752
BsaAI	YACGTR	1 cut(s)	1364
BsaJI	CCNNGG	2 cut(s)	240, 705
BsaWI	WCCGGW	3 cut(s)	61, 83, 859
Bsc4I	CCNNNNNNNGG	3 cut(s)	413, 946, 1412
Bse118I	RCCGGY	2 cut(s)	8, 61
Bse1I	ACTGG	7 cut(s)	418, 565, 746, 1195, 1672, 1690, 1917
BseAI	TCCGGA	1 cut(s)	859
BseBI	CCWGG	1 cut(s)	1873
BseCI	ATCGAT	2 cut(s)	153, 1752
BseDI	CCNNGG	2 cut(s)	240, 705
BseGI	GGATG	6 cut(s)	616, 658, 1070, 1555, 1612, 1975
BseLI	CCNNNNNNNGG	3 cut(s)	413, 946, 1412
BseMII	CTCAG	8 cut(s)	597, 792, 845, 992, 1176, 1593, 1632, 1818
BseNI	ACTGG	7 cut(s)	418, 565, 746, 1195, 1672, 1690, 1917
BseRI	GAGGAG	5 cut(s)	257, 260, 342, 851, 2000
BseX3I	CGGCCG	1 cut(s)	6
BseXI	GCAGC	6 cut(s)	101, 208, 1354, 1607, 1640, 1984
BseYI	CCCAGC	2 cut(s)	881, 986
BsgI	GTGCAG	1 cut(s)	1614
Bsh1285I	CGRYCG	2 cut(s)	9, 84
BshFI	GGCC	2 cut(s)	8, 384
BshNI	GGYRCC	1 cut(s)	1115
BshTI	ACCGGT	1 cut(s)	61
BshVI	ATCGAT	2 cut(s)	153, 1752
BsiEI	CGRYCG	2 cut(s)	9, 84
BsiHKAI	GWGCWC	2 cut(s)	571, 1317
BsiSI	CCGG	8 cut(s)	9, 62, 84, 335, 368, 407, 860, 1119
BsiWI	CGTACG	1 cut(s)	372
BslI	CCNNNNNNNGG	3 cut(s)	413, 946, 1412
BsmAI	GTCTC	4 cut(s)	241, 781, 1181, 1778
BsmBI	CGTCTC	1 cut(s)	241
BsmI	GAATGC	1 cut(s)	145
BsnI	GGCC	2 cut(s)	8, 384
Bsp119I	TTCGAA	1 cut(s)	1199
Bsp1286I	GDGCHC	2 cut(s)	571, 1317
Bsp13I	TCCGGA	1 cut(s)	859
Bsp143I	GATC	8 cut(s)	201, 331, 745, 1141, 1234, 1746, 1830, 1851
BspACI	CCGC	5 cut(s)	105, 216, 219, 231, 338
BspANI	GGCC	2 cut(s)	8, 384
BspCNI	CTCAG	8 cut(s)	598, 791, 844, 991, 1177, 1592, 1633, 1819
BspDI	ATCGAT	2 cut(s)	153, 1752
BspEI	TCCGGA	1 cut(s)	859
BspLI	GGNNCC	5 cut(s)	747, 1117, 1254, 1563, 1860
BspMAI	CTGCAG	1 cut(s)	475
BspPI	GGATC	3 cut(s)	326, 740, 753
BspT104I	TTCGAA	1 cut(s)	1199
BspT107I	GGYRCC	1 cut(s)	1115
BsrFI	RCCGGY	2 cut(s)	8, 61
BsrI	ACTGG	7 cut(s)	418, 565, 746, 1195, 1672, 1690, 1917
BssAI	RCCGGY	2 cut(s)	8, 61
BssECI	CCNNGG	2 cut(s)	240, 705
BssMI	GATC	8 cut(s)	201, 331, 745, 1141, 1234, 1746, 1830, 1851
BssT1I	CCWWGG	1 cut(s)	705
Bst2UI	CCWGG	1 cut(s)	1873
Bst4CI	ACNGT	3 cut(s)	32, 136, 1288
Bst6I	CTCTTC	1 cut(s)	1103
BstBAI	YACGTR	1 cut(s)	1364
BstBI	TTCGAA	1 cut(s)	1199
BstC8I	GCNNGC	6 cut(s)	471, 489, 1481, 1540, 1585, 1731
BstF5I	GGATG	6 cut(s)	616, 658, 1070, 1555, 1612, 1975
BstKTI	GATC	8 cut(s)	204, 334, 748, 1144, 1237, 1749, 1833, 1854
BstMAI	GTCTC	4 cut(s)	241, 781, 1181, 1778
BstMBI	GATC	8 cut(s)	201, 331, 745, 1141, 1234, 1746, 1830, 1851
BstMCI	CGRYCG	2 cut(s)	9, 84
BstNI	CCWGG	1 cut(s)	1873
BstNSI	RCATGY	1 cut(s)	817
BstSCI	CCNGG	2 cut(s)	1118, 1871
BstSFI	CTRYAG	1 cut(s)	471
BstV1I	GCAGC	6 cut(s)	101, 208, 1354, 1607, 1640, 1984
BstV2I	GAAGAC	2 cut(s)	353, 1130
BstX2I	RGATCY	3 cut(s)	331, 745, 1851
BstXI	CCANNNNNNTGG	2 cut(s)	1327, 1961
BstYI	RGATCY	3 cut(s)	331, 745, 1851
BstZI	CGGCCG	1 cut(s)	6
Bsu15I	ATCGAT	2 cut(s)	153, 1752
BsuI	GTATCC	2 cut(s)	830, 1833
BsuRI	GGCC	2 cut(s)	8, 384
BsuTUI	ATCGAT	2 cut(s)	153, 1752
BtrI	CACGTC	1 cut(s)	451
BtsCI	GGATG	6 cut(s)	616, 658, 1070, 1555, 1612, 1975
BtsI	GCAGTG	1 cut(s)	1524
BtsIMutI	CAGTG	6 cut(s)	283, 430, 1018, 1522, 1524, 1683
Cac8I	GCNNGC	6 cut(s)	471, 489, 1481, 1540, 1585, 1731
Cfr10I	RCCGGY	2 cut(s)	8, 61
Cfr13I	GGNCC	6 cut(s)	59, 128, 311, 1415, 1858, 2003
ClaI	ATCGAT	2 cut(s)	153, 1752
CseI	GACGC	3 cut(s)	239, 550, 1028
Csp6I	GTAC	5 cut(s)	373, 855, 975, 1116, 1504
CspAI	ACCGGT	1 cut(s)	61
CviAII	CATG	5 cut(s)	667, 814, 894, 916, 1501
CviQI	GTAC	5 cut(s)	373, 855, 975, 1116, 1504
DpnI	GATC	8 cut(s)	203, 333, 747, 1143, 1236, 1748, 1832, 1853
DpnII	GATC	8 cut(s)	201, 331, 745, 1141, 1234, 1746, 1830, 1851
DraIII	CACNNNGTG	1 cut(s)	1661
DrdI	GACNNNNNNGTC	1 cut(s)	1132
DseDI	GACNNNNNNGTC	1 cut(s)	1132
EaeI	YGGCCR	2 cut(s)	6, 382
EagI	CGGCCG	1 cut(s)	6
Eam1104I	CTCTTC	1 cut(s)	1103
EarI	CTCTTC	1 cut(s)	1103
EciI	GGCGGA	1 cut(s)	353
EclXI	CGGCCG	1 cut(s)	6
Eco130I	CCWWGG	1 cut(s)	705
Eco32I	GATATC	1 cut(s)	1261
Eco47I	GGWCC	6 cut(s)	59, 128, 311, 1415, 1858, 2003
Eco52I	CGGCCG	1 cut(s)	6
Eco57I	CTGAAG	1 cut(s)	1830
Eco72I	CACGTG	1 cut(s)	1364
EcoRI	GAATTC	1 cut(s)	700
EcoRII	CCWGG	1 cut(s)	1871
EcoRV	GATATC	1 cut(s)	1261
EcoT14I	CCWWGG	1 cut(s)	705
EcoT22I	ATGCAT	1 cut(s)	1023
ErhI	CCWWGG	1 cut(s)	705
Esp3I	CGTCTC	1 cut(s)	241
FaeI	CATG	5 cut(s)	670, 817, 897, 919, 1504
FalI	AAGNNNNNCTT	2 cut(s)	1919, 1951
FatI	CATG	5 cut(s)	666, 813, 893, 915, 1500
FbaI	TGATCA	1 cut(s)	1141
FblI	GTMKAC	2 cut(s)	936, 1136
Fnu4HI	GCNGC	9 cut(s)	90, 216, 219, 222, 231, 1368, 1596, 1629, 1998
FokI	GGATG	6 cut(s)	623, 665, 1077, 1562, 1599, 1982
Fsp4HI	GCNGC	9 cut(s)	90, 216, 219, 222, 231, 1368, 1596, 1629, 1998
FspBI	CTAG	4 cut(s)	783, 930, 951, 1740
GluI	GCNGC	9 cut(s)	90, 216, 219, 222, 231, 1368, 1596, 1629, 1998
GsaI	CCCAGC	2 cut(s)	885, 990
HaeIII	GGCC	2 cut(s)	8, 384
HapII	CCGG	8 cut(s)	9, 62, 84, 335, 368, 407, 860, 1119
HgaI	GACGC	3 cut(s)	239, 550, 1028
Hin1II	CATG	5 cut(s)	670, 817, 897, 919, 1504
HincII	GTYRAC	3 cut(s)	297, 1681, 1867
HindII	GTYRAC	3 cut(s)	297, 1681, 1867
HindIII	AAGCTT	1 cut(s)	1976
HinfI	GANTC	7 cut(s)	108, 259, 305, 759, 1486, 1722, 1990
HpaI	GTTAAC	1 cut(s)	297
HpaII	CCGG	8 cut(s)	9, 62, 84, 335, 368, 407, 860, 1119
HphI	GGTGA	6 cut(s)	44, 76, 148, 334, 682, 1918
Hpy166II	GTNNAC	9 cut(s)	297, 444, 673, 927, 937, 1137, 1418, 1681, 1867
Hpy188I	TCNGA	7 cut(s)	132, 241, 255, 824, 1339, 1849, 1879
Hpy188III	TCNNGA	9 cut(s)	309, 749, 769, 833, 860, 1062, 1264, 1777, 1927
Hpy8I	GTNNAC	9 cut(s)	297, 444, 673, 927, 937, 1137, 1418, 1681, 1867
Hpy99I	CGWCG	4 cut(s)	122, 136, 544, 1044
HpyAV	CCTTC	7 cut(s)	994, 1064, 1243, 1774, 1829, 1854, 1879
HpyCH4III	ACNGT	3 cut(s)	32, 136, 1288
HpyCH4IV	ACGT	3 cut(s)	181, 450, 1363
HpyCH4V	TGCA	9 cut(s)	281, 473, 808, 1021, 1068, 1595, 1612, 1628, 1757
HpySE526I	ACGT	3 cut(s)	181, 450, 1363
Hsp92II	CATG	5 cut(s)	670, 817, 897, 919, 1504
Kpn2I	TCCGGA	1 cut(s)	859
KpnI	GGTACC	1 cut(s)	1119
Ksp22I	TGATCA	1 cut(s)	1141
KspAI	GTTAAC	1 cut(s)	297
Kzo9I	GATC	8 cut(s)	201, 331, 745, 1141, 1234, 1746, 1830, 1851
LmnI	GCTCC	9 cut(s)	86, 193, 247, 437, 530, 574, 838, 1252, 1561
Lsp1109I	GCAGC	6 cut(s)	101, 208, 1354, 1607, 1640, 1984
LweI	GCATC	9 cut(s)	57, 290, 299, 586, 1008, 1055, 1441, 1621, 1744
MaeI	CTAG	4 cut(s)	783, 930, 951, 1740
MaeII	ACGT	3 cut(s)	181, 450, 1363
MaeIII	GTNAC	7 cut(s)	11, 32, 168, 902, 1348, 1520, 1653
MalI	GATC	8 cut(s)	203, 333, 747, 1143, 1236, 1748, 1832, 1853
MboI	GATC	8 cut(s)	201, 331, 745, 1141, 1234, 1746, 1830, 1851
MfeI	CAATTG	1 cut(s)	1377
MflI	RGATCY	3 cut(s)	331, 745, 1851
MhlI	GDGCHC	2 cut(s)	571, 1317
MluCI	AATT	2 cut(s)	700, 1377
MlyI	GAGTC	2 cut(s)	117, 314
MmeI	TCCRAC	4 cut(s)	155, 847, 1160, 1693
Mph1103I	ATGCAT	1 cut(s)	1023
MroI	TCCGGA	1 cut(s)	859
MroXI	GAANNNNTTC	2 cut(s)	631, 1934
MseI	TTAA	4 cut(s)	296, 495, 737, 942
MspA1I	CMGCKG	1 cut(s)	221
MspI	CCGG	8 cut(s)	9, 62, 84, 335, 368, 407, 860, 1119
MspR9I	CCNGG	2 cut(s)	1120, 1873
MunI	CAATTG	1 cut(s)	1377
Mva1269I	GAATGC	1 cut(s)	145
MvaI	CCWGG	1 cut(s)	1873
NciI	CCSGG	1 cut(s)	1120
NdeII	GATC	8 cut(s)	201, 331, 745, 1141, 1234, 1746, 1830, 1851
NlaIII	CATG	5 cut(s)	670, 817, 897, 919, 1504
NlaIV	GGNNCC	5 cut(s)	747, 1117, 1254, 1563, 1860
NmuCI	GTSAC	2 cut(s)	32, 1653
NsiI	ATGCAT	1 cut(s)	1023
NspI	RCATGY	1 cut(s)	817
NspV	TTCGAA	1 cut(s)	1199
PciI	ACATGT	1 cut(s)	813
PcsI	WCGNNNNNNNCGW	1 cut(s)	290
PctI	GAATGC	1 cut(s)	145
PdmI	GAANNNNTTC	2 cut(s)	631, 1934
PfeI	GAWTC	5 cut(s)	259, 759, 1486, 1722, 1990
Pfl23II	CGTACG	1 cut(s)	372
PflFI	GACNNNGTC	2 cut(s)	922, 1862
PinAI	ACCGGT	1 cut(s)	61
PkrI	GCNGC	9 cut(s)	91, 217, 220, 223, 232, 1369, 1597, 1630, 1999
PleI	GAGTC	2 cut(s)	116, 313
PmaCI	CACGTG	1 cut(s)	1364
PmlI	CACGTG	1 cut(s)	1364
PpsI	GAGTC	2 cut(s)	116, 313
Ppu21I	YACGTR	1 cut(s)	1364
PscI	ACATGT	1 cut(s)	813
Psp1406I	AACGTT	1 cut(s)	181
Psp6I	CCWGG	1 cut(s)	1871
PspCI	CACGTG	1 cut(s)	1364
PspFI	CCCAGC	2 cut(s)	881, 986
PspGI	CCWGG	1 cut(s)	1871
PspLI	CGTACG	1 cut(s)	372
PspN4I	GGNNCC	5 cut(s)	747, 1117, 1254, 1563, 1860
PspPI	GGNCC	6 cut(s)	59, 128, 311, 1415, 1858, 2003
PstI	CTGCAG	1 cut(s)	475
PsuI	RGATCY	3 cut(s)	331, 745, 1851
PsyI	GACNNNGTC	2 cut(s)	922, 1862
RsaI	GTAC	5 cut(s)	374, 856, 976, 1117, 1505
RsaNI	GTAC	5 cut(s)	373, 855, 975, 1116, 1504
SaqAI	TTAA	4 cut(s)	296, 495, 737, 942
SatI	GCNGC	9 cut(s)	90, 216, 219, 222, 231, 1368, 1596, 1629, 1998
Sau3AI	GATC	8 cut(s)	201, 331, 745, 1141, 1234, 1746, 1830, 1851
Sau96I	GGNCC	6 cut(s)	59, 128, 311, 1415, 1858, 2003
SchI	GAGTC	2 cut(s)	117, 314
ScrFI	CCNGG	2 cut(s)	1120, 1873
SduI	GDGCHC	2 cut(s)	571, 1317
SfaNI	GCATC	9 cut(s)	57, 290, 299, 586, 1008, 1055, 1441, 1621, 1744
SfcI	CTRYAG	1 cut(s)	471
SfuI	TTCGAA	1 cut(s)	1199
SinI	GGWCC	6 cut(s)	59, 128, 311, 1415, 1858, 2003
SmlI	CTYRAG	1 cut(s)	842
SmoI	CTYRAG	1 cut(s)	842
Sse9I	AATT	2 cut(s)	700, 1377
SsiI	CCGC	5 cut(s)	105, 216, 219, 231, 338
SspMI	CTAG	4 cut(s)	783, 930, 951, 1740
StyD4I	CCNGG	2 cut(s)	1118, 1871
StyI	CCWWGG	1 cut(s)	705
TaaI	ACNGT	3 cut(s)	32, 136, 1288
TaiI	ACGT	3 cut(s)	184, 453, 1366
TaqI	TCGA	7 cut(s)	153, 645, 1199, 1241, 1752, 1833, 1938
TaqII	GACCGA	1 cut(s)	365
TasI	AATT	2 cut(s)	700, 1377
TauI	GCSGC	3 cut(s)	218, 221, 233
TfiI	GAWTC	5 cut(s)	259, 759, 1486, 1722, 1990
Tru1I	TTAA	4 cut(s)	296, 495, 737, 942
Tru9I	TTAA	4 cut(s)	296, 495, 737, 942
TscAI	CASTG	6 cut(s)	283, 430, 1018, 1522, 1531, 1690
TseFI	GTSAC	2 cut(s)	32, 1653
TseI	GCWGC	6 cut(s)	89, 221, 1367, 1595, 1628, 1997
Tsp45I	GTSAC	2 cut(s)	32, 1653
TspGWI	ACGGA	3 cut(s)	30, 51, 1997
TspRI	CASTG	6 cut(s)	283, 430, 1018, 1522, 1531, 1690
Tth111I	GACNNNGTC	2 cut(s)	922, 1862
VpaK11BI	GGWCC	6 cut(s)	59, 128, 311, 1415, 1858, 2003
XapI	RAATTY	1 cut(s)	700
XceI	RCATGY	1 cut(s)	817
XcmI	CCANNNNNNNNNTGG	2 cut(s)	122, 1514
XmiI	GTMKAC	2 cut(s)	936, 1136
XmnI	GAANNNNTTC	2 cut(s)	631, 1934
XspI	CTAG	4 cut(s)	783, 930, 951, 1740
Zsp2I	ATGCAT	1 cut(s)	1023

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.