Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002076.1

Orthogroup ID

OG0000550

Physical Location & Seq

Genomic Coordinates Forward (+)

33984 .. 40516

Gene Structure 6533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002076.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2562 bp

atggcgtctaacggtgacggagatttcagcttcgctactgggaacggcccggcggcggtgacgaacggcaacggagcggcgaggaacggactggcgaagatccatacgacgccgaagaacgggaatggggtgtgccacgacgacagctcggcgacggtgaaggctcagaccatcgaccagcttcattcgctgcagaagaagaagtcggcaccgacgacacccgtcaagggcagtcagggagactttgctgtcgctctctccgaggaggaacgccagatgcagcagctccagtccatcagtaactctctggcgtcgctgacgagagggactggaccaaaggttgtgagaggagaccctgctcagcagtctccccatcataccccgaaggtgtcatcgcaccaccatcatttcactcccacgatcagcgtcagtgacagtgccctcaagttcacccatgtcctctacaacctctctcctgctgagctatatgagcaggcgataaataatgaaaaggggtcgttcgttacgtcaacaggcgcattagcaacactttctggagccaagacaggtcggtctccaagagataaacgcgtcgtcaaggatgagaccacggaagaggagctttggtggggaaggggttcaccgaacattgaaatggacgagcacactttcatggtcaacagggaaagagctgtggattacctgaattctttggacaaggtcttcgtaaatgaccaatacttgaactgggatccagaaaacagaatcaaagtgcggattgtctctgccagggcttatcattctttgttcatgcacaacatgtgtatccgacccagtcctgaagagctggagaattttggtactccggacttcactatttacaatgctggtcagttcccgtgtaatcgttacacccactatatgacatcctccactagcatagatcttaatcttggtaggagggaaatggtcatcctcggcaccatgtatgccggggaaatgaagaaaggccttttcagtctcatgcattatctcatgcctaagcgacaaatcctatccctacattctggctgcaatatggggaaagatggagatgttgcactgttctttggattgtcaggtactgggaagacaactctgtctactgatcacaatagatacctaattggagatgatgaacactgttggactgagaatggtgtatcaaatatcgaaggtggttgctatgccaagtgtattgatctctcgagggagaaagaacctgacatttggaatgccatcaagtttggtgctgtgttggaaaatgttgtgtttgatgagcatactcgagaagtggattattctgacaaatctgttacagagaatactcgggcagcctaccccattgagtacattccaaatgcaaaaataccgtgtgttggtcctcatccgaagaatgtgatacttttggcatgtgatgcatttggtgtgcccccacctgtgagcaagttaaacctggcacagaccatgtaccatttcatcagtggctatactgcactggttgctggaactgaagagggcattaaggagccacaggcaacattctcggcttgctttggtgctgcatttataatgttgcatccaacgaagtatgcagcaatgcttgctcagaaaatgcagcagcatggtgcaactggatggctggtcaacactggctggtctggtggaaggtatggatcgggaaagcgcattaagctaccctacacccggaaaatcattgatgccatacactctggcagcctcttgaatgcaaattacaagaagactgaagtgtttggacttgagatccccagtgagattgagggagtgccttcagaaatactggatccagtgaacacttggtcggacaagaatgcataccaggaaacactcctgaagttggctggtctatttaagaacaactttgagactttcacaaactacaagattggcaaggacaacaagctgactgaagaaattctcgcagctgagctatatgagcaggctctacagcacaagaaaggtccttcatcacttgcagtggagcattggcaactctttctggagccaaaacatgtcgctcttcaatttctaaattgggatccagaaaacagaatcaaagtgcggattgtctctaccaaggcttatcatttattgttcatgcacaacatgtgcatccgccctactcctgaagagctggagaatttcattactccagacttcactatatacaatgctggtcagttccgatgtaatcgttacactcattacatgacatcctctactagcgtagacatcaaccttgctagaaaggaaatgatcatccttggtgccatatacgccggggaaatgaagaaaggtcttttcagtttaattcactatctcatgcccaaacaacacatcctctccctacattctggctgcaatatggggaaagatggagatgttgccctcttcttcggattgtcaggtatagtatcaatgcactctttggagatttggcaccggcagctgcaatgtgtttgtgacagaaatcagatatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004611 GO:0004612 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006006 GO:0006094 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016020 GO:0016036 GO:0016051 GO:0016829 GO:0016830 GO:0016831 GO:0019318 GO:0019319 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0042221 GO:0042594 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046364 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0071496 GO:0071704 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PEPCK_ATP

Protein Analysis

853

Amino Acids

95.04

Weight (kDa)

6.74

Isoelectric Point (pI)

40.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca	FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica	MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica	Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis	pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis	RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata	RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora	Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii	Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa	Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha	Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana	Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1610
AasI	GACNNNNNNGTC	3 cut(s)	248, 571, 1138
AccB1I	GGYRCC	4 cut(s)	208, 980, 2348, 2520
AccBSI	CCGCTC	1 cut(s)	77
AccI	GTMKAC	2 cut(s)	1142, 2310
AccII	CGCG	1 cut(s)	591
AccIII	TCCGGA	1 cut(s)	865
AciI	CCGC	6 cut(s)	53, 56, 77, 775, 2143, 2197
AclWI	GGATC	9 cut(s)	94, 746, 759, 1723, 1819, 1859, 1872, 2114, 2127
AcsI	RAATTY	4 cut(s)	706, 853, 1995, 2221
AcuI	CTGAAG	7 cut(s)	861, 1572, 1827, 1836, 1934, 2010, 2229
AcyI	GRCGYC	3 cut(s)	5, 110, 311
AfaI	GTAC	4 cut(s)	862, 1123, 1391, 1511
AfiI	CCNNNNNNNGG	6 cut(s)	55, 119, 227, 1418, 1746, 1918
AflIII	ACRYGT	4 cut(s)	589, 819, 2092, 2187
AgsI	TTSAA	4 cut(s)	653, 745, 1786, 2105
AjnI	CCWGG	3 cut(s)	788, 1494, 1899
Alw21I	GWGCWC	1 cut(s)	666
Alw26I	GTCTC	9 cut(s)	234, 345, 372, 579, 599, 787, 1025, 1940, 2155
AlwI	GGATC	9 cut(s)	94, 746, 759, 1723, 1819, 1859, 1872, 2114, 2127
AlwNI	CAGNNNCTG	1 cut(s)	1124
Ama87I	CYCGRG	3 cut(s)	1246, 1326, 1368
Aor13HI	TCCGGA	1 cut(s)	865
AoxI	GGCC	2 cut(s)	46, 1009
ApoI	RAATTY	4 cut(s)	706, 853, 1995, 2221
ArsI	GACNNNNNNTTYG	2 cut(s)	707, 739
Asp700I	GAANNNNTTC	2 cut(s)	637, 1995
AspLEI	GCGC	2 cut(s)	539, 1728
AspS9I	GGNCC	4 cut(s)	47, 332, 1421, 2042
AsuC2I	CCSGG	4 cut(s)	50, 994, 1747, 2362
AsuHPI	GGTGA	5 cut(s)	26, 70, 169, 442, 633
AvaI	CYCGRG	3 cut(s)	1246, 1326, 1368
AvaII	GGWCC	3 cut(s)	332, 1421, 2042
BaeGI	GKGCMC	2 cut(s)	442, 1473
BaeI	ACNNNNGTAYC	2 cut(s)	808, 841
BamHI	GGATCC	3 cut(s)	751, 1864, 2119
BanI	GGYRCC	4 cut(s)	208, 980, 2348, 2520
BbsI	GAAGAC	3 cut(s)	715, 1136, 1808
Bbv12I	GWGCWC	1 cut(s)	666
BccI	CCATC	8 cut(s)	179, 302, 381, 411, 1082, 1286, 1671, 2450
BceAI	ACGGC	2 cut(s)	61, 82
BcgI	CGANNNNNNTGC	2 cut(s)	1566, 1600
BciT130I	CCWGG	3 cut(s)	790, 1496, 1901
BciVI	GTATCC	1 cut(s)	836
BclI	TGATCA	2 cut(s)	1147, 2337
BcnI	CCSGG	4 cut(s)	50, 994, 1747, 2362
BcoDI	GTCTC	9 cut(s)	234, 345, 372, 579, 599, 787, 1025, 1940, 2155
BfaI	CTAG	3 cut(s)	936, 2304, 2325
BfmI	CTRYAG	2 cut(s)	191, 2027
BfuI	GTATCC	1 cut(s)	836
BglII	AGATCT	1 cut(s)	943
BlpI	GCTNAGC	3 cut(s)	360, 480, 2007
Bme1390I	CCNGG	7 cut(s)	50, 790, 994, 1496, 1747, 1901, 2362
Bme18I	GGWCC	3 cut(s)	332, 1421, 2042
BmeT110I	CYCGRG	3 cut(s)	1246, 1326, 1368
BmgT120I	GGNCC	4 cut(s)	47, 332, 1421, 2042
BmrFI	CCNGG	7 cut(s)	50, 790, 994, 1496, 1747, 1901, 2362
BmrI	ACTGGG	5 cut(s)	48, 757, 828, 1134, 1824
BmsI	GCATC	5 cut(s)	267, 1447, 1627, 1750, 2202
BmuI	ACTGGG	5 cut(s)	48, 757, 828, 1134, 1824
BoxI	GACNNNNGTC	1 cut(s)	221
BpiI	GAAGAC	3 cut(s)	715, 1136, 1808
BpmI	CTGGAG	6 cut(s)	272, 576, 869, 2102, 2217, 2237
Bpu10I	CCTNAGC	1 cut(s)	1041
Bpu1102I	GCTNAGC	3 cut(s)	360, 480, 2007
BpuEI	CTTGAG	2 cut(s)	428, 1841
BpuMI	CCSGG	4 cut(s)	50, 994, 1747, 2362
BsaBI	GATNNNNATC	1 cut(s)	948
BsaHI	GRCGYC	3 cut(s)	5, 110, 311
BsaI	GGTCTC	3 cut(s)	345, 579, 599
BsaJI	CCNNGG	8 cut(s)	261, 609, 789, 976, 993, 2157, 2344, 2361
BsaWI	WCCGGW	1 cut(s)	865
BsaXI	ACNNNNNCTCC	4 cut(s)	611, 641, 2408, 2438
Bsc4I	CCNNNNNNNGG	6 cut(s)	55, 119, 227, 1418, 1746, 1918
Bse118I	RCCGGY	1 cut(s)	2523
Bse3DI	GCAATG	2 cut(s)	1644, 2540
Bse8I	GATNNNNATC	1 cut(s)	948
BseAI	TCCGGA	1 cut(s)	865
BseBI	CCWGG	3 cut(s)	790, 1496, 1901
BseDI	CCNNGG	8 cut(s)	261, 609, 789, 976, 993, 2157, 2344, 2361
BseJI	GATNNNNATC	1 cut(s)	948
BseLI	CCNNNNNNNGG	6 cut(s)	55, 119, 227, 1418, 1746, 1918
BseMI	GCAATG	2 cut(s)	1644, 2540
BseMII	CTCAG	6 cut(s)	179, 374, 471, 1182, 1661, 1998
BseRI	GAGGAG	3 cut(s)	278, 363, 632
BseSI	GKGCMC	2 cut(s)	442, 1473
BsgI	GTGCAG	1 cut(s)	1518
Bsh1236I	CGCG	1 cut(s)	591
BshFI	GGCC	2 cut(s)	48, 1011
BshNI	GGYRCC	4 cut(s)	208, 980, 2348, 2520
BsiHKAI	GWGCWC	1 cut(s)	666
BsiHKCI	CYCGRG	3 cut(s)	1246, 1326, 1368
BsiSI	CCGG	6 cut(s)	50, 866, 993, 1747, 2361, 2524
BslFI	GGGAC	1 cut(s)	340
BslI	CCNNNNNNNGG	6 cut(s)	55, 119, 227, 1418, 1746, 1918
BsmAI	GTCTC	9 cut(s)	234, 345, 372, 579, 599, 787, 1025, 1940, 2155
BsmFI	GGGAC	1 cut(s)	340
BsmI	GAATGC	3 cut(s)	1279, 1792, 1897
BsnI	GGCC	2 cut(s)	48, 1011
Bso31I	GGTCTC	3 cut(s)	345, 579, 599
BsoBI	CYCGRG	3 cut(s)	1246, 1326, 1368
Bsp1286I	GDGCHC	3 cut(s)	442, 666, 1473
Bsp13I	TCCGGA	1 cut(s)	865
Bsp1720I	GCTNAGC	3 cut(s)	360, 480, 2007
BspACI	CCGC	6 cut(s)	53, 56, 77, 775, 2143, 2197
BspANI	GGCC	2 cut(s)	48, 1011
BspCNI	CTCAG	6 cut(s)	178, 373, 472, 1183, 1660, 1999
BspEI	TCCGGA	1 cut(s)	865
BspFNI	CGCG	1 cut(s)	591
BspMAI	CTGCAG	1 cut(s)	195
BspPI	GGATC	9 cut(s)	94, 746, 759, 1723, 1819, 1859, 1872, 2114, 2127
BspQI	GCTCTTC	3 cut(s)	837, 2106, 2205
BspT107I	GGYRCC	4 cut(s)	208, 980, 2348, 2520
BspTNI	GGTCTC	3 cut(s)	345, 579, 599
BsrBI	CCGCTC	1 cut(s)	77
BsrDI	GCAATG	2 cut(s)	1644, 2540
BsrFI	RCCGGY	1 cut(s)	2523
BssAI	RCCGGY	1 cut(s)	2523
BssECI	CCNNGG	8 cut(s)	261, 609, 789, 976, 993, 2157, 2344, 2361
BssNI	GRCGYC	3 cut(s)	5, 110, 311
BssT1I	CCWWGG	2 cut(s)	2157, 2344
Bst2UI	CCWGG	3 cut(s)	790, 1496, 1901
Bst4CI	ACNGT	6 cut(s)	14, 157, 437, 1104, 1184, 1413
Bst6I	CTCTTC	6 cut(s)	609, 837, 1548, 2106, 2205, 2477
BstACI	GRCGYC	3 cut(s)	5, 110, 311
BstAPI	GCANNNNNTGC	3 cut(s)	1457, 1541, 1643
BstC8I	GCNNGC	4 cut(s)	495, 1591, 1644, 2022
BstDEI	CTNAG	7 cut(s)	165, 360, 480, 1041, 1191, 1647, 2007
BstDSI	CCRYGG	1 cut(s)	609
BstFNI	CGCG	1 cut(s)	591
BstHHI	GCGC	2 cut(s)	539, 1728
BstMAI	GTCTC	9 cut(s)	234, 345, 372, 579, 599, 787, 1025, 1940, 2155
BstMWI	GCNNNNNNNGC	9 cut(s)	187, 490, 1457, 1541, 1643, 1732, 2017, 2357, 2527
BstNI	CCWGG	3 cut(s)	790, 1496, 1901
BstNSI	RCATGY	4 cut(s)	823, 1455, 2096, 2191
BstPAI	GACNNNNGTC	1 cut(s)	221
BstSCI	CCNGG	7 cut(s)	48, 788, 992, 1494, 1745, 1899, 2360
BstSFI	CTRYAG	2 cut(s)	191, 2027
BstSLI	GKGCMC	2 cut(s)	442, 1473
BstUI	CGCG	1 cut(s)	591
BstV2I	GAAGAC	3 cut(s)	715, 1136, 1808
BstX2I	RGATCY	6 cut(s)	99, 751, 943, 1824, 1864, 2119
BstYI	RGATCY	6 cut(s)	99, 751, 943, 1824, 1864, 2119
BsuI	GTATCC	1 cut(s)	836
BsuRI	GGCC	2 cut(s)	48, 1011
BtgI	CCRYGG	1 cut(s)	609
BtgZI	GCGATG	1 cut(s)	378
BtsI	GCAGTG	1 cut(s)	2064
Cac8I	GCNNGC	4 cut(s)	495, 1591, 1644, 2022
CaiI	CAGNNNCTG	1 cut(s)	1124
CfoI	GCGC	2 cut(s)	539, 1728
Cfr10I	RCCGGY	1 cut(s)	2523
Cfr13I	GGNCC	4 cut(s)	47, 332, 1421, 2042
CseI	GACGC	4 cut(s)	118, 300, 415, 580
Csp6I	GTAC	4 cut(s)	861, 1122, 1390, 1510
CviQI	GTAC	4 cut(s)	861, 1122, 1390, 1510
DdeI	CTNAG	7 cut(s)	165, 360, 480, 1041, 1191, 1647, 2007
DrdI	GACNNNNNNGTC	3 cut(s)	248, 571, 1138
DseDI	GACNNNNNNGTC	3 cut(s)	248, 571, 1138
Eam1104I	CTCTTC	6 cut(s)	609, 837, 1548, 2106, 2205, 2477
EarI	CTCTTC	6 cut(s)	609, 837, 1548, 2106, 2205, 2477
EciI	GGCGGA	1 cut(s)	2186
Eco130I	CCWWGG	2 cut(s)	2157, 2344
Eco147I	AGGCCT	1 cut(s)	1011
Eco31I	GGTCTC	3 cut(s)	345, 579, 599
Eco47I	GGWCC	3 cut(s)	332, 1421, 2042
Eco57I	CTGAAG	7 cut(s)	861, 1572, 1827, 1836, 1934, 2010, 2229
Eco88I	CYCGRG	3 cut(s)	1246, 1326, 1368
EcoO109I	RGGNCCY	1 cut(s)	2042
EcoRI	GAATTC	1 cut(s)	706
EcoRII	CCWGG	3 cut(s)	788, 1494, 1899
EcoT14I	CCWWGG	2 cut(s)	2157, 2344
EcoT22I	ATGCAT	3 cut(s)	1029, 1462, 1897
ErhI	CCWWGG	2 cut(s)	2157, 2344
FalI	AAGNNNNNCTT	4 cut(s)	606, 638, 1925, 1957
FaqI	GGGAC	1 cut(s)	340
FbaI	TGATCA	2 cut(s)	1147, 2337
FblI	GTMKAC	2 cut(s)	1142, 2310
FspBI	CTAG	3 cut(s)	936, 2304, 2325
GlaI	GCGC	2 cut(s)	538, 1727
GsuI	CTGGAG	6 cut(s)	272, 576, 869, 2102, 2217, 2237
HaeIII	GGCC	2 cut(s)	48, 1011
HapII	CCGG	6 cut(s)	50, 866, 993, 1747, 2361, 2524
HgaI	GACGC	4 cut(s)	118, 300, 415, 580
HhaI	GCGC	2 cut(s)	539, 1728
Hin1I	GRCGYC	3 cut(s)	5, 110, 311
Hin6I	GCGC	2 cut(s)	537, 1726
HinP1I	GCGC	2 cut(s)	537, 1726
HincII	GTYRAC	3 cut(s)	531, 679, 1687
HindII	GTYRAC	3 cut(s)	531, 679, 1687
HinfI	GANTC	2 cut(s)	765, 2133
HpaII	CCGG	6 cut(s)	50, 866, 993, 1747, 2361, 2524
HphI	GGTGA	5 cut(s)	26, 70, 169, 442, 633
Hpy166II	GTNNAC	8 cut(s)	450, 531, 641, 679, 1143, 1687, 1873, 2311
Hpy8I	GTNNAC	8 cut(s)	450, 531, 641, 679, 1143, 1687, 1873, 2311
Hpy99I	CGWCG	6 cut(s)	112, 143, 157, 217, 316, 596
HpyAV	CCTTC	7 cut(s)	154, 379, 627, 1208, 1701, 1860, 2055
HpyCH4III	ACNGT	6 cut(s)	14, 157, 437, 1104, 1184, 1413
HpyCH4IV	ACGT	1 cut(s)	527
HpyF10VI	GCNNNNNNNGC	9 cut(s)	187, 490, 1457, 1541, 1643, 1732, 2017, 2357, 2527
HpyF3I	CTNAG	7 cut(s)	165, 360, 480, 1041, 1191, 1647, 2007
HpySE526I	ACGT	1 cut(s)	527
Hsp92I	GRCGYC	3 cut(s)	5, 110, 311
HspAI	GCGC	2 cut(s)	537, 1726
Kpn2I	TCCGGA	1 cut(s)	865
Ksp22I	TGATCA	2 cut(s)	1147, 2337
LguI	GCTCTTC	3 cut(s)	837, 2106, 2205
LmnI	GCTCC	7 cut(s)	74, 291, 557, 619, 1567, 2062, 2083
LweI	GCATC	5 cut(s)	267, 1447, 1627, 1750, 2202
MaeI	CTAG	3 cut(s)	936, 2304, 2325
MaeII	ACGT	1 cut(s)	527
MaeIII	GTNAC	9 cut(s)	14, 58, 299, 431, 523, 908, 1354, 2276, 2543
MbiI	CCGCTC	1 cut(s)	77
MflI	RGATCY	6 cut(s)	99, 751, 943, 1824, 1864, 2119
MhlI	GDGCHC	3 cut(s)	442, 666, 1473
MluCI	AATT	9 cut(s)	706, 853, 1164, 1792, 1995, 2105, 2113, 2221, 2391
MluI	ACGCGT	1 cut(s)	589
MmeI	TCCRAC	5 cut(s)	853, 1166, 1278, 1646, 1863
Mph1103I	ATGCAT	3 cut(s)	1029, 1462, 1897
MroI	TCCGGA	1 cut(s)	865
MroXI	GAANNNNTTC	2 cut(s)	637, 1995
MseI	TTAA	6 cut(s)	948, 1490, 1563, 1731, 1932, 2390
MslI	CAYNNNNRTG	2 cut(s)	653, 671
MspA1I	CMGCKG	2 cut(s)	2006, 2530
MspI	CCGG	6 cut(s)	50, 866, 993, 1747, 2361, 2524
MspR9I	CCNGG	7 cut(s)	50, 790, 994, 1496, 1747, 1901, 2362
Mva1269I	GAATGC	3 cut(s)	1279, 1792, 1897
MvaI	CCWGG	3 cut(s)	790, 1496, 1901
MvnI	CGCG	1 cut(s)	591
MwoI	GCNNNNNNNGC	9 cut(s)	187, 490, 1457, 1541, 1643, 1732, 2017, 2357, 2527
NciI	CCSGG	4 cut(s)	50, 994, 1747, 2362
NmeAIII	GCCGAG	3 cut(s)	128, 957, 1565
NmuCI	GTSAC	4 cut(s)	14, 58, 431, 2543
NsiI	ATGCAT	3 cut(s)	1029, 1462, 1897
NspI	RCATGY	4 cut(s)	823, 1455, 2096, 2191
PaeR7I	CTCGAG	2 cut(s)	1246, 1326
PceI	AGGCCT	1 cut(s)	1011
PciI	ACATGT	3 cut(s)	819, 2092, 2187
PciSI	GCTCTTC	3 cut(s)	837, 2106, 2205
PcsI	WCGNNNNNNNCGW	3 cut(s)	212, 258, 524
PctI	GAATGC	3 cut(s)	1279, 1792, 1897
PdmI	GAANNNNTTC	2 cut(s)	637, 1995
PfeI	GAWTC	2 cut(s)	765, 2133
PflFI	GACNNNGTC	2 cut(s)	719, 834
PpuMI	RGGWCCY	1 cut(s)	2042
PscI	ACATGT	3 cut(s)	819, 2092, 2187
PshAI	GACNNNNGTC	1 cut(s)	221
PsiI	TTATAA	1 cut(s)	1610
Psp5II	RGGWCCY	1 cut(s)	2042
Psp6I	CCWGG	3 cut(s)	788, 1494, 1899
PspGI	CCWGG	3 cut(s)	788, 1494, 1899
PspPI	GGNCC	4 cut(s)	47, 332, 1421, 2042
PspPPI	RGGWCCY	1 cut(s)	2042
PstI	CTGCAG	1 cut(s)	195
PstNI	CAGNNNCTG	1 cut(s)	1124
PsuI	RGATCY	6 cut(s)	99, 751, 943, 1824, 1864, 2119
PsyI	GACNNNGTC	2 cut(s)	719, 834
PvuII	CAGCTG	2 cut(s)	2006, 2530
RsaI	GTAC	4 cut(s)	862, 1123, 1391, 1511
RsaNI	GTAC	4 cut(s)	861, 1122, 1390, 1510
RseI	CAYNNNNRTG	2 cut(s)	653, 671
SapI	GCTCTTC	3 cut(s)	837, 2106, 2205
SaqAI	TTAA	6 cut(s)	948, 1490, 1563, 1731, 1932, 2390
Sau96I	GGNCC	4 cut(s)	47, 332, 1421, 2042
ScrFI	CCNGG	7 cut(s)	50, 790, 994, 1496, 1747, 1901, 2362
SduI	GDGCHC	3 cut(s)	442, 666, 1473
SfaNI	GCATC	5 cut(s)	267, 1447, 1627, 1750, 2202
SfcI	CTRYAG	2 cut(s)	191, 2027
Sfr274I	CTCGAG	2 cut(s)	1246, 1326
SinI	GGWCC	3 cut(s)	332, 1421, 2042
SlaI	CTCGAG	2 cut(s)	1246, 1326
SmiMI	CAYNNNNRTG	2 cut(s)	653, 671
SmlI	CTYRAG	4 cut(s)	443, 1246, 1326, 1820
SmoI	CTYRAG	4 cut(s)	443, 1246, 1326, 1820
Sse9I	AATT	9 cut(s)	706, 853, 1164, 1792, 1995, 2105, 2113, 2221, 2391
SseBI	AGGCCT	1 cut(s)	1011
SsiI	CCGC	6 cut(s)	53, 56, 77, 775, 2143, 2197
SspMI	CTAG	3 cut(s)	936, 2304, 2325
StuI	AGGCCT	1 cut(s)	1011
StyD4I	CCNGG	7 cut(s)	48, 788, 992, 1494, 1745, 1899, 2360
StyI	CCWWGG	2 cut(s)	2157, 2344
TaaI	ACNGT	6 cut(s)	14, 157, 437, 1104, 1184, 1413
TaiI	ACGT	1 cut(s)	530
TaqI	TCGA	4 cut(s)	174, 1212, 1247, 1327
TaqII	GACCGA	1 cut(s)	561
TasI	AATT	9 cut(s)	706, 853, 1164, 1792, 1995, 2105, 2113, 2221, 2391
TatI	WGTACW	1 cut(s)	1389
TauI	GCSGC	2 cut(s)	56, 80
TfiI	GAWTC	2 cut(s)	765, 2133
Tru1I	TTAA	6 cut(s)	948, 1490, 1563, 1731, 1932, 2390
Tru9I	TTAA	6 cut(s)	948, 1490, 1563, 1731, 1932, 2390
TseFI	GTSAC	4 cut(s)	14, 58, 431, 2543
Tsp45I	GTSAC	4 cut(s)	14, 58, 431, 2543
TspGWI	ACGGA	4 cut(s)	33, 87, 102, 626
Tth111I	GACNNNGTC	2 cut(s)	719, 834
VpaK11BI	GGWCC	3 cut(s)	332, 1421, 2042
XapI	RAATTY	4 cut(s)	706, 853, 1995, 2221
XceI	RCATGY	4 cut(s)	823, 1455, 2096, 2191
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1520, 1875
XhoI	CTCGAG	2 cut(s)	1246, 1326
XmiI	GTMKAC	2 cut(s)	1142, 2310
XmnI	GAANNNNTTC	2 cut(s)	637, 1995
XspI	CTAG	3 cut(s)	936, 2304, 2325
Zsp2I	ATGCAT	3 cut(s)	1029, 1462, 1897

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.