Rw1G004970

Phosphoenolpyruvate carboxykinase ATP

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
9499397 .. 9504397
5001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G004970.1

Sequence Viewer

Length: 1533 bp
ATGAAAGAGAGTAGTGTTGGATTGGTGATGAATAAGAGTAGTTTGCTCAAGACGGTAAACAATGAAAATGTCTATAACTATCATTCTGGATACCACAAAAGAAGTGAGTCGGTTATTGTCAACGAAAATGTAAATTGCTCAATTGTGGTTGTTCGATTAGTACGCTATGATAATGTGAGGTTACTCATTAGTTTGAATTTATTTCAAAGGACTCGAGCGTGTGCACATGGAATTGGACGAAGTATCCAAAGTCGGGAACGAACCCGAATGTGGACGAACACTCCATATCCAGGTAGGGTGAGCTCACGAGAAAGGTCCTTCATCACTTGCAGTGGCGCATTGGCAACTCTTTCTGGAGCCAAAATAGGTCAGTGTCCAAGGGACAAACGTGTTCAAACTTTCATGGTCAACAGAGAAAGAGCTGTGGATTACTTGAATTCTTTGGACAAGGTTATATTGTTAATGTTATTGTCAAATTCTCTTCAATTTCTAAATTGGGATCCAGAAAACAGAAGCAAAGTGCGAATTGTCTCTACCAGGCCTTATCATTTATTGTTCATGCACAACATGTGCATCCGACTTACTCCTGAAGAGCTGGAGAATTTCGGTACTCCAGACTTCACTATATACAATGCCGGTCAGTTCCCGTGTAATCGTTACACTCATTACATGACATCCTCTACTAGCGTAGACATCAACCTTGCTAGCAAGGAAATGGTCATCCTTGGCGCCATGTATGCCAGGAAAATGAAGAAAGGTCTTTTCAGTTTAATGCATTATCTCATGCCTAAATCACACATCCTCTCCCTACATTCTGGTTGCAATATGCGGAAAGATGGAGATGTTGCCCTCTTCTTCGGATTGTCAGGCACCGAAAAAACGACTCTATCTACATATCACAATTGGAACTTAATTGGTGATGATGAACACTGTTGGAATGAGAATGGTTGCATTGATCTCTCCAGGGAGAAAGAGCGCGACATCTGGAATGCCATCAAGTTTGGCTCTGTGGTGGAAAATGTCACATTCGACGAGCATACCCGAGAGGTGGATTACAGTGACAAATCTATTACCGAGAATTCTCGAGCAGCGTATCCCATTGAGTACATTCCCAATGCAAAGATACCATGTGTTGGCCATCATCCAAAGAATGTGATACTTTTGGCATGTGATGCATTTGGTGTACTCCCACCTGGTGTCAATGAGCCACGGGCAACATTCTCGGCTTGCTCTGGTGCAGCATTTTTAATGTTGCATCCTACCAAGTATGCAGCAATGCTGGCTGAGAAGATGCAGAAGCATGGTGCAACTGCATGGCTGGTCAACACTGGTTGGTCTGGTGGAAGCTATGGATCAGGAAGCCGCATTAAGCTTGCCTACACTCGGAAAATTACCGATGGCATACACTATACAATCCCCACCGAGGTTGAGGGAGTCTGGCTAGACTATTTCACGACCAACTTTGAGACTTTCACAGACTGCAAGATTGGCAACGACAATAACCTGACAGAAGACCTCCTTGCAGCTGCTTGA

Protein Analysis

510

Amino Acids

57.62

Weight (kDa)

8.65

Isoelectric Point (pI)

36.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PEPCK_ATP PF01293 132 - 398 1.6e-92 Phosphoenolpyruvate carboxykinase
PEPCK_ATP PF01293 399 - 470 1.1e-28 Phosphoenolpyruvate carboxykinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000550)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 728, 869
AccB7I CCANNNNNTGG 1 cut(s) 1133
AccI GTMKAC 1 cut(s) 690
AccII CGCG 1 cut(s) 978
AciI CCGC 2 cut(s) 829, 1363
AclWI GGATC 3 cut(s) 494, 507, 1360
AcoI YGGCCR 1 cut(s) 1135
AcsI RAATTY 5 cut(s) 196, 436, 475, 601, 1078
AcuI CTGAAG 1 cut(s) 609
AcyI GRCGYC 1 cut(s) 729
AdeI CACNNNGTG 1 cut(s) 1196
AfaI GTAC 4 cut(s) 162, 610, 1106, 1185
AfiI CCNNNNNNNGG 7 cut(s) 253, 270, 290, 1048, 1133, 1383, 1423
AflIII ACRYGT 2 cut(s) 388, 567
AgsI TTSAA 5 cut(s) 196, 206, 395, 436, 485
AjnI CCWGG 5 cut(s) 289, 536, 740, 962, 1192
AluBI AGCT 6 cut(s) 303, 422, 595, 1347, 1372, 1526
AluI AGCT 6 cut(s) 303, 422, 595, 1347, 1372, 1526
Alw21I GWGCWC 2 cut(s) 226, 305
Alw26I GTCTC 2 cut(s) 535, 1460
Alw44I GTGCAC 1 cut(s) 222
AlwI GGATC 3 cut(s) 494, 507, 1360
Ama87I CYCGRG 3 cut(s) 213, 1041, 1083
AoxI GGCC 2 cut(s) 539, 1135
ApaLI GTGCAC 1 cut(s) 222
ApeKI GCWGC 5 cut(s) 1088, 1238, 1271, 1523, 1526
ApoI RAATTY 5 cut(s) 196, 436, 475, 601, 1078
AspLEI GCGC 3 cut(s) 338, 731, 978
AspS9I GGNCC 1 cut(s) 315
AsuHPI GGTGA 3 cut(s) 37, 310, 929
AsuNHI GCTAGC 1 cut(s) 704
AvaI CYCGRG 3 cut(s) 213, 1041, 1083
AvaII GGWCC 1 cut(s) 315
BaeGI GKGCMC 1 cut(s) 226
BalI TGGCCA 1 cut(s) 1137
BamHI GGATCC 1 cut(s) 499
BanI GGYRCC 2 cut(s) 728, 869
BanII GRGCYC 1 cut(s) 305
BauI CACGAG 1 cut(s) 306
BbsI GAAGAC 1 cut(s) 1518
Bbv12I GWGCWC 2 cut(s) 226, 305
BbvI GCAGC 4 cut(s) 1100, 1250, 1283, 1513
BccI CCATC 4 cut(s) 830, 1001, 1146, 1391
BcgI CGANNNNNNTGC 2 cut(s) 1203, 1237
BciT130I CCWGG 5 cut(s) 291, 538, 742, 964, 1194
BciVI GTATCC 3 cut(s) 83, 254, 1104
BcoDI GTCTC 2 cut(s) 535, 1460
BfaI CTAG 3 cut(s) 684, 705, 1442
BfoI RGCGCY 1 cut(s) 732
BfuI GTATCC 3 cut(s) 83, 254, 1104
BisI GCNGC 6 cut(s) 1089, 1239, 1272, 1363, 1524, 1527
BlsI GCNGC 6 cut(s) 1090, 1240, 1273, 1364, 1525, 1528
Bme1390I CCNGG 5 cut(s) 291, 538, 742, 964, 1194
Bme18I GGWCC 1 cut(s) 315
BmeT110I CYCGRG 3 cut(s) 213, 1041, 1083
BmgT120I GGNCC 1 cut(s) 315
BmiI GGNNCC 4 cut(s) 358, 501, 730, 871
BmrFI CCNGG 5 cut(s) 291, 538, 742, 964, 1194
BmsI GCATC 4 cut(s) 582, 1162, 1264, 1281
BmtI GCTAGC 1 cut(s) 708
BpiI GAAGAC 1 cut(s) 1518
BpmI CTGGAG 4 cut(s) 375, 597, 617, 946
BpuEI CTTGAG 1 cut(s) 32
BsaHI GRCGYC 1 cut(s) 729
BsaJI CCNNGG 5 cut(s) 377, 724, 963, 1208, 1422
BsaXI ACNNNNNCTCC 4 cut(s) 265, 295, 788, 818
Bsc4I CCNNNNNNNGG 7 cut(s) 253, 270, 290, 1048, 1133, 1383, 1423
Bse118I RCCGGY 1 cut(s) 635
Bse1I ACTGG 1 cut(s) 1333
Bse3DI GCAATG 1 cut(s) 1281
BseBI CCWGG 5 cut(s) 291, 538, 742, 964, 1194
BseDI CCNNGG 5 cut(s) 377, 724, 963, 1208, 1422
BseGI GGATG 6 cut(s) 573, 674, 720, 798, 1141, 1255
BseLI CCNNNNNNNGG 7 cut(s) 253, 270, 290, 1048, 1133, 1383, 1423
BseMI GCAATG 1 cut(s) 1281
BseMII CTCAG 1 cut(s) 1275
BseNI ACTGG 1 cut(s) 1333
BseSI GKGCMC 1 cut(s) 226
BseXI GCAGC 4 cut(s) 1100, 1250, 1283, 1513
BsgI GTGCAG 1 cut(s) 1257
Bsh1236I CGCG 1 cut(s) 978
BshFI GGCC 2 cut(s) 541, 1137
BshNI GGYRCC 2 cut(s) 728, 869
BsiHKAI GWGCWC 2 cut(s) 226, 305
BsiHKCI CYCGRG 3 cut(s) 213, 1041, 1083
BsiSI CCGG 1 cut(s) 636
BslFI GGGAC 1 cut(s) 395
BslI CCNNNNNNNGG 7 cut(s) 253, 270, 290, 1048, 1133, 1383, 1423
BsmAI GTCTC 2 cut(s) 535, 1460
BsmFI GGGAC 1 cut(s) 395
BsmI GAATGC 1 cut(s) 994
BsnI GGCC 2 cut(s) 541, 1137
BsoBI CYCGRG 3 cut(s) 213, 1041, 1083
Bsp1286I GDGCHC 2 cut(s) 226, 305
Bsp143I GATC 3 cut(s) 499, 955, 1352
BspACI CCGC 2 cut(s) 829, 1363
BspANI GGCC 2 cut(s) 541, 1137
BspCNI CTCAG 1 cut(s) 1276
BspFNI CGCG 1 cut(s) 978
BspLI GGNNCC 4 cut(s) 358, 501, 730, 871
BspOI GCTAGC 1 cut(s) 708
BspPI GGATC 3 cut(s) 494, 507, 1360
BspQI GCTCTTC 1 cut(s) 585
BspT107I GGYRCC 2 cut(s) 728, 869
BsrDI GCAATG 1 cut(s) 1281
BsrFI RCCGGY 1 cut(s) 635
BsrI ACTGG 1 cut(s) 1333
BssAI RCCGGY 1 cut(s) 635
BssECI CCNNGG 5 cut(s) 377, 724, 963, 1208, 1422
BssMI GATC 3 cut(s) 499, 955, 1352
BssNI GRCGYC 1 cut(s) 729
BssSI CACGAG 1 cut(s) 306
BssT1I CCWWGG 2 cut(s) 377, 724
Bst2BI CACGAG 1 cut(s) 306
Bst2UI CCWGG 5 cut(s) 291, 538, 742, 964, 1194
Bst4CI ACNGT 3 cut(s) 55, 932, 1058
Bst6I CTCTTC 3 cut(s) 486, 585, 857
BstACI GRCGYC 1 cut(s) 729
BstAPI GCANNNNNTGC 1 cut(s) 1172
BstC8I GCNNGC 4 cut(s) 706, 1228, 1281, 1374
BstDEI CTNAG 1 cut(s) 1284
BstDSI CCRYGG 1 cut(s) 1208
BstF5I GGATG 6 cut(s) 573, 674, 720, 798, 1141, 1255
BstFNI CGCG 1 cut(s) 978
BstH2I RGCGCY 1 cut(s) 732
BstHHI GCGC 3 cut(s) 338, 731, 978
BstKTI GATC 3 cut(s) 502, 958, 1355
BstMAI GTCTC 2 cut(s) 535, 1460
BstMBI GATC 3 cut(s) 499, 955, 1352
BstMWI GCNNNNNNNGC 4 cut(s) 737, 1172, 1280, 1488
BstNI CCWGG 5 cut(s) 291, 538, 742, 964, 1194
BstNSI RCATGY 2 cut(s) 571, 1170
BstSCI CCNGG 5 cut(s) 289, 536, 740, 962, 1192
BstSLI GKGCMC 1 cut(s) 226
BstUI CGCG 1 cut(s) 978
BstV1I GCAGC 4 cut(s) 1100, 1250, 1283, 1513
BstV2I GAAGAC 1 cut(s) 1518
BstX2I RGATCY 1 cut(s) 499
BstYI RGATCY 1 cut(s) 499
BsuI GTATCC 3 cut(s) 83, 254, 1104
BsuRI GGCC 2 cut(s) 541, 1137
BtgI CCRYGG 1 cut(s) 1208
BtsCI GGATG 6 cut(s) 573, 674, 720, 798, 1141, 1255
BtsI GCAGTG 1 cut(s) 337
BtsIMutI CAGTG 5 cut(s) 337, 377, 928, 1063, 1326
Cac8I GCNNGC 4 cut(s) 706, 1228, 1281, 1374
CfoI GCGC 3 cut(s) 338, 731, 978
Cfr10I RCCGGY 1 cut(s) 635
Cfr13I GGNCC 1 cut(s) 315
CsiI ACCWGGT 1 cut(s) 1192
Csp6I GTAC 4 cut(s) 161, 609, 1105, 1184
CspCI CAANNNNNGTGG 2 cut(s) 1408, 1443
CviQI GTAC 4 cut(s) 161, 609, 1105, 1184
DdeI CTNAG 1 cut(s) 1284
DinI GGCGCC 1 cut(s) 730
DpnI GATC 3 cut(s) 501, 957, 1354
DpnII GATC 3 cut(s) 499, 955, 1352
DraIII CACNNNGTG 1 cut(s) 1196
EaeI YGGCCR 1 cut(s) 1135
Eam1104I CTCTTC 3 cut(s) 486, 585, 857
EarI CTCTTC 3 cut(s) 486, 585, 857
Ecl136II GAGCTC 1 cut(s) 303
Eco130I CCWWGG 2 cut(s) 377, 724
Eco147I AGGCCT 1 cut(s) 541
Eco24I GRGCYC 1 cut(s) 305
Eco47I GGWCC 1 cut(s) 315
Eco53kI GAGCTC 1 cut(s) 303
Eco57I CTGAAG 1 cut(s) 609
Eco88I CYCGRG 3 cut(s) 213, 1041, 1083
EcoICRI GAGCTC 1 cut(s) 303
EcoO109I RGGNCCY 1 cut(s) 315
EcoRI GAATTC 2 cut(s) 436, 1078
EcoRII CCWGG 5 cut(s) 289, 536, 740, 962, 1192
EcoT14I CCWWGG 2 cut(s) 377, 724
EcoT22I ATGCAT 2 cut(s) 777, 1177
EcoT38I GRGCYC 1 cut(s) 305
EgeI GGCGCC 1 cut(s) 730
EheI GGCGCC 1 cut(s) 730
ErhI CCWWGG 2 cut(s) 377, 724
FalI AAGNNNNNCTT 1 cut(s) 1503
FaqI GGGAC 1 cut(s) 395
FblI GTMKAC 1 cut(s) 690
Fnu4HI GCNGC 6 cut(s) 1089, 1239, 1272, 1363, 1524, 1527
FokI GGATG 6 cut(s) 560, 661, 707, 785, 1128, 1242
FriOI GRGCYC 1 cut(s) 305
Fsp4HI GCNGC 6 cut(s) 1089, 1239, 1272, 1363, 1524, 1527
FspBI CTAG 3 cut(s) 684, 705, 1442
GlaI GCGC 3 cut(s) 337, 730, 977
GluI GCNGC 6 cut(s) 1089, 1239, 1272, 1363, 1524, 1527
GsuI CTGGAG 4 cut(s) 375, 597, 617, 946
HaeII RGCGCY 1 cut(s) 732
HaeIII GGCC 2 cut(s) 541, 1137
HapII CCGG 1 cut(s) 636
HhaI GCGC 3 cut(s) 338, 731, 978
Hin1I GRCGYC 1 cut(s) 729
Hin6I GCGC 3 cut(s) 336, 729, 976
HinP1I GCGC 3 cut(s) 336, 729, 976
HincII GTYRAC 3 cut(s) 121, 409, 1324
HindII GTYRAC 3 cut(s) 121, 409, 1324
HindIII AAGCTT 1 cut(s) 1370
HinfI GANTC 4 cut(s) 107, 211, 883, 1434
HpaII CCGG 1 cut(s) 636
HphI GGTGA 3 cut(s) 37, 310, 929
Hpy166II GTNNAC 8 cut(s) 58, 121, 224, 273, 409, 691, 1184, 1324
Hpy188I TCNGA 3 cut(s) 578, 860, 1386
Hpy8I GTNNAC 8 cut(s) 58, 121, 224, 273, 409, 691, 1184, 1324
Hpy99I CGWCG 1 cut(s) 1034
HpyAV CCTTC 1 cut(s) 328
HpyCH4III ACNGT 3 cut(s) 55, 932, 1058
HpyCH4IV ACGT 1 cut(s) 388
HpyF10VI GCNNNNNNNGC 4 cut(s) 737, 1172, 1280, 1488
HpyF3I CTNAG 1 cut(s) 1284
HpySE526I ACGT 1 cut(s) 388
Hsp92I GRCGYC 1 cut(s) 729
HspAI GCGC 3 cut(s) 336, 729, 976
KasI GGCGCC 1 cut(s) 728
Kzo9I GATC 3 cut(s) 499, 955, 1352
LguI GCTCTTC 1 cut(s) 585
LmnI GCTCC 1 cut(s) 356
Lsp1109I GCAGC 4 cut(s) 1100, 1250, 1283, 1513
LweI GCATC 4 cut(s) 582, 1162, 1264, 1281
MabI ACCWGGT 1 cut(s) 1192
MaeI CTAG 3 cut(s) 684, 705, 1442
MaeII ACGT 1 cut(s) 388
MaeIII GTNAC 4 cut(s) 180, 656, 1021, 1058
MalI GATC 3 cut(s) 501, 957, 1354
MboI GATC 3 cut(s) 499, 955, 1352
MboII GAAGA 7 cut(s) 473, 602, 763, 844, 847, 1300, 1523
MfeI CAATTG 2 cut(s) 141, 901
MflI RGATCY 1 cut(s) 499
MhlI GDGCHC 2 cut(s) 226, 305
MlsI TGGCCA 1 cut(s) 1137
MluNI TGGCCA 1 cut(s) 1137
Mly113I GGCGCC 1 cut(s) 729
MlyI GAGTC 4 cut(s) 116, 205, 877, 1443
MmeI TCCRAC 2 cut(s) 601, 914
MnlI CCTC 8 cut(s) 171, 688, 812, 860, 1039, 1417, 1423, 1526
Mox20I TGGCCA 1 cut(s) 1137
Mph1103I ATGCAT 2 cut(s) 777, 1177
MscI TGGCCA 1 cut(s) 1137
MseI TTAA 5 cut(s) 461, 770, 911, 1247, 1368
Msp20I TGGCCA 1 cut(s) 1137
MspA1I CMGCKG 1 cut(s) 1526
MspI CCGG 1 cut(s) 636
MspR9I CCNGG 5 cut(s) 291, 538, 742, 964, 1194
MunI CAATTG 2 cut(s) 141, 901
Mva1269I GAATGC 1 cut(s) 994
MvaI CCWGG 5 cut(s) 291, 538, 742, 964, 1194
MvnI CGCG 1 cut(s) 978
MwoI GCNNNNNNNGC 4 cut(s) 737, 1172, 1280, 1488
NarI GGCGCC 1 cut(s) 729
NdeII GATC 3 cut(s) 499, 955, 1352
NheI GCTAGC 1 cut(s) 704
NlaIV GGNNCC 4 cut(s) 358, 501, 730, 871
NmeAIII GCCGAG 1 cut(s) 1202
NmuCI GTSAC 2 cut(s) 1021, 1058
NsiI ATGCAT 2 cut(s) 777, 1177
NspI RCATGY 2 cut(s) 571, 1170
PaeR7I CTCGAG 2 cut(s) 213, 1083
PceI AGGCCT 1 cut(s) 541
PciI ACATGT 1 cut(s) 567
PciSI GCTCTTC 1 cut(s) 585
PctI GAATGC 1 cut(s) 994
PflMI CCANNNNNTGG 1 cut(s) 1133
PkrI GCNGC 6 cut(s) 1090, 1240, 1273, 1364, 1525, 1528
PleI GAGTC 4 cut(s) 115, 205, 877, 1442
PluTI GGCGCC 1 cut(s) 732
PpsI GAGTC 4 cut(s) 115, 205, 877, 1442
PpuMI RGGWCCY 1 cut(s) 315
PscI ACATGT 1 cut(s) 567
Psp124BI GAGCTC 1 cut(s) 305
Psp5II RGGWCCY 1 cut(s) 315
Psp6I CCWGG 5 cut(s) 289, 536, 740, 962, 1192
PspGI CCWGG 5 cut(s) 289, 536, 740, 962, 1192
PspN4I GGNNCC 4 cut(s) 358, 501, 730, 871
PspPI GGNCC 1 cut(s) 315
PspPPI RGGWCCY 1 cut(s) 315
PspXI VCTCGAGB 1 cut(s) 213
PsuI RGATCY 1 cut(s) 499
PvuII CAGCTG 1 cut(s) 1526
RsaI GTAC 4 cut(s) 162, 610, 1106, 1185
RsaNI GTAC 4 cut(s) 161, 609, 1105, 1184
SacI GAGCTC 1 cut(s) 305
SapI GCTCTTC 1 cut(s) 585
SaqAI TTAA 5 cut(s) 461, 770, 911, 1247, 1368
SatI GCNGC 6 cut(s) 1089, 1239, 1272, 1363, 1524, 1527
Sau3AI GATC 3 cut(s) 499, 955, 1352
Sau96I GGNCC 1 cut(s) 315
SchI GAGTC 4 cut(s) 116, 205, 877, 1443
ScrFI CCNGG 5 cut(s) 291, 538, 742, 964, 1194
SduI GDGCHC 2 cut(s) 226, 305
SexAI ACCWGGT 1 cut(s) 1192
SfaNI GCATC 4 cut(s) 582, 1162, 1264, 1281
SfoI GGCGCC 1 cut(s) 730
Sfr274I CTCGAG 2 cut(s) 213, 1083
SinI GGWCC 1 cut(s) 315
SlaI CTCGAG 2 cut(s) 213, 1083
SmlI CTYRAG 3 cut(s) 47, 213, 1083
SmoI CTYRAG 3 cut(s) 47, 213, 1083
SseBI AGGCCT 1 cut(s) 541
SsiI CCGC 2 cut(s) 829, 1363
SspDI GGCGCC 1 cut(s) 728
SspMI CTAG 3 cut(s) 684, 705, 1442
SstI GAGCTC 1 cut(s) 305
StuI AGGCCT 1 cut(s) 541
StyD4I CCNGG 5 cut(s) 289, 536, 740, 962, 1192
StyI CCWWGG 2 cut(s) 377, 724
TaaI ACNGT 3 cut(s) 55, 932, 1058
TaiI ACGT 1 cut(s) 391
TaqI TCGA 4 cut(s) 154, 214, 1029, 1084
TatI WGTACW 2 cut(s) 1104, 1183
TauI GCSGC 1 cut(s) 1365
Tru1I TTAA 5 cut(s) 461, 770, 911, 1247, 1368
Tru9I TTAA 5 cut(s) 461, 770, 911, 1247, 1368
TscAI CASTG 5 cut(s) 337, 377, 935, 1063, 1333
TseFI GTSAC 2 cut(s) 1021, 1058
TseI GCWGC 5 cut(s) 1088, 1238, 1271, 1523, 1526
Tsp45I GTSAC 2 cut(s) 1021, 1058
TspDTI ATGAA 8 cut(s) 17, 44, 78, 310, 391, 547, 764, 939
TspRI CASTG 5 cut(s) 337, 377, 935, 1063, 1333
Van91I CCANNNNNTGG 1 cut(s) 1133
VneI GTGCAC 1 cut(s) 222
VpaK11BI GGWCC 1 cut(s) 315
XapI RAATTY 5 cut(s) 196, 436, 475, 601, 1078
XceI RCATGY 2 cut(s) 571, 1170
XhoI CTCGAG 2 cut(s) 213, 1083
XmiI GTMKAC 1 cut(s) 690
XspI CTAG 3 cut(s) 684, 705, 1442
Zsp2I ATGCAT 2 cut(s) 777, 1177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.