Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000550

Physical Location & Seq

Genomic Coordinates Forward (+)

21946438 .. 21950181

Gene Structure 3744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G211000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGAACTCTCTTCACGTGTCATTCAAGACACCATGCAATTCACCTTCTCCACATATTTTATCCATTTCATTTTTTACCTCAATTTAATCTTTGACCATAATTTCGCATGCATGAGCCACTATAAAAGCTTAATTAATCGTACGTTCAATCTCTCGAATAAAAAAAATGGAAATAAAAGGAGATTGAACGCCCTGTCAAACCAAAAACTATCTTTTGCTGCTCTTTGTGCTCTTCATTTTAAGATACCCACCAAGAAAATGGCTTTCGGTGAGACTGAGACCCAACCACAGACACAGACACCCGAGGTCGTTCAGGCTAAGAAGTATGACCAGAACGATGTTGATAAAGTGTCACATTTCACCCCCACTATTTGCGTCAGTGACAGCGCCTTAAAGTTCACCAACGTCCTCTACAACCTTACTCCTGCTGAGCTGTATGAGCATGCTGTCAAGTACGAGAAGGGGTCGTTCATCACGTCCACCGGCGCATTAGCAACTCGATCGGGAGCCAAGACTGGTCGGTCTCCAAGAGATAAGCGTGTTGTCAAGGACGCTACTACTCAGGATGATCTTTGGTGGGGAAAGGGTTCCCCCAACATCGAAATGGACGAGCACACGTTCATGATTAACAGGGAAAGAGCTGTAGATTACTTAAATTGTTTAGACAAGATCTTTGTGAATGACCAATTTCTGAACTGGGATTCAGAAAACAAAATTAAAGTGAGGATTGTCTCTGCTAGGGCTTACCACTCACTGTTCATGCACAACATGTGCATCCGACCCACTGAAGAAGAGCTGGAGAATTTCGGCACTCCGGACTTCACTATCTACAATGCTGGCAAGTTCCCCTGCAACCGTTACACACACTACATGACATCCTCTACTAGCGTTGATCTCCATATTGCTAGGAAGGAGATGGTCATTCTTGGAACCATGTATGCCGGTGAAATGAAGAAGGGCCTCTTCAGTGTCATGCATTATCTCATGCCCAAGCGCCAAATCCTCTCCCTCCACTCTGGCTGCAATATGGGGAAGAGTGGAGATGTTGCCCTCTTCTTTGGTTTGTCAGGTACCGGTAAGACAACCCTTTCCACTGATCACAACAGGTACTTGATCGGAGATGATGAGCACTGCTGGAGCGACAAAGGTGTGTCGAACATCGAAGGTGGTTGCTATGCCAAGTGCATTGACCTTTCCAGGGAGAAGGAGCCTGACATTTGGAACGCCATCAAGTTTGGCGCTGTGCTGGAAAATGTTGTGTTCGATGATTATACCCGACTGGTGAACTATGCAGACAAATCTGTTACAGAGAACACTCGTGCAGCCTACCCCATCGAATTCATCCCCAACGCACTGATCCCATGTGTTGGCCCCCACCCTAAGAATGTCATTCTTCTGGCATGTGATGCATTTGGTGTGCTCCCACCTGTGAGCAAGCTGAACCTGGCACAGACCATGTACCACTTCATCAGTGGCTACACTGCCCTGGTTGCTGGAACTGAAGATGGTATCAAGGAGCCAACGGCAACATTCTCAGCCTGCTTTGGTGCAGCATTTCTAATGCTGCATCCTACCAAGTATGCAGCAATGTTGGCTGAGAAGATGCAGACGCATGGTGCAACTGGATGGCTGGTGAACACTGGCTGGTCTGGTGGAAGCTATGGATCCGGAAGCCGCATCAAGCTAGCCTACACAAGGAAAATCATTGATGCCATCCACTCCGGCAGCCTCTTGAAGACAGAGTATAAGAAGACCAAAGTGTTTGGACTTGAGATTCCTAGTGAGGTTGAGGAAGTGCCCTCAGAAATACTTGATCCTGTGAACACTTGGTCAGACAAGAATGCATACAATGAGACACTGATGAAGTTGGCTGGCCTGTTCAAGAACAACTTTGAGACCTTCACAAATTACCAGATTGGCGAGGACAACAAGCTGACTGAGGAGATACTTGCAGCTGGTCCCCACTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004611 GO:0004612 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006006 GO:0006094 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016020 GO:0016036 GO:0016051 GO:0016829 GO:0016830 GO:0016831 GO:0019318 GO:0019319 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0042221 GO:0042594 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046364 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0071496 GO:0071704 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PEPCK_ATP

Protein Analysis

657

Amino Acids

73.74

Weight (kDa)

7.05

Isoelectric Point (pI)

38.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca	FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica	MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica	Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis	pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis	RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata	RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora	Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii	Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa	Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha	Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana	Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	520
Acc65I	GGTACC	1 cut(s)	1070
AccB1I	GGYRCC	1 cut(s)	1070
AccB7I	CCANNNNNTGG	1 cut(s)	1367
AccIII	TCCGGA	2 cut(s)	814, 1667
AciI	CCGC	1 cut(s)	1675
AclWI	GGATC	4 cut(s)	1351, 1659, 1672, 1808
AcsI	RAATTY	2 cut(s)	802, 1337
AcuI	CTGAAG	3 cut(s)	807, 949, 1521
AcvI	CACGTG	1 cut(s)	17
AfaI	GTAC	5 cut(s)	142, 455, 1072, 1109, 1460
AfiI	CCNNNNNNNGG	3 cut(s)	1198, 1367, 1695
AflIII	ACRYGT	3 cut(s)	16, 615, 768
AgeI	ACCGGT	1 cut(s)	1073
AgsI	TTSAA	5 cut(s)	26, 148, 187, 1735, 1882
AjiI	CACGTC	1 cut(s)	477
AjnI	CCWGG	3 cut(s)	1196, 1443, 1485
AluBI	AGCT	9 cut(s)	129, 433, 641, 796, 1438, 1659, 1684, 1933, 1955
AluI	AGCT	9 cut(s)	129, 433, 641, 796, 1438, 1659, 1684, 1933, 1955
Alw21I	GWGCWC	4 cut(s)	232, 615, 1131, 1422
Alw26I	GTCTC	6 cut(s)	266, 272, 528, 736, 1847, 1889
AlwI	GGATC	4 cut(s)	1351, 1659, 1672, 1808
Ama87I	CYCGRG	1 cut(s)	302
Aor13HI	TCCGGA	2 cut(s)	814, 1667
AoxI	GGCC	3 cut(s)	958, 1369, 1873
ApeKI	GCWGC	8 cut(s)	218, 1020, 1322, 1550, 1564, 1583, 1725, 1952
ApoI	RAATTY	2 cut(s)	802, 1337
ArsI	GACNNNNNNTTYG	4 cut(s)	86, 118, 656, 688
AseI	ATTAAT	1 cut(s)	135
AsiGI	ACCGGT	1 cut(s)	1073
Asp700I	GAANNNNTTC	1 cut(s)	586
Asp718I	GGTACC	1 cut(s)	1070
AspLEI	GCGC	4 cut(s)	389, 488, 996, 1241
AspS9I	GGNCC	3 cut(s)	958, 1370, 1958
AsuHPI	GGTGA	7 cut(s)	34, 281, 352, 391, 956, 1294, 1645
AsuNHI	GCTAGC	1 cut(s)	1684
AvaI	CYCGRG	1 cut(s)	302
AvaII	GGWCC	1 cut(s)	1958
BaeGI	GKGCMC	1 cut(s)	1800
BamHI	GGATCC	1 cut(s)	1664
BanI	GGYRCC	1 cut(s)	1070
BauI	CACGAG	1 cut(s)	1317
BbrPI	CACGTG	1 cut(s)	17
BbsI	GAAGAC	2 cut(s)	1742, 1757
Bbv12I	GWGCWC	4 cut(s)	232, 615, 1131, 1422
BbvI	GCAGC	8 cut(s)	205, 1007, 1334, 1551, 1562, 1595, 1737, 1964
BccI	CCATC	6 cut(s)	910, 1235, 1340, 1499, 1620, 1721
BceAI	ACGGC	1 cut(s)	1539
BcgI	CGANNNNNNTGC	2 cut(s)	483, 517
BciT130I	CCWGG	3 cut(s)	1198, 1445, 1487
BclI	TGATCA	1 cut(s)	1096
BcoDI	GTCTC	6 cut(s)	266, 272, 528, 736, 1847, 1889
BfaI	CTAG	5 cut(s)	738, 885, 906, 1685, 1779
BfmI	CTRYAG	1 cut(s)	642
BfoI	RGCGCY	3 cut(s)	390, 997, 1242
BglII	AGATCT	1 cut(s)	669
BisI	GCNGC	9 cut(s)	219, 1021, 1323, 1551, 1565, 1584, 1675, 1726, 1953
BlpI	GCTNAGC	1 cut(s)	429
BlsI	GCNGC	9 cut(s)	220, 1022, 1324, 1552, 1566, 1585, 1676, 1727, 1954
Bme1390I	CCNGG	3 cut(s)	1198, 1445, 1487
Bme18I	GGWCC	1 cut(s)	1958
BmeT110I	CYCGRG	1 cut(s)	302
BmgBI	CACGTC	1 cut(s)	477
BmgT120I	GGNCC	3 cut(s)	958, 1370, 1958
BmiI	GGNNCC	9 cut(s)	508, 589, 931, 1072, 1209, 1372, 1518, 1666, 1960
BmrFI	CCNGG	3 cut(s)	1198, 1445, 1487
BmrI	ACTGGG	1 cut(s)	706
BmsI	GCATC	6 cut(s)	783, 1396, 1576, 1593, 1686, 1699
BmtI	GCTAGC	1 cut(s)	1688
BmuI	ACTGGG	1 cut(s)	706
BpiI	GAAGAC	2 cut(s)	1742, 1757
BpmI	CTGGAG	2 cut(s)	818, 1156
Bpu1102I	GCTNAGC	1 cut(s)	429
BpuEI	CTTGAG	1 cut(s)	1790
BsaAI	YACGTR	1 cut(s)	17
BsaI	GGTCTC	3 cut(s)	272, 528, 1889
BsaJI	CCNNGG	3 cut(s)	303, 1197, 1485
BsaWI	WCCGGW	3 cut(s)	814, 1073, 1667
Bsc4I	CCNNNNNNNGG	3 cut(s)	1198, 1367, 1695
Bse118I	RCCGGY	3 cut(s)	482, 941, 1073
Bse1I	ACTGG	5 cut(s)	520, 701, 1284, 1627, 1645
Bse3DI	GCAATG	1 cut(s)	1593
BseAI	TCCGGA	2 cut(s)	814, 1667
BseBI	CCWGG	3 cut(s)	1198, 1445, 1487
BseDI	CCNNGG	3 cut(s)	303, 1197, 1485
BseGI	GGATG	7 cut(s)	571, 774, 875, 1341, 1567, 1631, 1713
BseLI	CCNNNNNNNGG	3 cut(s)	1198, 1367, 1695
BseMI	GCAATG	1 cut(s)	1593
BseMII	CTCAG	7 cut(s)	267, 420, 575, 1548, 1587, 1815, 1929
BseNI	ACTGG	5 cut(s)	520, 701, 1284, 1627, 1645
BseRI	GAGGAG	1 cut(s)	1955
BseSI	GKGCMC	1 cut(s)	1800
BseXI	GCAGC	8 cut(s)	205, 1007, 1334, 1551, 1562, 1595, 1737, 1964
BsgI	GTGCAG	2 cut(s)	1341, 1569
Bsh1285I	CGRYCG	1 cut(s)	503
BshFI	GGCC	3 cut(s)	960, 1371, 1875
BshNI	GGYRCC	1 cut(s)	1070
BshTI	ACCGGT	1 cut(s)	1073
BsiEI	CGRYCG	1 cut(s)	503
BsiHKAI	GWGCWC	4 cut(s)	232, 615, 1131, 1422
BsiHKCI	CYCGRG	1 cut(s)	302
BsiSI	CCGG	6 cut(s)	483, 815, 942, 1074, 1668, 1722
BsiWI	CGTACG	1 cut(s)	140
BslFI	GGGAC	1 cut(s)	1944
BslI	CCNNNNNNNGG	3 cut(s)	1198, 1367, 1695
BsmAI	GTCTC	6 cut(s)	266, 272, 528, 736, 1847, 1889
BsmFI	GGGAC	1 cut(s)	1944
BsmI	GAATGC	1 cut(s)	1846
BsnI	GGCC	3 cut(s)	960, 1371, 1875
Bso31I	GGTCTC	3 cut(s)	272, 528, 1889
BsoBI	CYCGRG	1 cut(s)	302
Bsp1286I	GDGCHC	5 cut(s)	232, 615, 1131, 1422, 1800
Bsp13I	TCCGGA	2 cut(s)	814, 1667
Bsp143I	GATC	9 cut(s)	500, 568, 669, 892, 1096, 1113, 1356, 1664, 1813
Bsp1720I	GCTNAGC	1 cut(s)	429
BspACI	CCGC	1 cut(s)	1675
BspANI	GGCC	3 cut(s)	960, 1371, 1875
BspCNI	CTCAG	7 cut(s)	268, 421, 574, 1547, 1588, 1814, 1930
BspEI	TCCGGA	2 cut(s)	814, 1667
BspHI	TCATGA	1 cut(s)	621
BspLI	GGNNCC	9 cut(s)	508, 589, 931, 1072, 1209, 1372, 1518, 1666, 1960
BspOI	GCTAGC	1 cut(s)	1688
BspPI	GGATC	4 cut(s)	1351, 1659, 1672, 1808
BspQI	GCTCTTC	2 cut(s)	237, 786
BspT107I	GGYRCC	1 cut(s)	1070
BspTNI	GGTCTC	3 cut(s)	272, 528, 1889
BsrDI	GCAATG	1 cut(s)	1593
BsrFI	RCCGGY	3 cut(s)	482, 941, 1073
BsrI	ACTGG	5 cut(s)	520, 701, 1284, 1627, 1645
BssAI	RCCGGY	3 cut(s)	482, 941, 1073
BssECI	CCNNGG	3 cut(s)	303, 1197, 1485
BssMI	GATC	9 cut(s)	500, 568, 669, 892, 1096, 1113, 1356, 1664, 1813
BssSI	CACGAG	1 cut(s)	1317
Bst2BI	CACGAG	1 cut(s)	1317
Bst2UI	CCWGG	3 cut(s)	1198, 1445, 1487
Bst4CI	ACNGT	2 cut(s)	756, 857
Bst6I	CTCTTC	6 cut(s)	16, 237, 786, 968, 1028, 1058
BstAPI	GCANNNNNTGC	1 cut(s)	1406
BstBAI	YACGTR	1 cut(s)	17
BstC8I	GCNNGC	7 cut(s)	109, 444, 838, 1436, 1540, 1686, 1873
BstDEI	CTNAG	9 cut(s)	276, 318, 429, 561, 1380, 1534, 1596, 1801, 1938
BstENI	CCTNNNNNAGG	1 cut(s)	1693
BstF5I	GGATG	7 cut(s)	571, 774, 875, 1341, 1567, 1631, 1713
BstH2I	RGCGCY	3 cut(s)	390, 997, 1242
BstHHI	GCGC	4 cut(s)	389, 488, 996, 1241
BstKTI	GATC	9 cut(s)	503, 571, 672, 895, 1099, 1116, 1359, 1667, 1816
BstMAI	GTCTC	6 cut(s)	266, 272, 528, 736, 1847, 1889
BstMBI	GATC	9 cut(s)	500, 568, 669, 892, 1096, 1113, 1356, 1664, 1813
BstMCI	CGRYCG	1 cut(s)	503
BstMWI	GCNNNNNNNGC	5 cut(s)	227, 439, 1406, 1490, 1592
BstNI	CCWGG	3 cut(s)	1198, 1445, 1487
BstNSI	RCATGY	4 cut(s)	111, 446, 772, 1404
BstSCI	CCNGG	3 cut(s)	1196, 1443, 1485
BstSFI	CTRYAG	1 cut(s)	642
BstSLI	GKGCMC	1 cut(s)	1800
BstV1I	GCAGC	8 cut(s)	205, 1007, 1334, 1551, 1562, 1595, 1737, 1964
BstV2I	GAAGAC	2 cut(s)	1742, 1757
BstX2I	RGATCY	2 cut(s)	669, 1664
BstXI	CCANNNNNNTGG	1 cut(s)	259
BstYI	RGATCY	2 cut(s)	669, 1664
BsuRI	GGCC	3 cut(s)	960, 1371, 1875
BtrI	CACGTC	1 cut(s)	477
BtsCI	GGATG	7 cut(s)	571, 774, 875, 1341, 1567, 1631, 1713
BtsI	GCAGTG	3 cut(s)	1129, 1479, 1963
Cac8I	GCNNGC	7 cut(s)	109, 444, 838, 1436, 1540, 1686, 1873
CciI	TCATGA	1 cut(s)	621
CfoI	GCGC	4 cut(s)	389, 488, 996, 1241
Cfr10I	RCCGGY	3 cut(s)	482, 941, 1073
Cfr13I	GGNCC	3 cut(s)	958, 1370, 1958
CseI	GACGC	3 cut(s)	364, 560, 1618
Csp6I	GTAC	5 cut(s)	141, 454, 1071, 1108, 1459
CspAI	ACCGGT	1 cut(s)	1073
CviQI	GTAC	5 cut(s)	141, 454, 1071, 1108, 1459
DdeI	CTNAG	9 cut(s)	276, 318, 429, 561, 1380, 1534, 1596, 1801, 1938
DpnI	GATC	9 cut(s)	502, 570, 671, 894, 1098, 1115, 1358, 1666, 1815
DpnII	GATC	9 cut(s)	500, 568, 669, 892, 1096, 1113, 1356, 1664, 1813
DrdI	GACNNNNNNGTC	1 cut(s)	520
DseDI	GACNNNNNNGTC	1 cut(s)	520
Eam1104I	CTCTTC	6 cut(s)	16, 237, 786, 968, 1028, 1058
EarI	CTCTTC	6 cut(s)	16, 237, 786, 968, 1028, 1058
Eco31I	GGTCTC	3 cut(s)	272, 528, 1889
Eco47I	GGWCC	1 cut(s)	1958
Eco57I	CTGAAG	3 cut(s)	807, 949, 1521
Eco72I	CACGTG	1 cut(s)	17
Eco88I	CYCGRG	1 cut(s)	302
EcoNI	CCTNNNNNAGG	1 cut(s)	1693
EcoO109I	RGGNCCY	1 cut(s)	958
EcoRI	GAATTC	1 cut(s)	1337
EcoRII	CCWGG	3 cut(s)	1196, 1443, 1485
EcoT22I	ATGCAT	4 cut(s)	113, 978, 1411, 1846
FalI	AAGNNNNNCTT	4 cut(s)	947, 979, 1874, 1906
FaqI	GGGAC	1 cut(s)	1944
FbaI	TGATCA	1 cut(s)	1096
Fnu4HI	GCNGC	9 cut(s)	219, 1021, 1323, 1551, 1565, 1584, 1675, 1726, 1953
FokI	GGATG	7 cut(s)	578, 761, 862, 1328, 1554, 1638, 1700
Fsp4HI	GCNGC	9 cut(s)	219, 1021, 1323, 1551, 1565, 1584, 1675, 1726, 1953
FspBI	CTAG	5 cut(s)	738, 885, 906, 1685, 1779
GlaI	GCGC	4 cut(s)	388, 487, 995, 1240
GluI	GCNGC	9 cut(s)	219, 1021, 1323, 1551, 1565, 1584, 1675, 1726, 1953
GsuI	CTGGAG	2 cut(s)	818, 1156
HaeII	RGCGCY	3 cut(s)	390, 997, 1242
HaeIII	GGCC	3 cut(s)	960, 1371, 1875
HapII	CCGG	6 cut(s)	483, 815, 942, 1074, 1668, 1722
HgaI	GACGC	3 cut(s)	364, 560, 1618
HhaI	GCGC	4 cut(s)	389, 488, 996, 1241
Hin6I	GCGC	4 cut(s)	387, 486, 994, 1239
HinP1I	GCGC	4 cut(s)	387, 486, 994, 1239
HindIII	AAGCTT	1 cut(s)	127
HinfI	GANTC	2 cut(s)	701, 1774
HpaII	CCGG	6 cut(s)	483, 815, 942, 1074, 1668, 1722
HphI	GGTGA	7 cut(s)	34, 281, 352, 391, 956, 1294, 1645
Hpy166II	GTNNAC	5 cut(s)	399, 480, 1285, 1636, 1822
Hpy188I	TCNGA	6 cut(s)	693, 706, 779, 1118, 1804, 1834
Hpy188III	TCNNGA	9 cut(s)	26, 154, 504, 563, 622, 815, 1668, 1732, 1882
Hpy8I	GTNNAC	5 cut(s)	399, 480, 1285, 1636, 1822
HpyAV	CCTTC	7 cut(s)	55, 454, 904, 949, 1157, 1198, 1909
HpyCH4III	ACNGT	2 cut(s)	756, 857
HpyCH4IV	ACGT	5 cut(s)	16, 143, 405, 476, 617
HpyF10VI	GCNNNNNNNGC	5 cut(s)	227, 439, 1406, 1490, 1592
HpyF3I	CTNAG	9 cut(s)	276, 318, 429, 561, 1380, 1534, 1596, 1801, 1938
HpySE526I	ACGT	5 cut(s)	16, 143, 405, 476, 617
HspAI	GCGC	4 cut(s)	387, 486, 994, 1239
Kpn2I	TCCGGA	2 cut(s)	814, 1667
KpnI	GGTACC	1 cut(s)	1074
Ksp22I	TGATCA	1 cut(s)	1096
Kzo9I	GATC	9 cut(s)	500, 568, 669, 892, 1096, 1113, 1356, 1664, 1813
LguI	GCTCTTC	2 cut(s)	237, 786
LmnI	GCTCC	5 cut(s)	506, 1137, 1207, 1425, 1516
Lsp1109I	GCAGC	8 cut(s)	205, 1007, 1334, 1551, 1562, 1595, 1737, 1964
LweI	GCATC	6 cut(s)	783, 1396, 1576, 1593, 1686, 1699
MaeI	CTAG	5 cut(s)	738, 885, 906, 1685, 1779
MaeII	ACGT	5 cut(s)	16, 143, 405, 476, 617
MaeIII	GTNAC	4 cut(s)	351, 380, 857, 1303
MalI	GATC	9 cut(s)	502, 570, 671, 894, 1098, 1115, 1358, 1666, 1815
MboI	GATC	9 cut(s)	500, 568, 669, 892, 1096, 1113, 1356, 1664, 1813
MflI	RGATCY	2 cut(s)	669, 1664
MhlI	GDGCHC	5 cut(s)	232, 615, 1131, 1422, 1800
MmeI	TCCRAC	1 cut(s)	802
Mph1103I	ATGCAT	4 cut(s)	113, 978, 1411, 1846
MroI	TCCGGA	2 cut(s)	814, 1667
MroXI	GAANNNNTTC	1 cut(s)	586
MseI	TTAA	8 cut(s)	86, 131, 135, 240, 392, 627, 653, 717
MslI	CAYNNNNRTG	2 cut(s)	602, 620
MspA1I	CMGCKG	1 cut(s)	1955
MspI	CCGG	6 cut(s)	483, 815, 942, 1074, 1668, 1722
MspR9I	CCNGG	3 cut(s)	1198, 1445, 1487
Mva1269I	GAATGC	1 cut(s)	1846
MvaI	CCWGG	3 cut(s)	1198, 1445, 1487
MwoI	GCNNNNNNNGC	5 cut(s)	227, 439, 1406, 1490, 1592
NdeII	GATC	9 cut(s)	500, 568, 669, 892, 1096, 1113, 1356, 1664, 1813
NheI	GCTAGC	1 cut(s)	1684
NlaIV	GGNNCC	9 cut(s)	508, 589, 931, 1072, 1209, 1372, 1518, 1666, 1960
NmuCI	GTSAC	2 cut(s)	351, 380
NsiI	ATGCAT	4 cut(s)	113, 978, 1411, 1846
NspI	RCATGY	4 cut(s)	111, 446, 772, 1404
PacI	TTAATTAA	1 cut(s)	135
PaeI	GCATGC	2 cut(s)	111, 446
PagI	TCATGA	1 cut(s)	621
PciI	ACATGT	1 cut(s)	768
PciSI	GCTCTTC	2 cut(s)	237, 786
PcsI	WCGNNNNNNNCGW	2 cut(s)	473, 606
PctI	GAATGC	1 cut(s)	1846
PdmI	GAANNNNTTC	1 cut(s)	586
PfeI	GAWTC	2 cut(s)	701, 1774
Pfl23II	CGTACG	1 cut(s)	140
PflMI	CCANNNNNTGG	1 cut(s)	1367
PinAI	ACCGGT	1 cut(s)	1073
PkrI	GCNGC	9 cut(s)	220, 1022, 1324, 1552, 1566, 1585, 1676, 1727, 1954
Ple19I	CGATCG	1 cut(s)	503
PmaCI	CACGTG	1 cut(s)	17
PmlI	CACGTG	1 cut(s)	17
Ppu21I	YACGTR	1 cut(s)	17
PscI	ACATGT	1 cut(s)	768
PshBI	ATTAAT	1 cut(s)	135
Psp6I	CCWGG	3 cut(s)	1196, 1443, 1485
PspCI	CACGTG	1 cut(s)	17
PspGI	CCWGG	3 cut(s)	1196, 1443, 1485
PspLI	CGTACG	1 cut(s)	140
PspN4I	GGNNCC	9 cut(s)	508, 589, 931, 1072, 1209, 1372, 1518, 1666, 1960
PspPI	GGNCC	3 cut(s)	958, 1370, 1958
PsuI	RGATCY	2 cut(s)	669, 1664
PvuI	CGATCG	1 cut(s)	503
PvuII	CAGCTG	1 cut(s)	1955
RsaI	GTAC	5 cut(s)	142, 455, 1072, 1109, 1460
RsaNI	GTAC	5 cut(s)	141, 454, 1071, 1108, 1459
RseI	CAYNNNNRTG	2 cut(s)	602, 620
SapI	GCTCTTC	2 cut(s)	237, 786
SaqAI	TTAA	8 cut(s)	86, 131, 135, 240, 392, 627, 653, 717
SatI	GCNGC	9 cut(s)	219, 1021, 1323, 1551, 1565, 1584, 1675, 1726, 1953
Sau3AI	GATC	9 cut(s)	500, 568, 669, 892, 1096, 1113, 1356, 1664, 1813
Sau96I	GGNCC	3 cut(s)	958, 1370, 1958
ScrFI	CCNGG	3 cut(s)	1198, 1445, 1487
SduI	GDGCHC	5 cut(s)	232, 615, 1131, 1422, 1800
SfaNI	GCATC	6 cut(s)	783, 1396, 1576, 1593, 1686, 1699
SfcI	CTRYAG	1 cut(s)	642
SgrAI	CRCCGGYG	1 cut(s)	482
SinI	GGWCC	1 cut(s)	1958
SmiMI	CAYNNNNRTG	2 cut(s)	602, 620
SmlI	CTYRAG	1 cut(s)	1769
SmoI	CTYRAG	1 cut(s)	1769
SphI	GCATGC	2 cut(s)	111, 446
SsiI	CCGC	1 cut(s)	1675
SspMI	CTAG	5 cut(s)	738, 885, 906, 1685, 1779
StyD4I	CCNGG	3 cut(s)	1196, 1443, 1485
TaaI	ACNGT	2 cut(s)	756, 857
TaiI	ACGT	5 cut(s)	19, 146, 408, 479, 620
TaqI	TCGA	7 cut(s)	155, 499, 600, 1154, 1161, 1263, 1335
TaqII	GACCGA	1 cut(s)	510
TauI	GCSGC	1 cut(s)	1677
TfiI	GAWTC	2 cut(s)	701, 1774
Tru1I	TTAA	8 cut(s)	86, 131, 135, 240, 392, 627, 653, 717
Tru9I	TTAA	8 cut(s)	86, 131, 135, 240, 392, 627, 653, 717
TseFI	GTSAC	2 cut(s)	351, 380
TseI	GCWGC	8 cut(s)	218, 1020, 1322, 1550, 1564, 1583, 1725, 1952
Tsp45I	GTSAC	2 cut(s)	351, 380
TspDTI	ATGAA	9 cut(s)	58, 224, 460, 610, 748, 965, 1330, 1456, 1877
Van91I	CCANNNNNTGG	1 cut(s)	1367
VpaK11BI	GGWCC	1 cut(s)	1958
VspI	ATTAAT	1 cut(s)	135
XagI	CCTNNNNNAGG	1 cut(s)	1693
XapI	RAATTY	2 cut(s)	802, 1337
XceI	RCATGY	4 cut(s)	111, 446, 772, 1404
XcmI	CCANNNNNNNNNTGG	3 cut(s)	256, 601, 1469
XmnI	GAANNNNTTC	1 cut(s)	586
XspI	CTAG	5 cut(s)	738, 885, 906, 1685, 1779
Zsp2I	ATGCAT	4 cut(s)	113, 978, 1411, 1846

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.