Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000550

Physical Location & Seq

Genomic Coordinates Forward (+)

56601954 .. 56607016

Gene Structure 5063 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ33134

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGTGGATTGAGATGGAGTTTAACGGTGACGGAGATTTCAGCTTTGCGACTGGGAACGGCAACGGAGTGGCCAGGAATGGGCTGGCGAAGATCCATACGACACCACAGAACGGGAATGGGGTGTGCCACAATGATAGCTCGACGACTGTGAAGGCTCAGACCATCGAGCAGCTTCATTCGCTGCAGAAGAAGAAGTCGGCACCAACGACACCCATCAAGGGCACTCAGGGAGACTTTGCTGTCGCTCTCTCCGAGGAGGAACGCCAGATGCAGCAGCTCCAGTCCATCAGTAACTCTCTGGCGTCGCTGACGAGAGGGACTGGACCAAAGGTTGTGAGAGGAGACCCTGCTCAGCAGTCTCCTCATCATACCCCAAAGGTGTCATCGCACCACCATCATTTCACTCCCACCATCAGCGTCAGTGACAGTGCCCTCAAGTTCACCCATGTCCTGTACAACCTCTCTCCTGCTGAGCTATATGAGCAGGCGATAAATAATGAAAAGGGGTCGTTCGTTACGTCAACAGGCGCATTAGCAACACTTTCTGGAGCCAAGACGGGTCGGTCTCCAAGGGATAAACGCGTCGTCAAGGATGAGACCACAGAGGAGGAGCTTTGGTGGGGAAGGGGTTCACCAAACATTGAAATGGACGAGCACACTTTCATGGTCAACAGGGAAAGAGCTGTGGATTACCTGAATTCTTTGGACAAGGTCTTTGTAAATGACCAATACTTGAACTGGGATCCAGAAAACAGAATCAAAGTGCGTATTGTCTCTGCCAGGGCTTATCATTCTTTGTTCATGCACAACATGTGTATCCGACCCAGTCCTGAAGAGCTGGAGAATTTTGGTACTCCGGACTTCACTATTTACAATGCTGGTCAGTTCCCGTGTAATCGTTACACCCACTACATGACATCCTCCACTAGCATAGATCTTAATCTTGGTAGGAGGGAAATGGTCATCCTCGGCACCATGTATGCCGGGGAAATGAAGAAAGGTCTTTTCAGTCTCATGCATTATCTCATGCCTAAGCGACAAATCCTATCCCTACATTCTGGCTGCAATATGGGGAAAGATGGAGATGTTGCACTGTTCTTTGGATTGTCAGGTACTGGGAAGACAACTCTGTCTACTGATCACAATAGATACCTAATTGGAGATGATGAGCACTGTTGGACTGAGAATGGTGTATCAAATATCGAAGGGGGTTGCTATGCCAAGTGTATTGATCTCTCGAGGGAGAAAGAGCCTGACATCTGGAATGCCATCAAGTTTGGTGCTGTGTTGGAAAATGTTGTGTTTGATGAGCATACTCGAGAAGTGGATTATTCTGACAAATCTGTTACAGAGAATACTCGGGCAGCCTACCCCATTGAGTACATTCCCAATGCAAAAATACCGTGTGTTGGTCCTCATCCGAAGAATGTGATACTTTTGGCATGTGATGCATTTGGTGTGCTCCCACCTGTGAGCAAGTTAAACCTGGCACAGACCATGTACCATTTCATCAGTGGCTATACTGCACTGGTTGCTGGAACAGAAGAGGGCATTAAGGAGCCACAGGCAACATTCTCGGCTTGCTTTGGTGCTGCATTTATAATGTTGCATCCAACGAAGTATGCAGCAATGCTTGCTCAGAAAATGCAGCAGCATGGTGCAACTGGATGGCTGGTCAACACTGGCTGGTCTGGCGGAAGGTATGGATCGGGAAAGCGCATTAAGCTACCCTACACCCGGAAAATCATTGATGCCATACACTCTGGCAGCCTCTTGAATGCAAATTACAAGAAGATTGAAGTGTTTGGACTTGAGATCCCCAATGAGATTGAGGGAGTGCCTTCAGAAATACTGGATCCAGTGAACACTTGGTCAGACAAGAATGCATACCAGGAAACACTCCTGAAGTTGGCTGGTCTATTTAAGAACAACTTTGAGACTTTCACAAACTACAAGATTGGCAAGGACAACAAGCTGACTGAAGAAATTCTCGCTGCTGGTCCGAATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004611 GO:0004612 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006006 GO:0006094 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016020 GO:0016036 GO:0016051 GO:0016829 GO:0016830 GO:0016831 GO:0019318 GO:0019319 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0042221 GO:0042594 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046364 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0071496 GO:0071704 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PEPCK_ATP

Protein Analysis

670

Amino Acids

74.36

Weight (kDa)

6.32

Isoelectric Point (pI)

39.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPCK_ATP	PF01293	149 - 616	1.7e-214	Phosphoenolpyruvate carboxykinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca	FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica	MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica	Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis	pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis	RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata	RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora	Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii	Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa	Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha	Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana	Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1601
AasI	GACNNNNNNGTC	3 cut(s)	239, 562, 1129
AccB1I	GGYRCC	2 cut(s)	199, 971
AccI	GTMKAC	1 cut(s)	1133
AccII	CGCG	1 cut(s)	582
AccIII	TCCGGA	1 cut(s)	856
AciI	CCGC	1 cut(s)	1695
AclWI	GGATC	7 cut(s)	85, 737, 750, 1714, 1810, 1850, 1863
AcoI	YGGCCR	1 cut(s)	69
AcsI	RAATTY	4 cut(s)	697, 844, 1986, 2005
AcuI	CTGAAG	4 cut(s)	852, 1827, 1925, 2001
AcyI	GRCGYC	1 cut(s)	302
AfaI	GTAC	5 cut(s)	455, 853, 1114, 1382, 1502
AfiI	CCNNNNNNNGG	6 cut(s)	78, 110, 218, 1409, 1737, 1909
AflIII	ACRYGT	2 cut(s)	580, 810
AgsI	TTSAA	4 cut(s)	644, 736, 1777, 1799
AjnI	CCWGG	4 cut(s)	71, 779, 1485, 1890
Alw21I	GWGCWC	3 cut(s)	657, 1173, 1464
Alw26I	GTCTC	8 cut(s)	225, 336, 363, 570, 590, 778, 1016, 1931
AlwI	GGATC	7 cut(s)	85, 737, 750, 1714, 1810, 1850, 1863
AlwNI	CAGNNNCTG	1 cut(s)	1115
Ama87I	CYCGRG	3 cut(s)	1237, 1317, 1359
Aor13HI	TCCGGA	1 cut(s)	856
AoxI	GGCC	1 cut(s)	69
ApoI	RAATTY	4 cut(s)	697, 844, 1986, 2005
ArsI	GACNNNNNNTTYG	2 cut(s)	698, 730
Asp700I	GAANNNNTTC	2 cut(s)	628, 1986
AspLEI	GCGC	2 cut(s)	530, 1719
AspS9I	GGNCC	3 cut(s)	323, 1412, 2000
AsuC2I	CCSGG	2 cut(s)	985, 1738
AsuHPI	GGTGA	3 cut(s)	38, 433, 624
AvaI	CYCGRG	3 cut(s)	1237, 1317, 1359
AvaII	GGWCC	3 cut(s)	323, 1412, 2000
BaeGI	GKGCMC	2 cut(s)	224, 433
BaeI	ACNNNNGTAYC	2 cut(s)	799, 832
BalI	TGGCCA	1 cut(s)	71
BamHI	GGATCC	2 cut(s)	742, 1855
BanI	GGYRCC	2 cut(s)	199, 971
BbsI	GAAGAC	1 cut(s)	1127
Bbv12I	GWGCWC	3 cut(s)	657, 1173, 1464
BccI	CCATC	9 cut(s)	7, 170, 221, 293, 402, 419, 1073, 1277, 1662
BceAI	ACGGC	1 cut(s)	73
BcgI	CGANNNNNNTGC	2 cut(s)	1557, 1591
BciT130I	CCWGG	4 cut(s)	73, 781, 1487, 1892
BciVI	GTATCC	1 cut(s)	827
BclI	TGATCA	1 cut(s)	1138
BcnI	CCSGG	2 cut(s)	985, 1738
BcoDI	GTCTC	8 cut(s)	225, 336, 363, 570, 590, 778, 1016, 1931
BfaI	CTAG	2 cut(s)	927, 2011
BfmI	CTRYAG	1 cut(s)	182
BfuI	GTATCC	1 cut(s)	827
BglII	AGATCT	1 cut(s)	934
BlpI	GCTNAGC	2 cut(s)	351, 471
Bme1390I	CCNGG	6 cut(s)	73, 781, 985, 1487, 1738, 1892
Bme18I	GGWCC	3 cut(s)	323, 1412, 2000
BmeT110I	CYCGRG	3 cut(s)	1237, 1317, 1359
BmgT120I	GGNCC	3 cut(s)	323, 1412, 2000
BmiI	GGNNCC	6 cut(s)	201, 550, 744, 973, 1560, 1857
BmrFI	CCNGG	6 cut(s)	73, 781, 985, 1487, 1738, 1892
BmrI	ACTGGG	4 cut(s)	60, 748, 819, 1125
BmsI	GCATC	4 cut(s)	258, 1438, 1618, 1741
BmuI	ACTGGG	4 cut(s)	60, 748, 819, 1125
BpiI	GAAGAC	1 cut(s)	1127
BpmI	CTGGAG	3 cut(s)	263, 567, 860
Bpu10I	CCTNAGC	1 cut(s)	1032
Bpu1102I	GCTNAGC	2 cut(s)	351, 471
BpuEI	CTTGAG	2 cut(s)	419, 1832
BpuMI	CCSGG	2 cut(s)	985, 1738
BsaBI	GATNNNNATC	1 cut(s)	939
BsaHI	GRCGYC	1 cut(s)	302
BsaI	GGTCTC	3 cut(s)	336, 570, 590
BsaJI	CCNNGG	5 cut(s)	252, 569, 780, 967, 984
BsaWI	WCCGGW	1 cut(s)	856
BsaXI	ACNNNNNCTCC	2 cut(s)	602, 632
Bsc4I	CCNNNNNNNGG	6 cut(s)	78, 110, 218, 1409, 1737, 1909
Bse3DI	GCAATG	1 cut(s)	1635
Bse8I	GATNNNNATC	1 cut(s)	939
BseAI	TCCGGA	1 cut(s)	856
BseBI	CCWGG	4 cut(s)	73, 781, 1487, 1892
BseDI	CCNNGG	5 cut(s)	252, 569, 780, 967, 984
BseGI	GGATG	6 cut(s)	598, 917, 963, 1417, 1609, 1673
BseJI	GATNNNNATC	1 cut(s)	939
BseLI	CCNNNNNNNGG	6 cut(s)	78, 110, 218, 1409, 1737, 1909
BseMI	GCAATG	1 cut(s)	1635
BseMII	CTCAG	6 cut(s)	170, 239, 365, 462, 1173, 1652
BseRI	GAGGAG	5 cut(s)	269, 351, 354, 620, 623
BseSI	GKGCMC	2 cut(s)	224, 433
BsgI	GTGCAG	1 cut(s)	1509
Bsh1236I	CGCG	1 cut(s)	582
BshFI	GGCC	1 cut(s)	71
BshNI	GGYRCC	2 cut(s)	199, 971
BsiHKAI	GWGCWC	3 cut(s)	657, 1173, 1464
BsiHKCI	CYCGRG	3 cut(s)	1237, 1317, 1359
BsiSI	CCGG	3 cut(s)	857, 984, 1738
BslFI	GGGAC	1 cut(s)	331
BslI	CCNNNNNNNGG	6 cut(s)	78, 110, 218, 1409, 1737, 1909
BsmAI	GTCTC	8 cut(s)	225, 336, 363, 570, 590, 778, 1016, 1931
BsmFI	GGGAC	1 cut(s)	331
BsmI	GAATGC	3 cut(s)	1270, 1783, 1888
BsnI	GGCC	1 cut(s)	71
Bso31I	GGTCTC	3 cut(s)	336, 570, 590
BsoBI	CYCGRG	3 cut(s)	1237, 1317, 1359
Bsp1286I	GDGCHC	5 cut(s)	224, 433, 657, 1173, 1464
Bsp13I	TCCGGA	1 cut(s)	856
Bsp1407I	TGTACA	1 cut(s)	453
Bsp143I	GATC	8 cut(s)	90, 742, 934, 1138, 1231, 1706, 1815, 1855
Bsp1720I	GCTNAGC	2 cut(s)	351, 471
BspACI	CCGC	1 cut(s)	1695
BspANI	GGCC	1 cut(s)	71
BspCNI	CTCAG	6 cut(s)	169, 238, 364, 463, 1174, 1651
BspEI	TCCGGA	1 cut(s)	856
BspFNI	CGCG	1 cut(s)	582
BspLI	GGNNCC	6 cut(s)	201, 550, 744, 973, 1560, 1857
BspMAI	CTGCAG	1 cut(s)	186
BspPI	GGATC	7 cut(s)	85, 737, 750, 1714, 1810, 1850, 1863
BspQI	GCTCTTC	1 cut(s)	828
BspT107I	GGYRCC	2 cut(s)	199, 971
BspTNI	GGTCTC	3 cut(s)	336, 570, 590
BsrDI	GCAATG	1 cut(s)	1635
BsrGI	TGTACA	1 cut(s)	453
BssECI	CCNNGG	5 cut(s)	252, 569, 780, 967, 984
BssMI	GATC	8 cut(s)	90, 742, 934, 1138, 1231, 1706, 1815, 1855
BssNI	GRCGYC	1 cut(s)	302
BssT1I	CCWWGG	1 cut(s)	569
Bst2UI	CCWGG	4 cut(s)	73, 781, 1487, 1892
Bst4CI	ACNGT	6 cut(s)	26, 148, 428, 1095, 1175, 1404
Bst6I	CTCTTC	2 cut(s)	828, 1539
BstACI	GRCGYC	1 cut(s)	302
BstAPI	GCANNNNNTGC	3 cut(s)	1448, 1532, 1634
BstAUI	TGTACA	1 cut(s)	453
BstC8I	GCNNGC	4 cut(s)	84, 486, 1582, 1635
BstDEI	CTNAG	7 cut(s)	156, 225, 351, 471, 1032, 1182, 1638
BstF5I	GGATG	6 cut(s)	598, 917, 963, 1417, 1609, 1673
BstFNI	CGCG	1 cut(s)	582
BstHHI	GCGC	2 cut(s)	530, 1719
BstKTI	GATC	8 cut(s)	93, 745, 937, 1141, 1234, 1709, 1818, 1858
BstMAI	GTCTC	8 cut(s)	225, 336, 363, 570, 590, 778, 1016, 1931
BstMBI	GATC	8 cut(s)	90, 742, 934, 1138, 1231, 1706, 1815, 1855
BstMWI	GCNNNNNNNGC	7 cut(s)	178, 481, 1448, 1532, 1634, 1692, 1723
BstNI	CCWGG	4 cut(s)	73, 781, 1487, 1892
BstNSI	RCATGY	2 cut(s)	814, 1446
BstSCI	CCNGG	6 cut(s)	71, 779, 983, 1485, 1736, 1890
BstSFI	CTRYAG	1 cut(s)	182
BstSLI	GKGCMC	2 cut(s)	224, 433
BstUI	CGCG	1 cut(s)	582
BstV2I	GAAGAC	1 cut(s)	1127
BstX2I	RGATCY	5 cut(s)	90, 742, 934, 1815, 1855
BstYI	RGATCY	5 cut(s)	90, 742, 934, 1815, 1855
BsuI	GTATCC	1 cut(s)	827
BsuRI	GGCC	1 cut(s)	71
BtgZI	GCGATG	1 cut(s)	369
BtsCI	GGATG	6 cut(s)	598, 917, 963, 1417, 1609, 1673
BtsIMutI	CAGTG	8 cut(s)	427, 433, 1091, 1171, 1519, 1526, 1680, 1866
Cac8I	GCNNGC	4 cut(s)	84, 486, 1582, 1635
CaiI	CAGNNNCTG	1 cut(s)	1115
CfoI	GCGC	2 cut(s)	530, 1719
Cfr13I	GGNCC	3 cut(s)	323, 1412, 2000
CseI	GACGC	3 cut(s)	291, 406, 571
Csp6I	GTAC	5 cut(s)	454, 852, 1113, 1381, 1501
CviQI	GTAC	5 cut(s)	454, 852, 1113, 1381, 1501
DdeI	CTNAG	7 cut(s)	156, 225, 351, 471, 1032, 1182, 1638
DpnI	GATC	8 cut(s)	92, 744, 936, 1140, 1233, 1708, 1817, 1857
DpnII	GATC	8 cut(s)	90, 742, 934, 1138, 1231, 1706, 1815, 1855
DrdI	GACNNNNNNGTC	3 cut(s)	239, 562, 1129
DseDI	GACNNNNNNGTC	3 cut(s)	239, 562, 1129
EaeI	YGGCCR	1 cut(s)	69
Eam1104I	CTCTTC	2 cut(s)	828, 1539
EarI	CTCTTC	2 cut(s)	828, 1539
EciI	GGCGGA	1 cut(s)	1710
Eco130I	CCWWGG	1 cut(s)	569
Eco31I	GGTCTC	3 cut(s)	336, 570, 590
Eco47I	GGWCC	3 cut(s)	323, 1412, 2000
Eco57I	CTGAAG	4 cut(s)	852, 1827, 1925, 2001
Eco88I	CYCGRG	3 cut(s)	1237, 1317, 1359
EcoRI	GAATTC	1 cut(s)	697
EcoRII	CCWGG	4 cut(s)	71, 779, 1485, 1890
EcoT14I	CCWWGG	1 cut(s)	569
EcoT22I	ATGCAT	3 cut(s)	1020, 1453, 1888
ErhI	CCWWGG	1 cut(s)	569
FalI	AAGNNNNNCTT	2 cut(s)	1916, 1948
FaqI	GGGAC	1 cut(s)	331
FbaI	TGATCA	1 cut(s)	1138
FblI	GTMKAC	1 cut(s)	1133
FokI	GGATG	6 cut(s)	605, 904, 950, 1404, 1596, 1680
FspBI	CTAG	2 cut(s)	927, 2011
GlaI	GCGC	2 cut(s)	529, 1718
GsuI	CTGGAG	3 cut(s)	263, 567, 860
HaeIII	GGCC	1 cut(s)	71
HapII	CCGG	3 cut(s)	857, 984, 1738
HgaI	GACGC	3 cut(s)	291, 406, 571
HhaI	GCGC	2 cut(s)	530, 1719
Hin1I	GRCGYC	1 cut(s)	302
Hin6I	GCGC	2 cut(s)	528, 1717
HinP1I	GCGC	2 cut(s)	528, 1717
HincII	GTYRAC	3 cut(s)	522, 670, 1678
HindII	GTYRAC	3 cut(s)	522, 670, 1678
HinfI	GANTC	1 cut(s)	756
HpaII	CCGG	3 cut(s)	857, 984, 1738
HphI	GGTGA	3 cut(s)	38, 433, 624
Hpy166II	GTNNAC	7 cut(s)	441, 522, 632, 670, 1134, 1678, 1864
Hpy188I	TCNGA	9 cut(s)	159, 253, 821, 1336, 1422, 1641, 1846, 1876, 2004
Hpy8I	GTNNAC	7 cut(s)	441, 522, 632, 670, 1134, 1678, 1864
Hpy99I	CGWCG	3 cut(s)	145, 307, 587
HpyAV	CCTTC	5 cut(s)	145, 618, 1199, 1692, 1851
HpyCH4III	ACNGT	6 cut(s)	26, 148, 428, 1095, 1175, 1404
HpyCH4IV	ACGT	1 cut(s)	518
HpyF10VI	GCNNNNNNNGC	7 cut(s)	178, 481, 1448, 1532, 1634, 1692, 1723
HpyF3I	CTNAG	7 cut(s)	156, 225, 351, 471, 1032, 1182, 1638
HpySE526I	ACGT	1 cut(s)	518
Hsp92I	GRCGYC	1 cut(s)	302
HspAI	GCGC	2 cut(s)	528, 1717
Kpn2I	TCCGGA	1 cut(s)	856
Ksp22I	TGATCA	1 cut(s)	1138
Kzo9I	GATC	8 cut(s)	90, 742, 934, 1138, 1231, 1706, 1815, 1855
LguI	GCTCTTC	1 cut(s)	828
LmnI	GCTCC	5 cut(s)	282, 548, 610, 1467, 1558
LweI	GCATC	4 cut(s)	258, 1438, 1618, 1741
MaeI	CTAG	2 cut(s)	927, 2011
MaeII	ACGT	1 cut(s)	518
MaeIII	GTNAC	6 cut(s)	26, 290, 422, 514, 899, 1345
MalI	GATC	8 cut(s)	92, 744, 936, 1140, 1233, 1708, 1817, 1857
MboI	GATC	8 cut(s)	90, 742, 934, 1138, 1231, 1706, 1815, 1855
MflI	RGATCY	5 cut(s)	90, 742, 934, 1815, 1855
MhlI	GDGCHC	5 cut(s)	224, 433, 657, 1173, 1464
MlsI	TGGCCA	1 cut(s)	71
MluCI	AATT	6 cut(s)	697, 844, 1155, 1783, 1986, 2005
MluI	ACGCGT	1 cut(s)	580
MluNI	TGGCCA	1 cut(s)	71
MmeI	TCCRAC	4 cut(s)	844, 1157, 1269, 1637
Mox20I	TGGCCA	1 cut(s)	71
Mph1103I	ATGCAT	3 cut(s)	1020, 1453, 1888
MroI	TCCGGA	1 cut(s)	856
MroXI	GAANNNNTTC	2 cut(s)	628, 1986
MscI	TGGCCA	1 cut(s)	71
MseI	TTAA	6 cut(s)	21, 939, 1481, 1554, 1722, 1923
MslI	CAYNNNNRTG	2 cut(s)	644, 662
Msp20I	TGGCCA	1 cut(s)	71
MspI	CCGG	3 cut(s)	857, 984, 1738
MspR9I	CCNGG	6 cut(s)	73, 781, 985, 1487, 1738, 1892
Mva1269I	GAATGC	3 cut(s)	1270, 1783, 1888
MvaI	CCWGG	4 cut(s)	73, 781, 1487, 1892
MvnI	CGCG	1 cut(s)	582
MwoI	GCNNNNNNNGC	7 cut(s)	178, 481, 1448, 1532, 1634, 1692, 1723
NciI	CCSGG	2 cut(s)	985, 1738
NdeII	GATC	8 cut(s)	90, 742, 934, 1138, 1231, 1706, 1815, 1855
NlaIV	GGNNCC	6 cut(s)	201, 550, 744, 973, 1560, 1857
NmeAIII	GCCGAG	2 cut(s)	948, 1556
NmuCI	GTSAC	2 cut(s)	26, 422
NsiI	ATGCAT	3 cut(s)	1020, 1453, 1888
NspI	RCATGY	2 cut(s)	814, 1446
PaeR7I	CTCGAG	2 cut(s)	1237, 1317
PciI	ACATGT	1 cut(s)	810
PciSI	GCTCTTC	1 cut(s)	828
PcsI	WCGNNNNNNNCGW	3 cut(s)	203, 249, 515
PctI	GAATGC	3 cut(s)	1270, 1783, 1888
PdmI	GAANNNNTTC	2 cut(s)	628, 1986
PfeI	GAWTC	1 cut(s)	756
PflFI	GACNNNGTC	2 cut(s)	710, 825
PscI	ACATGT	1 cut(s)	810
PsiI	TTATAA	1 cut(s)	1601
Psp6I	CCWGG	4 cut(s)	71, 779, 1485, 1890
PspGI	CCWGG	4 cut(s)	71, 779, 1485, 1890
PspN4I	GGNNCC	6 cut(s)	201, 550, 744, 973, 1560, 1857
PspPI	GGNCC	3 cut(s)	323, 1412, 2000
PstI	CTGCAG	1 cut(s)	186
PstNI	CAGNNNCTG	1 cut(s)	1115
PsuI	RGATCY	5 cut(s)	90, 742, 934, 1815, 1855
PsyI	GACNNNGTC	2 cut(s)	710, 825
RsaI	GTAC	5 cut(s)	455, 853, 1114, 1382, 1502
RsaNI	GTAC	5 cut(s)	454, 852, 1113, 1381, 1501
RseI	CAYNNNNRTG	2 cut(s)	644, 662
SapI	GCTCTTC	1 cut(s)	828
SaqAI	TTAA	6 cut(s)	21, 939, 1481, 1554, 1722, 1923
Sau3AI	GATC	8 cut(s)	90, 742, 934, 1138, 1231, 1706, 1815, 1855
Sau96I	GGNCC	3 cut(s)	323, 1412, 2000
ScrFI	CCNGG	6 cut(s)	73, 781, 985, 1487, 1738, 1892
SduI	GDGCHC	5 cut(s)	224, 433, 657, 1173, 1464
SfaNI	GCATC	4 cut(s)	258, 1438, 1618, 1741
SfcI	CTRYAG	1 cut(s)	182
Sfr274I	CTCGAG	2 cut(s)	1237, 1317
SinI	GGWCC	3 cut(s)	323, 1412, 2000
SlaI	CTCGAG	2 cut(s)	1237, 1317
SmiMI	CAYNNNNRTG	2 cut(s)	644, 662
SmlI	CTYRAG	4 cut(s)	434, 1237, 1317, 1811
SmoI	CTYRAG	4 cut(s)	434, 1237, 1317, 1811
Sse9I	AATT	6 cut(s)	697, 844, 1155, 1783, 1986, 2005
SsiI	CCGC	1 cut(s)	1695
SspMI	CTAG	2 cut(s)	927, 2011
StyD4I	CCNGG	6 cut(s)	71, 779, 983, 1485, 1736, 1890
StyI	CCWWGG	1 cut(s)	569
TaaI	ACNGT	6 cut(s)	26, 148, 428, 1095, 1175, 1404
TaiI	ACGT	1 cut(s)	521
TaqI	TCGA	5 cut(s)	140, 165, 1203, 1238, 1318
TaqII	GACCGA	1 cut(s)	552
TasI	AATT	6 cut(s)	697, 844, 1155, 1783, 1986, 2005
TatI	WGTACW	2 cut(s)	453, 1380
TfiI	GAWTC	1 cut(s)	756
Tru1I	TTAA	6 cut(s)	21, 939, 1481, 1554, 1722, 1923
Tru9I	TTAA	6 cut(s)	21, 939, 1481, 1554, 1722, 1923
TscAI	CASTG	8 cut(s)	427, 433, 1098, 1178, 1519, 1533, 1687, 1866
TseFI	GTSAC	2 cut(s)	26, 422
Tsp45I	GTSAC	2 cut(s)	26, 422
TspDTI	ATGAA	6 cut(s)	164, 513, 652, 790, 1007, 1498
TspGWI	ACGGA	2 cut(s)	45, 78
TspRI	CASTG	8 cut(s)	427, 433, 1098, 1178, 1519, 1533, 1687, 1866
Tth111I	GACNNNGTC	2 cut(s)	710, 825
VpaK11BI	GGWCC	3 cut(s)	323, 1412, 2000
XapI	RAATTY	4 cut(s)	697, 844, 1986, 2005
XceI	RCATGY	2 cut(s)	814, 1446
XcmI	CCANNNNNNNNNTGG	3 cut(s)	79, 1511, 1866
XhoI	CTCGAG	2 cut(s)	1237, 1317
XmiI	GTMKAC	1 cut(s)	1133
XmnI	GAANNNNTTC	2 cut(s)	628, 1986
XspI	CTAG	2 cut(s)	927, 2011
Zsp2I	ATGCAT	3 cut(s)	1020, 1453, 1888

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.