Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000550

Physical Location & Seq

Genomic Coordinates Reverse (-)

14301624 .. 14305012

Gene Structure 3389 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g10540.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGGCTATCGGTGAGACCAAAGTTGCCCAAGAAGAATGCAAGGTTGTGAAAAAAGATCCTGCATCTAACAAGACGAATACCGATAACCTCAAGTTTACGCATGTACCTAACTGTTTCGCACCAACTATTTGCGCCACCGACAATGCTGCAAAGTTCATGAAGGTTCTACATAACCTTACTCCCGCCGAGCTCTATGAGCAGGCTCTACAACATGAGAAAGGATCTTTCATCACTTCCAGTGGTGCATTGGCAACTCTTTCTGGGGCAAAAACTGGTCGGTGTCCAAAAGACAAACGCGTCGTCAAAGATGAGTCAACTGAGCAAGAGCTTTGGTGGGGAAATGGTTCACCCAACATCGAAATGGACGAGCAAAGTTTCATGGTCAACAGAGAAACAGCTATGAATTACTTGAATTCTTTGGACAAGGTTTTTGTGAACGATCAATTTATAAATTGGGACCCGGAAAACATAATAAAAGTGCGGATTGTCTCTGCCAAGGCTTACCATTCATTGTTCATGCACAACATGTGTATCCGACCAACTGCTGAGGAGCTGGAGAATTTTGGTAGTCCAGAATTCACTATATACAATGCTGGTCAGTTCCCATGTAATCGTTACACTCATTGCATGACATCCTCTACTAGCATAAACATCAACCTTGCTAGAAAGGAAATGGTCATCCTTGGCACCATGTATGCCGGGGAAATGAAGAAAGGTCTTTTCAGTTTAATGCACTATCTTATGCCTAAACGACATATCCTTTCCCTACATTCTGGCTGCAATATGGGCAAAGATGGAGATGTTGCCCTTTTCTTCGGGTTATCTGGCACTGGAAAGACGACTCTATCTACGGATCAGAATCGGTACTTAATCGGAGATGATGAGCACTGTTGGAGTGACAACGGTGTATCGAATATCGAAGGCGGTTGCTATGCCAAGTGCATTGATCTCTCTCAAGAGAAAGAGCGTGGCATCTGGAATGCCATCAAGTTTGGATCTGTGCTAGAAAATGTTGCATTCGATGAGCATACTAGAGTGGTGGATTACAGTGACAATTCTATTACAGAGAATACTCGAGCAGCCTATCCCATTGAGTACATCCCCAACGCAAAGATACCATGTGTTGGTCCTCATCCGAAGAATGTGATACTTCTGGCATGCGATGCATTTGGTGTACTCCCACCTGTGAGCAAGTTAAACCTGGCACAAACCATGTACCATTTCATTAGTGGCTACACTGCCCTGGTTGCTGGAACTGAAGAGGGTGTGAAGGAGCCAAAAGCAACATTCTCGGCTTGCTTTGGTGCTGCATTTTTAATGTTGCATCCTACCAAGTACGCAGCAATGCTCGCTGAGAAGATGCAGAAGCATGGTGCAACTGCATGGCTGGTTAACACTGGCTGGTCTGGTGGAAGTTATGGAACAGGAAAGCGCATTAAACTATCCTACACCCGGAAAATCATTGATGCCATACACTCTGGGAGCCTCTTGAATACAAATTACAAGAAGACTGAAGTGTTTGGACTTGAGATCCCTAGTGAGATTGGGGGAGTGCCTTCAGAGATATTGGATCCAGTGAACACTTGGTCCGACAAGAAAGCATATCATGAAACACTTTTGAAGTTGGCTGGCCTGTTCAAAACCAATTTCGAGACTTTCGCAAACTACAAGATTGGCAAGGACAACAAACTGACTGAAGACATCCTCGCTGCTGGTCCCAATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004611 GO:0004612 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006006 GO:0006094 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016020 GO:0016036 GO:0016051 GO:0016829 GO:0016830 GO:0016831 GO:0019318 GO:0019319 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0042221 GO:0042594 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046364 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0071496 GO:0071704 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PEPCK_ATP

Protein Analysis

576

Amino Acids

63.68

Weight (kDa)

6.51

Isoelectric Point (pI)

38.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPCK_ATP	PF01293	54 - 521	4e-213	Phosphoenolpyruvate carboxykinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca	FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica	MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica	Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis	pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis	RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata	RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora	Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii	Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa	Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha	Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana	Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	449
AasI	GACNNNNNNGTC	1 cut(s)	296
AccB1I	GGYRCC	1 cut(s)	686
AccB7I	CCANNNNNTGG	1 cut(s)	1124
AccII	CGCG	1 cut(s)	297
AciI	CCGC	3 cut(s)	183, 481, 924
AclWI	GGATC	7 cut(s)	50, 229, 861, 1003, 1525, 1565, 1578
AcsI	RAATTY	3 cut(s)	412, 559, 575
AcuI	CTGAAG	4 cut(s)	1278, 1533, 1542, 1716
AfaI	GTAC	6 cut(s)	105, 866, 1097, 1176, 1217, 1337
AfiI	CCNNNNNNNGG	2 cut(s)	1124, 1452
AflIII	ACRYGT	2 cut(s)	295, 525
AgsI	TTSAA	4 cut(s)	412, 1492, 1621, 1639
AjnI	CCWGG	2 cut(s)	1200, 1242
AloI	GAACNNNNNNTCC	2 cut(s)	1571, 1603
AluBI	AGCT	4 cut(s)	190, 328, 398, 553
AluI	AGCT	4 cut(s)	190, 328, 398, 553
Alw21I	GWGCWC	2 cut(s)	192, 888
Alw26I	GTCTC	3 cut(s)	8, 493, 1646
AlwI	GGATC	7 cut(s)	50, 229, 861, 1003, 1525, 1565, 1578
Ama87I	CYCGRG	1 cut(s)	1074
AoxI	GGCC	1 cut(s)	1630
ApeKI	GCWGC	6 cut(s)	146, 777, 1079, 1307, 1340, 1709
ApoI	RAATTY	3 cut(s)	412, 559, 575
ArsI	GACNNNNNNTTYG	4 cut(s)	285, 317, 413, 445
Asp700I	GAANNNNTTC	1 cut(s)	343
AspLEI	GCGC	2 cut(s)	134, 1434
AspS9I	GGNCC	4 cut(s)	457, 1127, 1587, 1715
AsuC2I	CCSGG	3 cut(s)	461, 700, 1453
AsuHPI	GGTGA	2 cut(s)	23, 339
AvaI	CYCGRG	1 cut(s)	1074
AvaII	GGWCC	4 cut(s)	457, 1127, 1587, 1715
BaeI	ACNNNNGTAYC	4 cut(s)	87, 120, 514, 547
BamHI	GGATCC	1 cut(s)	1570
BanI	GGYRCC	1 cut(s)	686
BanII	GRGCYC	1 cut(s)	192
BbsI	GAAGAC	2 cut(s)	1514, 1704
Bbv12I	GWGCWC	2 cut(s)	192, 888
BbvCI	CCTCAGC	1 cut(s)	546
BbvI	GCAGC	6 cut(s)	133, 764, 1091, 1294, 1352, 1696
BccI	CCATC	2 cut(s)	788, 992
BcgI	CGANNNNNNTGC	4 cut(s)	128, 162, 1272, 1306
BciT130I	CCWGG	2 cut(s)	1202, 1244
BciVI	GTATCC	1 cut(s)	542
BcnI	CCSGG	3 cut(s)	461, 700, 1453
BcoDI	GTCTC	3 cut(s)	8, 493, 1646
BfaI	CTAG	6 cut(s)	642, 663, 1004, 1032, 1536, 1726
BfuI	GTATCC	1 cut(s)	542
BisI	GCNGC	6 cut(s)	147, 778, 1080, 1308, 1341, 1710
BlsI	GCNGC	6 cut(s)	148, 779, 1081, 1309, 1342, 1711
Bme1390I	CCNGG	5 cut(s)	461, 700, 1202, 1244, 1453
Bme18I	GGWCC	4 cut(s)	457, 1127, 1587, 1715
BmeT110I	CYCGRG	1 cut(s)	1074
BmgT120I	GGNCC	4 cut(s)	457, 1127, 1587, 1715
BmiI	GGNNCC	7 cut(s)	458, 459, 688, 1275, 1484, 1572, 1717
BmrFI	CCNGG	5 cut(s)	461, 700, 1202, 1244, 1453
BmsI	GCATC	6 cut(s)	71, 981, 1153, 1333, 1350, 1456
BpiI	GAAGAC	2 cut(s)	1514, 1704
BpmI	CTGGAG	1 cut(s)	575
Bpu10I	CCTNAGC	1 cut(s)	546
BpuEI	CTTGAG	3 cut(s)	74, 939, 1547
BpuMI	CCSGG	3 cut(s)	461, 700, 1453
BsaBI	GATNNNNATC	1 cut(s)	858
BsaI	GGTCTC	1 cut(s)	8
BsaJI	CCNNGG	4 cut(s)	495, 682, 699, 1242
Bsc4I	CCNNNNNNNGG	2 cut(s)	1124, 1452
Bse1I	ACTGG	5 cut(s)	237, 277, 835, 1402, 1574
Bse3DI	GCAATG	2 cut(s)	622, 1350
Bse8I	GATNNNNATC	1 cut(s)	858
BseBI	CCWGG	2 cut(s)	1202, 1244
BseDI	CCNNGG	4 cut(s)	495, 682, 699, 1242
BseGI	GGATG	6 cut(s)	632, 678, 1098, 1132, 1324, 1701
BseJI	GATNNNNATC	1 cut(s)	858
BseLI	CCNNNNNNNGG	2 cut(s)	1124, 1452
BseMI	GCAATG	2 cut(s)	622, 1350
BseMII	CTCAG	3 cut(s)	309, 537, 1344
BseNI	ACTGG	5 cut(s)	237, 277, 835, 1402, 1574
BseRI	GAGGAG	1 cut(s)	563
BseXI	GCAGC	6 cut(s)	133, 764, 1091, 1294, 1352, 1696
Bsh1236I	CGCG	1 cut(s)	297
BshFI	GGCC	1 cut(s)	1632
BshNI	GGYRCC	1 cut(s)	686
BsiHKAI	GWGCWC	2 cut(s)	192, 888
BsiHKCI	CYCGRG	1 cut(s)	1074
BsiSI	CCGG	3 cut(s)	461, 699, 1453
BslFI	GGGAC	2 cut(s)	470, 1701
BslI	CCNNNNNNNGG	2 cut(s)	1124, 1452
BsmAI	GTCTC	3 cut(s)	8, 493, 1646
BsmFI	GGGAC	2 cut(s)	470, 1701
BsmI	GAATGC	3 cut(s)	41, 985, 1016
BsnI	GGCC	1 cut(s)	1632
Bso31I	GGTCTC	1 cut(s)	8
BsoBI	CYCGRG	1 cut(s)	1074
Bsp1286I	GDGCHC	2 cut(s)	192, 888
Bsp143I	GATC	8 cut(s)	55, 221, 439, 853, 946, 995, 1530, 1570
BspACI	CCGC	3 cut(s)	183, 481, 924
BspANI	GGCC	1 cut(s)	1632
BspCNI	CTCAG	3 cut(s)	310, 538, 1345
BspFNI	CGCG	1 cut(s)	297
BspHI	TCATGA	2 cut(s)	156, 1606
BspLI	GGNNCC	7 cut(s)	458, 459, 688, 1275, 1484, 1572, 1717
BspPI	GGATC	7 cut(s)	50, 229, 861, 1003, 1525, 1565, 1578
BspT107I	GGYRCC	1 cut(s)	686
BspTNI	GGTCTC	1 cut(s)	8
BsrDI	GCAATG	2 cut(s)	622, 1350
BsrI	ACTGG	5 cut(s)	237, 277, 835, 1402, 1574
BssECI	CCNNGG	4 cut(s)	495, 682, 699, 1242
BssMI	GATC	8 cut(s)	55, 221, 439, 853, 946, 995, 1530, 1570
BssT1I	CCWWGG	2 cut(s)	495, 682
Bst2UI	CCWGG	2 cut(s)	1202, 1244
Bst4CI	ACNGT	4 cut(s)	113, 890, 905, 1049
Bst6I	CTCTTC	1 cut(s)	1254
BstAPI	GCANNNNNTGC	1 cut(s)	1163
BstC8I	GCNNGC	5 cut(s)	201, 1159, 1297, 1350, 1630
BstDEI	CTNAG	3 cut(s)	318, 546, 1353
BstF5I	GGATG	6 cut(s)	632, 678, 1098, 1132, 1324, 1701
BstFNI	CGCG	1 cut(s)	297
BstHHI	GCGC	2 cut(s)	134, 1434
BstKTI	GATC	8 cut(s)	58, 224, 442, 856, 949, 998, 1533, 1573
BstMAI	GTCTC	3 cut(s)	8, 493, 1646
BstMBI	GATC	8 cut(s)	55, 221, 439, 853, 946, 995, 1530, 1570
BstMWI	GCNNNNNNNGC	5 cut(s)	196, 786, 1163, 1247, 1349
BstNI	CCWGG	2 cut(s)	1202, 1244
BstNSI	RCATGY	3 cut(s)	104, 529, 1161
BstSCI	CCNGG	5 cut(s)	459, 698, 1200, 1242, 1451
BstUI	CGCG	1 cut(s)	297
BstV1I	GCAGC	6 cut(s)	133, 764, 1091, 1294, 1352, 1696
BstV2I	GAAGAC	2 cut(s)	1514, 1704
BstX2I	RGATCY	5 cut(s)	55, 221, 995, 1530, 1570
BstYI	RGATCY	5 cut(s)	55, 221, 995, 1530, 1570
BsuI	GTATCC	1 cut(s)	542
BsuRI	GGCC	1 cut(s)	1632
BtgZI	GCGATG	1 cut(s)	1176
BtsCI	GGATG	6 cut(s)	632, 678, 1098, 1132, 1324, 1701
BtsI	GCAGTG	1 cut(s)	1236
BtsIMutI	CAGTG	7 cut(s)	244, 828, 886, 1054, 1236, 1395, 1581
Cac8I	GCNNGC	5 cut(s)	201, 1159, 1297, 1350, 1630
CciI	TCATGA	2 cut(s)	156, 1606
CfoI	GCGC	2 cut(s)	134, 1434
Cfr13I	GGNCC	4 cut(s)	457, 1127, 1587, 1715
CseI	GACGC	1 cut(s)	286
Csp6I	GTAC	6 cut(s)	104, 865, 1096, 1175, 1216, 1336
CviQI	GTAC	6 cut(s)	104, 865, 1096, 1175, 1216, 1336
DdeI	CTNAG	3 cut(s)	318, 546, 1353
DpnI	GATC	8 cut(s)	57, 223, 441, 855, 948, 997, 1532, 1572
DpnII	GATC	8 cut(s)	55, 221, 439, 853, 946, 995, 1530, 1570
DrdI	GACNNNNNNGTC	1 cut(s)	296
DseDI	GACNNNNNNGTC	1 cut(s)	296
Eam1104I	CTCTTC	1 cut(s)	1254
EarI	CTCTTC	1 cut(s)	1254
Ecl136II	GAGCTC	1 cut(s)	190
Eco130I	CCWWGG	2 cut(s)	495, 682
Eco24I	GRGCYC	1 cut(s)	192
Eco31I	GGTCTC	1 cut(s)	8
Eco47I	GGWCC	4 cut(s)	457, 1127, 1587, 1715
Eco53kI	GAGCTC	1 cut(s)	190
Eco57I	CTGAAG	4 cut(s)	1278, 1533, 1542, 1716
Eco88I	CYCGRG	1 cut(s)	1074
EcoICRI	GAGCTC	1 cut(s)	190
EcoO109I	RGGNCCY	1 cut(s)	457
EcoRI	GAATTC	2 cut(s)	412, 575
EcoRII	CCWGG	2 cut(s)	1200, 1242
EcoT14I	CCWWGG	2 cut(s)	495, 682
EcoT22I	ATGCAT	1 cut(s)	1168
EcoT38I	GRGCYC	1 cut(s)	192
ErhI	CCWWGG	2 cut(s)	495, 682
FaqI	GGGAC	2 cut(s)	470, 1701
FauI	CCCGC	1 cut(s)	190
Fnu4HI	GCNGC	6 cut(s)	147, 778, 1080, 1308, 1341, 1710
FokI	GGATG	6 cut(s)	619, 665, 1085, 1119, 1311, 1688
FriOI	GRGCYC	1 cut(s)	192
Fsp4HI	GCNGC	6 cut(s)	147, 778, 1080, 1308, 1341, 1710
FspBI	CTAG	6 cut(s)	642, 663, 1004, 1032, 1536, 1726
GlaI	GCGC	2 cut(s)	133, 1433
GluI	GCNGC	6 cut(s)	147, 778, 1080, 1308, 1341, 1710
GsuI	CTGGAG	1 cut(s)	575
HaeIII	GGCC	1 cut(s)	1632
HapII	CCGG	3 cut(s)	461, 699, 1453
HgaI	GACGC	1 cut(s)	286
HhaI	GCGC	2 cut(s)	134, 1434
Hin6I	GCGC	2 cut(s)	132, 1432
HinP1I	GCGC	2 cut(s)	132, 1432
HincII	GTYRAC	3 cut(s)	315, 385, 1393
HindII	GTYRAC	3 cut(s)	315, 385, 1393
HinfI	GANTC	3 cut(s)	311, 841, 859
HpaI	GTTAAC	1 cut(s)	1393
HpaII	CCGG	3 cut(s)	461, 699, 1453
HphI	GGTGA	2 cut(s)	23, 339
Hpy166II	GTNNAC	8 cut(s)	96, 315, 347, 385, 436, 1175, 1393, 1579
Hpy188I	TCNGA	6 cut(s)	536, 858, 875, 1137, 1561, 1591
Hpy188III	TCNNGA	7 cut(s)	157, 572, 956, 976, 1489, 1607, 1651
Hpy8I	GTNNAC	8 cut(s)	96, 315, 347, 385, 436, 1175, 1393, 1579
Hpy99I	CGWCG	1 cut(s)	302
HpyAV	CCTTC	4 cut(s)	154, 914, 1264, 1566
HpyCH4III	ACNGT	4 cut(s)	113, 890, 905, 1049
HpyF10VI	GCNNNNNNNGC	5 cut(s)	196, 786, 1163, 1247, 1349
HpyF3I	CTNAG	3 cut(s)	318, 546, 1353
HspAI	GCGC	2 cut(s)	132, 1432
KflI	GGGWCCC	1 cut(s)	457
KspAI	GTTAAC	1 cut(s)	1393
Kzo9I	GATC	8 cut(s)	55, 221, 439, 853, 946, 995, 1530, 1570
LmnI	GCTCC	3 cut(s)	550, 1273, 1482
Lsp1109I	GCAGC	6 cut(s)	133, 764, 1091, 1294, 1352, 1696
LweI	GCATC	6 cut(s)	71, 981, 1153, 1333, 1350, 1456
MaeI	CTAG	6 cut(s)	642, 663, 1004, 1032, 1536, 1726
MaeIII	GTNAC	3 cut(s)	614, 896, 1049
MalI	GATC	8 cut(s)	57, 223, 441, 855, 948, 997, 1532, 1572
MboI	GATC	8 cut(s)	55, 221, 439, 853, 946, 995, 1530, 1570
MboII	GAAGA	8 cut(s)	44, 721, 805, 1150, 1271, 1369, 1519, 1709
MflI	RGATCY	5 cut(s)	55, 221, 995, 1530, 1570
MhlI	GDGCHC	2 cut(s)	192, 888
MluI	ACGCGT	1 cut(s)	295
MlyI	GAGTC	2 cut(s)	320, 835
MmeI	TCCRAC	3 cut(s)	559, 872, 1614
MnlI	CCTC	7 cut(s)	98, 541, 646, 1140, 1255, 1496, 1715
Mph1103I	ATGCAT	1 cut(s)	1168
MroXI	GAANNNNTTC	1 cut(s)	343
MseI	TTAA	6 cut(s)	728, 869, 1196, 1316, 1392, 1437
MslI	CAYNNNNRTG	1 cut(s)	359
MspI	CCGG	3 cut(s)	461, 699, 1453
MspR9I	CCNGG	5 cut(s)	461, 700, 1202, 1244, 1453
Mva1269I	GAATGC	3 cut(s)	41, 985, 1016
MvaI	CCWGG	2 cut(s)	1202, 1244
MvnI	CGCG	1 cut(s)	297
MwoI	GCNNNNNNNGC	5 cut(s)	196, 786, 1163, 1247, 1349
NciI	CCSGG	3 cut(s)	461, 700, 1453
NdeII	GATC	8 cut(s)	55, 221, 439, 853, 946, 995, 1530, 1570
NlaIV	GGNNCC	7 cut(s)	458, 459, 688, 1275, 1484, 1572, 1717
NmeAIII	GCCGAG	2 cut(s)	211, 1271
NmuCI	GTSAC	2 cut(s)	896, 1049
NsiI	ATGCAT	1 cut(s)	1168
NspI	RCATGY	3 cut(s)	104, 529, 1161
PaeI	GCATGC	1 cut(s)	1161
PaeR7I	CTCGAG	1 cut(s)	1074
PagI	TCATGA	2 cut(s)	156, 1606
PciI	ACATGT	1 cut(s)	525
PcsI	WCGNNNNNNNCGW	1 cut(s)	363
PctI	GAATGC	3 cut(s)	41, 985, 1016
PdmI	GAANNNNTTC	1 cut(s)	343
PfeI	GAWTC	1 cut(s)	859
PflMI	CCANNNNNTGG	1 cut(s)	1124
PkrI	GCNGC	6 cut(s)	148, 779, 1081, 1309, 1342, 1711
PleI	GAGTC	2 cut(s)	319, 835
PpsI	GAGTC	2 cut(s)	319, 835
PpuMI	RGGWCCY	1 cut(s)	457
PscI	ACATGT	1 cut(s)	525
PsiI	TTATAA	1 cut(s)	449
Psp124BI	GAGCTC	1 cut(s)	192
Psp5II	RGGWCCY	1 cut(s)	457
Psp6I	CCWGG	2 cut(s)	1200, 1242
PspGI	CCWGG	2 cut(s)	1200, 1242
PspN4I	GGNNCC	7 cut(s)	458, 459, 688, 1275, 1484, 1572, 1717
PspPI	GGNCC	4 cut(s)	457, 1127, 1587, 1715
PspPPI	RGGWCCY	1 cut(s)	457
PspXI	VCTCGAGB	1 cut(s)	1074
PsuI	RGATCY	5 cut(s)	55, 221, 995, 1530, 1570
RsaI	GTAC	6 cut(s)	105, 866, 1097, 1176, 1217, 1337
RsaNI	GTAC	6 cut(s)	104, 865, 1096, 1175, 1216, 1336
RseI	CAYNNNNRTG	1 cut(s)	359
SacI	GAGCTC	1 cut(s)	192
SaqAI	TTAA	6 cut(s)	728, 869, 1196, 1316, 1392, 1437
SatI	GCNGC	6 cut(s)	147, 778, 1080, 1308, 1341, 1710
Sau3AI	GATC	8 cut(s)	55, 221, 439, 853, 946, 995, 1530, 1570
Sau96I	GGNCC	4 cut(s)	457, 1127, 1587, 1715
SchI	GAGTC	2 cut(s)	320, 835
ScrFI	CCNGG	5 cut(s)	461, 700, 1202, 1244, 1453
SduI	GDGCHC	2 cut(s)	192, 888
SfaNI	GCATC	6 cut(s)	71, 981, 1153, 1333, 1350, 1456
Sfr274I	CTCGAG	1 cut(s)	1074
SinI	GGWCC	4 cut(s)	457, 1127, 1587, 1715
SlaI	CTCGAG	1 cut(s)	1074
SmiMI	CAYNNNNRTG	1 cut(s)	359
SmlI	CTYRAG	4 cut(s)	89, 954, 1074, 1526
SmoI	CTYRAG	4 cut(s)	89, 954, 1074, 1526
SphI	GCATGC	1 cut(s)	1161
SsiI	CCGC	3 cut(s)	183, 481, 924
SspMI	CTAG	6 cut(s)	642, 663, 1004, 1032, 1536, 1726
SstI	GAGCTC	1 cut(s)	192
StyD4I	CCNGG	5 cut(s)	459, 698, 1200, 1242, 1451
StyI	CCWWGG	2 cut(s)	495, 682
TaaI	ACNGT	4 cut(s)	113, 890, 905, 1049
TaqI	TCGA	6 cut(s)	357, 911, 918, 1020, 1075, 1650
TatI	WGTACW	2 cut(s)	1095, 1174
TfiI	GAWTC	1 cut(s)	859
Tru1I	TTAA	6 cut(s)	728, 869, 1196, 1316, 1392, 1437
Tru9I	TTAA	6 cut(s)	728, 869, 1196, 1316, 1392, 1437
TscAI	CASTG	7 cut(s)	244, 835, 893, 1054, 1243, 1402, 1581
TseFI	GTSAC	2 cut(s)	896, 1049
TseI	GCWGC	6 cut(s)	146, 777, 1079, 1307, 1340, 1709
Tsp45I	GTSAC	2 cut(s)	896, 1049
TspGWI	ACGGA	1 cut(s)	866
TspRI	CASTG	7 cut(s)	244, 835, 893, 1054, 1243, 1402, 1581
Van91I	CCANNNNNTGG	1 cut(s)	1124
VpaK11BI	GGWCC	4 cut(s)	457, 1127, 1587, 1715
XapI	RAATTY	3 cut(s)	412, 559, 575
XceI	RCATGY	3 cut(s)	104, 529, 1161
XcmI	CCANNNNNNNNNTGG	4 cut(s)	244, 358, 1226, 1581
XhoI	CTCGAG	1 cut(s)	1074
XmnI	GAANNNNTTC	1 cut(s)	343
XspI	CTAG	6 cut(s)	642, 663, 1004, 1032, 1536, 1726
Zsp2I	ATGCAT	1 cut(s)	1168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.