Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0000550

Physical Location & Seq

Genomic Coordinates Reverse (-)

11121740 .. 11127198

Gene Structure 5459 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g18850.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGGCGTCTAACGGTAACGGTAACGGGGAGTTCAGCTTCAACAACGGACCGGCGGCAGTGGCGAACGGGAACGGGACGGCGAGGAACGGACTGGCGAAGATTCAGACGAAGAAGAGCGGGAATGGGATGTGCCACGACGACAGCTCGGCGCCGGTGAAGGCTCAGACGATCGACCAGCTTCATTCTCTGCAGAAGAAGAAGTCGGCACCGACGACGCCGATCAAGGGCACTCAGGGCGCCTTTGCTGTCGCTCTCTCCGAAGAGGAGCGCCAGAAGCAGCAGCTCCAGTCCATCAGTAACTCTCTGGCGTCGCTGACGAGAGAGACTGGACCAAAGGTTGTGAGAGGAGACCCGGCGAACCAGTCTGAGACGCCGAAGGTGTCATCACACGTGGAGCACCACCATCATTTCACTCCCACCATCAGCGTCAGTGACAGTGCCCTCAAGTTCACTCATGTCCTCTACAACCTCTCTCCTGCTGAGCTATATGAGCAGGCGATAAAATACGAAAAGGGATCGTTCATAACGTCAACAGGCGCATTAGCAACACTTTCTGGAGCCAAGACCGGTCGGTCTCCAAGAGATAAGCGCGTTGTCAAGGATGAGACTACAGAGAACGAGCTCTGGTGGGGAAGGGGTTCACCAAACATTGAAATGGACGAGCACACTTTCATGGTCAACAGGGAAAGAGCTGTGGATTACTTGAACTCTTTGGACAAGGTGTTTGTAAATGATCAGTTCTTGAACTGGGATCCAGAAAACAGAATTAAAGTGCGGATTGTCTCTGCCAGGGCTTATCATTCTTTGTTCATGCACAACATGTGTATCCGACCCAGTCCTGAAGAGCTGGAGAATTTTGGTACTCCGGACTTCACTATTTACAATGCTGGTCAGTTCCCGTGTAATCGTTACACCCACTACATGACATCCTCCACTAGCATAGATCTTAATCTTGGTAGGAGGGAAATGGTCATCCTCGGCACCATGTATGCCGGGGAAATGAAGAAAGGTCTTTTCAGTGTCATGCATTATCTTATGCCTAAGCGGCAAATCCTATCCCTACATTCTGGCTGCAATATGGGGAAAGATGGAGATGTTGCACTCTTCTTTGGATTGTCAGGTACTGGGAAGACAACTCTGTCTACTGATCACAATAGATACCTTATTGGAGATGATGAACACTGTTGGACTGAGAACGGTGTATCAAATATAGAAGGTGGTTGCTATGCCAAGTGTATTGATCTTGCGAGGGAGAAAGAACCTGATATTTGGAATGCCATCAAGTTTGGTGCTGTGTTGGAAAATATTGTGTTTGATGAGCATACTCGAGAAGTAGATTACTCTGACAAATCTGTTACAGAGAATACTCGGGCAGCTTACCCTATTGAATACATTCCCAATGCAAAAATACCATGTGTTGGACCTCATCCAAAGAATGTAATACTCTTAGCATGTGATGCATTTGGTGTGCTCCCACCGGTGAGCAAGTTAAACCTTGCACAGACCATGTATCATTTCATCAGCGGCTATACTGCTCTGGTTGCCGGAACTGAAGAGGGCATTAAGGAGCCACAAGCAACATTCTCGGCTTGCTTTGGTGCTGCATTTATAATGTTGCATCCAACGAAGTATGCAGCAATGCTTGCTCAGAAAATGCAGCAACATGGTGCAACTGGATGGCTGGTGAACACTGGCTGGTCTGGTGGAAGGTATGGATCGGGAAAGCGCATTAAGCTACCTTACACCCGGAAAATCATTGATGCCATACACTCTGGCAGCCTCTTGAATGCAAATTACAAGAAGACTGAAGTGTTCGGACTTGAGATTCCCACTGAGATTGAGGGGGTGCCTTCAGAGATACTGGATCCAGTGAACACTTGGTCAGATAAGAAAGCATACCAGGAAACACTGCTCAAGTTGGCTGGCCTATTCAAAAACAACTTCGAGACATTCACAAACTACAAGATTGGCAAGGACAACAAGCTGACTGAAGACATCCTCGCGGCAGGTCCGAACTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004611 GO:0004612 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006006 GO:0006094 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016020 GO:0016036 GO:0016051 GO:0016829 GO:0016830 GO:0016831 GO:0019318 GO:0019319 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0042221 GO:0042594 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046364 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0071496 GO:0071704 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PEPCK_ATP

Protein Analysis

674

Amino Acids

74.35

Weight (kDa)

6.9

Isoelectric Point (pI)

36.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPCK_ATP	PF01293	11 - 470	6.1e-212	Phosphoenolpyruvate carboxykinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca	FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica	MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica	Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis	pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis	RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata	RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora	Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii	Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa	Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha	Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana	Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1610
AasI	GACNNNNNNGTC	2 cut(s)	571, 1138
Acc36I	ACCTGC	1 cut(s)	1997
AccB1I	GGYRCC	5 cut(s)	148, 205, 236, 980, 1846
AccB7I	CCANNNNNTGG	1 cut(s)	1418
AccBSI	CCGCTC	1 cut(s)	117
AccI	GTMKAC	1 cut(s)	1142
AccII	CGCG	2 cut(s)	591, 2003
AccIII	TCCGGA	1 cut(s)	865
AciI	CCGC	6 cut(s)	53, 117, 775, 1045, 1524, 2003
AclWI	GGATC	6 cut(s)	523, 746, 759, 1723, 1859, 1872
AcsI	RAATTY	1 cut(s)	853
AcuI	CTGAAG	5 cut(s)	861, 1572, 1827, 1836, 2010
AcvI	CACGTG	1 cut(s)	391
AcyI	GRCGYC	6 cut(s)	5, 149, 215, 237, 308, 371
AfaI	GTAC	2 cut(s)	862, 1123
AfiI	CCNNNNNNNGG	2 cut(s)	224, 1418
AflIII	ACRYGT	2 cut(s)	388, 819
AgeI	ACCGGT	2 cut(s)	566, 1477
AgsI	TTSAA	7 cut(s)	40, 653, 706, 745, 1388, 1786, 1933
AjnI	CCWGG	2 cut(s)	788, 1899
Alw21I	GWGCWC	4 cut(s)	399, 624, 666, 1473
Alw26I	GTCTC	7 cut(s)	317, 342, 362, 579, 599, 787, 1940
AlwI	GGATC	6 cut(s)	523, 746, 759, 1723, 1859, 1872
AlwNI	CAGNNNCTG	1 cut(s)	1124
Ama87I	CYCGRG	2 cut(s)	1326, 1368
Aor13HI	TCCGGA	1 cut(s)	865
AoxI	GGCC	1 cut(s)	1924
ApeKI	GCWGC	8 cut(s)	277, 280, 1071, 1373, 1601, 1634, 1657, 1776
ApoI	RAATTY	1 cut(s)	853
ArsI	GACNNNNNNTTYG	2 cut(s)	707, 739
AsiGI	ACCGGT	2 cut(s)	566, 1477
Asp700I	GAANNNNTTC	2 cut(s)	637, 1392
AspLEI	GCGC	6 cut(s)	151, 239, 270, 539, 591, 1728
AspS9I	GGNCC	4 cut(s)	47, 329, 1421, 2009
AsuC2I	CCSGG	3 cut(s)	353, 994, 1747
AsuHPI	GGTGA	4 cut(s)	166, 633, 1492, 1696
AvaI	CYCGRG	2 cut(s)	1326, 1368
AvaII	GGWCC	4 cut(s)	47, 329, 1421, 2009
BaeGI	GKGCMC	2 cut(s)	230, 442
BaeI	ACNNNNGTAYC	2 cut(s)	808, 841
BamHI	GGATCC	2 cut(s)	751, 1864
BanI	GGYRCC	5 cut(s)	148, 205, 236, 980, 1846
BanII	GRGCYC	1 cut(s)	624
BbrPI	CACGTG	1 cut(s)	391
BbsI	GAAGAC	3 cut(s)	1136, 1808, 1998
Bbv12I	GWGCWC	4 cut(s)	399, 624, 666, 1473
BbvI	GCAGC	8 cut(s)	289, 292, 1058, 1385, 1588, 1646, 1669, 1788
BccI	CCATC	6 cut(s)	299, 411, 428, 1082, 1286, 1671
BceAI	ACGGC	1 cut(s)	93
BcgI	CGANNNNNNTGC	2 cut(s)	1566, 1600
BciT130I	CCWGG	2 cut(s)	790, 1901
BciVI	GTATCC	1 cut(s)	836
BclI	TGATCA	2 cut(s)	733, 1147
BcnI	CCSGG	3 cut(s)	353, 994, 1747
BcoDI	GTCTC	7 cut(s)	317, 342, 362, 579, 599, 787, 1940
BfaI	CTAG	2 cut(s)	936, 2020
BfmI	CTRYAG	2 cut(s)	188, 609
BfoI	RGCGCY	3 cut(s)	152, 240, 271
BfuAI	ACCTGC	1 cut(s)	1997
BfuI	GTATCC	1 cut(s)	836
BglI	GCCNNNNNGGC	1 cut(s)	1045
BglII	AGATCT	1 cut(s)	943
BlpI	GCTNAGC	1 cut(s)	480
Bme1390I	CCNGG	5 cut(s)	353, 790, 994, 1747, 1901
Bme18I	GGWCC	4 cut(s)	47, 329, 1421, 2009
BmeT110I	CYCGRG	2 cut(s)	1326, 1368
BmgT120I	GGNCC	4 cut(s)	47, 329, 1421, 2009
BmiI	GGNNCC	9 cut(s)	150, 207, 238, 559, 753, 982, 1569, 1848, 1866
BmrFI	CCNGG	5 cut(s)	353, 790, 994, 1747, 1901
BmrI	ACTGGG	3 cut(s)	757, 828, 1134
BmsI	GCATC	3 cut(s)	1447, 1627, 1750
BmuI	ACTGGG	3 cut(s)	757, 828, 1134
BpiI	GAAGAC	3 cut(s)	1136, 1808, 1998
BpmI	CTGGAG	3 cut(s)	269, 576, 869
Bpu10I	CCTNAGC	1 cut(s)	1041
Bpu1102I	GCTNAGC	1 cut(s)	480
BpuEI	CTTGAG	3 cut(s)	428, 1841, 1898
BpuMI	CCSGG	3 cut(s)	353, 994, 1747
BsaAI	YACGTR	1 cut(s)	391
BsaBI	GATNNNNATC	1 cut(s)	948
BsaHI	GRCGYC	6 cut(s)	5, 149, 215, 237, 308, 371
BsaI	GGTCTC	2 cut(s)	342, 579
BsaJI	CCNNGG	3 cut(s)	789, 976, 993
BsaWI	WCCGGW	3 cut(s)	566, 865, 1477
Bsc4I	CCNNNNNNNGG	2 cut(s)	224, 1418
Bse118I	RCCGGY	4 cut(s)	49, 151, 566, 1477
Bse3DI	GCAATG	1 cut(s)	1644
Bse8I	GATNNNNATC	1 cut(s)	948
BseAI	TCCGGA	1 cut(s)	865
BseBI	CCWGG	2 cut(s)	790, 1901
BseDI	CCNNGG	3 cut(s)	789, 976, 993
BseGI	GGATG	8 cut(s)	132, 607, 926, 972, 1426, 1618, 1682, 1995
BseJI	GATNNNNATC	1 cut(s)	948
BseLI	CCNNNNNNNGG	2 cut(s)	224, 1418
BseMI	GCAATG	1 cut(s)	1644
BseMII	CTCAG	7 cut(s)	176, 245, 357, 471, 1182, 1661, 1824
BseRI	GAGGAG	2 cut(s)	278, 360
BseSI	GKGCMC	2 cut(s)	230, 442
BseXI	GCAGC	8 cut(s)	289, 292, 1058, 1385, 1588, 1646, 1669, 1788
Bsh1236I	CGCG	2 cut(s)	591, 2003
Bsh1285I	CGRYCG	2 cut(s)	171, 571
BshFI	GGCC	1 cut(s)	1926
BshNI	GGYRCC	5 cut(s)	148, 205, 236, 980, 1846
BshTI	ACCGGT	2 cut(s)	566, 1477
BsiEI	CGRYCG	2 cut(s)	171, 571
BsiHKAI	GWGCWC	4 cut(s)	399, 624, 666, 1473
BsiHKCI	CYCGRG	2 cut(s)	1326, 1368
BsiSI	CCGG	9 cut(s)	50, 152, 353, 567, 866, 993, 1478, 1545, 1747
BslFI	GGGAC	1 cut(s)	88
BslI	CCNNNNNNNGG	2 cut(s)	224, 1418
BsmAI	GTCTC	7 cut(s)	317, 342, 362, 579, 599, 787, 1940
BsmBI	CGTCTC	1 cut(s)	362
BsmFI	GGGAC	1 cut(s)	88
BsmI	GAATGC	2 cut(s)	1279, 1792
BsnI	GGCC	1 cut(s)	1926
Bso31I	GGTCTC	2 cut(s)	342, 579
BsoBI	CYCGRG	2 cut(s)	1326, 1368
Bsp1286I	GDGCHC	6 cut(s)	230, 399, 442, 624, 666, 1473
Bsp13I	TCCGGA	1 cut(s)	865
Bsp1720I	GCTNAGC	1 cut(s)	480
BspACI	CCGC	6 cut(s)	53, 117, 775, 1045, 1524, 2003
BspANI	GGCC	1 cut(s)	1926
BspCNI	CTCAG	7 cut(s)	175, 244, 358, 472, 1183, 1660, 1825
BspEI	TCCGGA	1 cut(s)	865
BspFNI	CGCG	2 cut(s)	591, 2003
BspLI	GGNNCC	9 cut(s)	150, 207, 238, 559, 753, 982, 1569, 1848, 1866
BspMAI	CTGCAG	1 cut(s)	192
BspMI	ACCTGC	1 cut(s)	1997
BspPI	GGATC	6 cut(s)	523, 746, 759, 1723, 1859, 1872
BspQI	GCTCTTC	2 cut(s)	107, 837
BspT107I	GGYRCC	5 cut(s)	148, 205, 236, 980, 1846
BspTNI	GGTCTC	2 cut(s)	342, 579
BsrBI	CCGCTC	1 cut(s)	117
BsrDI	GCAATG	1 cut(s)	1644
BsrFI	RCCGGY	4 cut(s)	49, 151, 566, 1477
BssAI	RCCGGY	4 cut(s)	49, 151, 566, 1477
BssECI	CCNNGG	3 cut(s)	789, 976, 993
BssNI	GRCGYC	6 cut(s)	5, 149, 215, 237, 308, 371
Bst2UI	CCWGG	2 cut(s)	790, 1901
Bst4CI	ACNGT	5 cut(s)	14, 20, 437, 1184, 1199
Bst6I	CTCTTC	5 cut(s)	107, 255, 837, 1109, 1548
BstACI	GRCGYC	6 cut(s)	5, 149, 215, 237, 308, 371
BstAPI	GCANNNNNTGC	2 cut(s)	1457, 1643
BstBAI	YACGTR	1 cut(s)	391
BstC8I	GCNNGC	4 cut(s)	495, 1591, 1644, 1924
BstDEI	CTNAG	9 cut(s)	162, 231, 366, 480, 1041, 1191, 1447, 1647, 1833
BstF5I	GGATG	8 cut(s)	132, 607, 926, 972, 1426, 1618, 1682, 1995
BstFNI	CGCG	2 cut(s)	591, 2003
BstH2I	RGCGCY	3 cut(s)	152, 240, 271
BstHHI	GCGC	6 cut(s)	151, 239, 270, 539, 591, 1728
BstMAI	GTCTC	7 cut(s)	317, 342, 362, 579, 599, 787, 1940
BstMCI	CGRYCG	2 cut(s)	171, 571
BstMWI	GCNNNNNNNGC	9 cut(s)	59, 234, 274, 490, 1045, 1457, 1541, 1643, 1732
BstNI	CCWGG	2 cut(s)	790, 1901
BstNSI	RCATGY	2 cut(s)	823, 1455
BstSCI	CCNGG	5 cut(s)	351, 788, 992, 1745, 1899
BstSFI	CTRYAG	2 cut(s)	188, 609
BstSLI	GKGCMC	2 cut(s)	230, 442
BstUI	CGCG	2 cut(s)	591, 2003
BstV1I	GCAGC	8 cut(s)	289, 292, 1058, 1385, 1588, 1646, 1669, 1788
BstV2I	GAAGAC	3 cut(s)	1136, 1808, 1998
BstX2I	RGATCY	3 cut(s)	751, 943, 1864
BstYI	RGATCY	3 cut(s)	751, 943, 1864
BsuI	GTATCC	1 cut(s)	836
BsuRI	GGCC	1 cut(s)	1926
BtsCI	GGATG	8 cut(s)	132, 607, 926, 972, 1426, 1618, 1682, 1995
BtsI	GCAGTG	2 cut(s)	63, 1907
BtsIMutI	CAGTG	9 cut(s)	63, 436, 442, 1024, 1180, 1689, 1830, 1875, 1907
BveI	ACCTGC	1 cut(s)	1997
Cac8I	GCNNGC	4 cut(s)	495, 1591, 1644, 1924
CaiI	CAGNNNCTG	1 cut(s)	1124
CfoI	GCGC	6 cut(s)	151, 239, 270, 539, 591, 1728
Cfr10I	RCCGGY	4 cut(s)	49, 151, 566, 1477
Cfr13I	GGNCC	4 cut(s)	47, 329, 1421, 2009
CpoI	CGGWCCG	1 cut(s)	47
CseI	GACGC	4 cut(s)	223, 297, 379, 415
Csp6I	GTAC	2 cut(s)	861, 1122
CspAI	ACCGGT	2 cut(s)	566, 1477
CspCI	CAANNNNNGTGG	2 cut(s)	1819, 1854
CspI	CGGWCCG	1 cut(s)	47
CviQI	GTAC	2 cut(s)	861, 1122
DdeI	CTNAG	9 cut(s)	162, 231, 366, 480, 1041, 1191, 1447, 1647, 1833
DinI	GGCGCC	2 cut(s)	150, 238
DrdI	GACNNNNNNGTC	2 cut(s)	571, 1138
DseDI	GACNNNNNNGTC	2 cut(s)	571, 1138
Eam1104I	CTCTTC	5 cut(s)	107, 255, 837, 1109, 1548
EarI	CTCTTC	5 cut(s)	107, 255, 837, 1109, 1548
Ecl136II	GAGCTC	1 cut(s)	622
Eco24I	GRGCYC	1 cut(s)	624
Eco31I	GGTCTC	2 cut(s)	342, 579
Eco47I	GGWCC	4 cut(s)	47, 329, 1421, 2009
Eco53kI	GAGCTC	1 cut(s)	622
Eco57I	CTGAAG	5 cut(s)	861, 1572, 1827, 1836, 2010
Eco72I	CACGTG	1 cut(s)	391
Eco88I	CYCGRG	2 cut(s)	1326, 1368
EcoICRI	GAGCTC	1 cut(s)	622
EcoRII	CCWGG	2 cut(s)	788, 1899
EcoT22I	ATGCAT	2 cut(s)	1029, 1462
EcoT38I	GRGCYC	1 cut(s)	624
EgeI	GGCGCC	2 cut(s)	150, 238
EheI	GGCGCC	2 cut(s)	150, 238
Esp3I	CGTCTC	1 cut(s)	362
FaqI	GGGAC	1 cut(s)	88
FauI	CCCGC	1 cut(s)	110
FbaI	TGATCA	2 cut(s)	733, 1147
FblI	GTMKAC	1 cut(s)	1142
FokI	GGATG	8 cut(s)	139, 614, 913, 959, 1413, 1605, 1689, 1982
FriOI	GRGCYC	1 cut(s)	624
FspBI	CTAG	2 cut(s)	936, 2020
GlaI	GCGC	6 cut(s)	150, 238, 269, 538, 590, 1727
GsuI	CTGGAG	3 cut(s)	269, 576, 869
HaeII	RGCGCY	3 cut(s)	152, 240, 271
HaeIII	GGCC	1 cut(s)	1926
HapII	CCGG	9 cut(s)	50, 152, 353, 567, 866, 993, 1478, 1545, 1747
HgaI	GACGC	4 cut(s)	223, 297, 379, 415
HhaI	GCGC	6 cut(s)	151, 239, 270, 539, 591, 1728
Hin1I	GRCGYC	6 cut(s)	5, 149, 215, 237, 308, 371
Hin6I	GCGC	6 cut(s)	149, 237, 268, 537, 589, 1726
HinP1I	GCGC	6 cut(s)	149, 237, 268, 537, 589, 1726
HincII	GTYRAC	2 cut(s)	531, 679
HindII	GTYRAC	2 cut(s)	531, 679
HinfI	GANTC	2 cut(s)	100, 1825
HpaII	CCGG	9 cut(s)	50, 152, 353, 567, 866, 993, 1478, 1545, 1747
HphI	GGTGA	4 cut(s)	166, 633, 1492, 1696
Hpy166II	GTNNAC	7 cut(s)	450, 531, 641, 679, 1143, 1687, 1873
Hpy188III	TCNNGA	9 cut(s)	555, 742, 755, 839, 866, 1328, 1719, 1783, 1945
Hpy8I	GTNNAC	7 cut(s)	450, 531, 641, 679, 1143, 1687, 1873
Hpy99I	CGWCG	4 cut(s)	140, 214, 217, 313
HpyAV	CCTTC	6 cut(s)	151, 370, 627, 1208, 1701, 1860
HpyCH4III	ACNGT	5 cut(s)	14, 20, 437, 1184, 1199
HpyCH4IV	ACGT	2 cut(s)	390, 527
HpyF10VI	GCNNNNNNNGC	9 cut(s)	59, 234, 274, 490, 1045, 1457, 1541, 1643, 1732
HpyF3I	CTNAG	9 cut(s)	162, 231, 366, 480, 1041, 1191, 1447, 1647, 1833
HpySE526I	ACGT	2 cut(s)	390, 527
Hsp92I	GRCGYC	6 cut(s)	5, 149, 215, 237, 308, 371
HspAI	GCGC	6 cut(s)	149, 237, 268, 537, 589, 1726
KasI	GGCGCC	2 cut(s)	148, 236
Kpn2I	TCCGGA	1 cut(s)	865
Ksp22I	TGATCA	2 cut(s)	733, 1147
LguI	GCTCTTC	2 cut(s)	107, 837
LmnI	GCTCC	6 cut(s)	265, 288, 394, 557, 1476, 1567
Lsp1109I	GCAGC	8 cut(s)	289, 292, 1058, 1385, 1588, 1646, 1669, 1788
LweI	GCATC	3 cut(s)	1447, 1627, 1750
MaeI	CTAG	2 cut(s)	936, 2020
MaeII	ACGT	2 cut(s)	390, 527
MaeIII	GTNAC	6 cut(s)	14, 20, 296, 431, 908, 1354
MbiI	CCGCTC	1 cut(s)	117
MflI	RGATCY	3 cut(s)	751, 943, 1864
MhlI	GDGCHC	6 cut(s)	230, 399, 442, 624, 666, 1473
MluCI	AATT	3 cut(s)	765, 853, 1792
Mly113I	GGCGCC	2 cut(s)	149, 237
MmeI	TCCRAC	5 cut(s)	853, 1166, 1278, 1399, 1646
Mph1103I	ATGCAT	2 cut(s)	1029, 1462
MroI	TCCGGA	1 cut(s)	865
MroXI	GAANNNNTTC	2 cut(s)	637, 1392
MseI	TTAA	5 cut(s)	768, 948, 1490, 1563, 1731
MslI	CAYNNNNRTG	2 cut(s)	653, 671
MspA1I	CMGCKG	1 cut(s)	1524
MspI	CCGG	9 cut(s)	50, 152, 353, 567, 866, 993, 1478, 1545, 1747
MspR9I	CCNGG	5 cut(s)	353, 790, 994, 1747, 1901
Mva1269I	GAATGC	2 cut(s)	1279, 1792
MvaI	CCWGG	2 cut(s)	790, 1901
MvnI	CGCG	2 cut(s)	591, 2003
MwoI	GCNNNNNNNGC	9 cut(s)	59, 234, 274, 490, 1045, 1457, 1541, 1643, 1732
NarI	GGCGCC	2 cut(s)	149, 237
NciI	CCSGG	3 cut(s)	353, 994, 1747
NlaIV	GGNNCC	9 cut(s)	150, 207, 238, 559, 753, 982, 1569, 1848, 1866
NmeAIII	GCCGAG	3 cut(s)	125, 957, 1565
NmuCI	GTSAC	1 cut(s)	431
NsiI	ATGCAT	2 cut(s)	1029, 1462
NspI	RCATGY	2 cut(s)	823, 1455
PaeR7I	CTCGAG	1 cut(s)	1326
PciI	ACATGT	1 cut(s)	819
PciSI	GCTCTTC	2 cut(s)	107, 837
PcsI	WCGNNNNNNNCGW	3 cut(s)	209, 255, 524
PctI	GAATGC	2 cut(s)	1279, 1792
PdmI	GAANNNNTTC	2 cut(s)	637, 1392
PfeI	GAWTC	2 cut(s)	100, 1825
PflFI	GACNNNGTC	1 cut(s)	834
PflMI	CCANNNNNTGG	1 cut(s)	1418
PinAI	ACCGGT	2 cut(s)	566, 1477
Ple19I	CGATCG	1 cut(s)	171
PluTI	GGCGCC	2 cut(s)	152, 240
PmaCI	CACGTG	1 cut(s)	391
PmlI	CACGTG	1 cut(s)	391
Ppu21I	YACGTR	1 cut(s)	391
PscI	ACATGT	1 cut(s)	819
PsiI	TTATAA	1 cut(s)	1610
Psp124BI	GAGCTC	1 cut(s)	624
Psp6I	CCWGG	2 cut(s)	788, 1899
PspCI	CACGTG	1 cut(s)	391
PspGI	CCWGG	2 cut(s)	788, 1899
PspN4I	GGNNCC	9 cut(s)	150, 207, 238, 559, 753, 982, 1569, 1848, 1866
PspPI	GGNCC	4 cut(s)	47, 329, 1421, 2009
PstI	CTGCAG	1 cut(s)	192
PstNI	CAGNNNCTG	1 cut(s)	1124
PsuI	RGATCY	3 cut(s)	751, 943, 1864
PsyI	GACNNNGTC	1 cut(s)	834
PvuI	CGATCG	1 cut(s)	171
RsaI	GTAC	2 cut(s)	862, 1123
RsaNI	GTAC	2 cut(s)	861, 1122
RseI	CAYNNNNRTG	2 cut(s)	653, 671
Rsr2I	CGGWCCG	1 cut(s)	47
RsrII	CGGWCCG	1 cut(s)	47
SacI	GAGCTC	1 cut(s)	624
SapI	GCTCTTC	2 cut(s)	107, 837
SaqAI	TTAA	5 cut(s)	768, 948, 1490, 1563, 1731
Sau96I	GGNCC	4 cut(s)	47, 329, 1421, 2009
ScrFI	CCNGG	5 cut(s)	353, 790, 994, 1747, 1901
SduI	GDGCHC	6 cut(s)	230, 399, 442, 624, 666, 1473
SfaNI	GCATC	3 cut(s)	1447, 1627, 1750
SfcI	CTRYAG	2 cut(s)	188, 609
SfoI	GGCGCC	2 cut(s)	150, 238
Sfr274I	CTCGAG	1 cut(s)	1326
SgrAI	CRCCGGYG	2 cut(s)	151, 1477
SinI	GGWCC	4 cut(s)	47, 329, 1421, 2009
SlaI	CTCGAG	1 cut(s)	1326
SmiMI	CAYNNNNRTG	2 cut(s)	653, 671
SmlI	CTYRAG	4 cut(s)	443, 1326, 1820, 1913
SmoI	CTYRAG	4 cut(s)	443, 1326, 1820, 1913
Sse9I	AATT	3 cut(s)	765, 853, 1792
SsiI	CCGC	6 cut(s)	53, 117, 775, 1045, 1524, 2003
SspDI	GGCGCC	2 cut(s)	148, 236
SspI	AATATT	1 cut(s)	1306
SspMI	CTAG	2 cut(s)	936, 2020
SstI	GAGCTC	1 cut(s)	624
StyD4I	CCNGG	5 cut(s)	351, 788, 992, 1745, 1899
TaaI	ACNGT	5 cut(s)	14, 20, 437, 1184, 1199
TaiI	ACGT	2 cut(s)	393, 530
TaqI	TCGA	3 cut(s)	171, 1327, 1944
TaqII	GACCGA	1 cut(s)	561
TasI	AATT	3 cut(s)	765, 853, 1792
TauI	GCSGC	4 cut(s)	56, 1048, 1527, 2006
TfiI	GAWTC	2 cut(s)	100, 1825
Tru1I	TTAA	5 cut(s)	768, 948, 1490, 1563, 1731
Tru9I	TTAA	5 cut(s)	768, 948, 1490, 1563, 1731
TscAI	CASTG	9 cut(s)	63, 436, 442, 1024, 1187, 1696, 1837, 1875, 1914
TseFI	GTSAC	1 cut(s)	431
TseI	GCWGC	8 cut(s)	277, 280, 1071, 1373, 1601, 1634, 1657, 1776
Tsp45I	GTSAC	1 cut(s)	431
TspDTI	ATGAA	7 cut(s)	170, 511, 661, 799, 1016, 1191, 1507
TspGWI	ACGGA	2 cut(s)	60, 102
TspRI	CASTG	9 cut(s)	63, 436, 442, 1024, 1187, 1696, 1837, 1875, 1914
Tth111I	GACNNNGTC	1 cut(s)	834
Van91I	CCANNNNNTGG	1 cut(s)	1418
VpaK11BI	GGWCC	4 cut(s)	47, 329, 1421, 2009
XapI	RAATTY	1 cut(s)	853
XceI	RCATGY	2 cut(s)	823, 1455
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1875
XhoI	CTCGAG	1 cut(s)	1326
XmiI	GTMKAC	1 cut(s)	1142
XmnI	GAANNNNTTC	2 cut(s)	637, 1392
XspI	CTAG	2 cut(s)	936, 2020
Zsp2I	ATGCAT	2 cut(s)	1029, 1462

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.