Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000550

Physical Location & Seq

Genomic Coordinates Forward (+)

71494072 .. 71499722

Gene Structure 5651 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00134000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGGCGTCTAACGGTGACGGAGATTTCAGCTTCACGACTGGGAACGGCCCGGCGGCGGTGAGGAACGGCAACGGAGCGGCGAGGAACGGGCTGGCGAAGATCCATACGACGCCGAAGAACGGGAATGGGGTGTGCCACGACGACAGCTCGGCGACGGTGAAGGCTCAGACCATCGACCAGCTTCATTCGCTGCAGAAGAAGAAGTCGGCACCGACGACACCCATCAAGGGCACTCAGGGCGACTTTGCTGTCGCTCTCTCCGACGAGGAACGCCAGATGCAGCAGCTCCAGTCCATCAGTAACTCTCTGGCGTCGCTGACGAGAGGGACTGGACCAAAGGTTGTGAGAGGAGACCCAGCCCAGCAGTCTCCTCATCATACCCCGAAGGTGTCATCGCACCACCATCATTTCACTCCCACCATCAGCGTCAGTGACAGTGCCCTCAAGTTCACCCATGTCCTCTACAACCTCTCTCCTGCTGAGCTATATGAGCAGGCGATAATTAATGAAAAGGGGTCGTTCGTTACGTCAACAGGCGCATTAGCAACACTTTCTGGAGCCAAGACAGGTCGGTCTCCAAGAGATAAACGCGTCGTCAAGGATGAGACCACAGAAGAGGAGCTTTGGTGGGGAAGGGGTTCACCAAACATTGAAATGGACGAGCACACTTTCATGGTCAACAGGGAAAGAGCTGTGGATTACCTGAATTCTTTGGACAAGGTCTTTGTAAATGACCAATACTTGAACTGGGATCCAGAAAACAGAATCAAAGTGCGGATTGTCTCTGCCAGGGCTTATCATTCTTTGTTCATGCACAACATGTGTATCCGACCCAGTCCTGAAGAGCTGGAGAATTTTGGTACTCCGGACTTCACTATTTACAATGCTGGTCAGTTCCCGTGTAATCGTTACACGCACTATATGACATCCTCCACTAGCATAGATCTTAATCTTGGTAGGAGGGAAATGGTCATCCTCGGCACCATGTATGCCGGGGAAATGAAGAAAGGCCTTTTCAGTCTCATGCATTATCTCATGCCTAAGCGACAAATCCTATCCCTACATTCTGGCTGCAATATGGGGAAAGATGGAGATGTTGCACTGTTCTTTGGATTGTCAGGTACTGGGAAGACAACTCTGTCTACTGATCACAATAGATACCTAATTGGAGATGATGAACACTGTTGGACTGAGAATGGTGTATCAAATATCGAAGGTGGTTGCTATGCCAAGTGTATTGATCTCTCGAGGGAGAAAGAACCTGACATTTGGAATGCCATCAAGTTTGGTGCTGTGTTGGAAAATGTTGTGTTTGATGAGCATACTCGAGAAGTGGATTATTCTGACAAATCTGTTACAGAGAATACTCGGGCAGCCTACCCCATTGAGTACATTCCCAATGCAAAAATACCATGTGTTGGTCCTCATCCGAAGAATGTGATACTTTTGGCATGTGATGCATTTGGTGTGCTCCCACCTGTGAGCAAGTTAAACCTGGCACAGACCATGTACCATTTCATCAGTGGCTATACTGCACTGGTTGCTGGAACTGAAGAGGGCATTAAGGAGCCACAGGCAACATTCTCGGCTTGCTTTGGTGCTGCATTTATAATGTTGCATCCAACGAAGTATGCAGCAATGCTTGCTCAGAAAATGCAGCAGCATGGTGCAACTGGATGGCTGGTCAACACTGGCTGGTCTGGTGGAAGGTATGGATCGGGAAAGCGCATTAAGCTACCCTACACCAGGAAAATCATTGATGCCATACACTCTGGCAGCCTCTTGAATGCAAATTACAAGAAGACCGAAGTGTTTGGACTTGAGATCCCCACTGAGATTGAGGGAGTGCCTTCAGAAATACTGGATCCAGTGAACACTTGGTCGGACAAGAATGCATACCAGGAAACACTCCTGAAGTTGGCTGGTCTATTTAAGAACAACTTTGAGACTTTCACAAACTACAAGATTGGCAAGGACAACAAGCTGACTGAAGAAATTCTCGCTGCTGGTCCGAATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004611 GO:0004612 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006006 GO:0006094 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016020 GO:0016036 GO:0016051 GO:0016829 GO:0016830 GO:0016831 GO:0019318 GO:0019319 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0042221 GO:0042594 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046364 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0071496 GO:0071704 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PEPCK_ATP

Protein Analysis

673

Amino Acids

74.26

Weight (kDa)

6.57

Isoelectric Point (pI)

36.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPCK_ATP	PF01293	152 - 619	2.5e-214	Phosphoenolpyruvate carboxykinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca	FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica	MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica	Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis	pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis	RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata	RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora	Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii	Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa	Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha	Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana	Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1610
AasI	GACNNNNNNGTC	3 cut(s)	248, 571, 1138
AccB1I	GGYRCC	2 cut(s)	208, 980
AccB7I	CCANNNNNTGG	1 cut(s)	1418
AccBSI	CCGCTC	1 cut(s)	77
AccI	GTMKAC	1 cut(s)	1142
AccII	CGCG	1 cut(s)	591
AccIII	TCCGGA	1 cut(s)	865
AciI	CCGC	4 cut(s)	53, 56, 77, 775
AclWI	GGATC	7 cut(s)	94, 746, 759, 1723, 1819, 1859, 1872
AcsI	RAATTY	4 cut(s)	706, 853, 1995, 2014
AcuI	CTGAAG	5 cut(s)	861, 1572, 1836, 1934, 2010
AcyI	GRCGYC	3 cut(s)	5, 110, 311
AfaI	GTAC	4 cut(s)	862, 1123, 1391, 1511
AfiI	CCNNNNNNNGG	6 cut(s)	55, 119, 227, 1418, 1746, 1918
AflIII	ACRYGT	2 cut(s)	589, 819
AgsI	TTSAA	3 cut(s)	653, 745, 1786
AjnI	CCWGG	4 cut(s)	788, 1494, 1745, 1899
Alw21I	GWGCWC	2 cut(s)	666, 1473
Alw26I	GTCTC	7 cut(s)	345, 372, 579, 599, 787, 1025, 1940
AlwI	GGATC	7 cut(s)	94, 746, 759, 1723, 1819, 1859, 1872
AlwNI	CAGNNNCTG	1 cut(s)	1124
Ama87I	CYCGRG	3 cut(s)	1246, 1326, 1368
Aor13HI	TCCGGA	1 cut(s)	865
AoxI	GGCC	2 cut(s)	46, 1009
ApoI	RAATTY	4 cut(s)	706, 853, 1995, 2014
ArsI	GACNNNNNNTTYG	2 cut(s)	707, 739
AseI	ATTAAT	1 cut(s)	504
Asp700I	GAANNNNTTC	2 cut(s)	637, 1995
AspLEI	GCGC	2 cut(s)	539, 1728
AspS9I	GGNCC	4 cut(s)	47, 332, 1421, 2009
AsuC2I	CCSGG	2 cut(s)	50, 994
AsuHPI	GGTGA	5 cut(s)	26, 70, 169, 442, 633
AvaI	CYCGRG	3 cut(s)	1246, 1326, 1368
AvaII	GGWCC	3 cut(s)	332, 1421, 2009
BaeGI	GKGCMC	2 cut(s)	233, 442
BaeI	ACNNNNGTAYC	2 cut(s)	808, 841
BamHI	GGATCC	2 cut(s)	751, 1864
BanI	GGYRCC	2 cut(s)	208, 980
BbsI	GAAGAC	2 cut(s)	1136, 1808
Bbv12I	GWGCWC	2 cut(s)	666, 1473
BccI	CCATC	8 cut(s)	179, 230, 302, 411, 428, 1082, 1286, 1671
BceAI	ACGGC	2 cut(s)	61, 82
BcgI	CGANNNNNNTGC	2 cut(s)	1566, 1600
BciT130I	CCWGG	4 cut(s)	790, 1496, 1747, 1901
BciVI	GTATCC	1 cut(s)	836
BclI	TGATCA	1 cut(s)	1147
BcnI	CCSGG	2 cut(s)	50, 994
BcoDI	GTCTC	7 cut(s)	345, 372, 579, 599, 787, 1025, 1940
BfaI	CTAG	2 cut(s)	936, 2020
BfmI	CTRYAG	1 cut(s)	191
BfuI	GTATCC	1 cut(s)	836
BglII	AGATCT	1 cut(s)	943
BlpI	GCTNAGC	1 cut(s)	480
Bme1390I	CCNGG	6 cut(s)	50, 790, 994, 1496, 1747, 1901
Bme18I	GGWCC	3 cut(s)	332, 1421, 2009
BmeT110I	CYCGRG	3 cut(s)	1246, 1326, 1368
BmgT120I	GGNCC	4 cut(s)	47, 332, 1421, 2009
BmiI	GGNNCC	6 cut(s)	210, 559, 753, 982, 1569, 1866
BmrFI	CCNGG	6 cut(s)	50, 790, 994, 1496, 1747, 1901
BmrI	ACTGGG	4 cut(s)	48, 757, 828, 1134
BmsI	GCATC	4 cut(s)	267, 1447, 1627, 1750
BmuI	ACTGGG	4 cut(s)	48, 757, 828, 1134
BpiI	GAAGAC	2 cut(s)	1136, 1808
BpmI	CTGGAG	3 cut(s)	272, 576, 869
Bpu10I	CCTNAGC	1 cut(s)	1041
Bpu1102I	GCTNAGC	1 cut(s)	480
BpuEI	CTTGAG	2 cut(s)	428, 1841
BpuMI	CCSGG	2 cut(s)	50, 994
BsaBI	GATNNNNATC	1 cut(s)	948
BsaHI	GRCGYC	3 cut(s)	5, 110, 311
BsaI	GGTCTC	3 cut(s)	345, 579, 599
BsaJI	CCNNGG	3 cut(s)	789, 976, 993
BsaWI	WCCGGW	1 cut(s)	865
BsaXI	ACNNNNNCTCC	2 cut(s)	611, 641
Bsc4I	CCNNNNNNNGG	6 cut(s)	55, 119, 227, 1418, 1746, 1918
Bse3DI	GCAATG	1 cut(s)	1644
Bse8I	GATNNNNATC	1 cut(s)	948
BseAI	TCCGGA	1 cut(s)	865
BseBI	CCWGG	4 cut(s)	790, 1496, 1747, 1901
BseDI	CCNNGG	3 cut(s)	789, 976, 993
BseGI	GGATG	6 cut(s)	607, 926, 972, 1426, 1618, 1682
BseJI	GATNNNNATC	1 cut(s)	948
BseLI	CCNNNNNNNGG	6 cut(s)	55, 119, 227, 1418, 1746, 1918
BseMI	GCAATG	1 cut(s)	1644
BseMII	CTCAG	6 cut(s)	179, 248, 471, 1182, 1661, 1824
BseRI	GAGGAG	3 cut(s)	360, 363, 632
BseSI	GKGCMC	2 cut(s)	233, 442
BseYI	CCCAGC	2 cut(s)	355, 360
BsgI	GTGCAG	1 cut(s)	1518
Bsh1236I	CGCG	1 cut(s)	591
BshFI	GGCC	2 cut(s)	48, 1011
BshNI	GGYRCC	2 cut(s)	208, 980
BsiHKAI	GWGCWC	2 cut(s)	666, 1473
BsiHKCI	CYCGRG	3 cut(s)	1246, 1326, 1368
BsiSI	CCGG	3 cut(s)	50, 866, 993
BslFI	GGGAC	1 cut(s)	340
BslI	CCNNNNNNNGG	6 cut(s)	55, 119, 227, 1418, 1746, 1918
BsmAI	GTCTC	7 cut(s)	345, 372, 579, 599, 787, 1025, 1940
BsmFI	GGGAC	1 cut(s)	340
BsmI	GAATGC	3 cut(s)	1279, 1792, 1897
BsnI	GGCC	2 cut(s)	48, 1011
Bso31I	GGTCTC	3 cut(s)	345, 579, 599
BsoBI	CYCGRG	3 cut(s)	1246, 1326, 1368
Bsp1286I	GDGCHC	4 cut(s)	233, 442, 666, 1473
Bsp13I	TCCGGA	1 cut(s)	865
Bsp143I	GATC	8 cut(s)	99, 751, 943, 1147, 1240, 1715, 1824, 1864
Bsp1720I	GCTNAGC	1 cut(s)	480
BspACI	CCGC	4 cut(s)	53, 56, 77, 775
BspANI	GGCC	2 cut(s)	48, 1011
BspCNI	CTCAG	6 cut(s)	178, 247, 472, 1183, 1660, 1825
BspEI	TCCGGA	1 cut(s)	865
BspFNI	CGCG	1 cut(s)	591
BspLI	GGNNCC	6 cut(s)	210, 559, 753, 982, 1569, 1866
BspMAI	CTGCAG	1 cut(s)	195
BspPI	GGATC	7 cut(s)	94, 746, 759, 1723, 1819, 1859, 1872
BspQI	GCTCTTC	1 cut(s)	837
BspT107I	GGYRCC	2 cut(s)	208, 980
BspTNI	GGTCTC	3 cut(s)	345, 579, 599
BsrBI	CCGCTC	1 cut(s)	77
BsrDI	GCAATG	1 cut(s)	1644
BssECI	CCNNGG	3 cut(s)	789, 976, 993
BssMI	GATC	8 cut(s)	99, 751, 943, 1147, 1240, 1715, 1824, 1864
BssNI	GRCGYC	3 cut(s)	5, 110, 311
Bst2UI	CCWGG	4 cut(s)	790, 1496, 1747, 1901
Bst4CI	ACNGT	5 cut(s)	14, 157, 437, 1104, 1184
Bst6I	CTCTTC	3 cut(s)	609, 837, 1548
BstACI	GRCGYC	3 cut(s)	5, 110, 311
BstAPI	GCANNNNNTGC	3 cut(s)	1457, 1541, 1643
BstC8I	GCNNGC	4 cut(s)	93, 495, 1591, 1644
BstDEI	CTNAG	7 cut(s)	165, 234, 480, 1041, 1191, 1647, 1833
BstENI	CCTNNNNNAGG	1 cut(s)	1744
BstF5I	GGATG	6 cut(s)	607, 926, 972, 1426, 1618, 1682
BstFNI	CGCG	1 cut(s)	591
BstHHI	GCGC	2 cut(s)	539, 1728
BstKTI	GATC	8 cut(s)	102, 754, 946, 1150, 1243, 1718, 1827, 1867
BstMAI	GTCTC	7 cut(s)	345, 372, 579, 599, 787, 1025, 1940
BstMBI	GATC	8 cut(s)	99, 751, 943, 1147, 1240, 1715, 1824, 1864
BstMWI	GCNNNNNNNGC	7 cut(s)	187, 237, 490, 1457, 1541, 1643, 1732
BstNI	CCWGG	4 cut(s)	790, 1496, 1747, 1901
BstNSI	RCATGY	2 cut(s)	823, 1455
BstSCI	CCNGG	6 cut(s)	48, 788, 992, 1494, 1745, 1899
BstSFI	CTRYAG	1 cut(s)	191
BstSLI	GKGCMC	2 cut(s)	233, 442
BstUI	CGCG	1 cut(s)	591
BstV2I	GAAGAC	2 cut(s)	1136, 1808
BstX2I	RGATCY	5 cut(s)	99, 751, 943, 1824, 1864
BstYI	RGATCY	5 cut(s)	99, 751, 943, 1824, 1864
BsuI	GTATCC	1 cut(s)	836
BsuRI	GGCC	2 cut(s)	48, 1011
BtgZI	GCGATG	1 cut(s)	378
BtsCI	GGATG	6 cut(s)	607, 926, 972, 1426, 1618, 1682
BtsIMutI	CAGTG	9 cut(s)	436, 442, 1100, 1180, 1528, 1535, 1689, 1830, 1875
Cac8I	GCNNGC	4 cut(s)	93, 495, 1591, 1644
CaiI	CAGNNNCTG	1 cut(s)	1124
CfoI	GCGC	2 cut(s)	539, 1728
Cfr13I	GGNCC	4 cut(s)	47, 332, 1421, 2009
CseI	GACGC	4 cut(s)	118, 300, 415, 580
Csp6I	GTAC	4 cut(s)	861, 1122, 1390, 1510
CspCI	CAANNNNNGTGG	2 cut(s)	1819, 1854
CviQI	GTAC	4 cut(s)	861, 1122, 1390, 1510
DdeI	CTNAG	7 cut(s)	165, 234, 480, 1041, 1191, 1647, 1833
DpnI	GATC	8 cut(s)	101, 753, 945, 1149, 1242, 1717, 1826, 1866
DpnII	GATC	8 cut(s)	99, 751, 943, 1147, 1240, 1715, 1824, 1864
DrdI	GACNNNNNNGTC	3 cut(s)	248, 571, 1138
DseDI	GACNNNNNNGTC	3 cut(s)	248, 571, 1138
Eam1104I	CTCTTC	3 cut(s)	609, 837, 1548
EarI	CTCTTC	3 cut(s)	609, 837, 1548
Eco147I	AGGCCT	1 cut(s)	1011
Eco31I	GGTCTC	3 cut(s)	345, 579, 599
Eco47I	GGWCC	3 cut(s)	332, 1421, 2009
Eco57I	CTGAAG	5 cut(s)	861, 1572, 1836, 1934, 2010
Eco88I	CYCGRG	3 cut(s)	1246, 1326, 1368
EcoNI	CCTNNNNNAGG	1 cut(s)	1744
EcoRI	GAATTC	1 cut(s)	706
EcoRII	CCWGG	4 cut(s)	788, 1494, 1745, 1899
EcoT22I	ATGCAT	3 cut(s)	1029, 1462, 1897
FalI	AAGNNNNNCTT	4 cut(s)	606, 638, 1925, 1957
FaqI	GGGAC	1 cut(s)	340
FbaI	TGATCA	1 cut(s)	1147
FblI	GTMKAC	1 cut(s)	1142
FokI	GGATG	6 cut(s)	614, 913, 959, 1413, 1605, 1689
FspBI	CTAG	2 cut(s)	936, 2020
GlaI	GCGC	2 cut(s)	538, 1727
GsaI	CCCAGC	2 cut(s)	359, 364
GsuI	CTGGAG	3 cut(s)	272, 576, 869
HaeIII	GGCC	2 cut(s)	48, 1011
HapII	CCGG	3 cut(s)	50, 866, 993
HgaI	GACGC	4 cut(s)	118, 300, 415, 580
HhaI	GCGC	2 cut(s)	539, 1728
Hin1I	GRCGYC	3 cut(s)	5, 110, 311
Hin6I	GCGC	2 cut(s)	537, 1726
HinP1I	GCGC	2 cut(s)	537, 1726
HincII	GTYRAC	3 cut(s)	531, 679, 1687
HindII	GTYRAC	3 cut(s)	531, 679, 1687
HinfI	GANTC	1 cut(s)	765
HpaII	CCGG	3 cut(s)	50, 866, 993
HphI	GGTGA	5 cut(s)	26, 70, 169, 442, 633
Hpy166II	GTNNAC	7 cut(s)	450, 531, 641, 679, 1143, 1687, 1873
Hpy188I	TCNGA	9 cut(s)	168, 262, 830, 1345, 1431, 1650, 1855, 1885, 2013
Hpy8I	GTNNAC	7 cut(s)	450, 531, 641, 679, 1143, 1687, 1873
Hpy99I	CGWCG	7 cut(s)	112, 143, 157, 217, 266, 316, 596
HpyAV	CCTTC	6 cut(s)	154, 379, 627, 1208, 1701, 1860
HpyCH4III	ACNGT	5 cut(s)	14, 157, 437, 1104, 1184
HpyCH4IV	ACGT	1 cut(s)	527
HpyF10VI	GCNNNNNNNGC	7 cut(s)	187, 237, 490, 1457, 1541, 1643, 1732
HpyF3I	CTNAG	7 cut(s)	165, 234, 480, 1041, 1191, 1647, 1833
HpySE526I	ACGT	1 cut(s)	527
Hsp92I	GRCGYC	3 cut(s)	5, 110, 311
HspAI	GCGC	2 cut(s)	537, 1726
Kpn2I	TCCGGA	1 cut(s)	865
Ksp22I	TGATCA	1 cut(s)	1147
Kzo9I	GATC	8 cut(s)	99, 751, 943, 1147, 1240, 1715, 1824, 1864
LguI	GCTCTTC	1 cut(s)	837
LmnI	GCTCC	6 cut(s)	74, 291, 557, 619, 1476, 1567
LweI	GCATC	4 cut(s)	267, 1447, 1627, 1750
MaeI	CTAG	2 cut(s)	936, 2020
MaeII	ACGT	1 cut(s)	527
MaeIII	GTNAC	6 cut(s)	14, 299, 431, 523, 908, 1354
MalI	GATC	8 cut(s)	101, 753, 945, 1149, 1242, 1717, 1826, 1866
MbiI	CCGCTC	1 cut(s)	77
MboI	GATC	8 cut(s)	99, 751, 943, 1147, 1240, 1715, 1824, 1864
MflI	RGATCY	5 cut(s)	99, 751, 943, 1824, 1864
MhlI	GDGCHC	4 cut(s)	233, 442, 666, 1473
MluCI	AATT	7 cut(s)	501, 706, 853, 1164, 1792, 1995, 2014
MluI	ACGCGT	1 cut(s)	589
MmeI	TCCRAC	6 cut(s)	285, 853, 1166, 1278, 1646, 1863
Mph1103I	ATGCAT	3 cut(s)	1029, 1462, 1897
MroI	TCCGGA	1 cut(s)	865
MroXI	GAANNNNTTC	2 cut(s)	637, 1995
MseI	TTAA	6 cut(s)	504, 948, 1490, 1563, 1731, 1932
MslI	CAYNNNNRTG	2 cut(s)	653, 671
MspI	CCGG	3 cut(s)	50, 866, 993
MspR9I	CCNGG	6 cut(s)	50, 790, 994, 1496, 1747, 1901
Mva1269I	GAATGC	3 cut(s)	1279, 1792, 1897
MvaI	CCWGG	4 cut(s)	790, 1496, 1747, 1901
MvnI	CGCG	1 cut(s)	591
MwoI	GCNNNNNNNGC	7 cut(s)	187, 237, 490, 1457, 1541, 1643, 1732
NciI	CCSGG	2 cut(s)	50, 994
NdeII	GATC	8 cut(s)	99, 751, 943, 1147, 1240, 1715, 1824, 1864
NlaIV	GGNNCC	6 cut(s)	210, 559, 753, 982, 1569, 1866
NmeAIII	GCCGAG	3 cut(s)	128, 957, 1565
NmuCI	GTSAC	2 cut(s)	14, 431
NsiI	ATGCAT	3 cut(s)	1029, 1462, 1897
NspI	RCATGY	2 cut(s)	823, 1455
PaeR7I	CTCGAG	2 cut(s)	1246, 1326
PceI	AGGCCT	1 cut(s)	1011
PciI	ACATGT	1 cut(s)	819
PciSI	GCTCTTC	1 cut(s)	837
PcsI	WCGNNNNNNNCGW	3 cut(s)	212, 258, 524
PctI	GAATGC	3 cut(s)	1279, 1792, 1897
PdmI	GAANNNNTTC	2 cut(s)	637, 1995
PfeI	GAWTC	1 cut(s)	765
PflFI	GACNNNGTC	2 cut(s)	719, 834
PflMI	CCANNNNNTGG	1 cut(s)	1418
PscI	ACATGT	1 cut(s)	819
PshBI	ATTAAT	1 cut(s)	504
PsiI	TTATAA	1 cut(s)	1610
Psp6I	CCWGG	4 cut(s)	788, 1494, 1745, 1899
PspFI	CCCAGC	2 cut(s)	355, 360
PspGI	CCWGG	4 cut(s)	788, 1494, 1745, 1899
PspN4I	GGNNCC	6 cut(s)	210, 559, 753, 982, 1569, 1866
PspPI	GGNCC	4 cut(s)	47, 332, 1421, 2009
PstI	CTGCAG	1 cut(s)	195
PstNI	CAGNNNCTG	1 cut(s)	1124
PsuI	RGATCY	5 cut(s)	99, 751, 943, 1824, 1864
PsyI	GACNNNGTC	2 cut(s)	719, 834
RsaI	GTAC	4 cut(s)	862, 1123, 1391, 1511
RsaNI	GTAC	4 cut(s)	861, 1122, 1390, 1510
RseI	CAYNNNNRTG	2 cut(s)	653, 671
SapI	GCTCTTC	1 cut(s)	837
SaqAI	TTAA	6 cut(s)	504, 948, 1490, 1563, 1731, 1932
Sau3AI	GATC	8 cut(s)	99, 751, 943, 1147, 1240, 1715, 1824, 1864
Sau96I	GGNCC	4 cut(s)	47, 332, 1421, 2009
ScrFI	CCNGG	6 cut(s)	50, 790, 994, 1496, 1747, 1901
SduI	GDGCHC	4 cut(s)	233, 442, 666, 1473
SfaNI	GCATC	4 cut(s)	267, 1447, 1627, 1750
SfcI	CTRYAG	1 cut(s)	191
Sfr274I	CTCGAG	2 cut(s)	1246, 1326
SinI	GGWCC	3 cut(s)	332, 1421, 2009
SlaI	CTCGAG	2 cut(s)	1246, 1326
SmiMI	CAYNNNNRTG	2 cut(s)	653, 671
SmlI	CTYRAG	4 cut(s)	443, 1246, 1326, 1820
SmoI	CTYRAG	4 cut(s)	443, 1246, 1326, 1820
Sse9I	AATT	7 cut(s)	501, 706, 853, 1164, 1792, 1995, 2014
SseBI	AGGCCT	1 cut(s)	1011
SsiI	CCGC	4 cut(s)	53, 56, 77, 775
SspMI	CTAG	2 cut(s)	936, 2020
StuI	AGGCCT	1 cut(s)	1011
StyD4I	CCNGG	6 cut(s)	48, 788, 992, 1494, 1745, 1899
TaaI	ACNGT	5 cut(s)	14, 157, 437, 1104, 1184
TaiI	ACGT	1 cut(s)	530
TaqI	TCGA	4 cut(s)	174, 1212, 1247, 1327
TaqII	GACCGA	2 cut(s)	561, 1820
TasI	AATT	7 cut(s)	501, 706, 853, 1164, 1792, 1995, 2014
TatI	WGTACW	1 cut(s)	1389
TauI	GCSGC	2 cut(s)	56, 80
TfiI	GAWTC	1 cut(s)	765
Tru1I	TTAA	6 cut(s)	504, 948, 1490, 1563, 1731, 1932
Tru9I	TTAA	6 cut(s)	504, 948, 1490, 1563, 1731, 1932
TscAI	CASTG	9 cut(s)	436, 442, 1107, 1187, 1528, 1542, 1696, 1837, 1875
TseFI	GTSAC	2 cut(s)	14, 431
Tsp45I	GTSAC	2 cut(s)	14, 431
TspDTI	ATGAA	7 cut(s)	173, 522, 661, 799, 1016, 1191, 1507
TspGWI	ACGGA	2 cut(s)	33, 87
TspRI	CASTG	9 cut(s)	436, 442, 1107, 1187, 1528, 1542, 1696, 1837, 1875
Tth111I	GACNNNGTC	2 cut(s)	719, 834
Van91I	CCANNNNNTGG	1 cut(s)	1418
VpaK11BI	GGWCC	3 cut(s)	332, 1421, 2009
VspI	ATTAAT	1 cut(s)	504
XagI	CCTNNNNNAGG	1 cut(s)	1744
XapI	RAATTY	4 cut(s)	706, 853, 1995, 2014
XceI	RCATGY	2 cut(s)	823, 1455
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1520, 1875
XhoI	CTCGAG	2 cut(s)	1246, 1326
XmiI	GTMKAC	1 cut(s)	1142
XmnI	GAANNNNTTC	2 cut(s)	637, 1995
XspI	CTAG	2 cut(s)	936, 2020
Zsp2I	ATGCAT	3 cut(s)	1029, 1462, 1897

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.