Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000550

Physical Location & Seq

Genomic Coordinates Reverse (-)

21825053 .. 21830449

Gene Structure 5397 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG214700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

ATGGCGTCTAACGGTGACGGAGATTTCAGCTTCGCGACTGGGAACGGCCCGGCGGCGGTGACGAACGGCAATGGAGCGGCGAGGAACGGGCTGGCGAAGATCCATACGACGCCGAAGAACGGGAATGGGGTGTGCCACGACGACAGCTCTGCTACGGTGAAGGCTCAGACCATCGACCAGCTTCATTCGCTGCAGAAGAAGAAGTCGGCACCGACGACACCCATCAAGGGCACTCAGGGAGACTTTGCTGTCGCTCTCTCCGAGGAGGAACGCCAGATGCAGCAGCTCCAGTCCATCAGTAACTCTCTGGCGTCGCTGACGAGAGGGACTGGACCAAAGGTTGTGAGAGGAGACCCTGCTCAGCAGTCTCCCCATCATACCCCGAAGGTGTCATCGCACCACCATCATTTCACTCCCACCATCAGCGTCAGTGACAGTGCCCTCAAGTTCACCCATGTCCTCTACAACCTCTCTCCTGCTGAGCTATATGAGCAGGCGATAAATAATGAAAAGGGGTCGTTCGTTACGTCAACAGGCGCATTAGCAACACTTTCTGGAGCCAAGACAGGTCGGTCTCCAAGAGATAAACGCGTCGTCAAGGATGAGACCACAGAAGAGGAGCTTTGGTGGGGAAGGGGTTCACCAAACATTGAAATGGACGAGCACACTTTCATGGTCAACAGGGAAAGAGCTGTGGATTACCTGAATTCTTTGGACAAGGTCTTTGTAAATGACCAATACTTGAACTGGGATCCAGAAAACAGAATCAAAGTGCGGATTGTCTCTGCCAGGGCTTATCATTCTTTGTTCATGCACAACATGTGTATCCGACCCAGTCCTGAAGAGCTGGAGAATTTTGGTACTCCGGACTTCACTATTTACAATGCTGGTCAGTTCCCGTGTAATCGTTACACCCACTATATGACATCCTCCACTAGCATAGATCTTAATCTTGGTAGGAGGGAAATGGTCATCCTCGGCACCATGTATGCCGGGGAAATGAAGAAAGGCCTTTTCAGTCTCATGCATTATCTCATGCCTAAGCGACAAATCCTATCCCTACATTCTGGCTGCAATATGGGGAAAGATGGAGATGTTGCACTGTTCTTTGGATTGTCAGGTACTGGGAAGACAACTCTGTCTACTGATCACAATAGATACCTAATTGGAGATGATGAACACTGTTGGACTGAGAATGGTGTATCAAATATCGAAGGTGGTTGCTATGCCAAGTGTATTGATCTCTCGAGGGAGAAAGAACCTGACATTTGGAATGCCATCAAGTTTGGTGCTGTGTTGGAAAATGTTGTGTTTGATGAGCATACTCGAGAAGTGGATTATTCTGACAAATCTGTTACAGGTAAATATCAATTGTTTATTCATCTAAGAATTAGTCCTTTGTGTTTGAATAACCAGATTTTGATCTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004611 GO:0004612 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006006 GO:0006094 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016020 GO:0016036 GO:0016051 GO:0016829 GO:0016830 GO:0016831 GO:0019318 GO:0019319 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0042221 GO:0042594 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046364 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0071496 GO:0071704 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PEPCK_ATP

Protein Analysis

476

Amino Acids

52.78

Weight (kDa)

6.37

Isoelectric Point (pI)

37.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPCK_ATP	PF01293	152 - 454	6.7e-127	Phosphoenolpyruvate carboxykinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca	FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica	MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica	Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis	pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis	RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata	RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora	Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii	Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa	Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha	Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana	Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1429
AasI	GACNNNNNNGTC	3 cut(s)	248, 571, 1138
AccB1I	GGYRCC	2 cut(s)	208, 980
AccBSI	CCGCTC	1 cut(s)	77
AccI	GTMKAC	1 cut(s)	1142
AccII	CGCG	2 cut(s)	35, 591
AccIII	TCCGGA	1 cut(s)	865
AciI	CCGC	4 cut(s)	53, 56, 77, 775
AclWI	GGATC	3 cut(s)	94, 746, 759
AcsI	RAATTY	2 cut(s)	706, 853
AcuI	CTGAAG	1 cut(s)	861
AcyI	GRCGYC	3 cut(s)	5, 110, 311
AfaI	GTAC	2 cut(s)	862, 1123
AfiI	CCNNNNNNNGG	3 cut(s)	55, 119, 227
AflIII	ACRYGT	2 cut(s)	589, 819
AgsI	TTSAA	3 cut(s)	653, 745, 1408
AjnI	CCWGG	1 cut(s)	788
AluBI	AGCT	8 cut(s)	30, 147, 181, 286, 484, 622, 692, 847
AluI	AGCT	8 cut(s)	30, 147, 181, 286, 484, 622, 692, 847
Alw21I	GWGCWC	1 cut(s)	666
Alw26I	GTCTC	7 cut(s)	234, 345, 372, 579, 599, 787, 1025
AlwI	GGATC	3 cut(s)	94, 746, 759
AlwNI	CAGNNNCTG	1 cut(s)	1124
Ama87I	CYCGRG	2 cut(s)	1246, 1326
Aor13HI	TCCGGA	1 cut(s)	865
AoxI	GGCC	2 cut(s)	46, 1009
ApeKI	GCWGC	4 cut(s)	190, 280, 283, 1071
ApoI	RAATTY	2 cut(s)	706, 853
ArsI	GACNNNNNNTTYG	2 cut(s)	707, 739
Asp700I	GAANNNNTTC	1 cut(s)	637
AspLEI	GCGC	1 cut(s)	539
AspS9I	GGNCC	2 cut(s)	47, 332
AsuC2I	CCSGG	2 cut(s)	50, 994
AsuHPI	GGTGA	5 cut(s)	26, 70, 169, 442, 633
AvaI	CYCGRG	2 cut(s)	1246, 1326
AvaII	GGWCC	1 cut(s)	332
BaeGI	GKGCMC	2 cut(s)	233, 442
BaeI	ACNNNNGTAYC	2 cut(s)	808, 841
BamHI	GGATCC	1 cut(s)	751
BanI	GGYRCC	2 cut(s)	208, 980
BbsI	GAAGAC	1 cut(s)	1136
Bbv12I	GWGCWC	1 cut(s)	666
BbvI	GCAGC	4 cut(s)	177, 292, 295, 1058
BccI	CCATC	8 cut(s)	179, 230, 302, 381, 411, 428, 1082, 1286
BceAI	ACGGC	2 cut(s)	61, 82
BcgI	CGANNNNNNTGC	2 cut(s)	131, 165
BciT130I	CCWGG	1 cut(s)	790
BciVI	GTATCC	1 cut(s)	836
BclI	TGATCA	1 cut(s)	1147
BcnI	CCSGG	2 cut(s)	50, 994
BcoDI	GTCTC	7 cut(s)	234, 345, 372, 579, 599, 787, 1025
BfaI	CTAG	1 cut(s)	936
BfmI	CTRYAG	1 cut(s)	191
BfuI	GTATCC	1 cut(s)	836
BglII	AGATCT	1 cut(s)	943
BisI	GCNGC	6 cut(s)	54, 78, 191, 281, 284, 1072
BlpI	GCTNAGC	2 cut(s)	360, 480
BlsI	GCNGC	6 cut(s)	55, 79, 192, 282, 285, 1073
Bme1390I	CCNGG	3 cut(s)	50, 790, 994
Bme18I	GGWCC	1 cut(s)	332
BmeT110I	CYCGRG	2 cut(s)	1246, 1326
BmgT120I	GGNCC	2 cut(s)	47, 332
BmiI	GGNNCC	4 cut(s)	210, 559, 753, 982
BmrFI	CCNGG	3 cut(s)	50, 790, 994
BmrI	ACTGGG	4 cut(s)	48, 757, 828, 1134
BmsI	GCATC	1 cut(s)	267
BmuI	ACTGGG	4 cut(s)	48, 757, 828, 1134
BpiI	GAAGAC	1 cut(s)	1136
BpmI	CTGGAG	3 cut(s)	272, 576, 869
Bpu10I	CCTNAGC	1 cut(s)	1041
Bpu1102I	GCTNAGC	2 cut(s)	360, 480
BpuEI	CTTGAG	1 cut(s)	428
BpuMI	CCSGG	2 cut(s)	50, 994
BsaBI	GATNNNNATC	2 cut(s)	948, 1421
BsaHI	GRCGYC	3 cut(s)	5, 110, 311
BsaI	GGTCTC	3 cut(s)	345, 579, 599
BsaJI	CCNNGG	4 cut(s)	261, 789, 976, 993
BsaWI	WCCGGW	1 cut(s)	865
BsaXI	ACNNNNNCTCC	2 cut(s)	611, 641
Bsc4I	CCNNNNNNNGG	3 cut(s)	55, 119, 227
Bse1I	ACTGG	6 cut(s)	43, 289, 334, 752, 834, 1129
Bse3DI	GCAATG	1 cut(s)	76
Bse8I	GATNNNNATC	2 cut(s)	948, 1421
BseAI	TCCGGA	1 cut(s)	865
BseBI	CCWGG	1 cut(s)	790
BseDI	CCNNGG	4 cut(s)	261, 789, 976, 993
BseGI	GGATG	3 cut(s)	607, 926, 972
BseJI	GATNNNNATC	2 cut(s)	948, 1421
BseLI	CCNNNNNNNGG	3 cut(s)	55, 119, 227
BseMI	GCAATG	1 cut(s)	76
BseMII	CTCAG	5 cut(s)	179, 248, 374, 471, 1182
BseNI	ACTGG	6 cut(s)	43, 289, 334, 752, 834, 1129
BseRI	GAGGAG	3 cut(s)	278, 363, 632
BseSI	GKGCMC	2 cut(s)	233, 442
BseXI	GCAGC	4 cut(s)	177, 292, 295, 1058
Bsh1236I	CGCG	2 cut(s)	35, 591
BshFI	GGCC	2 cut(s)	48, 1011
BshNI	GGYRCC	2 cut(s)	208, 980
BsiHKAI	GWGCWC	1 cut(s)	666
BsiHKCI	CYCGRG	2 cut(s)	1246, 1326
BsiSI	CCGG	3 cut(s)	50, 866, 993
BslFI	GGGAC	1 cut(s)	340
BslI	CCNNNNNNNGG	3 cut(s)	55, 119, 227
BsmAI	GTCTC	7 cut(s)	234, 345, 372, 579, 599, 787, 1025
BsmFI	GGGAC	1 cut(s)	340
BsmI	GAATGC	1 cut(s)	1279
BsnI	GGCC	2 cut(s)	48, 1011
Bso31I	GGTCTC	3 cut(s)	345, 579, 599
BsoBI	CYCGRG	2 cut(s)	1246, 1326
Bsp1286I	GDGCHC	3 cut(s)	233, 442, 666
Bsp13I	TCCGGA	1 cut(s)	865
Bsp143I	GATC	6 cut(s)	99, 751, 943, 1147, 1240, 1422
Bsp1720I	GCTNAGC	2 cut(s)	360, 480
Bsp68I	TCGCGA	1 cut(s)	35
BspACI	CCGC	4 cut(s)	53, 56, 77, 775
BspANI	GGCC	2 cut(s)	48, 1011
BspCNI	CTCAG	5 cut(s)	178, 247, 373, 472, 1183
BspEI	TCCGGA	1 cut(s)	865
BspFNI	CGCG	2 cut(s)	35, 591
BspLI	GGNNCC	4 cut(s)	210, 559, 753, 982
BspMAI	CTGCAG	1 cut(s)	195
BspPI	GGATC	3 cut(s)	94, 746, 759
BspQI	GCTCTTC	1 cut(s)	837
BspT107I	GGYRCC	2 cut(s)	208, 980
BspTNI	GGTCTC	3 cut(s)	345, 579, 599
BsrBI	CCGCTC	1 cut(s)	77
BsrDI	GCAATG	1 cut(s)	76
BsrI	ACTGG	6 cut(s)	43, 289, 334, 752, 834, 1129
BssECI	CCNNGG	4 cut(s)	261, 789, 976, 993
BssMI	GATC	6 cut(s)	99, 751, 943, 1147, 1240, 1422
BssNI	GRCGYC	3 cut(s)	5, 110, 311
Bst2UI	CCWGG	1 cut(s)	790
Bst4CI	ACNGT	5 cut(s)	14, 157, 437, 1104, 1184
Bst6I	CTCTTC	2 cut(s)	609, 837
BstACI	GRCGYC	3 cut(s)	5, 110, 311
BstC8I	GCNNGC	2 cut(s)	93, 495
BstDEI	CTNAG	7 cut(s)	165, 234, 360, 480, 1041, 1191, 1385
BstF5I	GGATG	3 cut(s)	607, 926, 972
BstFNI	CGCG	2 cut(s)	35, 591
BstHHI	GCGC	1 cut(s)	539
BstKTI	GATC	6 cut(s)	102, 754, 946, 1150, 1243, 1425
BstMAI	GTCTC	7 cut(s)	234, 345, 372, 579, 599, 787, 1025
BstMBI	GATC	6 cut(s)	99, 751, 943, 1147, 1240, 1422
BstMWI	GCNNNNNNNGC	2 cut(s)	187, 490
BstNI	CCWGG	1 cut(s)	790
BstNSI	RCATGY	1 cut(s)	823
BstSCI	CCNGG	3 cut(s)	48, 788, 992
BstSFI	CTRYAG	1 cut(s)	191
BstSLI	GKGCMC	2 cut(s)	233, 442
BstUI	CGCG	2 cut(s)	35, 591
BstV1I	GCAGC	4 cut(s)	177, 292, 295, 1058
BstV2I	GAAGAC	1 cut(s)	1136
BstX2I	RGATCY	3 cut(s)	99, 751, 943
BstYI	RGATCY	3 cut(s)	99, 751, 943
BsuI	GTATCC	1 cut(s)	836
BsuRI	GGCC	2 cut(s)	48, 1011
BtgZI	GCGATG	1 cut(s)	378
BtsCI	GGATG	3 cut(s)	607, 926, 972
BtsIMutI	CAGTG	4 cut(s)	436, 442, 1100, 1180
BtuMI	TCGCGA	1 cut(s)	35
Cac8I	GCNNGC	2 cut(s)	93, 495
CaiI	CAGNNNCTG	1 cut(s)	1124
CfoI	GCGC	1 cut(s)	539
Cfr13I	GGNCC	2 cut(s)	47, 332
CseI	GACGC	4 cut(s)	118, 300, 415, 580
Csp6I	GTAC	2 cut(s)	861, 1122
CviAII	CATG	7 cut(s)	455, 673, 811, 820, 985, 1024, 1036
CviQI	GTAC	2 cut(s)	861, 1122
DdeI	CTNAG	7 cut(s)	165, 234, 360, 480, 1041, 1191, 1385
DpnI	GATC	6 cut(s)	101, 753, 945, 1149, 1242, 1424
DpnII	GATC	6 cut(s)	99, 751, 943, 1147, 1240, 1422
DrdI	GACNNNNNNGTC	3 cut(s)	248, 571, 1138
DseDI	GACNNNNNNGTC	3 cut(s)	248, 571, 1138
Eam1104I	CTCTTC	2 cut(s)	609, 837
EarI	CTCTTC	2 cut(s)	609, 837
Eco147I	AGGCCT	1 cut(s)	1011
Eco31I	GGTCTC	3 cut(s)	345, 579, 599
Eco47I	GGWCC	1 cut(s)	332
Eco57I	CTGAAG	1 cut(s)	861
Eco88I	CYCGRG	2 cut(s)	1246, 1326
EcoRI	GAATTC	1 cut(s)	706
EcoRII	CCWGG	1 cut(s)	788
EcoT22I	ATGCAT	1 cut(s)	1029
FaeI	CATG	7 cut(s)	458, 676, 814, 823, 988, 1027, 1039
FalI	AAGNNNNNCTT	2 cut(s)	606, 638
FaqI	GGGAC	1 cut(s)	340
FatI	CATG	7 cut(s)	454, 672, 810, 819, 984, 1023, 1035
FbaI	TGATCA	1 cut(s)	1147
FblI	GTMKAC	1 cut(s)	1142
Fnu4HI	GCNGC	6 cut(s)	54, 78, 191, 281, 284, 1072
FokI	GGATG	3 cut(s)	614, 913, 959
Fsp4HI	GCNGC	6 cut(s)	54, 78, 191, 281, 284, 1072
FspBI	CTAG	1 cut(s)	936
GlaI	GCGC	1 cut(s)	538
GluI	GCNGC	6 cut(s)	54, 78, 191, 281, 284, 1072
GsuI	CTGGAG	3 cut(s)	272, 576, 869
HaeIII	GGCC	2 cut(s)	48, 1011
HapII	CCGG	3 cut(s)	50, 866, 993
HgaI	GACGC	4 cut(s)	118, 300, 415, 580
HhaI	GCGC	1 cut(s)	539
Hin1I	GRCGYC	3 cut(s)	5, 110, 311
Hin1II	CATG	7 cut(s)	458, 676, 814, 823, 988, 1027, 1039
Hin6I	GCGC	1 cut(s)	537
HinP1I	GCGC	1 cut(s)	537
HincII	GTYRAC	2 cut(s)	531, 679
HindII	GTYRAC	2 cut(s)	531, 679
HinfI	GANTC	1 cut(s)	765
HpaII	CCGG	3 cut(s)	50, 866, 993
HphI	GGTGA	5 cut(s)	26, 70, 169, 442, 633
Hpy166II	GTNNAC	5 cut(s)	450, 531, 641, 679, 1143
Hpy188I	TCNGA	4 cut(s)	168, 262, 830, 1345
Hpy188III	TCNNGA	7 cut(s)	34, 555, 755, 839, 866, 1246, 1328
Hpy8I	GTNNAC	5 cut(s)	450, 531, 641, 679, 1143
Hpy99I	CGWCG	5 cut(s)	112, 143, 217, 316, 596
HpyAV	CCTTC	4 cut(s)	154, 379, 627, 1208
HpyCH4III	ACNGT	5 cut(s)	14, 157, 437, 1104, 1184
HpyCH4IV	ACGT	1 cut(s)	527
HpyCH4V	TGCA	6 cut(s)	193, 280, 814, 1027, 1074, 1100
HpyF10VI	GCNNNNNNNGC	2 cut(s)	187, 490
HpyF3I	CTNAG	7 cut(s)	165, 234, 360, 480, 1041, 1191, 1385
HpySE526I	ACGT	1 cut(s)	527
Hsp92I	GRCGYC	3 cut(s)	5, 110, 311
Hsp92II	CATG	7 cut(s)	458, 676, 814, 823, 988, 1027, 1039
HspAI	GCGC	1 cut(s)	537
Kpn2I	TCCGGA	1 cut(s)	865
Ksp22I	TGATCA	1 cut(s)	1147
Kzo9I	GATC	6 cut(s)	99, 751, 943, 1147, 1240, 1422
LguI	GCTCTTC	1 cut(s)	837
LmnI	GCTCC	4 cut(s)	74, 291, 557, 619
Lsp1109I	GCAGC	4 cut(s)	177, 292, 295, 1058
LweI	GCATC	1 cut(s)	267
MaeI	CTAG	1 cut(s)	936
MaeII	ACGT	1 cut(s)	527
MaeIII	GTNAC	7 cut(s)	14, 58, 299, 431, 523, 908, 1354
MalI	GATC	6 cut(s)	101, 753, 945, 1149, 1242, 1424
MbiI	CCGCTC	1 cut(s)	77
MboI	GATC	6 cut(s)	99, 751, 943, 1147, 1240, 1422
MboII	GAAGA	8 cut(s)	109, 127, 208, 211, 626, 854, 1015, 1141
MfeI	CAATTG	1 cut(s)	1370
MflI	RGATCY	3 cut(s)	99, 751, 943
MhlI	GDGCHC	3 cut(s)	233, 442, 666
MluCI	AATT	5 cut(s)	706, 853, 1164, 1370, 1389
MluI	ACGCGT	1 cut(s)	589
MmeI	TCCRAC	3 cut(s)	853, 1166, 1278
Mph1103I	ATGCAT	1 cut(s)	1029
MroI	TCCGGA	1 cut(s)	865
MroXI	GAANNNNTTC	1 cut(s)	637
MseI	TTAA	1 cut(s)	948
MslI	CAYNNNNRTG	2 cut(s)	653, 671
MspI	CCGG	3 cut(s)	50, 866, 993
MspR9I	CCNGG	3 cut(s)	50, 790, 994
MunI	CAATTG	1 cut(s)	1370
Mva1269I	GAATGC	1 cut(s)	1279
MvaI	CCWGG	1 cut(s)	790
MvnI	CGCG	2 cut(s)	35, 591
MwoI	GCNNNNNNNGC	2 cut(s)	187, 490
NciI	CCSGG	2 cut(s)	50, 994
NdeII	GATC	6 cut(s)	99, 751, 943, 1147, 1240, 1422
NlaIII	CATG	7 cut(s)	458, 676, 814, 823, 988, 1027, 1039
NlaIV	GGNNCC	4 cut(s)	210, 559, 753, 982
NmeAIII	GCCGAG	1 cut(s)	957
NmuCI	GTSAC	3 cut(s)	14, 58, 431
NruI	TCGCGA	1 cut(s)	35
NsiI	ATGCAT	1 cut(s)	1029
NspI	RCATGY	1 cut(s)	823
PaeR7I	CTCGAG	2 cut(s)	1246, 1326
PceI	AGGCCT	1 cut(s)	1011
PciI	ACATGT	1 cut(s)	819
PciSI	GCTCTTC	1 cut(s)	837
PcsI	WCGNNNNNNNCGW	3 cut(s)	212, 258, 524
PctI	GAATGC	1 cut(s)	1279
PdmI	GAANNNNTTC	1 cut(s)	637
PfeI	GAWTC	1 cut(s)	765
PflFI	GACNNNGTC	2 cut(s)	719, 834
PkrI	GCNGC	6 cut(s)	55, 79, 192, 282, 285, 1073
PscI	ACATGT	1 cut(s)	819
PsiI	TTATAA	1 cut(s)	1429
Psp6I	CCWGG	1 cut(s)	788
PspGI	CCWGG	1 cut(s)	788
PspN4I	GGNNCC	4 cut(s)	210, 559, 753, 982
PspPI	GGNCC	2 cut(s)	47, 332
PstI	CTGCAG	1 cut(s)	195
PstNI	CAGNNNCTG	1 cut(s)	1124
PsuI	RGATCY	3 cut(s)	99, 751, 943
PsyI	GACNNNGTC	2 cut(s)	719, 834
RruI	TCGCGA	1 cut(s)	35
RsaI	GTAC	2 cut(s)	862, 1123
RsaNI	GTAC	2 cut(s)	861, 1122
RseI	CAYNNNNRTG	2 cut(s)	653, 671
SapI	GCTCTTC	1 cut(s)	837
SaqAI	TTAA	1 cut(s)	948
SatI	GCNGC	6 cut(s)	54, 78, 191, 281, 284, 1072
Sau3AI	GATC	6 cut(s)	99, 751, 943, 1147, 1240, 1422
Sau96I	GGNCC	2 cut(s)	47, 332
ScrFI	CCNGG	3 cut(s)	50, 790, 994
SduI	GDGCHC	3 cut(s)	233, 442, 666
SfaNI	GCATC	1 cut(s)	267
SfcI	CTRYAG	1 cut(s)	191
Sfr274I	CTCGAG	2 cut(s)	1246, 1326
SinI	GGWCC	1 cut(s)	332
SlaI	CTCGAG	2 cut(s)	1246, 1326
SmiMI	CAYNNNNRTG	2 cut(s)	653, 671
SmlI	CTYRAG	3 cut(s)	443, 1246, 1326
SmoI	CTYRAG	3 cut(s)	443, 1246, 1326
Sse9I	AATT	5 cut(s)	706, 853, 1164, 1370, 1389
SseBI	AGGCCT	1 cut(s)	1011
SsiI	CCGC	4 cut(s)	53, 56, 77, 775
SspMI	CTAG	1 cut(s)	936
StuI	AGGCCT	1 cut(s)	1011
StyD4I	CCNGG	3 cut(s)	48, 788, 992
TaaI	ACNGT	5 cut(s)	14, 157, 437, 1104, 1184
TaiI	ACGT	1 cut(s)	530
TaqI	TCGA	4 cut(s)	174, 1212, 1247, 1327
TaqII	GACCGA	1 cut(s)	561
TasI	AATT	5 cut(s)	706, 853, 1164, 1370, 1389
TauI	GCSGC	2 cut(s)	56, 80
TfiI	GAWTC	1 cut(s)	765
Tru1I	TTAA	1 cut(s)	948
Tru9I	TTAA	1 cut(s)	948
TscAI	CASTG	4 cut(s)	436, 442, 1107, 1187
TseFI	GTSAC	3 cut(s)	14, 58, 431
TseI	GCWGC	4 cut(s)	190, 280, 283, 1071
Tsp45I	GTSAC	3 cut(s)	14, 58, 431
TspDTI	ATGAA	7 cut(s)	173, 522, 661, 799, 1016, 1191, 1370
TspGWI	ACGGA	1 cut(s)	33
TspRI	CASTG	4 cut(s)	436, 442, 1107, 1187
Tth111I	GACNNNGTC	2 cut(s)	719, 834
VpaK11BI	GGWCC	1 cut(s)	332
XapI	RAATTY	2 cut(s)	706, 853
XceI	RCATGY	1 cut(s)	823
XhoI	CTCGAG	2 cut(s)	1246, 1326
XmiI	GTMKAC	1 cut(s)	1142
XmnI	GAANNNNTTC	1 cut(s)	637
XspI	CTAG	1 cut(s)	936
Zsp2I	ATGCAT	1 cut(s)	1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.