Rw5G033400

Phosphoenolpyruvate carboxykinase ATP

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
56729935 .. 56735785
5851 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G033400.1

Sequence Viewer

Length: 1809 bp
ATGGCGTCTAACGGTGACGGAGATTTCAGCTTTGCCACTGGGAACGGCCCGGCGGCGGTGACGAACGGCAACGGAGCGGCGAGGAACGGACTGGCGAAGATCCATACGACGCCGAAGAACGGGAATGGGGTGTGCCACGACGACAGCTCGGCGACGGTGAAGGCTCAGACCATCGACCAGCTTCATTCGCTGCAGAAGAAGAAGTCGGCACCGACGACACCCGTCAAGGGCACTCAGGGAGACTTTGCTGTCGCTCTCTCCGAGGAAACGCCAGATGCAGCAGCTCCAGTCATCAGTAACTCTCTGGCGTCGCTAACGAGAGGGACTGGACCAAAGGTTGTGAGAGGAGACCCTGCTCAGCAGTCTCCTCATCATACCCCAAAGGTGTCATCACACCACCATCATTTCACTCCCACCATCAGCGTCAGTGACAGTGCCCTCAAGTTCACCCATGTCCTGTACAACCTCTCTCCTGCTGAGCTATATGAGCAGGCGATAAATAATGAAAAGGGGTCGTTCGTTACGTCAACAGGCGCATTAGCAACACTTTCTGGAGCCAAGACGGGTCGGTCTCCAAGGGATAAACGCGTCGTCAAGGATGAGACCACAGAAGAGGAGCTTTGGTGGGGAAGGGGTTCACCAAACATTGAAATGGACGAGCACACTTTCATGGTCAACAGGGAAAGAGCTGTGGATTACCTGAATTCTTTGGACAAGGTCTTTGTAAATGACCAATACTTGAACTGGGATCCAGAAAACAGAATCAAAGTGCGGATTGTCTCTGCCAGGGCTTATCATTCTTTGTTCATGCACAACATGTGTATCCGACCCAGTCCTGAAGAGCTGGAGAATTTTGGTACTCCGGACTTCACTATTTACAATGCTGGTCAGTTCCCGTGTAATCGTTACACCCACTATATGACATCCTCCACTAGCATAGATCTTAATCTTGGTAGGAGGGAAATGGTCATCCTCGGCACCATGTATGCCGGGGAAATGAAGAAAGGCCTTTTCAGTCTCATGCATTATCTCATGCCTAAGCGACAAATCCTATCCCTACATTCTGGCTGCAATATGGGGAAAGATGGAGATGTTGCACTGTTCTTTGGATTGTCAGGTACTGGGAAGACAACTCTGTCTACTGATCACAATAGATACCTAATTGGAGATGATGAACACTGTTGGACTGAGAATGGTGTATCAAATATCGAAGGTGGTTGCTATGCCAAGTGTATTGATCTCTCGAGGGAGAAAGAGCCTGACATCTGGAATGCCATCAAGTTTGGTGCTGTGTTGGAAAATGTTGTGTTTGATGAGCATACTCGAGAAGTGGATTATTCTGACAAATCTGTTACAGAAAAAATTTTGAACACAAAAAAAAAAAAAAAAAAACTTTTTCTTCTTCCTTCATCCTCCTCTCCCCAATCTAACTTTGATTTCCATTCACCTCCCTTCGAAACTCCAACTCCTCCAAACCCTAGATTCCCAATCCCCAAACGCTTCTTCCTATACCTCAATCCCACAAATGGACCGGCCGGACTCCTCCTCTTCCAACGACGACGACGATCACCAAAACCTAATCGAAAAGAAAGAGCGCAAGCAAGCCTCTTCTTCTCCCACCTCTCCGTCCCTCTCTCCGATTCGCTCTCTGATAAGCTCCACAAGTCCGAATTACAAGTTCTCTTCTTGCTCCTCCAGCAGCAGCTCGACAATAGGGTCTTATATGCATGCTGTTGTCTGAAGGCTGGGTCAGACAATAGGGGCTTATATGCATTCTGTTGTCTGAAGGCTGGGTCAGACAACATGTAG

Protein Analysis

602

Amino Acids

66.74

Weight (kDa)

8.45

Isoelectric Point (pI)

42.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PEPCK_ATP PF01293 151 - 453 2.9e-127 Phosphoenolpyruvate carboxykinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000550)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 4 cut(s) 248, 568, 1135, 1715
AccB1I GGYRCC 2 cut(s) 208, 977
AccBSI CCGCTC 1 cut(s) 77
AccI GTMKAC 1 cut(s) 1139
AccII CGCG 1 cut(s) 588
AccIII TCCGGA 1 cut(s) 862
AciI CCGC 4 cut(s) 53, 56, 77, 772
AclWI GGATC 3 cut(s) 94, 743, 756
AcoI YGGCCR 1 cut(s) 1533
AcsI RAATTY 3 cut(s) 703, 850, 1362
AcuI CTGAAG 3 cut(s) 858, 1760, 1805
AcyI GRCGYC 3 cut(s) 5, 110, 308
AfaI GTAC 3 cut(s) 461, 859, 1120
AfiI CCNNNNNNNGG 4 cut(s) 55, 119, 227, 1526
AflIII ACRYGT 3 cut(s) 586, 816, 1803
AgsI TTSAA 3 cut(s) 650, 742, 1369
AjnI CCWGG 1 cut(s) 785
AjuI GAANNNNNNNTTGG 2 cut(s) 1487, 1519
Alw21I GWGCWC 1 cut(s) 663
Alw26I GTCTC 7 cut(s) 234, 342, 369, 576, 596, 784, 1022
AlwI GGATC 3 cut(s) 94, 743, 756
AlwNI CAGNNNCTG 1 cut(s) 1121
Ama87I CYCGRG 2 cut(s) 1243, 1323
Aor13HI TCCGGA 1 cut(s) 862
AoxI GGCC 3 cut(s) 46, 1006, 1533
ApeKI GCWGC 6 cut(s) 190, 278, 281, 1068, 1699, 1702
ApoI RAATTY 3 cut(s) 703, 850, 1362
ArsI GACNNNNNNTTYG 2 cut(s) 704, 736
Asp700I GAANNNNTTC 1 cut(s) 634
AspLEI GCGC 2 cut(s) 536, 1597
AspS9I GGNCC 3 cut(s) 47, 329, 1529
AsuC2I CCSGG 2 cut(s) 50, 991
AsuHPI GGTGA 7 cut(s) 26, 70, 169, 439, 630, 1437, 1560
AsuII TTCGAA 1 cut(s) 1455
AvaI CYCGRG 2 cut(s) 1243, 1323
AvaII GGWCC 2 cut(s) 329, 1529
BaeGI GKGCMC 2 cut(s) 233, 439
BaeI ACNNNNGTAYC 2 cut(s) 805, 838
BamHI GGATCC 1 cut(s) 748
BanI GGYRCC 2 cut(s) 208, 977
BbsI GAAGAC 1 cut(s) 1133
Bbv12I GWGCWC 1 cut(s) 663
BbvI GCAGC 6 cut(s) 177, 290, 293, 1055, 1711, 1714
BccI CCATC 5 cut(s) 179, 408, 425, 1079, 1283
BceAI ACGGC 2 cut(s) 61, 82
BciT130I CCWGG 1 cut(s) 787
BciVI GTATCC 1 cut(s) 833
BclI TGATCA 1 cut(s) 1144
BcnI CCSGG 2 cut(s) 50, 991
BcoDI GTCTC 7 cut(s) 234, 342, 369, 576, 596, 784, 1022
BfaI CTAG 2 cut(s) 933, 1479
BfmI CTRYAG 1 cut(s) 191
BfuI GTATCC 1 cut(s) 833
BglII AGATCT 1 cut(s) 940
BisI GCNGC 8 cut(s) 54, 78, 191, 279, 282, 1069, 1700, 1703
BlpI GCTNAGC 2 cut(s) 357, 477
BlsI GCNGC 8 cut(s) 55, 79, 192, 280, 283, 1070, 1701, 1704
Bme1390I CCNGG 3 cut(s) 50, 787, 991
Bme18I GGWCC 2 cut(s) 329, 1529
BmeT110I CYCGRG 2 cut(s) 1243, 1323
BmgT120I GGNCC 3 cut(s) 47, 329, 1529
BmiI GGNNCC 4 cut(s) 210, 556, 750, 979
BmrFI CCNGG 3 cut(s) 50, 787, 991
BmrI ACTGGG 4 cut(s) 48, 754, 825, 1131
BmsI GCATC 1 cut(s) 265
BmuI ACTGGG 4 cut(s) 48, 754, 825, 1131
BoxI GACNNNNGTC 1 cut(s) 221
BpiI GAAGAC 1 cut(s) 1133
BpmI CTGGAG 4 cut(s) 270, 573, 866, 1679
Bpu10I CCTNAGC 1 cut(s) 1038
Bpu1102I GCTNAGC 2 cut(s) 357, 477
Bpu14I TTCGAA 1 cut(s) 1455
BpuEI CTTGAG 1 cut(s) 425
BpuMI CCSGG 2 cut(s) 50, 991
BsaBI GATNNNNATC 1 cut(s) 945
BsaHI GRCGYC 3 cut(s) 5, 110, 308
BsaI GGTCTC 3 cut(s) 342, 576, 596
BsaJI CCNNGG 5 cut(s) 261, 575, 786, 973, 990
BsaWI WCCGGW 1 cut(s) 862
BsaXI ACNNNNNCTCC 4 cut(s) 608, 638, 1450, 1480
Bsc4I CCNNNNNNNGG 4 cut(s) 55, 119, 227, 1526
Bse118I RCCGGY 1 cut(s) 1531
Bse1I ACTGG 7 cut(s) 43, 96, 287, 331, 749, 831, 1126
Bse8I GATNNNNATC 1 cut(s) 945
BseAI TCCGGA 1 cut(s) 862
BseBI CCWGG 1 cut(s) 787
BseDI CCNNGG 5 cut(s) 261, 575, 786, 973, 990
BseGI GGATG 4 cut(s) 604, 923, 969, 1409
BseJI GATNNNNATC 1 cut(s) 945
BseLI CCNNNNNNNGG 4 cut(s) 55, 119, 227, 1526
BseMII CTCAG 5 cut(s) 179, 248, 371, 468, 1179
BseNI ACTGG 7 cut(s) 43, 96, 287, 331, 749, 831, 1126
BseRI GAGGAG 8 cut(s) 357, 360, 629, 1405, 1458, 1532, 1535, 1682
BseSI GKGCMC 2 cut(s) 233, 439
BseX3I CGGCCG 1 cut(s) 1533
BseXI GCAGC 6 cut(s) 177, 290, 293, 1055, 1711, 1714
BseYI CCCAGC 2 cut(s) 1745, 1790
Bsh1236I CGCG 1 cut(s) 588
Bsh1285I CGRYCG 1 cut(s) 1536
BshFI GGCC 3 cut(s) 48, 1008, 1535
BshNI GGYRCC 2 cut(s) 208, 977
BsiEI CGRYCG 1 cut(s) 1536
BsiHKAI GWGCWC 1 cut(s) 663
BsiHKCI CYCGRG 2 cut(s) 1243, 1323
BsiSI CCGG 5 cut(s) 50, 863, 990, 1532, 1536
BslFI GGGAC 2 cut(s) 337, 1613
BslI CCNNNNNNNGG 4 cut(s) 55, 119, 227, 1526
BsmAI GTCTC 7 cut(s) 234, 342, 369, 576, 596, 784, 1022
BsmFI GGGAC 2 cut(s) 337, 1613
BsmI GAATGC 2 cut(s) 1276, 1772
BsnI GGCC 3 cut(s) 48, 1008, 1535
Bso31I GGTCTC 3 cut(s) 342, 576, 596
BsoBI CYCGRG 2 cut(s) 1243, 1323
Bsp119I TTCGAA 1 cut(s) 1455
Bsp1286I GDGCHC 3 cut(s) 233, 439, 663
Bsp13I TCCGGA 1 cut(s) 862
Bsp1407I TGTACA 1 cut(s) 459
Bsp143I GATC 6 cut(s) 99, 748, 940, 1144, 1237, 1565
Bsp1720I GCTNAGC 2 cut(s) 357, 477
BspACI CCGC 4 cut(s) 53, 56, 77, 772
BspANI GGCC 3 cut(s) 48, 1008, 1535
BspCNI CTCAG 5 cut(s) 178, 247, 370, 469, 1180
BspEI TCCGGA 1 cut(s) 862
BspFNI CGCG 1 cut(s) 588
BspLI GGNNCC 4 cut(s) 210, 556, 750, 979
BspMAI CTGCAG 1 cut(s) 195
BspPI GGATC 3 cut(s) 94, 743, 756
BspQI GCTCTTC 1 cut(s) 834
BspT104I TTCGAA 1 cut(s) 1455
BspT107I GGYRCC 2 cut(s) 208, 977
BspTNI GGTCTC 3 cut(s) 342, 576, 596
BsrBI CCGCTC 1 cut(s) 77
BsrFI RCCGGY 1 cut(s) 1531
BsrGI TGTACA 1 cut(s) 459
BsrI ACTGG 7 cut(s) 43, 96, 287, 331, 749, 831, 1126
BssAI RCCGGY 1 cut(s) 1531
BssECI CCNNGG 5 cut(s) 261, 575, 786, 973, 990
BssMI GATC 6 cut(s) 99, 748, 940, 1144, 1237, 1565
BssNI GRCGYC 3 cut(s) 5, 110, 308
BssT1I CCWWGG 1 cut(s) 575
Bst2UI CCWGG 1 cut(s) 787
Bst4CI ACNGT 5 cut(s) 14, 157, 434, 1101, 1181
Bst6I CTCTTC 5 cut(s) 606, 834, 1553, 1613, 1688
BstACI GRCGYC 3 cut(s) 5, 110, 308
BstAUI TGTACA 1 cut(s) 459
BstBI TTCGAA 1 cut(s) 1455
BstC8I GCNNGC 4 cut(s) 492, 1599, 1603, 1729
BstDEI CTNAG 6 cut(s) 165, 234, 357, 477, 1038, 1188
BstF5I GGATG 4 cut(s) 604, 923, 969, 1409
BstFNI CGCG 1 cut(s) 588
BstHHI GCGC 2 cut(s) 536, 1597
BstKTI GATC 6 cut(s) 102, 751, 943, 1147, 1240, 1568
BstMAI GTCTC 7 cut(s) 234, 342, 369, 576, 596, 784, 1022
BstMBI GATC 6 cut(s) 99, 748, 940, 1144, 1237, 1565
BstMCI CGRYCG 1 cut(s) 1536
BstMWI GCNNNNNNNGC 3 cut(s) 187, 487, 1696
BstNI CCWGG 1 cut(s) 787
BstNSI RCATGY 3 cut(s) 820, 1731, 1807
BstPAI GACNNNNGTC 1 cut(s) 221
BstSCI CCNGG 3 cut(s) 48, 785, 989
BstSFI CTRYAG 1 cut(s) 191
BstSLI GKGCMC 2 cut(s) 233, 439
BstUI CGCG 1 cut(s) 588
BstV1I GCAGC 6 cut(s) 177, 290, 293, 1055, 1711, 1714
BstV2I GAAGAC 1 cut(s) 1133
BstX2I RGATCY 3 cut(s) 99, 748, 940
BstYI RGATCY 3 cut(s) 99, 748, 940
BstZI CGGCCG 1 cut(s) 1533
BsuI GTATCC 1 cut(s) 833
BsuRI GGCC 3 cut(s) 48, 1008, 1535
BtsCI GGATG 4 cut(s) 604, 923, 969, 1409
BtsIMutI CAGTG 5 cut(s) 36, 433, 439, 1097, 1177
Cac8I GCNNGC 4 cut(s) 492, 1599, 1603, 1729
CaiI CAGNNNCTG 1 cut(s) 1121
CfoI GCGC 2 cut(s) 536, 1597
Cfr10I RCCGGY 1 cut(s) 1531
Cfr13I GGNCC 3 cut(s) 47, 329, 1529
CseI GACGC 4 cut(s) 118, 297, 412, 577
Csp6I GTAC 3 cut(s) 460, 858, 1119
CviAII CATG 9 cut(s) 452, 670, 808, 817, 982, 1021, 1033, 1728, 1804
CviQI GTAC 3 cut(s) 460, 858, 1119
DdeI CTNAG 6 cut(s) 165, 234, 357, 477, 1038, 1188
DpnI GATC 6 cut(s) 101, 750, 942, 1146, 1239, 1567
DpnII GATC 6 cut(s) 99, 748, 940, 1144, 1237, 1565
DrdI GACNNNNNNGTC 4 cut(s) 248, 568, 1135, 1715
DseDI GACNNNNNNGTC 4 cut(s) 248, 568, 1135, 1715
EaeI YGGCCR 1 cut(s) 1533
EagI CGGCCG 1 cut(s) 1533
Eam1104I CTCTTC 5 cut(s) 606, 834, 1553, 1613, 1688
EarI CTCTTC 5 cut(s) 606, 834, 1553, 1613, 1688
EclXI CGGCCG 1 cut(s) 1533
Eco130I CCWWGG 1 cut(s) 575
Eco147I AGGCCT 1 cut(s) 1008
Eco31I GGTCTC 3 cut(s) 342, 576, 596
Eco47I GGWCC 2 cut(s) 329, 1529
Eco52I CGGCCG 1 cut(s) 1533
Eco57I CTGAAG 3 cut(s) 858, 1760, 1805
Eco88I CYCGRG 2 cut(s) 1243, 1323
EcoRI GAATTC 1 cut(s) 703
EcoRII CCWGG 1 cut(s) 785
EcoT14I CCWWGG 1 cut(s) 575
EcoT22I ATGCAT 3 cut(s) 1026, 1729, 1774
ErhI CCWWGG 1 cut(s) 575
FaeI CATG 9 cut(s) 455, 673, 811, 820, 985, 1024, 1036, 1731, 1807
FalI AAGNNNNNCTT 2 cut(s) 603, 635
FaqI GGGAC 2 cut(s) 337, 1613
FatI CATG 9 cut(s) 451, 669, 807, 816, 981, 1020, 1032, 1727, 1803
FbaI TGATCA 1 cut(s) 1144
FblI GTMKAC 1 cut(s) 1139
Fnu4HI GCNGC 8 cut(s) 54, 78, 191, 279, 282, 1069, 1700, 1703
FokI GGATG 4 cut(s) 611, 910, 956, 1396
Fsp4HI GCNGC 8 cut(s) 54, 78, 191, 279, 282, 1069, 1700, 1703
FspBI CTAG 2 cut(s) 933, 1479
GlaI GCGC 2 cut(s) 535, 1596
GluI GCNGC 8 cut(s) 54, 78, 191, 279, 282, 1069, 1700, 1703
GsaI CCCAGC 2 cut(s) 1749, 1794
GsuI CTGGAG 4 cut(s) 270, 573, 866, 1679
HaeIII GGCC 3 cut(s) 48, 1008, 1535
HapII CCGG 5 cut(s) 50, 863, 990, 1532, 1536
HgaI GACGC 4 cut(s) 118, 297, 412, 577
HhaI GCGC 2 cut(s) 536, 1597
Hin1I GRCGYC 3 cut(s) 5, 110, 308
Hin1II CATG 9 cut(s) 455, 673, 811, 820, 985, 1024, 1036, 1731, 1807
Hin6I GCGC 2 cut(s) 534, 1595
HinP1I GCGC 2 cut(s) 534, 1595
HincII GTYRAC 2 cut(s) 528, 676
HindII GTYRAC 2 cut(s) 528, 676
HinfI GANTC 4 cut(s) 762, 1482, 1539, 1640
HpaII CCGG 5 cut(s) 50, 863, 990, 1532, 1536
HphI GGTGA 7 cut(s) 26, 70, 169, 439, 630, 1437, 1560
Hpy166II GTNNAC 5 cut(s) 447, 528, 638, 676, 1140
Hpy188III TCNNGA 7 cut(s) 552, 752, 836, 863, 1243, 1267, 1325
Hpy8I GTNNAC 5 cut(s) 447, 528, 638, 676, 1140
Hpy99I CGWCG 9 cut(s) 112, 143, 157, 217, 313, 593, 1560, 1563, 1566
HpyAV CCTTC 7 cut(s) 154, 624, 1205, 1416, 1462, 1735, 1780
HpyCH4III ACNGT 5 cut(s) 14, 157, 434, 1101, 1181
HpyCH4IV ACGT 1 cut(s) 524
HpyCH4V TGCA 8 cut(s) 193, 278, 811, 1024, 1071, 1097, 1727, 1772
HpyF10VI GCNNNNNNNGC 3 cut(s) 187, 487, 1696
HpyF3I CTNAG 6 cut(s) 165, 234, 357, 477, 1038, 1188
HpySE526I ACGT 1 cut(s) 524
Hsp92I GRCGYC 3 cut(s) 5, 110, 308
Hsp92II CATG 9 cut(s) 455, 673, 811, 820, 985, 1024, 1036, 1731, 1807
HspAI GCGC 2 cut(s) 534, 1595
Kpn2I TCCGGA 1 cut(s) 862
Ksp22I TGATCA 1 cut(s) 1144
Kzo9I GATC 6 cut(s) 99, 748, 940, 1144, 1237, 1565
LguI GCTCTTC 1 cut(s) 834
LmnI GCTCC 6 cut(s) 74, 289, 554, 616, 1662, 1695
Lsp1109I GCAGC 6 cut(s) 177, 290, 293, 1055, 1711, 1714
LweI GCATC 1 cut(s) 265
MaeI CTAG 2 cut(s) 933, 1479
MaeII ACGT 1 cut(s) 524
MaeIII GTNAC 7 cut(s) 14, 58, 296, 428, 520, 905, 1351
MalI GATC 6 cut(s) 101, 750, 942, 1146, 1239, 1567
MbiI CCGCTC 1 cut(s) 77
MboI GATC 6 cut(s) 99, 748, 940, 1144, 1237, 1565
MflI RGATCY 3 cut(s) 99, 748, 940
MhlI GDGCHC 3 cut(s) 233, 439, 663
MluCI AATT 5 cut(s) 703, 850, 1161, 1362, 1670
MluI ACGCGT 1 cut(s) 586
MlyI GAGTC 1 cut(s) 1533
MmeI TCCRAC 5 cut(s) 850, 1163, 1275, 1487, 1576
Mph1103I ATGCAT 3 cut(s) 1026, 1729, 1774
MroI TCCGGA 1 cut(s) 862
MroXI GAANNNNTTC 1 cut(s) 634
MseI TTAA 1 cut(s) 945
MslI CAYNNNNRTG 2 cut(s) 650, 668
MspI CCGG 5 cut(s) 50, 863, 990, 1532, 1536
MspR9I CCNGG 3 cut(s) 50, 787, 991
Mva1269I GAATGC 2 cut(s) 1276, 1772
MvaI CCWGG 1 cut(s) 787
MvnI CGCG 1 cut(s) 588
MwoI GCNNNNNNNGC 3 cut(s) 187, 487, 1696
NciI CCSGG 2 cut(s) 50, 991
NdeII GATC 6 cut(s) 99, 748, 940, 1144, 1237, 1565
NlaIII CATG 9 cut(s) 455, 673, 811, 820, 985, 1024, 1036, 1731, 1807
NlaIV GGNNCC 4 cut(s) 210, 556, 750, 979
NmeAIII GCCGAG 2 cut(s) 128, 954
NmuCI GTSAC 3 cut(s) 14, 58, 428
NsiI ATGCAT 3 cut(s) 1026, 1729, 1774
NspI RCATGY 3 cut(s) 820, 1731, 1807
NspV TTCGAA 1 cut(s) 1455
PaeI GCATGC 1 cut(s) 1731
PaeR7I CTCGAG 2 cut(s) 1243, 1323
PceI AGGCCT 1 cut(s) 1008
PciI ACATGT 2 cut(s) 816, 1803
PciSI GCTCTTC 1 cut(s) 834
PcsI WCGNNNNNNNCGW 4 cut(s) 212, 258, 521, 1561
PctI GAATGC 2 cut(s) 1276, 1772
PdmI GAANNNNTTC 1 cut(s) 634
PfeI GAWTC 3 cut(s) 762, 1482, 1640
PflFI GACNNNGTC 2 cut(s) 716, 831
PkrI GCNGC 8 cut(s) 55, 79, 192, 280, 283, 1070, 1701, 1704
PleI GAGTC 1 cut(s) 1533
PpsI GAGTC 1 cut(s) 1533
PscI ACATGT 2 cut(s) 816, 1803
PshAI GACNNNNGTC 1 cut(s) 221
Psp6I CCWGG 1 cut(s) 785
PspFI CCCAGC 2 cut(s) 1745, 1790
PspGI CCWGG 1 cut(s) 785
PspN4I GGNNCC 4 cut(s) 210, 556, 750, 979
PspPI GGNCC 3 cut(s) 47, 329, 1529
PstI CTGCAG 1 cut(s) 195
PstNI CAGNNNCTG 1 cut(s) 1121
PsuI RGATCY 3 cut(s) 99, 748, 940
PsyI GACNNNGTC 2 cut(s) 716, 831
RsaI GTAC 3 cut(s) 461, 859, 1120
RsaNI GTAC 3 cut(s) 460, 858, 1119
RseI CAYNNNNRTG 2 cut(s) 650, 668
SapI GCTCTTC 1 cut(s) 834
SaqAI TTAA 1 cut(s) 945
SatI GCNGC 8 cut(s) 54, 78, 191, 279, 282, 1069, 1700, 1703
Sau3AI GATC 6 cut(s) 99, 748, 940, 1144, 1237, 1565
Sau96I GGNCC 3 cut(s) 47, 329, 1529
SchI GAGTC 1 cut(s) 1533
ScrFI CCNGG 3 cut(s) 50, 787, 991
SduI GDGCHC 3 cut(s) 233, 439, 663
SfaNI GCATC 1 cut(s) 265
SfcI CTRYAG 1 cut(s) 191
Sfr274I CTCGAG 2 cut(s) 1243, 1323
SfuI TTCGAA 1 cut(s) 1455
SinI GGWCC 2 cut(s) 329, 1529
SlaI CTCGAG 2 cut(s) 1243, 1323
SmiMI CAYNNNNRTG 2 cut(s) 650, 668
SmlI CTYRAG 3 cut(s) 440, 1243, 1323
SmoI CTYRAG 3 cut(s) 440, 1243, 1323
SphI GCATGC 1 cut(s) 1731
Sse9I AATT 5 cut(s) 703, 850, 1161, 1362, 1670
SseBI AGGCCT 1 cut(s) 1008
SsiI CCGC 4 cut(s) 53, 56, 77, 772
SspMI CTAG 2 cut(s) 933, 1479
StuI AGGCCT 1 cut(s) 1008
StyD4I CCNGG 3 cut(s) 48, 785, 989
StyI CCWWGG 1 cut(s) 575
TaaI ACNGT 5 cut(s) 14, 157, 434, 1101, 1181
TaiI ACGT 1 cut(s) 527
TaqI TCGA 7 cut(s) 174, 1209, 1244, 1324, 1455, 1582, 1707
TaqII GACCGA 1 cut(s) 558
TasI AATT 5 cut(s) 703, 850, 1161, 1362, 1670
TatI WGTACW 1 cut(s) 459
TauI GCSGC 2 cut(s) 56, 80
TfiI GAWTC 3 cut(s) 762, 1482, 1640
Tru1I TTAA 1 cut(s) 945
Tru9I TTAA 1 cut(s) 945
TscAI CASTG 5 cut(s) 43, 433, 439, 1104, 1184
TseFI GTSAC 3 cut(s) 14, 58, 428
TseI GCWGC 6 cut(s) 190, 278, 281, 1068, 1699, 1702
Tsp45I GTSAC 3 cut(s) 14, 58, 428
TspDTI ATGAA 7 cut(s) 173, 519, 658, 796, 1013, 1188, 1398
TspGWI ACGGA 4 cut(s) 33, 87, 102, 1615
TspRI CASTG 5 cut(s) 43, 433, 439, 1104, 1184
Tth111I GACNNNGTC 2 cut(s) 716, 831
VpaK11BI GGWCC 2 cut(s) 329, 1529
XapI RAATTY 3 cut(s) 703, 850, 1362
XceI RCATGY 3 cut(s) 820, 1731, 1807
XhoI CTCGAG 2 cut(s) 1243, 1323
XmiI GTMKAC 1 cut(s) 1139
XmnI GAANNNNTTC 1 cut(s) 634
XspI CTAG 2 cut(s) 933, 1479
Zsp2I ATGCAT 3 cut(s) 1026, 1729, 1774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.