Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000550

Physical Location & Seq

Genomic Coordinates Forward (+)

44209303 .. 44215183

Gene Structure 5881 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G541200.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGGCTCAGAACAAGGCAGCAGAAAATGGAGGGTTTAGTTTCACGAGGACAGGAAGCATGGGACGCCAGGGGTTACCGAAGATCCAAACCCACCCTGAGGCCACGTCTGAGGTTTGCCACGACGACAGCGGGACGCCGGTGAAGGCGAAGACCATCGACGAGCTTCATTCGCTTCAGAAGAAGAAGTCATCGCAGCCCACCACTCCCATCAACGGGAAGCAGGGATCTTTTGCCGCCATTTCTGAAGAGGATCGCCAGAAACAGCAGCTGCAGTCGATCAGTGCGTCTTTGGCGTCGCTGACGAGGGAGACGGGGCCCAAGGTGGTGAAGGGGGACCCAGCGAGGAAATCGGAGGGCCAGAAGGCGACGCATGTGGAGCATCATCTGTACGACGCTTCCCTCTTTGGCGTTAGTGATAGCGCCCTCAAGTTTACCCACATCCTCTACAATCTCTCTCCTGCTGAATTGTACGAGCAAGCTATCAAGTACGAGAAAGGTTCATTTATAACAGCAACTGGTGCCTTGGCCACATTGTCTGGAGCAAAGACTGGCCGTTCACCGAGAGACAAACGAGTGGTGAAAGATGAAGAAACCGAAAATGAGCTTTGGTGGGGAAAGGGCTCACCCAACATTGAAATGGACGAGCACACTTTCTTAGTGAACAGAGAAAGAGCTGTAGATTACTTGAATTCCTTGGACAAGGTATATGTGAATGATCAGTTTCTAAACTGGGATCCTGAACACCGAATCAAAGTTCGGATTGTATCCGCAAGAGCTTACCACTCCCTCTTTATGCATAACATGTGCATCCGCCCTACTCCTGAAGAGCTGTTGGAATTTGGTACTCCGGACTTCACAATCTACAATGCCGGGCAGTTCCCGTGTAACCGTTACACCCACTACATGACTTCCTCCACTAGCGTAGACCTCAATCTTTCTAGGAGGGAAATGGTCATCCTTGGCACCCAGTATGCTGGGGAAATGAAGAAAGGCCTGTTCAGTGTCATGCACTATCTCATGCCTAAGCGTCAAATCTTGTCCCTACACTCCGGCTGCAACATGGGGAAAGATGGGGATGTTGCCCTTTTCTTTGGTTTATCAGGCACTGGGAAGACGACTCTGTCTACAGATCATAATAGGTATTTAATTGGAGATGATGAGCACTGCTGGAGCAACAATGGTGTGTCAAACATTGAAGGTGGTTGCTATGCCAAGTGCATTGATTTGTCAAAGGACAAGGAGCCAGATATTTGGAATGCTATCAAATTTGGGACTGTTGTGGAGAATGTTGTGTTCGATGAGCATACTCGAGAGGTGGATTACTCCGAAAAATCTGTTACTGAGAACACTCGGGCGGCATATCCTATAGAATACATACCAAATGCGAAAATACCATGTGTTGGCCCCCATCCAAAAAATGTCATCCTTCTGGCATGTGATGCATTTGGTGTGCTCCCACCTGTGAGCAAGTTGAGCTTGGCACAAACTATGTACCATTTCATCAGCGGCTACACTGCTTTGGTGGCTGGAACAGAGGATGGTATTAAGGAGCCGCAAGCTACATTCTCAGCATGCTTCGGTGCAGCATTTATAATGATGCATCCCACAAGGTATGCAGCAATGTTGTCTGAAAAGATGCAGAAGCACGGCGCCACTGGATGGCTTGTTAATACAGGCTGGTCTGCAGGAAGGTATGGAACAGGTAACCGTATCAAATTAGCCTATACCAGGAAGATTATTGATGCTATTCACTCGGGGAGGCTTTTAAATGCAAGCTACACCAAGACTGAAGTATTTGGTCTTGAGATCCCTACTGAGATTGAGGGTGTACCTTCAGAAATTCTGGATCCAACAAACACTTGGTCAGACAAAAAAGCCTACAAAGATACACTGCTTCAGCTAGGTGGTCTGTTCAAGAAGAACTTTGAGGTATTCTTGAATCACAAGATTGGAAAGGACAACAAGCTCACAGAGGAAATTCTTGCAGCGGGTCCAAATTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004611 GO:0004612 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006006 GO:0006094 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016020 GO:0016036 GO:0016051 GO:0016829 GO:0016830 GO:0016831 GO:0019318 GO:0019319 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0042221 GO:0042594 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046364 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0071496 GO:0071704 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PEPCK_ATP

Protein Analysis

668

Amino Acids

74.04

Weight (kDa)

6.77

Isoelectric Point (pI)

39.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca	FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica	MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica	Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis	pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis	RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata	RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora	Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii	Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa	Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha	Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana	Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	506, 1592
AasI	GACNNNNNNGTC	1 cut(s)	1120
AccB1I	GGYRCC	3 cut(s)	518, 962, 1649
AccB7I	CCANNNNNTGG	2 cut(s)	1400, 1659
AccI	GTMKAC	2 cut(s)	924, 1124
AccIII	TCCGGA	1 cut(s)	847
AciI	CCGC	8 cut(s)	129, 234, 768, 811, 1355, 1506, 1553, 1988
AclWI	GGATC	8 cut(s)	76, 232, 258, 728, 741, 1801, 1841, 1854
AcoI	YGGCCR	2 cut(s)	525, 550
AcsI	RAATTY	6 cut(s)	688, 836, 1265, 1839, 1977, 1996
AcuI	CTGAAG	6 cut(s)	158, 264, 843, 1809, 1818, 1880
AcyI	GRCGYC	4 cut(s)	64, 134, 293, 1650
AfaI	GTAC	6 cut(s)	389, 470, 488, 844, 1493, 1830
AfiI	CCNNNNNNNGG	6 cut(s)	97, 212, 213, 1400, 1659, 1728
AflIII	ACRYGT	1 cut(s)	801
AgsI	TTSAA	5 cut(s)	635, 688, 1196, 1915, 1939
AjiI	CACGTC	1 cut(s)	105
AjnI	CCWGG	2 cut(s)	66, 1727
Alw21I	GWGCWC	3 cut(s)	648, 1164, 1455
Alw26I	GTCTC	2 cut(s)	302, 558
AlwI	GGATC	8 cut(s)	76, 232, 258, 728, 741, 1801, 1841, 1854
AlwNI	CAGNNNCTG	3 cut(s)	268, 515, 1106
Ama87I	CYCGRG	3 cut(s)	1308, 1350, 1753
Aor13HI	TCCGGA	1 cut(s)	847
AoxI	GGCC	7 cut(s)	99, 314, 355, 525, 550, 991, 1402
ApaI	GGGCCC	1 cut(s)	318
ApeKI	GCWGC	8 cut(s)	17, 193, 265, 268, 1053, 1583, 1616, 1985
ApoI	RAATTY	6 cut(s)	688, 836, 1265, 1839, 1977, 1996
ArsI	GACNNNNNNTTYG	2 cut(s)	1847, 1879
AspLEI	GCGC	2 cut(s)	422, 1652
AspS9I	GGNCC	6 cut(s)	314, 315, 334, 355, 1403, 1991
AsuC2I	CCSGG	1 cut(s)	871
AsuHPI	GGTGA	5 cut(s)	151, 337, 549, 589, 615
AvaI	CYCGRG	3 cut(s)	1308, 1350, 1753
AvaII	GGWCC	2 cut(s)	334, 1991
AxyI	CCTNAGG	1 cut(s)	96
BaeGI	GKGCMC	1 cut(s)	318
BalI	TGGCCA	1 cut(s)	527
BamHI	GGATCC	2 cut(s)	733, 1846
BanI	GGYRCC	3 cut(s)	518, 962, 1649
BanII	GRGCYC	2 cut(s)	318, 623
BauI	CACGAG	1 cut(s)	43
BbsI	GAAGAC	2 cut(s)	155, 1118
Bbv12I	GWGCWC	3 cut(s)	648, 1164, 1455
BbvI	GCAGC	8 cut(s)	29, 205, 255, 277, 1040, 1595, 1628, 1997
BccI	CCATC	6 cut(s)	161, 215, 1064, 1416, 1532, 1653
BceAI	ACGGC	2 cut(s)	537, 1663
BciT130I	CCWGG	2 cut(s)	68, 1729
BciVI	GTATCC	1 cut(s)	775
BclI	TGATCA	1 cut(s)	715
BcnI	CCSGG	1 cut(s)	871
BcoDI	GTCTC	2 cut(s)	302, 558
BfaI	CTAG	3 cut(s)	918, 939, 1901
BfmI	CTRYAG	5 cut(s)	269, 675, 1125, 1365, 1683
BfoI	RGCGCY	2 cut(s)	423, 1653
BfuI	GTATCC	1 cut(s)	775
Bme1390I	CCNGG	3 cut(s)	68, 871, 1729
Bme18I	GGWCC	2 cut(s)	334, 1991
BmeT110I	CYCGRG	3 cut(s)	1308, 1350, 1753
BmgBI	CACGTC	1 cut(s)	105
BmgT120I	GGNCC	6 cut(s)	314, 315, 334, 355, 1403, 1991
BmrFI	CCNGG	3 cut(s)	68, 871, 1729
BmrI	ACTGGG	3 cut(s)	739, 961, 1116
BmsI	GCATC	7 cut(s)	388, 816, 1429, 1587, 1609, 1626, 1732
BmuI	ACTGGG	3 cut(s)	739, 961, 1116
BpiI	GAAGAC	2 cut(s)	155, 1118
BpmI	CTGGAG	2 cut(s)	558, 1189
Bpu10I	CCTNAGC	1 cut(s)	1023
BpuEI	CTTGAG	2 cut(s)	410, 1823
BpuMI	CCSGG	1 cut(s)	871
BsaHI	GRCGYC	4 cut(s)	64, 134, 293, 1650
BsaJI	CCNNGG	5 cut(s)	67, 318, 522, 693, 958
BsaWI	WCCGGW	1 cut(s)	847
Bsc4I	CCNNNNNNNGG	6 cut(s)	97, 212, 213, 1400, 1659, 1728
Bse118I	RCCGGY	1 cut(s)	136
Bse1I	ACTGG	6 cut(s)	520, 553, 734, 967, 1111, 1660
Bse21I	CCTNAGG	1 cut(s)	96
Bse3DI	GCAATG	1 cut(s)	1626
BseAI	TCCGGA	1 cut(s)	847
BseBI	CCWGG	2 cut(s)	68, 1729
BseDI	CCNNGG	5 cut(s)	67, 318, 522, 693, 958
BseGI	GGATG	9 cut(s)	438, 807, 954, 1081, 1408, 1422, 1543, 1600, 1664
BseLI	CCNNNNNNNGG	6 cut(s)	97, 212, 213, 1400, 1659, 1728
BseMI	GCAATG	1 cut(s)	1626
BseMII	CTCAG	6 cut(s)	20, 87, 99, 1332, 1581, 1806
BseNI	ACTGG	6 cut(s)	520, 553, 734, 967, 1111, 1660
BseSI	GKGCMC	1 cut(s)	318
BseXI	GCAGC	8 cut(s)	29, 205, 255, 277, 1040, 1595, 1628, 1997
BseYI	CCCAGC	2 cut(s)	337, 974
BsgI	GTGCAG	1 cut(s)	1602
BshFI	GGCC	7 cut(s)	101, 316, 357, 527, 552, 993, 1404
BshNI	GGYRCC	3 cut(s)	518, 962, 1649
BsiHKAI	GWGCWC	3 cut(s)	648, 1164, 1455
BsiHKCI	CYCGRG	3 cut(s)	1308, 1350, 1753
BsiSI	CCGG	4 cut(s)	137, 848, 870, 1050
BslFI	GGGAC	5 cut(s)	75, 145, 347, 1024, 1285
BslI	CCNNNNNNNGG	6 cut(s)	97, 212, 213, 1400, 1659, 1728
BsmAI	GTCTC	2 cut(s)	302, 558
BsmBI	CGTCTC	1 cut(s)	302
BsmFI	GGGAC	5 cut(s)	75, 145, 347, 1024, 1285
BsmI	GAATGC	1 cut(s)	1261
BsnI	GGCC	7 cut(s)	101, 316, 357, 527, 552, 993, 1404
BsoBI	CYCGRG	3 cut(s)	1308, 1350, 1753
Bsp120I	GGGCCC	1 cut(s)	314
Bsp1286I	GDGCHC	5 cut(s)	318, 623, 648, 1164, 1455
Bsp13I	TCCGGA	1 cut(s)	847
Bsp143I	GATC	9 cut(s)	81, 224, 250, 276, 715, 733, 1129, 1806, 1846
BspACI	CCGC	8 cut(s)	129, 234, 768, 811, 1355, 1506, 1553, 1988
BspANI	GGCC	7 cut(s)	101, 316, 357, 527, 552, 993, 1404
BspCNI	CTCAG	6 cut(s)	19, 88, 100, 1333, 1580, 1807
BspEI	TCCGGA	1 cut(s)	847
BspMAI	CTGCAG	2 cut(s)	273, 1687
BspPI	GGATC	8 cut(s)	76, 232, 258, 728, 741, 1801, 1841, 1854
BspQI	GCTCTTC	1 cut(s)	819
BspT107I	GGYRCC	3 cut(s)	518, 962, 1649
BsrDI	GCAATG	1 cut(s)	1626
BsrFI	RCCGGY	1 cut(s)	136
BsrI	ACTGG	6 cut(s)	520, 553, 734, 967, 1111, 1660
BssAI	RCCGGY	1 cut(s)	136
BssECI	CCNNGG	5 cut(s)	67, 318, 522, 693, 958
BssMI	GATC	9 cut(s)	81, 224, 250, 276, 715, 733, 1129, 1806, 1846
BssNI	GRCGYC	4 cut(s)	64, 134, 293, 1650
BssSI	CACGAG	1 cut(s)	43
BssT1I	CCWWGG	4 cut(s)	318, 522, 693, 958
Bst2BI	CACGAG	1 cut(s)	43
Bst2UI	CCWGG	2 cut(s)	68, 1729
Bst4CI	ACNGT	3 cut(s)	890, 1276, 1709
Bst6I	CTCTTC	2 cut(s)	240, 819
BstACI	GRCGYC	4 cut(s)	64, 134, 293, 1650
BstAPI	GCANNNNNTGC	2 cut(s)	518, 1439
BstC8I	GCNNGC	4 cut(s)	477, 1557, 1573, 1774
BstDEI	CTNAG	8 cut(s)	6, 96, 108, 655, 1023, 1341, 1567, 1815
BstEII	GGTNACC	2 cut(s)	72, 1703
BstENI	CCTNNNNNAGG	1 cut(s)	1726
BstF5I	GGATG	9 cut(s)	438, 807, 954, 1081, 1408, 1422, 1543, 1600, 1664
BstH2I	RGCGCY	2 cut(s)	423, 1653
BstHHI	GCGC	2 cut(s)	422, 1652
BstKTI	GATC	9 cut(s)	84, 227, 253, 279, 718, 736, 1132, 1809, 1849
BstMAI	GTCTC	2 cut(s)	302, 558
BstMBI	GATC	9 cut(s)	81, 224, 250, 276, 715, 733, 1129, 1806, 1846
BstMWI	GCNNNNNNNGC	8 cut(s)	63, 169, 290, 376, 518, 1439, 1473, 1523
BstNI	CCWGG	2 cut(s)	68, 1729
BstNSI	RCATGY	4 cut(s)	374, 805, 1437, 1575
BstPI	GGTNACC	2 cut(s)	72, 1703
BstSCI	CCNGG	3 cut(s)	66, 869, 1727
BstSFI	CTRYAG	5 cut(s)	269, 675, 1125, 1365, 1683
BstSLI	GKGCMC	1 cut(s)	318
BstV1I	GCAGC	8 cut(s)	29, 205, 255, 277, 1040, 1595, 1628, 1997
BstV2I	GAAGAC	2 cut(s)	155, 1118
BstX2I	RGATCY	5 cut(s)	81, 224, 733, 1806, 1846
BstXI	CCANNNNNNTGG	2 cut(s)	974, 1251
BstYI	RGATCY	5 cut(s)	81, 224, 733, 1806, 1846
Bsu36I	CCTNAGG	1 cut(s)	96
BsuI	GTATCC	1 cut(s)	775
BsuRI	GGCC	7 cut(s)	101, 316, 357, 527, 552, 993, 1404
BtgZI	GCGATG	1 cut(s)	174
BtrI	CACGTC	1 cut(s)	105
BtsCI	GGATG	9 cut(s)	438, 807, 954, 1081, 1408, 1422, 1543, 1600, 1664
BtsI	GCAGTG	3 cut(s)	1162, 1512, 1889
BtsIMutI	CAGTG	7 cut(s)	286, 1006, 1104, 1162, 1512, 1653, 1889
Cac8I	GCNNGC	4 cut(s)	477, 1557, 1573, 1774
CaiI	CAGNNNCTG	3 cut(s)	268, 515, 1106
CfoI	GCGC	2 cut(s)	422, 1652
Cfr10I	RCCGGY	1 cut(s)	136
Cfr13I	GGNCC	6 cut(s)	314, 315, 334, 355, 1403, 1991
CseI	GACGC	7 cut(s)	72, 142, 273, 282, 376, 401, 1016
Csp6I	GTAC	6 cut(s)	388, 469, 487, 843, 1492, 1829
CviQI	GTAC	6 cut(s)	388, 469, 487, 843, 1492, 1829
DdeI	CTNAG	8 cut(s)	6, 96, 108, 655, 1023, 1341, 1567, 1815
DinI	GGCGCC	1 cut(s)	1651
DpnI	GATC	9 cut(s)	83, 226, 252, 278, 717, 735, 1131, 1808, 1848
DpnII	GATC	9 cut(s)	81, 224, 250, 276, 715, 733, 1129, 1806, 1846
DraI	TTTAAA	1 cut(s)	1767
DrdI	GACNNNNNNGTC	1 cut(s)	1120
DseDI	GACNNNNNNGTC	1 cut(s)	1120
EaeI	YGGCCR	2 cut(s)	525, 550
Eam1104I	CTCTTC	2 cut(s)	240, 819
EarI	CTCTTC	2 cut(s)	240, 819
EciI	GGCGGA	1 cut(s)	800
Eco130I	CCWWGG	4 cut(s)	318, 522, 693, 958
Eco147I	AGGCCT	1 cut(s)	993
Eco24I	GRGCYC	2 cut(s)	318, 623
Eco47I	GGWCC	2 cut(s)	334, 1991
Eco57I	CTGAAG	6 cut(s)	158, 264, 843, 1809, 1818, 1880
Eco81I	CCTNAGG	1 cut(s)	96
Eco88I	CYCGRG	3 cut(s)	1308, 1350, 1753
Eco91I	GGTNACC	2 cut(s)	72, 1703
EcoNI	CCTNNNNNAGG	1 cut(s)	1726
EcoO109I	RGGNCCY	2 cut(s)	314, 334
EcoO65I	GGTNACC	2 cut(s)	72, 1703
EcoRI	GAATTC	1 cut(s)	688
EcoRII	CCWGG	2 cut(s)	66, 1727
EcoT14I	CCWWGG	4 cut(s)	318, 522, 693, 958
EcoT22I	ATGCAT	3 cut(s)	798, 1444, 1602
EcoT38I	GRGCYC	2 cut(s)	318, 623
EgeI	GGCGCC	1 cut(s)	1651
EheI	GGCGCC	1 cut(s)	1651
ErhI	CCWWGG	4 cut(s)	318, 522, 693, 958
Esp3I	CGTCTC	1 cut(s)	302
FalI	AAGNNNNNCTT	4 cut(s)	1460, 1492, 1907, 1939
FaqI	GGGAC	5 cut(s)	75, 145, 347, 1024, 1285
FauI	CCCGC	2 cut(s)	122, 1981
FbaI	TGATCA	1 cut(s)	715
FblI	GTMKAC	2 cut(s)	924, 1124
FokI	GGATG	9 cut(s)	425, 794, 941, 1088, 1395, 1409, 1550, 1587, 1671
FriOI	GRGCYC	2 cut(s)	318, 623
FspBI	CTAG	3 cut(s)	918, 939, 1901
GlaI	GCGC	2 cut(s)	421, 1651
GsaI	CCCAGC	2 cut(s)	341, 978
GsuI	CTGGAG	2 cut(s)	558, 1189
HaeII	RGCGCY	2 cut(s)	423, 1653
HaeIII	GGCC	7 cut(s)	101, 316, 357, 527, 552, 993, 1404
HapII	CCGG	4 cut(s)	137, 848, 870, 1050
HgaI	GACGC	7 cut(s)	72, 142, 273, 282, 376, 401, 1016
HhaI	GCGC	2 cut(s)	422, 1652
Hin1I	GRCGYC	4 cut(s)	64, 134, 293, 1650
Hin6I	GCGC	2 cut(s)	420, 1650
HinP1I	GCGC	2 cut(s)	420, 1650
HinfI	GANTC	3 cut(s)	747, 1117, 1939
HpaII	CCGG	4 cut(s)	137, 848, 870, 1050
HphI	GGTGA	5 cut(s)	151, 337, 549, 589, 615
Hpy166II	GTNNAC	6 cut(s)	432, 557, 661, 925, 1125, 1829
Hpy8I	GTNNAC	6 cut(s)	432, 557, 661, 925, 1125, 1829
Hpy99I	CGWCG	5 cut(s)	125, 161, 298, 370, 395
HpyAV	CCTTC	7 cut(s)	136, 322, 355, 1190, 1436, 1683, 1842
HpyCH4III	ACNGT	3 cut(s)	890, 1276, 1709
HpyCH4IV	ACGT	1 cut(s)	104
HpyF10VI	GCNNNNNNNGC	8 cut(s)	63, 169, 290, 376, 518, 1439, 1473, 1523
HpyF3I	CTNAG	8 cut(s)	6, 96, 108, 655, 1023, 1341, 1567, 1815
HpySE526I	ACGT	1 cut(s)	104
Hsp92I	GRCGYC	4 cut(s)	64, 134, 293, 1650
HspAI	GCGC	2 cut(s)	420, 1650
KasI	GGCGCC	1 cut(s)	1649
KflI	GGGWCCC	1 cut(s)	334
Kpn2I	TCCGGA	1 cut(s)	847
Ksp22I	TGATCA	1 cut(s)	715
Kzo9I	GATC	9 cut(s)	81, 224, 250, 276, 715, 733, 1129, 1806, 1846
LguI	GCTCTTC	1 cut(s)	819
LmnI	GCTCC	6 cut(s)	376, 539, 1170, 1240, 1458, 1549
Lsp1109I	GCAGC	8 cut(s)	29, 205, 255, 277, 1040, 1595, 1628, 1997
LweI	GCATC	7 cut(s)	388, 816, 1429, 1587, 1609, 1626, 1732
MaeI	CTAG	3 cut(s)	918, 939, 1901
MaeII	ACGT	1 cut(s)	104
MaeIII	GTNAC	5 cut(s)	72, 884, 890, 1336, 1703
MalI	GATC	9 cut(s)	83, 226, 252, 278, 717, 735, 1131, 1808, 1848
MboI	GATC	9 cut(s)	81, 224, 250, 276, 715, 733, 1129, 1806, 1846
MflI	RGATCY	5 cut(s)	81, 224, 733, 1806, 1846
MhlI	GDGCHC	5 cut(s)	318, 623, 648, 1164, 1455
MlsI	TGGCCA	1 cut(s)	527
MluCI	AATT	9 cut(s)	464, 688, 836, 1146, 1265, 1715, 1839, 1977, 1996
MluNI	TGGCCA	1 cut(s)	527
Mly113I	GGCGCC	1 cut(s)	1650
MlyI	GAGTC	1 cut(s)	1111
MmeI	TCCRAC	2 cut(s)	813, 1874
Mox20I	TGGCCA	1 cut(s)	527
Mph1103I	ATGCAT	3 cut(s)	798, 1444, 1602
MroI	TCCGGA	1 cut(s)	847
MscI	TGGCCA	1 cut(s)	527
MseI	TTAA	5 cut(s)	1145, 1545, 1668, 1766, 2002
MslI	CAYNNNNRTG	1 cut(s)	635
Msp20I	TGGCCA	1 cut(s)	527
MspA1I	CMGCKG	4 cut(s)	129, 268, 1506, 1988
MspI	CCGG	4 cut(s)	137, 848, 870, 1050
MspR9I	CCNGG	3 cut(s)	68, 871, 1729
Mva1269I	GAATGC	1 cut(s)	1261
MvaI	CCWGG	2 cut(s)	68, 1729
MwoI	GCNNNNNNNGC	8 cut(s)	63, 169, 290, 376, 518, 1439, 1473, 1523
NarI	GGCGCC	1 cut(s)	1650
NciI	CCSGG	1 cut(s)	871
NdeII	GATC	9 cut(s)	81, 224, 250, 276, 715, 733, 1129, 1806, 1846
NsiI	ATGCAT	3 cut(s)	798, 1444, 1602
NspI	RCATGY	4 cut(s)	374, 805, 1437, 1575
PaeI	GCATGC	1 cut(s)	1575
PaeR7I	CTCGAG	1 cut(s)	1308
PceI	AGGCCT	1 cut(s)	993
PciI	ACATGT	1 cut(s)	801
PciSI	GCTCTTC	1 cut(s)	819
PcsI	WCGNNNNNNNCGW	1 cut(s)	281
PctI	GAATGC	1 cut(s)	1261
PfeI	GAWTC	2 cut(s)	747, 1939
PflFI	GACNNNGTC	1 cut(s)	1120
PflMI	CCANNNNNTGG	2 cut(s)	1400, 1659
PleI	GAGTC	1 cut(s)	1111
PluTI	GGCGCC	1 cut(s)	1653
PpsI	GAGTC	1 cut(s)	1111
PpuMI	RGGWCCY	1 cut(s)	334
PscI	ACATGT	1 cut(s)	801
PsiI	TTATAA	2 cut(s)	506, 1592
Psp5II	RGGWCCY	1 cut(s)	334
Psp6I	CCWGG	2 cut(s)	66, 1727
PspEI	GGTNACC	2 cut(s)	72, 1703
PspFI	CCCAGC	2 cut(s)	337, 974
PspGI	CCWGG	2 cut(s)	66, 1727
PspOMI	GGGCCC	1 cut(s)	314
PspPI	GGNCC	6 cut(s)	314, 315, 334, 355, 1403, 1991
PspPPI	RGGWCCY	1 cut(s)	334
PstI	CTGCAG	2 cut(s)	273, 1687
PstNI	CAGNNNCTG	3 cut(s)	268, 515, 1106
PsuI	RGATCY	5 cut(s)	81, 224, 733, 1806, 1846
PsyI	GACNNNGTC	1 cut(s)	1120
PvuII	CAGCTG	1 cut(s)	268
RsaI	GTAC	6 cut(s)	389, 470, 488, 844, 1493, 1830
RsaNI	GTAC	6 cut(s)	388, 469, 487, 843, 1492, 1829
RseI	CAYNNNNRTG	1 cut(s)	635
SapI	GCTCTTC	1 cut(s)	819
SaqAI	TTAA	5 cut(s)	1145, 1545, 1668, 1766, 2002
Sau3AI	GATC	9 cut(s)	81, 224, 250, 276, 715, 733, 1129, 1806, 1846
Sau96I	GGNCC	6 cut(s)	314, 315, 334, 355, 1403, 1991
SchI	GAGTC	1 cut(s)	1111
ScrFI	CCNGG	3 cut(s)	68, 871, 1729
SduI	GDGCHC	5 cut(s)	318, 623, 648, 1164, 1455
SfaNI	GCATC	7 cut(s)	388, 816, 1429, 1587, 1609, 1626, 1732
SfcI	CTRYAG	5 cut(s)	269, 675, 1125, 1365, 1683
SfoI	GGCGCC	1 cut(s)	1651
Sfr274I	CTCGAG	1 cut(s)	1308
SgrAI	CRCCGGYG	1 cut(s)	136
SinI	GGWCC	2 cut(s)	334, 1991
SlaI	CTCGAG	1 cut(s)	1308
SmiMI	CAYNNNNRTG	1 cut(s)	635
SmlI	CTYRAG	3 cut(s)	425, 1308, 1802
SmoI	CTYRAG	3 cut(s)	425, 1308, 1802
SphI	GCATGC	1 cut(s)	1575
Sse9I	AATT	9 cut(s)	464, 688, 836, 1146, 1265, 1715, 1839, 1977, 1996
SseBI	AGGCCT	1 cut(s)	993
SsiI	CCGC	8 cut(s)	129, 234, 768, 811, 1355, 1506, 1553, 1988
SspDI	GGCGCC	1 cut(s)	1649
SspMI	CTAG	3 cut(s)	918, 939, 1901
StuI	AGGCCT	1 cut(s)	993
StyD4I	CCNGG	3 cut(s)	66, 869, 1727
StyI	CCWWGG	4 cut(s)	318, 522, 693, 958
TaaI	ACNGT	3 cut(s)	890, 1276, 1709
TaiI	ACGT	1 cut(s)	107
TaqI	TCGA	4 cut(s)	156, 275, 1296, 1309
TasI	AATT	9 cut(s)	464, 688, 836, 1146, 1265, 1715, 1839, 1977, 1996
TauI	GCSGC	4 cut(s)	236, 1358, 1509, 1555
TfiI	GAWTC	2 cut(s)	747, 1939
Tru1I	TTAA	5 cut(s)	1145, 1545, 1668, 1766, 2002
Tru9I	TTAA	5 cut(s)	1145, 1545, 1668, 1766, 2002
TscAI	CASTG	7 cut(s)	286, 1006, 1111, 1169, 1519, 1660, 1896
TseI	GCWGC	8 cut(s)	17, 193, 265, 268, 1053, 1583, 1616, 1985
TspDTI	ATGAA	5 cut(s)	155, 489, 600, 998, 1489
TspRI	CASTG	7 cut(s)	286, 1006, 1111, 1169, 1519, 1660, 1896
Tth111I	GACNNNGTC	1 cut(s)	1120
Van91I	CCANNNNNTGG	2 cut(s)	1400, 1659
VpaK11BI	GGWCC	2 cut(s)	334, 1991
XagI	CCTNNNNNAGG	1 cut(s)	1726
XapI	RAATTY	6 cut(s)	688, 836, 1265, 1839, 1977, 1996
XceI	RCATGY	4 cut(s)	374, 805, 1437, 1575
XcmI	CCANNNNNNNNNTGG	2 cut(s)	634, 1857
XhoI	CTCGAG	1 cut(s)	1308
XmiI	GTMKAC	2 cut(s)	924, 1124
XspI	CTAG	3 cut(s)	918, 939, 1901
Zsp2I	ATGCAT	3 cut(s)	798, 1444, 1602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.