Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0000550

Physical Location & Seq

Genomic Coordinates Forward (+)

58093195 .. 58099154

Gene Structure 5960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG381200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGCGTCTAACGGTGACGGAGATTTCAGCTTCGCGACTGGGAACGGCAACGGAGCGGCGAGGAATGGGCTGGCGAAGATCCATACGACACCGAAGAACGGGAATGGGGTGTGCCACGACGACAGGTCGGCGACTGTGAAGGCTCAGACCATTGACCAGCTTCATTCACTGCAGAAGAAGAAGTCGGCACCGACGACACCCATCAAGGGCACTCAAGGAGACTTTGCTGTAGCTCTCTCCGAGGAGGAACGCCAGATGCAGCAGCTCCAGTCCATCAGTAACTCTCTGGCGTCGCTGACGAGAGGGACTGGACCAAAGGTTGTGAGAGGAGACCCTGCTCAGCAGTCTCCTCATCATACCCCAAAGGTGTCATCGCACCACCATCATTTCACTCCCACCATCAGCGTCAGTGACAGTGCCCTCAAGTTCACCCATGTCCTGTACAACCTCTCTCCTGCTGAGCTATATGAGCAGGCGATAAATAATGAAAAGGGGTCGTTCGTTACGTCAACAGGCGCATTAGCAACACTTTCTGGAGCCAAGACGGGTCGGTCTCCAAGGGATAAACGCGTCGTCAAGGATGAGACCACAGAAGAGGAGCTTTGGTGGGGAAGGGGTTCACCAAACATTGAAATGGACGAGCACACTTTCATGGTCAACAGGGAGAGAGCTGTGGATTACCTGAATTCTTTGGACAAGGTCTTTGTAAATGACCAATACTTGAACTGGGATCCAGAAAACAGAATCAAAGTGCGGATTGTCTCTGCCAGGGCTTATCATTCTTTGTTCATGCACAACATGTGTATCCGACCCAGTCCTGAAGAGCTGGAGAATTTTGGTACTCCGGACTTCACTATTTACAATGCTGGTCAGTTCCCGTGCAATCGTTACACCCACTACATGACATCCTCCACTAGCATAGATCTTAATCTTGGTAGGAGGGAAATGGTCATCCTCGGCACCATGTATGCTGGGGAAATGAAGAAAGGTCTTTTCAGTCTCATGCATTATCTCATGCCTAAGCGACAAATCCTATCCCTACATTCTGGCTGCAATATGGGGAAAGATGGAGATGTTGCACTGTTCTTTGGATTGTCAGGTACTGGGAAGACAACTCTGTCTACTGATCACAATAGATACCTAATTGGAGATGATGAACACTGTTGGACTGAGAATTGTGTATCAAATATCGAAGGTGGTTGCTATGCCAAGTGTATTGATCTCTCGAGGGAGAAAGAGCCTGACATCTGGAATGCCATCAAGTTTGGTGCTGTGTTGGAAAATGTTGTGTTTGATGAGCATACTCGAGAAGTGGATTATTCTGACAAATCTGTTACAGAGAATACTCGGGCAGCCTACCCCATTGAGTACATTCCCAATGCAAAAATACCGTGTGTTGGTCCTCATCCGAAGAATGTGATACTTTTGGCATGTGATGCATTTGGTGTGCTCCCACCTGTGAGCAAGTTAAACCTGGCACAGACCATGTACCATTTCATCAGTGGCTATACTGCACTGGTTGCTGGAACTGAAGAGGGCATTAAAGAGCCACAGGCAACATTCTCGGCTTGCTTTGGTGCTGCATTTATAATGTTGCATCCAACGAAGTATGCAGCAATGCTTGCTCAGAAAATGCAGCAGCATGGTGCAACTGGATGGCTGGTCAACACTGGCTGGTCTGGCGGAAGGTATGGATCGGGAAAGCGCATTAAGCTACCCTACACCCGGAAAATCATTGATGCCATACACTCTGGCAGCCTCTTGAATGCAAATTACAAGAAGACTGAAGTGTTTGGACTTGAGATCCCCGCTGAGGTTGAGGGAGTGCCTTCAGAAATACTGGATCCAGTGAACACTTGGTCAGACAAGAATGCATACCAGGAAACACTCCTGAAGTTGGCTGGTCTATTTAAGAACAACTTTGAGACTTTTACAAACTACAAGATTGGCAAGGACAACAAGCTGACTGAAGAAATTCTCGCTGCTGGTCCGAATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004611 GO:0004612 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006006 GO:0006094 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016020 GO:0016036 GO:0016051 GO:0016829 GO:0016830 GO:0016831 GO:0019318 GO:0019319 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0042221 GO:0042594 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046364 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0071496 GO:0071704 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PEPCK_ATP

Protein Analysis

666

Amino Acids

73.66

Weight (kDa)

6.57

Isoelectric Point (pI)

36.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPCK_ATP	PF01293	145 - 612	9.1e-214	Phosphoenolpyruvate carboxykinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca	FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica	MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica	Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis	pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis	RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata	RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora	Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii	Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa	Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha	Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana	Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1589
AasI	GACNNNNNNGTC	2 cut(s)	550, 1117
AccB1I	GGYRCC	2 cut(s)	187, 959
AccBSI	CCGCTC	1 cut(s)	56
AccI	GTMKAC	1 cut(s)	1121
AccII	CGCG	2 cut(s)	35, 570
AccIII	TCCGGA	1 cut(s)	844
AciI	CCGC	4 cut(s)	56, 754, 1683, 1809
AclWI	GGATC	7 cut(s)	73, 725, 738, 1702, 1798, 1838, 1851
AcsI	RAATTY	4 cut(s)	685, 832, 1974, 1993
AcuI	CTGAAG	6 cut(s)	840, 1551, 1806, 1815, 1913, 1989
AcyI	GRCGYC	2 cut(s)	5, 290
AfaI	GTAC	5 cut(s)	443, 841, 1102, 1370, 1490
AfiI	CCNNNNNNNGG	6 cut(s)	98, 206, 1397, 1725, 1813, 1897
AflIII	ACRYGT	2 cut(s)	568, 798
AgsI	TTSAA	3 cut(s)	632, 724, 1765
AhdI	GACNNNNNGTC	1 cut(s)	124
AjnI	CCWGG	3 cut(s)	767, 1473, 1878
Alw21I	GWGCWC	2 cut(s)	645, 1452
Alw26I	GTCTC	8 cut(s)	213, 324, 351, 558, 578, 766, 1004, 1919
AlwI	GGATC	7 cut(s)	73, 725, 738, 1702, 1798, 1838, 1851
AlwNI	CAGNNNCTG	1 cut(s)	1103
Ama87I	CYCGRG	3 cut(s)	1225, 1305, 1347
Aor13HI	TCCGGA	1 cut(s)	844
ApoI	RAATTY	4 cut(s)	685, 832, 1974, 1993
ArsI	GACNNNNNNTTYG	2 cut(s)	686, 718
Asp700I	GAANNNNTTC	2 cut(s)	616, 1974
AspLEI	GCGC	2 cut(s)	518, 1707
AspS9I	GGNCC	3 cut(s)	311, 1400, 1988
AsuC2I	CCSGG	1 cut(s)	1726
AsuHPI	GGTGA	3 cut(s)	26, 421, 612
AvaI	CYCGRG	3 cut(s)	1225, 1305, 1347
AvaII	GGWCC	3 cut(s)	311, 1400, 1988
BaeGI	GKGCMC	2 cut(s)	212, 421
BaeI	ACNNNNGTAYC	2 cut(s)	787, 820
BamHI	GGATCC	2 cut(s)	730, 1843
BanI	GGYRCC	2 cut(s)	187, 959
BbsI	GAAGAC	2 cut(s)	1115, 1787
Bbv12I	GWGCWC	2 cut(s)	645, 1452
BbvCI	CCTCAGC	1 cut(s)	1812
BccI	CCATC	7 cut(s)	209, 281, 390, 407, 1061, 1265, 1650
BceAI	ACGGC	1 cut(s)	61
BcgI	CGANNNNNNTGC	2 cut(s)	1545, 1579
BciT130I	CCWGG	3 cut(s)	769, 1475, 1880
BciVI	GTATCC	1 cut(s)	815
BclI	TGATCA	1 cut(s)	1126
BcnI	CCSGG	1 cut(s)	1726
BcoDI	GTCTC	8 cut(s)	213, 324, 351, 558, 578, 766, 1004, 1919
BfaI	CTAG	2 cut(s)	915, 1999
BfmI	CTRYAG	2 cut(s)	170, 228
BfuI	GTATCC	1 cut(s)	815
BglII	AGATCT	1 cut(s)	922
BlpI	GCTNAGC	2 cut(s)	339, 459
Bme1390I	CCNGG	4 cut(s)	769, 1475, 1726, 1880
Bme18I	GGWCC	3 cut(s)	311, 1400, 1988
BmeRI	GACNNNNNGTC	1 cut(s)	124
BmeT110I	CYCGRG	3 cut(s)	1225, 1305, 1347
BmgT120I	GGNCC	3 cut(s)	311, 1400, 1988
BmiI	GGNNCC	5 cut(s)	189, 538, 732, 961, 1845
BmrFI	CCNGG	4 cut(s)	769, 1475, 1726, 1880
BmrI	ACTGGG	4 cut(s)	48, 736, 807, 1113
BmsI	GCATC	4 cut(s)	246, 1426, 1606, 1729
BmuI	ACTGGG	4 cut(s)	48, 736, 807, 1113
BpiI	GAAGAC	2 cut(s)	1115, 1787
BpmI	CTGGAG	3 cut(s)	251, 555, 848
Bpu10I	CCTNAGC	2 cut(s)	1020, 1812
Bpu1102I	GCTNAGC	2 cut(s)	339, 459
BpuEI	CTTGAG	3 cut(s)	198, 407, 1820
BpuMI	CCSGG	1 cut(s)	1726
BsaBI	GATNNNNATC	1 cut(s)	927
BsaHI	GRCGYC	2 cut(s)	5, 290
BsaI	GGTCTC	3 cut(s)	324, 558, 578
BsaJI	CCNNGG	4 cut(s)	240, 557, 768, 955
BsaWI	WCCGGW	1 cut(s)	844
BsaXI	ACNNNNNCTCC	2 cut(s)	590, 620
Bsc4I	CCNNNNNNNGG	6 cut(s)	98, 206, 1397, 1725, 1813, 1897
Bse3DI	GCAATG	1 cut(s)	1623
Bse8I	GATNNNNATC	1 cut(s)	927
BseAI	TCCGGA	1 cut(s)	844
BseBI	CCWGG	3 cut(s)	769, 1475, 1880
BseDI	CCNNGG	4 cut(s)	240, 557, 768, 955
BseGI	GGATG	6 cut(s)	586, 905, 951, 1405, 1597, 1661
BseJI	GATNNNNATC	1 cut(s)	927
BseLI	CCNNNNNNNGG	6 cut(s)	98, 206, 1397, 1725, 1813, 1897
BseMI	GCAATG	1 cut(s)	1623
BseMII	CTCAG	6 cut(s)	158, 353, 450, 1161, 1640, 1803
BseRI	GAGGAG	4 cut(s)	257, 339, 342, 611
BseSI	GKGCMC	2 cut(s)	212, 421
BseYI	CCCAGC	1 cut(s)	971
BsgI	GTGCAG	1 cut(s)	1497
Bsh1236I	CGCG	2 cut(s)	35, 570
BshNI	GGYRCC	2 cut(s)	187, 959
BsiHKAI	GWGCWC	2 cut(s)	645, 1452
BsiHKCI	CYCGRG	3 cut(s)	1225, 1305, 1347
BsiSI	CCGG	2 cut(s)	845, 1726
BslFI	GGGAC	1 cut(s)	319
BslI	CCNNNNNNNGG	6 cut(s)	98, 206, 1397, 1725, 1813, 1897
BsmAI	GTCTC	8 cut(s)	213, 324, 351, 558, 578, 766, 1004, 1919
BsmFI	GGGAC	1 cut(s)	319
BsmI	GAATGC	3 cut(s)	1258, 1771, 1876
Bso31I	GGTCTC	3 cut(s)	324, 558, 578
BsoBI	CYCGRG	3 cut(s)	1225, 1305, 1347
Bsp1286I	GDGCHC	4 cut(s)	212, 421, 645, 1452
Bsp13I	TCCGGA	1 cut(s)	844
Bsp1407I	TGTACA	1 cut(s)	441
Bsp143I	GATC	8 cut(s)	78, 730, 922, 1126, 1219, 1694, 1803, 1843
Bsp1720I	GCTNAGC	2 cut(s)	339, 459
Bsp68I	TCGCGA	1 cut(s)	35
BspACI	CCGC	4 cut(s)	56, 754, 1683, 1809
BspCNI	CTCAG	6 cut(s)	157, 352, 451, 1162, 1639, 1804
BspEI	TCCGGA	1 cut(s)	844
BspFNI	CGCG	2 cut(s)	35, 570
BspLI	GGNNCC	5 cut(s)	189, 538, 732, 961, 1845
BspMAI	CTGCAG	1 cut(s)	174
BspPI	GGATC	7 cut(s)	73, 725, 738, 1702, 1798, 1838, 1851
BspQI	GCTCTTC	1 cut(s)	816
BspT107I	GGYRCC	2 cut(s)	187, 959
BspTNI	GGTCTC	3 cut(s)	324, 558, 578
BsrBI	CCGCTC	1 cut(s)	56
BsrDI	GCAATG	1 cut(s)	1623
BsrGI	TGTACA	1 cut(s)	441
BssECI	CCNNGG	4 cut(s)	240, 557, 768, 955
BssMI	GATC	8 cut(s)	78, 730, 922, 1126, 1219, 1694, 1803, 1843
BssNI	GRCGYC	2 cut(s)	5, 290
BssT1I	CCWWGG	1 cut(s)	557
Bst2UI	CCWGG	3 cut(s)	769, 1475, 1880
Bst4CI	ACNGT	6 cut(s)	14, 136, 416, 1083, 1163, 1392
Bst6I	CTCTTC	3 cut(s)	588, 816, 1527
BstACI	GRCGYC	2 cut(s)	5, 290
BstAPI	GCANNNNNTGC	3 cut(s)	1436, 1520, 1622
BstAUI	TGTACA	1 cut(s)	441
BstC8I	GCNNGC	4 cut(s)	72, 474, 1570, 1623
BstDEI	CTNAG	7 cut(s)	144, 339, 459, 1020, 1170, 1626, 1812
BstF5I	GGATG	6 cut(s)	586, 905, 951, 1405, 1597, 1661
BstFNI	CGCG	2 cut(s)	35, 570
BstHHI	GCGC	2 cut(s)	518, 1707
BstKTI	GATC	8 cut(s)	81, 733, 925, 1129, 1222, 1697, 1806, 1846
BstMAI	GTCTC	8 cut(s)	213, 324, 351, 558, 578, 766, 1004, 1919
BstMBI	GATC	8 cut(s)	78, 730, 922, 1126, 1219, 1694, 1803, 1843
BstMWI	GCNNNNNNNGC	6 cut(s)	469, 1436, 1520, 1622, 1680, 1711
BstNI	CCWGG	3 cut(s)	769, 1475, 1880
BstNSI	RCATGY	2 cut(s)	802, 1434
BstSCI	CCNGG	4 cut(s)	767, 1473, 1724, 1878
BstSFI	CTRYAG	2 cut(s)	170, 228
BstSLI	GKGCMC	2 cut(s)	212, 421
BstUI	CGCG	2 cut(s)	35, 570
BstV2I	GAAGAC	2 cut(s)	1115, 1787
BstX2I	RGATCY	5 cut(s)	78, 730, 922, 1803, 1843
BstYI	RGATCY	5 cut(s)	78, 730, 922, 1803, 1843
BsuI	GTATCC	1 cut(s)	815
BtgZI	GCGATG	1 cut(s)	357
BtsCI	GGATG	6 cut(s)	586, 905, 951, 1405, 1597, 1661
BtsI	GCAGTG	1 cut(s)	167
BtsIMutI	CAGTG	9 cut(s)	167, 415, 421, 1079, 1159, 1507, 1514, 1668, 1854
BtuMI	TCGCGA	1 cut(s)	35
Cac8I	GCNNGC	4 cut(s)	72, 474, 1570, 1623
CaiI	CAGNNNCTG	1 cut(s)	1103
CfoI	GCGC	2 cut(s)	518, 1707
Cfr13I	GGNCC	3 cut(s)	311, 1400, 1988
CseI	GACGC	3 cut(s)	279, 394, 559
Csp6I	GTAC	5 cut(s)	442, 840, 1101, 1369, 1489
CviQI	GTAC	5 cut(s)	442, 840, 1101, 1369, 1489
DdeI	CTNAG	7 cut(s)	144, 339, 459, 1020, 1170, 1626, 1812
DpnI	GATC	8 cut(s)	80, 732, 924, 1128, 1221, 1696, 1805, 1845
DpnII	GATC	8 cut(s)	78, 730, 922, 1126, 1219, 1694, 1803, 1843
DrdI	GACNNNNNNGTC	2 cut(s)	550, 1117
DriI	GACNNNNNGTC	1 cut(s)	124
DseDI	GACNNNNNNGTC	2 cut(s)	550, 1117
Eam1104I	CTCTTC	3 cut(s)	588, 816, 1527
Eam1105I	GACNNNNNGTC	1 cut(s)	124
EarI	CTCTTC	3 cut(s)	588, 816, 1527
EciI	GGCGGA	1 cut(s)	1698
Eco130I	CCWWGG	1 cut(s)	557
Eco31I	GGTCTC	3 cut(s)	324, 558, 578
Eco47I	GGWCC	3 cut(s)	311, 1400, 1988
Eco57I	CTGAAG	6 cut(s)	840, 1551, 1806, 1815, 1913, 1989
Eco88I	CYCGRG	3 cut(s)	1225, 1305, 1347
EcoRI	GAATTC	1 cut(s)	685
EcoRII	CCWGG	3 cut(s)	767, 1473, 1878
EcoT14I	CCWWGG	1 cut(s)	557
EcoT22I	ATGCAT	3 cut(s)	1008, 1441, 1876
ErhI	CCWWGG	1 cut(s)	557
FalI	AAGNNNNNCTT	4 cut(s)	585, 617, 1904, 1936
FaqI	GGGAC	1 cut(s)	319
FauI	CCCGC	1 cut(s)	1816
FbaI	TGATCA	1 cut(s)	1126
FblI	GTMKAC	1 cut(s)	1121
FokI	GGATG	6 cut(s)	593, 892, 938, 1392, 1584, 1668
FspBI	CTAG	2 cut(s)	915, 1999
GlaI	GCGC	2 cut(s)	517, 1706
GsaI	CCCAGC	1 cut(s)	975
GsuI	CTGGAG	3 cut(s)	251, 555, 848
HapII	CCGG	2 cut(s)	845, 1726
HgaI	GACGC	3 cut(s)	279, 394, 559
HhaI	GCGC	2 cut(s)	518, 1707
Hin1I	GRCGYC	2 cut(s)	5, 290
Hin6I	GCGC	2 cut(s)	516, 1705
HinP1I	GCGC	2 cut(s)	516, 1705
HincII	GTYRAC	3 cut(s)	510, 658, 1666
HindII	GTYRAC	3 cut(s)	510, 658, 1666
HinfI	GANTC	1 cut(s)	744
HpaII	CCGG	2 cut(s)	845, 1726
HphI	GGTGA	3 cut(s)	26, 421, 612
Hpy166II	GTNNAC	7 cut(s)	429, 510, 620, 658, 1122, 1666, 1852
Hpy188I	TCNGA	9 cut(s)	147, 241, 809, 1324, 1410, 1629, 1834, 1864, 1992
Hpy8I	GTNNAC	7 cut(s)	429, 510, 620, 658, 1122, 1666, 1852
Hpy99I	CGWCG	4 cut(s)	122, 196, 295, 575
HpyAV	CCTTC	5 cut(s)	133, 606, 1187, 1680, 1839
HpyCH4III	ACNGT	6 cut(s)	14, 136, 416, 1083, 1163, 1392
HpyCH4IV	ACGT	1 cut(s)	506
HpyF10VI	GCNNNNNNNGC	6 cut(s)	469, 1436, 1520, 1622, 1680, 1711
HpyF3I	CTNAG	7 cut(s)	144, 339, 459, 1020, 1170, 1626, 1812
HpySE526I	ACGT	1 cut(s)	506
Hsp92I	GRCGYC	2 cut(s)	5, 290
HspAI	GCGC	2 cut(s)	516, 1705
Kpn2I	TCCGGA	1 cut(s)	844
Ksp22I	TGATCA	1 cut(s)	1126
Kzo9I	GATC	8 cut(s)	78, 730, 922, 1126, 1219, 1694, 1803, 1843
LguI	GCTCTTC	1 cut(s)	816
LmnI	GCTCC	5 cut(s)	53, 270, 536, 598, 1455
LweI	GCATC	4 cut(s)	246, 1426, 1606, 1729
MaeI	CTAG	2 cut(s)	915, 1999
MaeII	ACGT	1 cut(s)	506
MaeIII	GTNAC	6 cut(s)	14, 278, 410, 502, 887, 1333
MalI	GATC	8 cut(s)	80, 732, 924, 1128, 1221, 1696, 1805, 1845
MbiI	CCGCTC	1 cut(s)	56
MboI	GATC	8 cut(s)	78, 730, 922, 1126, 1219, 1694, 1803, 1843
MflI	RGATCY	5 cut(s)	78, 730, 922, 1803, 1843
MhlI	GDGCHC	4 cut(s)	212, 421, 645, 1452
MluCI	AATT	7 cut(s)	685, 832, 1143, 1174, 1771, 1974, 1993
MluI	ACGCGT	1 cut(s)	568
MmeI	TCCRAC	4 cut(s)	832, 1145, 1257, 1625
Mph1103I	ATGCAT	3 cut(s)	1008, 1441, 1876
MroI	TCCGGA	1 cut(s)	844
MroXI	GAANNNNTTC	2 cut(s)	616, 1974
MseI	TTAA	5 cut(s)	927, 1469, 1542, 1710, 1911
MslI	CAYNNNNRTG	2 cut(s)	632, 650
MspA1I	CMGCKG	1 cut(s)	1811
MspI	CCGG	2 cut(s)	845, 1726
MspR9I	CCNGG	4 cut(s)	769, 1475, 1726, 1880
Mva1269I	GAATGC	3 cut(s)	1258, 1771, 1876
MvaI	CCWGG	3 cut(s)	769, 1475, 1880
MvnI	CGCG	2 cut(s)	35, 570
MwoI	GCNNNNNNNGC	6 cut(s)	469, 1436, 1520, 1622, 1680, 1711
NciI	CCSGG	1 cut(s)	1726
NdeII	GATC	8 cut(s)	78, 730, 922, 1126, 1219, 1694, 1803, 1843
NlaIV	GGNNCC	5 cut(s)	189, 538, 732, 961, 1845
NmeAIII	GCCGAG	2 cut(s)	936, 1544
NmuCI	GTSAC	2 cut(s)	14, 410
NruI	TCGCGA	1 cut(s)	35
NsiI	ATGCAT	3 cut(s)	1008, 1441, 1876
NspI	RCATGY	2 cut(s)	802, 1434
PaeR7I	CTCGAG	2 cut(s)	1225, 1305
PciI	ACATGT	1 cut(s)	798
PciSI	GCTCTTC	1 cut(s)	816
PcsI	WCGNNNNNNNCGW	2 cut(s)	191, 503
PctI	GAATGC	3 cut(s)	1258, 1771, 1876
PdmI	GAANNNNTTC	2 cut(s)	616, 1974
PfeI	GAWTC	1 cut(s)	744
PflFI	GACNNNGTC	2 cut(s)	698, 813
PscI	ACATGT	1 cut(s)	798
PsiI	TTATAA	1 cut(s)	1589
Psp6I	CCWGG	3 cut(s)	767, 1473, 1878
PspFI	CCCAGC	1 cut(s)	971
PspGI	CCWGG	3 cut(s)	767, 1473, 1878
PspN4I	GGNNCC	5 cut(s)	189, 538, 732, 961, 1845
PspPI	GGNCC	3 cut(s)	311, 1400, 1988
PstI	CTGCAG	1 cut(s)	174
PstNI	CAGNNNCTG	1 cut(s)	1103
PsuI	RGATCY	5 cut(s)	78, 730, 922, 1803, 1843
PsyI	GACNNNGTC	2 cut(s)	698, 813
RruI	TCGCGA	1 cut(s)	35
RsaI	GTAC	5 cut(s)	443, 841, 1102, 1370, 1490
RsaNI	GTAC	5 cut(s)	442, 840, 1101, 1369, 1489
RseI	CAYNNNNRTG	2 cut(s)	632, 650
SapI	GCTCTTC	1 cut(s)	816
SaqAI	TTAA	5 cut(s)	927, 1469, 1542, 1710, 1911
Sau3AI	GATC	8 cut(s)	78, 730, 922, 1126, 1219, 1694, 1803, 1843
Sau96I	GGNCC	3 cut(s)	311, 1400, 1988
ScrFI	CCNGG	4 cut(s)	769, 1475, 1726, 1880
SduI	GDGCHC	4 cut(s)	212, 421, 645, 1452
SfaNI	GCATC	4 cut(s)	246, 1426, 1606, 1729
SfcI	CTRYAG	2 cut(s)	170, 228
Sfr274I	CTCGAG	2 cut(s)	1225, 1305
SinI	GGWCC	3 cut(s)	311, 1400, 1988
SlaI	CTCGAG	2 cut(s)	1225, 1305
SmiMI	CAYNNNNRTG	2 cut(s)	632, 650
SmlI	CTYRAG	5 cut(s)	213, 422, 1225, 1305, 1799
SmoI	CTYRAG	5 cut(s)	213, 422, 1225, 1305, 1799
Sse9I	AATT	7 cut(s)	685, 832, 1143, 1174, 1771, 1974, 1993
SsiI	CCGC	4 cut(s)	56, 754, 1683, 1809
SspMI	CTAG	2 cut(s)	915, 1999
StyD4I	CCNGG	4 cut(s)	767, 1473, 1724, 1878
StyI	CCWWGG	1 cut(s)	557
TaaI	ACNGT	6 cut(s)	14, 136, 416, 1083, 1163, 1392
TaiI	ACGT	1 cut(s)	509
TaqI	TCGA	3 cut(s)	1191, 1226, 1306
TaqII	GACCGA	1 cut(s)	540
TasI	AATT	7 cut(s)	685, 832, 1143, 1174, 1771, 1974, 1993
TatI	WGTACW	2 cut(s)	441, 1368
TauI	GCSGC	1 cut(s)	59
TfiI	GAWTC	1 cut(s)	744
Tru1I	TTAA	5 cut(s)	927, 1469, 1542, 1710, 1911
Tru9I	TTAA	5 cut(s)	927, 1469, 1542, 1710, 1911
TscAI	CASTG	9 cut(s)	174, 415, 421, 1086, 1166, 1507, 1521, 1675, 1854
TseFI	GTSAC	2 cut(s)	14, 410
Tsp45I	GTSAC	2 cut(s)	14, 410
TspDTI	ATGAA	7 cut(s)	152, 501, 640, 778, 995, 1170, 1486
TspGWI	ACGGA	2 cut(s)	33, 66
TspRI	CASTG	9 cut(s)	174, 415, 421, 1086, 1166, 1507, 1521, 1675, 1854
Tth111I	GACNNNGTC	2 cut(s)	698, 813
VpaK11BI	GGWCC	3 cut(s)	311, 1400, 1988
XapI	RAATTY	4 cut(s)	685, 832, 1974, 1993
XceI	RCATGY	2 cut(s)	802, 1434
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1499, 1854
XhoI	CTCGAG	2 cut(s)	1225, 1305
XmiI	GTMKAC	1 cut(s)	1121
XmnI	GAANNNNTTC	2 cut(s)	616, 1974
XspI	CTAG	2 cut(s)	915, 1999
Zsp2I	ATGCAT	3 cut(s)	1008, 1441, 1876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.