Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000550

Physical Location & Seq

Genomic Coordinates Reverse (-)

24430493 .. 24436640

Gene Structure 6148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g33740.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGGCGAACAACGGAGGTGAAAACGGGAACTTCAGCTTTGCTCAGACCGGCCGCCAGGGTCTTCCGAAGATCCAAACCCGCAAGGAAACGACGGAGGTCTGCCACGATGACACCGCAACTCCTGTTAAGGCCAAGACAATGGACGAGCTCCACTCTCTGCAGAAGAAGAGGTCATCGCAACCCAGCACTCCCCACACCGCTACCGGCCAGCAAGTCTCGGCTTTCAACGCCATTTCCGAGGAGGATCGCCAGAAACAGCAGCTACAGTCCATCAGTGCTTCTTTGGCGTCGCTGACGAGGGAGACGGGGCCGAAGGTGGTGAGAGGTGATCCGGCGGGGAAGGCTGATGGGCGGAAAGCTGTGCATGTTGAGCATCATCTGTATGATAGCTCCCTCTTTGGGCTTAGTGATAGTGCTCTCAAGTTCACCCACATCCTCTACAACCTCTCTCCTGCTGAACTGTATGAGCAAGCTATCAAGTACGAGAAAGGTTCATTTATAACAGCATCCGGTGCCTTGGCCACACTGTCCGGAGCAAAGACAGGCCGTTCGCCAAGAGACAAACGCGTCGTGAAAGATGAAGAGACTGAATATGAGCTTTGGTGGGGGAAGGGCTCACCCAACATTGAGATGGATGAACACACTTTCTTAGTGAACAGAGAAAGAGCTGTGGATTACTTGAATTCTTTAGACAAGGTATTTGTGAATGATCAATTTCTGAATTGGGACCCAGAACATCGAATCAAAGTTCGAATTGTATCTGCAAGAGCTTATCACTCCCTCTTTATGCATAACATGTGCATCCGACCCACTCCTGAAGAGCTGGAGGATTTTGGTACTCCACACTTCACAATATACAATGCTGGGCAGTTCCCATGTAACCGTTACACTCACTACATGACTTCCTCAACCAGCATAGACCTCAATCTTGCCAGAAGGGAAATGGTCATCCTTGGTACTCAGTATGCCGGTGAAATGAAGAAAGGCCTGTTTAGTGTAATGCACTATCTCATGCCTAAGCGTGGAATCCTCTCCTTACATTCTGGCTGCAATATGGGGAAAGATGGTGATGTAGCCCTTTTCTTTGGCTTATCAGGAACTGGAAAGACAACTCTTTCTACAGATCATAATAGGTATCTAATCGGAGATGATGAACACTGCTGGAGTAACAATGGTGTGTCAAACATTGAAGGTGGTTGCTATGCTAAGTGCATTGATTTGTCAAAAGACAAGGAACCAGATATTTGGAATGCTATCAAATTTGGGACAGTTTTGGAGAATGTTGTGTTTGATGAACATACTCGAGAAGTGGATTATTCAGAGAAATCTGTTACAGAGAACACCAGGGCAGCATATCCTATAGAGTACATACCAAATGCTAAAATACCATGTGTTGGTCCTCATCCGAAAAATGTCATTCTCCTGGCCTGTGATGCATTTGGTGTGCTCCCACCTGTGAGCAAGTTGAGTTTGGCCCAAACAATGTACCATTTTATCAGCGGCTACACTGCTTTGGTTGCTGGAACTGAGGATGGTATCAAGGAACCACAAGCTACATTCTCAGCATGCTTTGGTGCAGCATTTATAATGATGCATCCAACAAGGTATGCAGCAATGTTGGCTGAAAAGATGCAAAAGCATGGGGCTACAGGATGGCTTGTGAATACAGGCTGGTCAGCAGGAAGGTATGGAACAGGTAACCGCATCAAATTAGCTCATACCAGGAAGATCATTGATGCTATCCACTCGGGGACCCTTTTGAATGCAAACTACACCAAGACTGAAGTATTTGGACTCGAGATCCCTACTAAGATTGAGGGTGTACCTGCAGAAATTCTGGATCCAATAAACACTTGGTCAGACAAGAAAGCCTACAAAGACTCACTACTGAAGTTGGGTGGTCTTTTCAAGAAGAATTTTGAGGTATTCGTGAATCACAAGATTGGGAAAGATAACAAGCTCACAGAGGAAATCCTTGCTGCGGGTCCAAATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004611 GO:0004612 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006006 GO:0006094 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016020 GO:0016036 GO:0016051 GO:0016829 GO:0016830 GO:0016831 GO:0019318 GO:0019319 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0042221 GO:0042594 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046364 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0071496 GO:0071704 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

PEPCK_ATP

Protein Analysis

666

Amino Acids

73.82

Weight (kDa)

6.95

Isoelectric Point (pI)

37.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPCK_ATP	PF01293	144 - 611	7.9e-213	Phosphoenolpyruvate carboxykinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37870 AT5G65690 AT5G65690 AT5G65690 AT5G65690
fragaria_vesca	FvH4_1g18831 FvH4_1g18850 FvH4_1g18850 FvH4_1g24570 FvH4_4g10540 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_5g33740 FvH4_7g04810
malus_domestica	MD01G1046200.v1.1 MD08G1207000.v1.1 MD15G1391200.v1.1 MD15G1405400.v1.1
prunus_persica	Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.1G541200_v2.0.a1 Prupe.6G210900_v2.0.a1 Prupe.6G211000_v2.0.a1
pyrus_communis	pycom01g07230 pycom08g17910 pycom15g26890 pycom16g22360
rosa_chinensis	RchiOBHm_Chr2g0109711 RchiOBHm_Chr2g0109721 RchiOBHm_Chr5g0054131 RchiOBHm_Chr5g0054141 RchiOBHm_Chr5g0054151 RchiOBHm_Chr7g0233021
rosa_laevigata	RLG00000001305 RLG00000017759 RLG00000017760 RLG00000030254 RLG00000030261 RLG00000030264
rosa_multiflora	Rmu_sc0000507.1_g000005 Rmu_sc0000509.1_g000040 Rmu_sc0002076.1_g000010 Rmu_sc0006889.1_g000016 Rmu_sc0006889.1_g000018 Rmu_ssc0000018.1_g000034
rosa_roxburghii	Rroxscaffold_2G00134000 Rroxscaffold_3G00227740 Rroxscaffold_4G00326310 Rroxscaffold_4G00326340
rosa_rugosa	Rorug02G0162100 Rorug02G0162200 Rorug02G0162300 Rorug07G0277900.1
rosa_samantha	Rh2AG214600 Rh2AG214700 Rh2BG224900 Rh2BG225000 Rh2BG225100 Rh2CG216800 Rh2CG216900 Rh2DG220100 Rh2DG220200 Rh5AG354400 Rh5AG354500 Rh5DG381200 Rh5DG381300 Rh7BG405700 Rh7CG452300 Rh7DG421600
rosa_wichuraiana	Rw0G009650 Rw0G009660 Rw1G004940 Rw1G004970 Rw2G016580 Rw5G033400 Rw7G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	500, 1586
AasI	GACNNNNNNGTC	1 cut(s)	566
Acc36I	ACCTGC	1 cut(s)	1834
AccB1I	GGYRCC	1 cut(s)	512
AccB7I	CCANNNNNTGG	1 cut(s)	1394
AccII	CGCG	1 cut(s)	567
AccIII	TCCGGA	1 cut(s)	530
AciI	CCGC	9 cut(s)	52, 79, 114, 198, 335, 352, 1500, 1702, 1982
AclWI	GGATC	6 cut(s)	64, 252, 323, 1795, 1835, 1848
AcoI	YGGCCR	3 cut(s)	49, 205, 519
AcsI	RAATTY	5 cut(s)	682, 1259, 1833, 1915, 1990
AcuI	CTGAAG	4 cut(s)	16, 837, 1803, 1910
AcyI	GRCGYC	1 cut(s)	287
AfaI	GTAC	6 cut(s)	482, 838, 958, 1367, 1487, 1824
AfiI	CCNNNNNNNGG	4 cut(s)	399, 1022, 1394, 1981
AflIII	ACRYGT	2 cut(s)	565, 795
AgsI	TTSAA	5 cut(s)	226, 682, 1190, 1762, 1909
AjnI	CCWGG	4 cut(s)	54, 1343, 1422, 1721
Alw21I	GWGCWC	3 cut(s)	150, 418, 1449
Alw26I	GTCTC	4 cut(s)	220, 296, 552, 578
AlwI	GGATC	6 cut(s)	64, 252, 323, 1795, 1835, 1848
AlwNI	CAGNNNCTG	1 cut(s)	1100
Ama87I	CYCGRG	3 cut(s)	1302, 1747, 1796
Aor13HI	TCCGGA	1 cut(s)	530
AoxI	GGCC	9 cut(s)	49, 129, 205, 308, 519, 544, 985, 1425, 1473
ApeKI	GCWGC	6 cut(s)	259, 1047, 1349, 1577, 1610, 1979
ApoI	RAATTY	5 cut(s)	682, 1259, 1833, 1915, 1990
ArsI	GACNNNNNNTTYG	4 cut(s)	532, 564, 683, 715
AspS9I	GGNCC	6 cut(s)	308, 727, 1397, 1474, 1752, 1985
AsuHPI	GGTGA	7 cut(s)	29, 331, 338, 418, 609, 983, 1079
AsuII	TTCGAA	1 cut(s)	751
AvaI	CYCGRG	3 cut(s)	1302, 1747, 1796
AvaII	GGWCC	4 cut(s)	727, 1397, 1752, 1985
BalI	TGGCCA	1 cut(s)	521
BamHI	GGATCC	1 cut(s)	1840
BanI	GGYRCC	1 cut(s)	512
BanII	GRGCYC	2 cut(s)	150, 617
BbsI	GAAGAC	1 cut(s)	53
Bbv12I	GWGCWC	3 cut(s)	150, 418, 1449
BbvI	GCAGC	6 cut(s)	271, 1034, 1361, 1589, 1622, 1966
BccI	CCATC	6 cut(s)	278, 341, 625, 1058, 1526, 1647
BceAI	ACGGC	1 cut(s)	531
BciT130I	CCWGG	4 cut(s)	56, 1345, 1424, 1723
BclI	TGATCA	1 cut(s)	709
BcoDI	GTCTC	4 cut(s)	220, 296, 552, 578
BfmI	CTRYAG	6 cut(s)	158, 263, 1119, 1359, 1647, 1827
BfuAI	ACCTGC	1 cut(s)	1834
BisI	GCNGC	8 cut(s)	52, 260, 1048, 1350, 1501, 1578, 1611, 1980
BlsI	GCNGC	8 cut(s)	53, 261, 1049, 1351, 1502, 1579, 1612, 1981
Bme1390I	CCNGG	4 cut(s)	56, 1345, 1424, 1723
Bme18I	GGWCC	4 cut(s)	727, 1397, 1752, 1985
BmeT110I	CYCGRG	3 cut(s)	1302, 1747, 1796
BmgT120I	GGNCC	6 cut(s)	308, 727, 1397, 1474, 1752, 1985
BmrFI	CCNGG	4 cut(s)	56, 1345, 1424, 1723
BmsI	GCATC	9 cut(s)	382, 515, 810, 1423, 1581, 1603, 1620, 1713, 1726
BoxI	GACNNNNGTC	1 cut(s)	95
BpiI	GAAGAC	1 cut(s)	53
BplI	GAGNNNNNCTC	2 cut(s)	137, 169
BpmI	CTGGAG	2 cut(s)	845, 1183
Bpu10I	CCTNAGC	1 cut(s)	1017
Bpu14I	TTCGAA	1 cut(s)	751
BpuEI	CTTGAG	1 cut(s)	404
BsaHI	GRCGYC	1 cut(s)	287
BsaJI	CCNNGG	5 cut(s)	55, 237, 516, 952, 1344
BsaWI	WCCGGW	2 cut(s)	509, 530
BsaXI	ACNNNNNCTCC	2 cut(s)	103, 133
Bsc4I	CCNNNNNNNGG	4 cut(s)	399, 1022, 1394, 1981
Bse118I	RCCGGY	3 cut(s)	47, 203, 968
Bse1I	ACTGG	1 cut(s)	1105
Bse3DI	GCAATG	1 cut(s)	1620
BseAI	TCCGGA	1 cut(s)	530
BseBI	CCWGG	4 cut(s)	56, 1345, 1424, 1723
BseDI	CCNNGG	5 cut(s)	55, 237, 516, 952, 1344
BseGI	GGATG	9 cut(s)	432, 506, 640, 801, 948, 1402, 1537, 1594, 1658
BseLI	CCNNNNNNNGG	4 cut(s)	399, 1022, 1394, 1981
BseMI	GCAATG	1 cut(s)	1620
BseMII	CTCAG	4 cut(s)	56, 974, 1518, 1575
BseNI	ACTGG	1 cut(s)	1105
BseRI	GAGGAG	1 cut(s)	254
BseX3I	CGGCCG	1 cut(s)	49
BseXI	GCAGC	6 cut(s)	271, 1034, 1361, 1589, 1622, 1966
BseYI	CCCAGC	2 cut(s)	182, 863
BsgI	GTGCAG	1 cut(s)	1596
Bsh1236I	CGCG	1 cut(s)	567
Bsh1285I	CGRYCG	1 cut(s)	52
BshFI	GGCC	9 cut(s)	51, 131, 207, 310, 521, 546, 987, 1427, 1475
BshNI	GGYRCC	1 cut(s)	512
BsiEI	CGRYCG	1 cut(s)	52
BsiHKAI	GWGCWC	3 cut(s)	150, 418, 1449
BsiHKCI	CYCGRG	3 cut(s)	1302, 1747, 1796
BsiSI	CCGG	6 cut(s)	48, 204, 332, 510, 531, 969
BslFI	GGGAC	3 cut(s)	740, 1279, 1765
BslI	CCNNNNNNNGG	4 cut(s)	399, 1022, 1394, 1981
BsmAI	GTCTC	4 cut(s)	220, 296, 552, 578
BsmBI	CGTCTC	1 cut(s)	296
BsmFI	GGGAC	3 cut(s)	740, 1279, 1765
BsmI	GAATGC	2 cut(s)	1255, 1768
BsnI	GGCC	9 cut(s)	51, 131, 207, 310, 521, 546, 987, 1427, 1475
BsoBI	CYCGRG	3 cut(s)	1302, 1747, 1796
Bsp119I	TTCGAA	1 cut(s)	751
Bsp1286I	GDGCHC	4 cut(s)	150, 418, 617, 1449
Bsp13I	TCCGGA	1 cut(s)	530
Bsp143I	GATC	8 cut(s)	69, 244, 328, 709, 1123, 1728, 1800, 1840
BspACI	CCGC	9 cut(s)	52, 79, 114, 198, 335, 352, 1500, 1702, 1982
BspANI	GGCC	9 cut(s)	51, 131, 207, 310, 521, 546, 987, 1427, 1475
BspCNI	CTCAG	4 cut(s)	55, 973, 1519, 1574
BspEI	TCCGGA	1 cut(s)	530
BspFNI	CGCG	1 cut(s)	567
BspMAI	CTGCAG	2 cut(s)	162, 1831
BspMI	ACCTGC	1 cut(s)	1834
BspPI	GGATC	6 cut(s)	64, 252, 323, 1795, 1835, 1848
BspQI	GCTCTTC	1 cut(s)	813
BspT104I	TTCGAA	1 cut(s)	751
BspT107I	GGYRCC	1 cut(s)	512
BsrDI	GCAATG	1 cut(s)	1620
BsrFI	RCCGGY	3 cut(s)	47, 203, 968
BsrI	ACTGG	1 cut(s)	1105
BssAI	RCCGGY	3 cut(s)	47, 203, 968
BssECI	CCNNGG	5 cut(s)	55, 237, 516, 952, 1344
BssMI	GATC	8 cut(s)	69, 244, 328, 709, 1123, 1728, 1800, 1840
BssNI	GRCGYC	1 cut(s)	287
BssT1I	CCWWGG	2 cut(s)	516, 952
Bst2UI	CCWGG	4 cut(s)	56, 1345, 1424, 1723
Bst4CI	ACNGT	5 cut(s)	267, 462, 528, 884, 1270
Bst6I	CTCTTC	3 cut(s)	161, 576, 813
BstACI	GRCGYC	1 cut(s)	287
BstAPI	GCANNNNNTGC	1 cut(s)	512
BstBI	TTCGAA	1 cut(s)	751
BstC8I	GCNNGC	3 cut(s)	209, 471, 1567
BstDEI	CTNAG	9 cut(s)	42, 404, 649, 960, 1017, 1206, 1527, 1561, 1809
BstEII	GGTNACC	1 cut(s)	1697
BstF5I	GGATG	9 cut(s)	432, 506, 640, 801, 948, 1402, 1537, 1594, 1658
BstFNI	CGCG	1 cut(s)	567
BstKTI	GATC	8 cut(s)	72, 247, 331, 712, 1126, 1731, 1803, 1843
BstMAI	GTCTC	4 cut(s)	220, 296, 552, 578
BstMBI	GATC	8 cut(s)	69, 244, 328, 709, 1123, 1728, 1800, 1840
BstMCI	CGRYCG	1 cut(s)	52
BstMWI	GCNNNNNNNGC	8 cut(s)	227, 284, 341, 370, 512, 1433, 1517, 1619
BstNI	CCWGG	4 cut(s)	56, 1345, 1424, 1723
BstNSI	RCATGY	3 cut(s)	368, 799, 1569
BstPAI	GACNNNNGTC	1 cut(s)	95
BstPI	GGTNACC	1 cut(s)	1697
BstSCI	CCNGG	4 cut(s)	54, 1343, 1422, 1721
BstSFI	CTRYAG	6 cut(s)	158, 263, 1119, 1359, 1647, 1827
BstUI	CGCG	1 cut(s)	567
BstV1I	GCAGC	6 cut(s)	271, 1034, 1361, 1589, 1622, 1966
BstV2I	GAAGAC	1 cut(s)	53
BstX2I	RGATCY	3 cut(s)	69, 1800, 1840
BstXI	CCANNNNNNTGG	2 cut(s)	139, 1245
BstYI	RGATCY	3 cut(s)	69, 1800, 1840
BstZI	CGGCCG	1 cut(s)	49
BsuRI	GGCC	9 cut(s)	51, 131, 207, 310, 521, 546, 987, 1427, 1475
BtgZI	GCGATG	1 cut(s)	159
BtsCI	GGATG	9 cut(s)	432, 506, 640, 801, 948, 1402, 1537, 1594, 1658
BtsI	GCAGTG	2 cut(s)	1156, 1506
BtsIMutI	CAGTG	4 cut(s)	280, 524, 1156, 1506
BveI	ACCTGC	1 cut(s)	1834
Cac8I	GCNNGC	3 cut(s)	209, 471, 1567
CaiI	CAGNNNCTG	1 cut(s)	1100
Cfr10I	RCCGGY	3 cut(s)	47, 203, 968
Cfr13I	GGNCC	6 cut(s)	308, 727, 1397, 1474, 1752, 1985
CseI	GACGC	2 cut(s)	276, 556
Csp6I	GTAC	6 cut(s)	481, 837, 957, 1366, 1486, 1823
CviAII	CATG	8 cut(s)	365, 796, 876, 898, 1012, 1389, 1566, 1640
CviQI	GTAC	6 cut(s)	481, 837, 957, 1366, 1486, 1823
DdeI	CTNAG	9 cut(s)	42, 404, 649, 960, 1017, 1206, 1527, 1561, 1809
DpnI	GATC	8 cut(s)	71, 246, 330, 711, 1125, 1730, 1802, 1842
DpnII	GATC	8 cut(s)	69, 244, 328, 709, 1123, 1728, 1800, 1840
DrdI	GACNNNNNNGTC	1 cut(s)	566
DseDI	GACNNNNNNGTC	1 cut(s)	566
EaeI	YGGCCR	3 cut(s)	49, 205, 519
EagI	CGGCCG	1 cut(s)	49
Eam1104I	CTCTTC	3 cut(s)	161, 576, 813
EarI	CTCTTC	3 cut(s)	161, 576, 813
EciI	GGCGGA	1 cut(s)	367
Ecl136II	GAGCTC	1 cut(s)	148
EclXI	CGGCCG	1 cut(s)	49
Eco130I	CCWWGG	2 cut(s)	516, 952
Eco147I	AGGCCT	1 cut(s)	987
Eco24I	GRGCYC	2 cut(s)	150, 617
Eco47I	GGWCC	4 cut(s)	727, 1397, 1752, 1985
Eco52I	CGGCCG	1 cut(s)	49
Eco53kI	GAGCTC	1 cut(s)	148
Eco57I	CTGAAG	4 cut(s)	16, 837, 1803, 1910
Eco88I	CYCGRG	3 cut(s)	1302, 1747, 1796
Eco91I	GGTNACC	1 cut(s)	1697
EcoICRI	GAGCTC	1 cut(s)	148
EcoO109I	RGGNCCY	2 cut(s)	727, 1752
EcoO65I	GGTNACC	1 cut(s)	1697
EcoRI	GAATTC	1 cut(s)	682
EcoRII	CCWGG	4 cut(s)	54, 1343, 1422, 1721
EcoT14I	CCWWGG	2 cut(s)	516, 952
EcoT22I	ATGCAT	3 cut(s)	792, 1438, 1596
EcoT38I	GRGCYC	2 cut(s)	150, 617
ErhI	CCWWGG	2 cut(s)	516, 952
Esp3I	CGTCTC	1 cut(s)	296
FaeI	CATG	8 cut(s)	368, 799, 879, 901, 1015, 1392, 1569, 1643
FaqI	GGGAC	3 cut(s)	740, 1279, 1765
FatI	CATG	8 cut(s)	364, 795, 875, 897, 1011, 1388, 1565, 1639
FauI	CCCGC	3 cut(s)	86, 328, 1975
FbaI	TGATCA	1 cut(s)	709
Fnu4HI	GCNGC	8 cut(s)	52, 260, 1048, 1350, 1501, 1578, 1611, 1980
FokI	GGATG	9 cut(s)	419, 493, 647, 788, 935, 1389, 1544, 1581, 1665
FriOI	GRGCYC	2 cut(s)	150, 617
Fsp4HI	GCNGC	8 cut(s)	52, 260, 1048, 1350, 1501, 1578, 1611, 1980
GluI	GCNGC	8 cut(s)	52, 260, 1048, 1350, 1501, 1578, 1611, 1980
GsaI	CCCAGC	2 cut(s)	186, 867
GsuI	CTGGAG	2 cut(s)	845, 1183
HaeIII	GGCC	9 cut(s)	51, 131, 207, 310, 521, 546, 987, 1427, 1475
HapII	CCGG	6 cut(s)	48, 204, 332, 510, 531, 969
HgaI	GACGC	2 cut(s)	276, 556
Hin1I	GRCGYC	1 cut(s)	287
Hin1II	CATG	8 cut(s)	368, 799, 879, 901, 1015, 1392, 1569, 1643
HinfI	GANTC	5 cut(s)	741, 1026, 1794, 1880, 1933
HpaII	CCGG	6 cut(s)	48, 204, 332, 510, 531, 969
HphI	GGTGA	7 cut(s)	29, 331, 338, 418, 609, 983, 1079
Hpy166II	GTNNAC	3 cut(s)	426, 655, 1823
Hpy188I	TCNGA	9 cut(s)	45, 66, 238, 720, 806, 1145, 1321, 1407, 1861
Hpy188III	TCNNGA	9 cut(s)	531, 571, 815, 1095, 1304, 1798, 1838, 1909, 1930
Hpy8I	GTNNAC	3 cut(s)	426, 655, 1823
Hpy99I	CGWCG	3 cut(s)	94, 292, 572
HpyAV	CCTTC	6 cut(s)	307, 334, 604, 930, 1184, 1677
HpyCH4III	ACNGT	5 cut(s)	267, 462, 528, 884, 1270
HpyF10VI	GCNNNNNNNGC	8 cut(s)	227, 284, 341, 370, 512, 1433, 1517, 1619
HpyF3I	CTNAG	9 cut(s)	42, 404, 649, 960, 1017, 1206, 1527, 1561, 1809
Hsp92I	GRCGYC	1 cut(s)	287
Hsp92II	CATG	8 cut(s)	368, 799, 879, 901, 1015, 1392, 1569, 1643
KflI	GGGWCCC	2 cut(s)	727, 1752
Kpn2I	TCCGGA	1 cut(s)	530
Ksp22I	TGATCA	1 cut(s)	709
Kzo9I	GATC	8 cut(s)	69, 244, 328, 709, 1123, 1728, 1800, 1840
LguI	GCTCTTC	1 cut(s)	813
LmnI	GCTCC	4 cut(s)	153, 395, 533, 1452
Lsp1109I	GCAGC	6 cut(s)	271, 1034, 1361, 1589, 1622, 1966
LweI	GCATC	9 cut(s)	382, 515, 810, 1423, 1581, 1603, 1620, 1713, 1726
MaeIII	GTNAC	5 cut(s)	878, 884, 1166, 1330, 1697
MalI	GATC	8 cut(s)	71, 246, 330, 711, 1125, 1730, 1802, 1842
MboI	GATC	8 cut(s)	69, 244, 328, 709, 1123, 1728, 1800, 1840
MboII	GAAGA	9 cut(s)	53, 79, 175, 178, 593, 830, 991, 1738, 1924
MflI	RGATCY	3 cut(s)	69, 1800, 1840
MhlI	GDGCHC	4 cut(s)	150, 418, 617, 1449
MlsI	TGGCCA	1 cut(s)	521
MluCI	AATT	9 cut(s)	682, 713, 721, 753, 1259, 1709, 1833, 1915, 1990
MluI	ACGCGT	1 cut(s)	565
MluNI	TGGCCA	1 cut(s)	521
MlyI	GAGTC	2 cut(s)	1788, 1874
MmeI	TCCRAC	2 cut(s)	829, 1622
Mox20I	TGGCCA	1 cut(s)	521
Mph1103I	ATGCAT	3 cut(s)	792, 1438, 1596
MroI	TCCGGA	1 cut(s)	530
MscI	TGGCCA	1 cut(s)	521
MseI	TTAA	1 cut(s)	126
MslI	CAYNNNNRTG	2 cut(s)	381, 629
Msp20I	TGGCCA	1 cut(s)	521
MspA1I	CMGCKG	1 cut(s)	1500
MspI	CCGG	6 cut(s)	48, 204, 332, 510, 531, 969
MspR9I	CCNGG	4 cut(s)	56, 1345, 1424, 1723
Mva1269I	GAATGC	2 cut(s)	1255, 1768
MvaI	CCWGG	4 cut(s)	56, 1345, 1424, 1723
MvnI	CGCG	1 cut(s)	567
MwoI	GCNNNNNNNGC	8 cut(s)	227, 284, 341, 370, 512, 1433, 1517, 1619
NdeII	GATC	8 cut(s)	69, 244, 328, 709, 1123, 1728, 1800, 1840
NlaIII	CATG	8 cut(s)	368, 799, 879, 901, 1015, 1392, 1569, 1643
NmeAIII	GCCGAG	1 cut(s)	197
NsiI	ATGCAT	3 cut(s)	792, 1438, 1596
NspI	RCATGY	3 cut(s)	368, 799, 1569
NspV	TTCGAA	1 cut(s)	751
PaeI	GCATGC	1 cut(s)	1569
PaeR7I	CTCGAG	2 cut(s)	1302, 1796
PceI	AGGCCT	1 cut(s)	987
PciI	ACATGT	1 cut(s)	795
PciSI	GCTCTTC	1 cut(s)	813
PcsI	WCGNNNNNNNCGW	1 cut(s)	234
PctI	GAATGC	2 cut(s)	1255, 1768
PfeI	GAWTC	3 cut(s)	741, 1026, 1933
PflMI	CCANNNNNTGG	1 cut(s)	1394
PkrI	GCNGC	8 cut(s)	53, 261, 1049, 1351, 1502, 1579, 1612, 1981
PleI	GAGTC	2 cut(s)	1788, 1874
PpsI	GAGTC	2 cut(s)	1788, 1874
PpuMI	RGGWCCY	2 cut(s)	727, 1752
PscI	ACATGT	1 cut(s)	795
PshAI	GACNNNNGTC	1 cut(s)	95
PsiI	TTATAA	2 cut(s)	500, 1586
Psp124BI	GAGCTC	1 cut(s)	150
Psp5II	RGGWCCY	2 cut(s)	727, 1752
Psp6I	CCWGG	4 cut(s)	54, 1343, 1422, 1721
PspEI	GGTNACC	1 cut(s)	1697
PspFI	CCCAGC	2 cut(s)	182, 863
PspGI	CCWGG	4 cut(s)	54, 1343, 1422, 1721
PspPI	GGNCC	6 cut(s)	308, 727, 1397, 1474, 1752, 1985
PspPPI	RGGWCCY	2 cut(s)	727, 1752
PstI	CTGCAG	2 cut(s)	162, 1831
PstNI	CAGNNNCTG	1 cut(s)	1100
PsuI	RGATCY	3 cut(s)	69, 1800, 1840
RsaI	GTAC	6 cut(s)	482, 838, 958, 1367, 1487, 1824
RsaNI	GTAC	6 cut(s)	481, 837, 957, 1366, 1486, 1823
RseI	CAYNNNNRTG	2 cut(s)	381, 629
SacI	GAGCTC	1 cut(s)	150
SapI	GCTCTTC	1 cut(s)	813
SaqAI	TTAA	1 cut(s)	126
SatI	GCNGC	8 cut(s)	52, 260, 1048, 1350, 1501, 1578, 1611, 1980
Sau3AI	GATC	8 cut(s)	69, 244, 328, 709, 1123, 1728, 1800, 1840
Sau96I	GGNCC	6 cut(s)	308, 727, 1397, 1474, 1752, 1985
SchI	GAGTC	2 cut(s)	1788, 1874
ScrFI	CCNGG	4 cut(s)	56, 1345, 1424, 1723
SduI	GDGCHC	4 cut(s)	150, 418, 617, 1449
SfaNI	GCATC	9 cut(s)	382, 515, 810, 1423, 1581, 1603, 1620, 1713, 1726
SfcI	CTRYAG	6 cut(s)	158, 263, 1119, 1359, 1647, 1827
Sfr274I	CTCGAG	2 cut(s)	1302, 1796
SfuI	TTCGAA	1 cut(s)	751
SinI	GGWCC	4 cut(s)	727, 1397, 1752, 1985
SlaI	CTCGAG	2 cut(s)	1302, 1796
SmiMI	CAYNNNNRTG	2 cut(s)	381, 629
SmlI	CTYRAG	3 cut(s)	419, 1302, 1796
SmoI	CTYRAG	3 cut(s)	419, 1302, 1796
SphI	GCATGC	1 cut(s)	1569
Sse9I	AATT	9 cut(s)	682, 713, 721, 753, 1259, 1709, 1833, 1915, 1990
SseBI	AGGCCT	1 cut(s)	987
SsiI	CCGC	9 cut(s)	52, 79, 114, 198, 335, 352, 1500, 1702, 1982
SstI	GAGCTC	1 cut(s)	150
StuI	AGGCCT	1 cut(s)	987
StyD4I	CCNGG	4 cut(s)	54, 1343, 1422, 1721
StyI	CCWWGG	2 cut(s)	516, 952
TaaI	ACNGT	5 cut(s)	267, 462, 528, 884, 1270
TaqI	TCGA	4 cut(s)	739, 751, 1303, 1797
TasI	AATT	9 cut(s)	682, 713, 721, 753, 1259, 1709, 1833, 1915, 1990
TatI	WGTACW	1 cut(s)	1365
TauI	GCSGC	2 cut(s)	54, 1503
TfiI	GAWTC	3 cut(s)	741, 1026, 1933
Tru1I	TTAA	1 cut(s)	126
Tru9I	TTAA	1 cut(s)	126
TscAI	CASTG	4 cut(s)	280, 531, 1163, 1513
TseI	GCWGC	6 cut(s)	259, 1047, 1349, 1577, 1610, 1979
TspDTI	ATGAA	6 cut(s)	483, 594, 651, 992, 1167, 1308
TspGWI	ACGGA	2 cut(s)	27, 107
TspRI	CASTG	4 cut(s)	280, 531, 1163, 1513
Van91I	CCANNNNNTGG	1 cut(s)	1394
VpaK11BI	GGWCC	4 cut(s)	727, 1397, 1752, 1985
XapI	RAATTY	5 cut(s)	682, 1259, 1833, 1915, 1990
XceI	RCATGY	3 cut(s)	368, 799, 1569
XcmI	CCANNNNNNNNNTGG	3 cut(s)	628, 940, 1851
XhoI	CTCGAG	2 cut(s)	1302, 1796
Zsp2I	ATGCAT	3 cut(s)	792, 1438, 1596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.