Chaperone protein dnaJ
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 102 |
| AarI | CACCTGC | 1 cut(s) | 550 |
| Acc36I | ACCTGC | 1 cut(s) | 550 |
| AciI | CCGC | 3 cut(s) | 72, 111, 1227 |
| AclWI | GGATC | 6 cut(s) | 46, 137, 185, 266, 822, 1056 |
| AcsI | RAATTY | 1 cut(s) | 1025 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 134 |
| AgsI | TTSAA | 8 cut(s) | 21, 379, 471, 486, 671, 799, 1025, 1067 |
| AjnI | CCWGG | 2 cut(s) | 544, 1222 |
| AluBI | AGCT | 7 cut(s) | 98, 421, 482, 898, 1003, 1097, 1184 |
| AluI | AGCT | 7 cut(s) | 98, 421, 482, 898, 1003, 1097, 1184 |
| Alw21I | GWGCWC | 4 cut(s) | 449, 789, 831, 1234 |
| Alw26I | GTCTC | 3 cut(s) | 593, 655, 1124 |
| AlwI | GGATC | 6 cut(s) | 46, 137, 185, 266, 822, 1056 |
| AoxI | GGCC | 3 cut(s) | 849, 983, 1059 |
| ApeKI | GCWGC | 4 cut(s) | 74, 556, 565, 1094 |
| ApoI | RAATTY | 1 cut(s) | 1025 |
| AspLEI | GCGC | 2 cut(s) | 739, 1180 |
| AspS9I | GGNCC | 2 cut(s) | 14, 542 |
| AsuC2I | CCSGG | 4 cut(s) | 335, 918, 1031, 1046 |
| AsuHPI | GGTGA | 5 cut(s) | 152, 368, 742, 821, 1211 |
| AvaII | GGWCC | 2 cut(s) | 14, 542 |
| BaeGI | GKGCMC | 1 cut(s) | 1252 |
| BanII | GRGCYC | 1 cut(s) | 1046 |
| Bbv12I | GWGCWC | 4 cut(s) | 449, 789, 831, 1234 |
| BbvI | GCAGC | 4 cut(s) | 86, 568, 577, 1106 |
| BccI | CCATC | 3 cut(s) | 132, 611, 842 |
| BceAI | ACGGC | 2 cut(s) | 475, 970 |
| BciT130I | CCWGG | 2 cut(s) | 546, 1224 |
| BclI | TGATCA | 1 cut(s) | 214 |
| BcnI | CCSGG | 4 cut(s) | 335, 918, 1031, 1046 |
| BcoDI | GTCTC | 3 cut(s) | 593, 655, 1124 |
| BfaI | CTAG | 1 cut(s) | 432 |
| BfoI | RGCGCY | 1 cut(s) | 740 |
| BfuAI | ACCTGC | 1 cut(s) | 550 |
| BglII | AGATCT | 3 cut(s) | 85, 207, 522 |
| BisI | GCNGC | 5 cut(s) | 75, 111, 557, 566, 1095 |
| BlpI | GCTNAGC | 2 cut(s) | 1040, 1233 |
| BlsI | GCNGC | 5 cut(s) | 76, 112, 558, 567, 1096 |
| Bme1390I | CCNGG | 6 cut(s) | 335, 546, 918, 1031, 1046, 1224 |
| Bme18I | GGWCC | 2 cut(s) | 14, 542 |
| BmgT120I | GGNCC | 2 cut(s) | 14, 542 |
| BmrFI | CCNGG | 6 cut(s) | 335, 546, 918, 1031, 1046, 1224 |
| BmsI | GCATC | 2 cut(s) | 220, 543 |
| BoxI | GACNNNNGTC | 1 cut(s) | 621 |
| BpmI | CTGGAG | 1 cut(s) | 498 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1040, 1233 |
| BpuEI | CTTGAG | 2 cut(s) | 74, 221 |
| BpuMI | CCSGG | 4 cut(s) | 335, 918, 1031, 1046 |
| BsaBI | GATNNNNATC | 2 cut(s) | 399, 527 |
| BsaI | GGTCTC | 1 cut(s) | 593 |
| BsaJI | CCNNGG | 5 cut(s) | 55, 334, 846, 1089, 1222 |
| BsaWI | WCCGGW | 1 cut(s) | 752 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 630, 660, 747, 777, 912, 942 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 134 |
| Bse1I | ACTGG | 1 cut(s) | 865 |
| Bse3DI | GCAATG | 1 cut(s) | 1250 |
| Bse8I | GATNNNNATC | 2 cut(s) | 399, 527 |
| BseBI | CCWGG | 2 cut(s) | 546, 1224 |
| BseDI | CCNNGG | 5 cut(s) | 55, 334, 846, 1089, 1222 |
| BseGI | GGATG | 4 cut(s) | 124, 370, 400, 1165 |
| BseJI | GATNNNNATC | 2 cut(s) | 399, 527 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 134 |
| BseMI | GCAATG | 1 cut(s) | 1250 |
| BseMII | CTCAG | 4 cut(s) | 186, 645, 1031, 1247 |
| BseNI | ACTGG | 1 cut(s) | 865 |
| BseSI | GKGCMC | 1 cut(s) | 1252 |
| BseXI | GCAGC | 4 cut(s) | 86, 568, 577, 1106 |
| BseYI | CCCAGC | 1 cut(s) | 1251 |
| BsgI | GTGCAG | 1 cut(s) | 584 |
| BshFI | GGCC | 3 cut(s) | 851, 985, 1061 |
| BsiHKAI | GWGCWC | 4 cut(s) | 449, 789, 831, 1234 |
| BsiSI | CCGG | 5 cut(s) | 334, 753, 918, 1031, 1046 |
| BslFI | GGGAC | 1 cut(s) | 629 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 134 |
| BsmAI | GTCTC | 3 cut(s) | 593, 655, 1124 |
| BsmBI | CGTCTC | 1 cut(s) | 1124 |
| BsmFI | GGGAC | 1 cut(s) | 629 |
| BsmI | GAATGC | 2 cut(s) | 696, 972 |
| BsnI | GGCC | 3 cut(s) | 851, 985, 1061 |
| Bso31I | GGTCTC | 1 cut(s) | 593 |
| Bsp1286I | GDGCHC | 6 cut(s) | 449, 789, 831, 1046, 1234, 1252 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1040, 1233 |
| BspACI | CCGC | 3 cut(s) | 72, 111, 1227 |
| BspANI | GGCC | 3 cut(s) | 851, 985, 1061 |
| BspCNI | CTCAG | 4 cut(s) | 187, 646, 1032, 1246 |
| BspHI | TCATGA | 1 cut(s) | 990 |
| BspMI | ACCTGC | 1 cut(s) | 550 |
| BspPI | GGATC | 6 cut(s) | 46, 137, 185, 266, 822, 1056 |
| BspQI | GCTCTTC | 1 cut(s) | 20 |
| BspTNI | GGTCTC | 1 cut(s) | 593 |
| BsrDI | GCAATG | 1 cut(s) | 1250 |
| BsrI | ACTGG | 1 cut(s) | 865 |
| BssECI | CCNNGG | 5 cut(s) | 55, 334, 846, 1089, 1222 |
| BssT1I | CCWWGG | 2 cut(s) | 55, 1089 |
| Bst2UI | CCWGG | 2 cut(s) | 546, 1224 |
| Bst4CI | ACNGT | 2 cut(s) | 748, 1021 |
| Bst6I | CTCTTC | 4 cut(s) | 4, 20, 295, 1122 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 562 |
| BstC8I | GCNNGC | 2 cut(s) | 570, 1182 |
| BstDEI | CTNAG | 6 cut(s) | 66, 195, 388, 654, 1040, 1233 |
| BstF5I | GGATG | 4 cut(s) | 124, 370, 400, 1165 |
| BstH2I | RGCGCY | 1 cut(s) | 740 |
| BstHHI | GCGC | 2 cut(s) | 739, 1180 |
| BstMAI | GTCTC | 3 cut(s) | 593, 655, 1124 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 562, 565, 734, 784, 1067 |
| BstNI | CCWGG | 2 cut(s) | 546, 1224 |
| BstNSI | RCATGY | 1 cut(s) | 572 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 621 |
| BstSCI | CCNGG | 6 cut(s) | 333, 544, 916, 1029, 1044, 1222 |
| BstSLI | GKGCMC | 1 cut(s) | 1252 |
| BstV1I | GCAGC | 4 cut(s) | 86, 568, 577, 1106 |
| BstX2I | RGATCY | 5 cut(s) | 51, 85, 207, 522, 814 |
| BstYI | RGATCY | 5 cut(s) | 51, 85, 207, 522, 814 |
| BsuRI | GGCC | 3 cut(s) | 851, 985, 1061 |
| BtsCI | GGATG | 4 cut(s) | 124, 370, 400, 1165 |
| BtsIMutI | CAGTG | 1 cut(s) | 724 |
| BveI | ACCTGC | 1 cut(s) | 550 |
| Cac8I | GCNNGC | 2 cut(s) | 570, 1182 |
| CciI | TCATGA | 1 cut(s) | 990 |
| CfoI | GCGC | 2 cut(s) | 739, 1180 |
| Cfr13I | GGNCC | 2 cut(s) | 14, 542 |
| CviAII | CATG | 3 cut(s) | 569, 991, 1142 |
| DdeI | CTNAG | 6 cut(s) | 66, 195, 388, 654, 1040, 1233 |
| DraI | TTTAAA | 1 cut(s) | 157 |
| Eam1104I | CTCTTC | 4 cut(s) | 4, 20, 295, 1122 |
| EarI | CTCTTC | 4 cut(s) | 4, 20, 295, 1122 |
| Eco130I | CCWWGG | 2 cut(s) | 55, 1089 |
| Eco147I | AGGCCT | 1 cut(s) | 851 |
| Eco24I | GRGCYC | 1 cut(s) | 1046 |
| Eco31I | GGTCTC | 1 cut(s) | 593 |
| Eco32I | GATATC | 1 cut(s) | 283 |
| Eco47I | GGWCC | 2 cut(s) | 14, 542 |
| EcoO109I | RGGNCCY | 1 cut(s) | 14 |
| EcoRI | GAATTC | 1 cut(s) | 1025 |
| EcoRII | CCWGG | 2 cut(s) | 544, 1222 |
| EcoRV | GATATC | 1 cut(s) | 283 |
| EcoT14I | CCWWGG | 2 cut(s) | 55, 1089 |
| EcoT38I | GRGCYC | 1 cut(s) | 1046 |
| ErhI | CCWWGG | 2 cut(s) | 55, 1089 |
| Esp3I | CGTCTC | 1 cut(s) | 1124 |
| FaeI | CATG | 3 cut(s) | 572, 994, 1145 |
| FalI | AAGNNNNNCTT | 5 cut(s) | 33, 371, 403, 1180, 1212 |
| FaqI | GGGAC | 1 cut(s) | 629 |
| FatI | CATG | 3 cut(s) | 568, 990, 1141 |
| FbaI | TGATCA | 1 cut(s) | 214 |
| Fnu4HI | GCNGC | 5 cut(s) | 75, 111, 557, 566, 1095 |
| FokI | GGATG | 4 cut(s) | 111, 357, 407, 1172 |
| FriOI | GRGCYC | 1 cut(s) | 1046 |
| Fsp4HI | GCNGC | 5 cut(s) | 75, 111, 557, 566, 1095 |
| FspBI | CTAG | 1 cut(s) | 432 |
| GlaI | GCGC | 2 cut(s) | 738, 1179 |
| GluI | GCNGC | 5 cut(s) | 75, 111, 557, 566, 1095 |
| GsaI | CCCAGC | 1 cut(s) | 1255 |
| GsuI | CTGGAG | 1 cut(s) | 498 |
| HaeII | RGCGCY | 1 cut(s) | 740 |
| HaeIII | GGCC | 3 cut(s) | 851, 985, 1061 |
| HapII | CCGG | 5 cut(s) | 334, 753, 918, 1031, 1046 |
| HhaI | GCGC | 2 cut(s) | 739, 1180 |
| Hin1II | CATG | 3 cut(s) | 572, 994, 1145 |
| Hin6I | GCGC | 2 cut(s) | 737, 1178 |
| HinP1I | GCGC | 2 cut(s) | 737, 1178 |
| HindIII | AAGCTT | 1 cut(s) | 96 |
| HinfI | GANTC | 3 cut(s) | 938, 1034, 1135 |
| HpaII | CCGG | 5 cut(s) | 334, 753, 918, 1031, 1046 |
| HphI | GGTGA | 5 cut(s) | 152, 368, 742, 821, 1211 |
| Hpy166II | GTNNAC | 5 cut(s) | 266, 311, 626, 722, 1150 |
| Hpy188I | TCNGA | 5 cut(s) | 323, 407, 655, 705, 1053 |
| Hpy8I | GTNNAC | 5 cut(s) | 266, 311, 626, 722, 1150 |
| HpyCH4III | ACNGT | 2 cut(s) | 748, 1021 |
| HpyCH4V | TGCA | 8 cut(s) | 233, 556, 565, 585, 633, 694, 1141, 1243 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 562, 565, 734, 784, 1067 |
| HpyF3I | CTNAG | 6 cut(s) | 66, 195, 388, 654, 1040, 1233 |
| Hsp92II | CATG | 3 cut(s) | 572, 994, 1145 |
| HspAI | GCGC | 2 cut(s) | 737, 1178 |
| Ksp22I | TGATCA | 1 cut(s) | 214 |
| LguI | GCTCTTC | 1 cut(s) | 20 |
| LmnI | GCTCC | 3 cut(s) | 479, 784, 826 |
| Lsp1109I | GCAGC | 4 cut(s) | 86, 568, 577, 1106 |
| LweI | GCATC | 2 cut(s) | 220, 543 |
| MaeI | CTAG | 1 cut(s) | 432 |
| MaeIII | GTNAC | 2 cut(s) | 455, 748 |
| MflI | RGATCY | 5 cut(s) | 51, 85, 207, 522, 814 |
| MhlI | GDGCHC | 6 cut(s) | 449, 789, 831, 1046, 1234, 1252 |
| MluCI | AATT | 1 cut(s) | 1025 |
| MlyI | GAGTC | 1 cut(s) | 1129 |
| MseI | TTAA | 2 cut(s) | 156, 185 |
| MspI | CCGG | 5 cut(s) | 334, 753, 918, 1031, 1046 |
| MspR9I | CCNGG | 6 cut(s) | 335, 546, 918, 1031, 1046, 1224 |
| Mva1269I | GAATGC | 2 cut(s) | 696, 972 |
| MvaI | CCWGG | 2 cut(s) | 546, 1224 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 562, 565, 734, 784, 1067 |
| NciI | CCSGG | 4 cut(s) | 335, 918, 1031, 1046 |
| NlaIII | CATG | 3 cut(s) | 572, 994, 1145 |
| NmuCI | GTSAC | 1 cut(s) | 748 |
| NspI | RCATGY | 1 cut(s) | 572 |
| PaeI | GCATGC | 1 cut(s) | 572 |
| PagI | TCATGA | 1 cut(s) | 990 |
| PaqCI | CACCTGC | 1 cut(s) | 550 |
| PceI | AGGCCT | 1 cut(s) | 851 |
| PciSI | GCTCTTC | 1 cut(s) | 20 |
| PctI | GAATGC | 2 cut(s) | 696, 972 |
| PfeI | GAWTC | 2 cut(s) | 938, 1034 |
| PfoI | TCCNGGA | 1 cut(s) | 1029 |
| PkrI | GCNGC | 5 cut(s) | 76, 112, 558, 567, 1096 |
| PleI | GAGTC | 1 cut(s) | 1129 |
| PpsI | GAGTC | 1 cut(s) | 1129 |
| PpuMI | RGGWCCY | 1 cut(s) | 14 |
| PshAI | GACNNNNGTC | 1 cut(s) | 621 |
| PsiI | TTATAA | 1 cut(s) | 102 |
| Psp5II | RGGWCCY | 1 cut(s) | 14 |
| Psp6I | CCWGG | 2 cut(s) | 544, 1222 |
| PspFI | CCCAGC | 1 cut(s) | 1251 |
| PspGI | CCWGG | 2 cut(s) | 544, 1222 |
| PspPI | GGNCC | 2 cut(s) | 14, 542 |
| PspPPI | RGGWCCY | 1 cut(s) | 14 |
| PsuI | RGATCY | 5 cut(s) | 51, 85, 207, 522, 814 |
| SapI | GCTCTTC | 1 cut(s) | 20 |
| SaqAI | TTAA | 2 cut(s) | 156, 185 |
| SatI | GCNGC | 5 cut(s) | 75, 111, 557, 566, 1095 |
| Sau96I | GGNCC | 2 cut(s) | 14, 542 |
| SchI | GAGTC | 1 cut(s) | 1129 |
| ScrFI | CCNGG | 6 cut(s) | 335, 546, 918, 1031, 1046, 1224 |
| SduI | GDGCHC | 6 cut(s) | 449, 789, 831, 1046, 1234, 1252 |
| SfaNI | GCATC | 2 cut(s) | 220, 543 |
| SinI | GGWCC | 2 cut(s) | 14, 542 |
| SmlI | CTYRAG | 2 cut(s) | 89, 236 |
| SmoI | CTYRAG | 2 cut(s) | 89, 236 |
| SphI | GCATGC | 1 cut(s) | 572 |
| Sse9I | AATT | 1 cut(s) | 1025 |
| SseBI | AGGCCT | 1 cut(s) | 851 |
| SsiI | CCGC | 3 cut(s) | 72, 111, 1227 |
| SspMI | CTAG | 1 cut(s) | 432 |
| StuI | AGGCCT | 1 cut(s) | 851 |
| StyD4I | CCNGG | 6 cut(s) | 333, 544, 916, 1029, 1044, 1222 |
| StyI | CCWWGG | 2 cut(s) | 55, 1089 |
| TaaI | ACNGT | 2 cut(s) | 748, 1021 |
| TaqI | TCGA | 1 cut(s) | 527 |
| TasI | AATT | 1 cut(s) | 1025 |
| TauI | GCSGC | 1 cut(s) | 113 |
| TfiI | GAWTC | 2 cut(s) | 938, 1034 |
| Tru1I | TTAA | 2 cut(s) | 156, 185 |
| Tru9I | TTAA | 2 cut(s) | 156, 185 |
| TscAI | CASTG | 1 cut(s) | 724 |
| TseFI | GTSAC | 1 cut(s) | 748 |
| TseI | GCWGC | 4 cut(s) | 74, 556, 565, 1094 |
| Tsp45I | GTSAC | 1 cut(s) | 748 |
| TspDTI | ATGAA | 9 cut(s) | 192, 359, 503, 533, 747, 930, 979, 1007, 1181 |
| TspRI | CASTG | 1 cut(s) | 724 |
| VpaK11BI | GGWCC | 2 cut(s) | 14, 542 |
| XapI | RAATTY | 1 cut(s) | 1025 |
| XceI | RCATGY | 1 cut(s) | 572 |
| XspI | CTAG | 1 cut(s) | 432 |