FvH4_3g26170

DnaJ protein homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000572
Physical Location & Seq
Forward (+)
19058878 .. 19061656
2779 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g26170.t1

Sequence Viewer

Length: 1272 bp
ATGTTCGGAGGAGGTAGGGCGGCCAAGAAGAGCGATAACTCAAAGTACTATGAGGTTCTGGGAGTCTCCAAGACTGCTTCCCCTGATGATTTGAAGAAGGCTTACAAGAAAGCCGCCATCAAAAACCATCCTGATAAGGGCGGAGATCCTGAAAAATTTAAAGAGTTGGCTCAGGCTTATGAGGTTTTGAGTGACCCGGAGAAGCGTGAAATATATGATCAGTACGGTGAGGATGGCCTGAAGGATGGTGGGCCACCGGGCCATGACCCATTTGATATCTTCTCGTCATTCTTTGGTGGTGGTGGCAGCCCATTTGGAGGCATGCCGGGTGGTGGTAGTAGCAGAGGAAGGCGCCAGAGACGTGGAGAGGATGTGGTTCACTCATTGAAGGTCTCTTTGGAAGACCTATATCTTGGAACCTCGAAGAAACTTTCCCTGTCACGGAATGTGTTGTGCTCCAAGTGCAAAGGTAAGGGGTCAAAATCCGGTGCCTCGACCAAGTGTGGTGGTTGCCAAGGAACTGGTATGAAGGTCACTATTAGGCATCTTGGACCCTCTATGATTCAACAGATGCAGCATGCTTGCAATGAATGCAAGGGTACTGGGGAGACCATCAGTGACAAGGACCGCTGTGGACAGTGCAAGGGAGAGAAGGTTGCTCAAGAAAAGAAGGTCTTGGAAGTTCATGTCGAGAAGGGTATGCAGAATGGACAGAAGATCACGTTTCCTGGTGAAGCTGATGAAGCTCCTGACACAATCACTGGTGATATAGTATTCATCATTCAGCAAAAGGAACATCCCAAATTCAAGAGAAAGGGTGATGACCTTTTTGTGGAACACTCTTTGTTGCTGACGGATGCTCTATGTGGTTTCCAGTTTGTGCTGAACCATTTGGATGGCAGACAGCTACTTATCAAATCCAACCCTGGTGAAGTTGTGAAGCCTGATTCGTTTAAGGCTGTCAATGATGAGGGCATGCCAATGTATGGGAGGCCTTTCATGAAGGGCAAGCTATACATCCATTTCTCAGTCGAGTTCCCTGAAACGCTGAGCCTTGAGCAGGTCAAGGCTTTAGAAGCTGCTCTTCCAACAAGGGCATCATCTCAGCAGCTGACAGATATGGAGCTGGATGAGTGTGAAGAGACGACTCTCCATGATGTGAACATGGAGGAGGAGATGAGGAGGAAACAGCACCACGCGCATTCGGAGGCCTATGATGAGGACGAAGACATGCCTGGTGGTGCGCAGAGGGTGCAATGCGCGCAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

424

Amino Acids

46.51

Weight (kDa)

6.19

Isoelectric Point (pI)

34.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 15 - 73 1.1e-22 DnaJ domain
DnaJ_C PF01556 126 - 347 1.4e-35 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 152 - 218 6.3e-14 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000572)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44110 AT3G44110 AT5G22060
fragaria_vesca FvH4_3g26170 FvH4_3g26170 FvH4_3g26170 FvH4_3g26220 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270
malus_domestica MD02G1258400.v1.1 MD03G1159100.v1.1 MD07G1062300.v1.1 MD11G1174700.v1.1
prunus_persica Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.6G146900_v2.0.a1 Prupe.6G146900_v2.0.a1
pyrus_communis pycom02g21960 pycom03g11140 pycom07g04780 pycom11g14940
rosa_chinensis RchiOBHm_Chr1g0332041 RchiOBHm_Chr1g0364381 RchiOBHm_Chr4g0428981 RchiOBHm_Chr5g0049001 RchiOBHm_Chr5g0049021
rosa_laevigata RLG00000007108 RLG00000013380 RLG00000027486 RLG00000029697 RLG00000034581 RLG00000034584
rosa_multiflora Rmu_co8449175.1_g000001 Rmu_sc0000441.1_g000032 Rmu_sc0000530.1_g000003 Rmu_sc0003358.1_g000010 Rmu_sc0004058.1_g000007 Rmu_sc0004522.1_g000007 Rmu_sc0008629.1_g000009 Rmu_sc0009489.1_g000007 Rmu_sc0014815.1_g000013
rosa_roxburghii Rroxscaffold_1G00032850 Rroxscaffold_1G00032870 Rroxscaffold_4G00292340 Rroxscaffold_4G00318430 Rroxscaffold_5G00370640
rosa_rugosa Rorug01G0097800 Rorug01G0097900 Rorug01G0098000 Rorug01G0315800 Rorug04G0231300 Rorug05G0241800 Rorug05G0241900 Rorug05G0242000 Rorug05G0242100.1 Rorug05G0242200 Rorug05G0242300 Rorug06G0102700 Rorug06G0102800
rosa_samantha Rh1AG121800 Rh1BG093200 Rh1CG303100 Rh1DG127500 Rh4BG293700 Rh4DG290600 Rh5AG322000 Rh5CG357500 Rh5CG357600 Rh5DG344100 Rh6BG218000
rosa_wichuraiana Rw0G008830 Rw1G009930 Rw1G028700 Rw5G030390 Rw5G030400 Rw6G018630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1245
Acc36I ACCTGC 1 cut(s) 1051
AccB1I GGYRCC 2 cut(s) 351, 488
AccB7I CCANNNNNTGG 1 cut(s) 986
AccII CGCG 2 cut(s) 1199, 1262
AciI CCGC 4 cut(s) 20, 114, 141, 628
AclWI GGATC 1 cut(s) 140
AcoI YGGCCR 1 cut(s) 21
AcsI RAATTY 2 cut(s) 155, 803
AcuI CTGAAG 1 cut(s) 260
AcyI GRCGYC 1 cut(s) 352
AfaI GTAC 3 cut(s) 47, 224, 601
AfiI CCNNNNNNNGG 7 cut(s) 137, 317, 332, 441, 832, 986, 1060
AgsI TTSAA 4 cut(s) 94, 388, 566, 808
AjiI CACGTC 1 cut(s) 362
AjnI CCWGG 3 cut(s) 727, 925, 1234
AjuI GAANNNNNNNTTGG 2 cut(s) 380, 412
AluBI AGCT 7 cut(s) 737, 746, 907, 1012, 1079, 1111, 1126
AluI AGCT 7 cut(s) 737, 746, 907, 1012, 1079, 1111, 1126
Alw21I GWGCWC 1 cut(s) 458
Alw26I GTCTC 5 cut(s) 70, 352, 397, 602, 1136
AlwI GGATC 1 cut(s) 140
AlwNI CAGNNNCTG 1 cut(s) 1111
AoxI GGCC 6 cut(s) 21, 235, 251, 259, 992, 1209
ApeKI GCWGC 5 cut(s) 306, 574, 1079, 1108, 1264
ApoI RAATTY 2 cut(s) 155, 803
AspLEI GCGC 5 cut(s) 354, 1201, 1246, 1262, 1264
AspS9I GGNCC 4 cut(s) 251, 259, 551, 625
AsuC2I CCSGG 3 cut(s) 197, 258, 327
AsuHPI GGTGA 5 cut(s) 239, 743, 776, 830, 941
AvaII GGWCC 2 cut(s) 551, 625
BanI GGYRCC 2 cut(s) 351, 488
BarI GAAGNNNNNNTAC 2 cut(s) 86, 118
BbsI GAAGAC 2 cut(s) 408, 1233
Bbv12I GWGCWC 1 cut(s) 458
BbvI GCAGC 4 cut(s) 318, 586, 1066, 1120
BccI CCATC 6 cut(s) 125, 135, 227, 239, 620, 890
BciT130I CCWGG 3 cut(s) 729, 927, 1236
BclI TGATCA 1 cut(s) 217
BcnI CCSGG 3 cut(s) 197, 258, 327
BcoDI GTCTC 5 cut(s) 70, 352, 397, 602, 1136
BfoI RGCGCY 1 cut(s) 355
BfuAI ACCTGC 1 cut(s) 1051
BisI GCNGC 7 cut(s) 21, 114, 307, 575, 1080, 1109, 1265
BlpI GCTNAGC 1 cut(s) 1049
BlsI GCNGC 7 cut(s) 22, 115, 308, 576, 1081, 1110, 1266
BmcAI AGTACT 1 cut(s) 47
Bme1390I CCNGG 6 cut(s) 197, 258, 327, 729, 927, 1236
Bme18I GGWCC 2 cut(s) 551, 625
BmgBI CACGTC 1 cut(s) 362
BmgT120I GGNCC 4 cut(s) 251, 259, 551, 625
BmiI GGNNCC 4 cut(s) 353, 418, 490, 553
BmrFI CCNGG 6 cut(s) 197, 258, 327, 729, 927, 1236
BmrI ACTGGG 1 cut(s) 612
BmsI GCATC 4 cut(s) 553, 561, 847, 1106
BmuI ACTGGG 1 cut(s) 612
BpiI GAAGAC 2 cut(s) 408, 1233
Bpu10I CCTNAGC 1 cut(s) 171
Bpu1102I GCTNAGC 1 cut(s) 1049
BpuEI CTTGAG 2 cut(s) 645, 1076
BpuMI CCSGG 3 cut(s) 197, 258, 327
BsaHI GRCGYC 1 cut(s) 352
BsaI GGTCTC 2 cut(s) 397, 602
BsaJI CCNNGG 2 cut(s) 514, 925
BsaWI WCCGGW 1 cut(s) 485
BsaXI ACNNNNNCTCC 4 cut(s) 357, 387, 639, 669
Bsc4I CCNNNNNNNGG 7 cut(s) 137, 317, 332, 441, 832, 986, 1060
Bse1I ACTGG 4 cut(s) 526, 607, 766, 874
Bse3DI GCAATG 2 cut(s) 592, 1262
BseBI CCWGG 3 cut(s) 729, 927, 1236
BseDI CCNNGG 2 cut(s) 514, 925
BseGI GGATG 9 cut(s) 127, 238, 250, 376, 796, 862, 901, 1017, 1135
BseLI CCNNNNNNNGG 7 cut(s) 137, 317, 332, 441, 832, 986, 1060
BseMI GCAATG 2 cut(s) 592, 1262
BseMII CTCAG 4 cut(s) 185, 1040, 1041, 1118
BseNI ACTGG 4 cut(s) 526, 607, 766, 874
BsePI GCGCGC 1 cut(s) 1260
BseRI GAGGAG 4 cut(s) 24, 1184, 1187, 1195
BseXI GCAGC 4 cut(s) 318, 586, 1066, 1120
Bsh1236I CGCG 2 cut(s) 1199, 1262
BshFI GGCC 6 cut(s) 23, 237, 253, 261, 994, 1211
BshNI GGYRCC 2 cut(s) 351, 488
BsiHKAI GWGCWC 1 cut(s) 458
BsiSI CCGG 4 cut(s) 197, 257, 326, 486
BslI CCNNNNNNNGG 7 cut(s) 137, 317, 332, 441, 832, 986, 1060
BsmAI GTCTC 5 cut(s) 70, 352, 397, 602, 1136
BsmBI CGTCTC 2 cut(s) 352, 1136
BsmI GAATGC 2 cut(s) 596, 1201
BsnI GGCC 6 cut(s) 23, 237, 253, 261, 994, 1211
Bso31I GGTCTC 2 cut(s) 397, 602
Bsp1286I GDGCHC 1 cut(s) 458
Bsp143I GATC 3 cut(s) 145, 217, 717
Bsp1720I GCTNAGC 1 cut(s) 1049
BspACI CCGC 4 cut(s) 20, 114, 141, 628
BspANI GGCC 6 cut(s) 23, 237, 253, 261, 994, 1211
BspCNI CTCAG 4 cut(s) 184, 1040, 1041, 1117
BspFNI CGCG 2 cut(s) 1199, 1262
BspHI TCATGA 1 cut(s) 999
BspLI GGNNCC 4 cut(s) 353, 418, 490, 553
BspMI ACCTGC 1 cut(s) 1051
BspPI GGATC 1 cut(s) 140
BspQI GCTCTTC 2 cut(s) 23, 1089
BspT107I GGYRCC 2 cut(s) 351, 488
BspTNI GGTCTC 2 cut(s) 397, 602
BsrDI GCAATG 2 cut(s) 592, 1262
BsrI ACTGG 4 cut(s) 526, 607, 766, 874
BssECI CCNNGG 2 cut(s) 514, 925
BssHII GCGCGC 1 cut(s) 1260
BssMI GATC 3 cut(s) 145, 217, 717
BssNI GRCGYC 1 cut(s) 352
BssT1I CCWWGG 1 cut(s) 514
Bst2UI CCWGG 3 cut(s) 729, 927, 1236
Bst4CI ACNGT 2 cut(s) 227, 639
Bst6I CTCTTC 3 cut(s) 23, 1089, 1134
BstACI GRCGYC 1 cut(s) 352
BstAPI GCANNNNNTGC 2 cut(s) 591, 1252
BstC8I GCNNGC 6 cut(s) 323, 579, 583, 977, 1010, 1262
BstDEI CTNAG 4 cut(s) 171, 1027, 1049, 1104
BstENI CCTNNNNNAGG 1 cut(s) 1058
BstF5I GGATG 9 cut(s) 127, 238, 250, 376, 796, 862, 901, 1017, 1135
BstFNI CGCG 2 cut(s) 1199, 1262
BstH2I RGCGCY 1 cut(s) 355
BstHHI GCGC 5 cut(s) 354, 1201, 1246, 1262, 1264
BstKTI GATC 3 cut(s) 148, 220, 720
BstMAI GTCTC 5 cut(s) 70, 352, 397, 602, 1136
BstMBI GATC 3 cut(s) 145, 217, 717
BstMWI GCNNNNNNNGC 7 cut(s) 462, 591, 743, 1076, 1198, 1252, 1261
BstNI CCWGG 3 cut(s) 729, 927, 1236
BstNSI RCATGY 4 cut(s) 325, 581, 979, 1234
BstSCI CCNGG 6 cut(s) 195, 256, 325, 727, 925, 1234
BstUI CGCG 2 cut(s) 1199, 1262
BstV1I GCAGC 4 cut(s) 318, 586, 1066, 1120
BstV2I GAAGAC 2 cut(s) 408, 1233
BstX2I RGATCY 1 cut(s) 145
BstXI CCANNNNNNTGG 3 cut(s) 362, 521, 896
BstYI RGATCY 1 cut(s) 145
BsuRI GGCC 6 cut(s) 23, 237, 253, 261, 994, 1211
BtrI CACGTC 1 cut(s) 362
BtsCI GGATG 9 cut(s) 127, 238, 250, 376, 796, 862, 901, 1017, 1135
BtsIMutI CAGTG 3 cut(s) 622, 644, 759
BveI ACCTGC 1 cut(s) 1051
Cac8I GCNNGC 6 cut(s) 323, 579, 583, 977, 1010, 1262
CaiI CAGNNNCTG 1 cut(s) 1111
CciI TCATGA 1 cut(s) 999
CfoI GCGC 5 cut(s) 354, 1201, 1246, 1262, 1264
Cfr13I GGNCC 4 cut(s) 251, 259, 551, 625
Csp6I GTAC 3 cut(s) 46, 223, 600
CspCI CAANNNNNGTGG 2 cut(s) 487, 522
CviAII CATG 9 cut(s) 263, 322, 578, 686, 976, 1000, 1154, 1165, 1231
CviQI GTAC 3 cut(s) 46, 223, 600
DdeI CTNAG 4 cut(s) 171, 1027, 1049, 1104
DinI GGCGCC 1 cut(s) 353
DpnI GATC 3 cut(s) 147, 219, 719
DpnII GATC 3 cut(s) 145, 217, 717
DraI TTTAAA 1 cut(s) 160
EaeI YGGCCR 1 cut(s) 21
Eam1104I CTCTTC 3 cut(s) 23, 1089, 1134
EarI CTCTTC 3 cut(s) 23, 1089, 1134
EciI GGCGGA 1 cut(s) 156
Eco130I CCWWGG 1 cut(s) 514
Eco147I AGGCCT 2 cut(s) 994, 1211
Eco31I GGTCTC 2 cut(s) 397, 602
Eco32I GATATC 1 cut(s) 277
Eco47I GGWCC 2 cut(s) 551, 625
Eco57I CTGAAG 1 cut(s) 260
EcoNI CCTNNNNNAGG 1 cut(s) 1058
EcoRII CCWGG 3 cut(s) 727, 925, 1234
EcoRV GATATC 1 cut(s) 277
EcoT14I CCWWGG 1 cut(s) 514
EgeI GGCGCC 1 cut(s) 353
EheI GGCGCC 1 cut(s) 353
ErhI CCWWGG 1 cut(s) 514
Esp3I CGTCTC 2 cut(s) 352, 1136
FaeI CATG 9 cut(s) 266, 325, 581, 689, 979, 1003, 1157, 1168, 1234
FalI AAGNNNNNCTT 4 cut(s) 659, 691, 1068, 1100
FatI CATG 9 cut(s) 262, 321, 577, 685, 975, 999, 1153, 1164, 1230
FbaI TGATCA 1 cut(s) 217
Fnu4HI GCNGC 7 cut(s) 21, 114, 307, 575, 1080, 1109, 1265
FokI GGATG 9 cut(s) 114, 245, 257, 383, 783, 869, 908, 1004, 1142
Fsp4HI GCNGC 7 cut(s) 21, 114, 307, 575, 1080, 1109, 1265
FspI TGCGCA 1 cut(s) 1245
GlaI GCGC 5 cut(s) 353, 1200, 1245, 1261, 1263
GluI GCNGC 7 cut(s) 21, 114, 307, 575, 1080, 1109, 1265
HaeII RGCGCY 1 cut(s) 355
HaeIII GGCC 6 cut(s) 23, 237, 253, 261, 994, 1211
HapII CCGG 4 cut(s) 197, 257, 326, 486
HhaI GCGC 5 cut(s) 354, 1201, 1246, 1262, 1264
Hin1I GRCGYC 1 cut(s) 352
Hin1II CATG 9 cut(s) 266, 325, 581, 689, 979, 1003, 1157, 1168, 1234
Hin6I GCGC 5 cut(s) 352, 1199, 1244, 1260, 1262
HinP1I GCGC 5 cut(s) 352, 1199, 1244, 1260, 1262
HinfI GANTC 4 cut(s) 63, 562, 947, 1147
HpaII CCGG 4 cut(s) 197, 257, 326, 486
HphI GGTGA 5 cut(s) 239, 743, 776, 830, 941
Hpy166II GTNNAC 3 cut(s) 379, 635, 1162
Hpy188I TCNGA 2 cut(s) 8, 1207
Hpy188III TCNNGA 7 cut(s) 131, 149, 662, 691, 749, 808, 1000
Hpy8I GTNNAC 3 cut(s) 379, 635, 1162
HpyAV CCTTC 9 cut(s) 91, 235, 342, 382, 523, 646, 664, 688, 997
HpyCH4III ACNGT 2 cut(s) 227, 639
HpyCH4IV ACGT 2 cut(s) 361, 722
HpyCH4V TGCA 7 cut(s) 465, 574, 585, 594, 642, 703, 1255
HpyF10VI GCNNNNNNNGC 7 cut(s) 462, 591, 743, 1076, 1198, 1252, 1261
HpyF3I CTNAG 4 cut(s) 171, 1027, 1049, 1104
HpySE526I ACGT 2 cut(s) 361, 722
Hsp92I GRCGYC 1 cut(s) 352
Hsp92II CATG 9 cut(s) 266, 325, 581, 689, 979, 1003, 1157, 1168, 1234
HspAI GCGC 5 cut(s) 352, 1199, 1244, 1260, 1262
KasI GGCGCC 1 cut(s) 351
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 3 cut(s) 145, 217, 717
LguI GCTCTTC 2 cut(s) 23, 1089
LmnI GCTCC 3 cut(s) 461, 751, 1123
Lsp1109I GCAGC 4 cut(s) 318, 586, 1066, 1120
LweI GCATC 4 cut(s) 553, 561, 847, 1106
MaeII ACGT 2 cut(s) 361, 722
MaeIII GTNAC 4 cut(s) 191, 438, 532, 617
MalI GATC 3 cut(s) 147, 219, 719
MboI GATC 3 cut(s) 145, 217, 717
MboII GAAGA 9 cut(s) 40, 106, 271, 413, 436, 727, 1076, 1151, 1238
MflI RGATCY 1 cut(s) 145
MhlI GDGCHC 1 cut(s) 458
MluCI AATT 2 cut(s) 155, 803
Mly113I GGCGCC 1 cut(s) 352
MlyI GAGTC 2 cut(s) 72, 1141
MmeI TCCRAC 2 cut(s) 945, 1112
MseI TTAA 2 cut(s) 159, 954
MslI CAYNNNNRTG 2 cut(s) 894, 980
MspA1I CMGCKG 2 cut(s) 630, 1111
MspI CCGG 4 cut(s) 197, 257, 326, 486
MspR9I CCNGG 6 cut(s) 197, 258, 327, 729, 927, 1236
Mva1269I GAATGC 2 cut(s) 596, 1201
MvaI CCWGG 3 cut(s) 729, 927, 1236
MvnI CGCG 2 cut(s) 1199, 1262
MwoI GCNNNNNNNGC 7 cut(s) 462, 591, 743, 1076, 1198, 1252, 1261
NarI GGCGCC 1 cut(s) 352
NciI CCSGG 3 cut(s) 197, 258, 327
NdeII GATC 3 cut(s) 145, 217, 717
NlaIII CATG 9 cut(s) 266, 325, 581, 689, 979, 1003, 1157, 1168, 1234
NlaIV GGNNCC 4 cut(s) 353, 418, 490, 553
NmuCI GTSAC 4 cut(s) 191, 438, 532, 617
NsbI TGCGCA 1 cut(s) 1245
NspI RCATGY 4 cut(s) 325, 581, 979, 1234
PaeI GCATGC 3 cut(s) 325, 581, 979
PagI TCATGA 1 cut(s) 999
PauI GCGCGC 1 cut(s) 1260
PceI AGGCCT 2 cut(s) 994, 1211
PciSI GCTCTTC 2 cut(s) 23, 1089
PctI GAATGC 2 cut(s) 596, 1201
PfeI GAWTC 2 cut(s) 562, 947
PflMI CCANNNNNTGG 1 cut(s) 986
PkrI GCNGC 7 cut(s) 22, 115, 308, 576, 1081, 1110, 1266
PleI GAGTC 2 cut(s) 71, 1141
PluTI GGCGCC 1 cut(s) 355
PpsI GAGTC 2 cut(s) 71, 1141
Psp6I CCWGG 3 cut(s) 727, 925, 1234
PspGI CCWGG 3 cut(s) 727, 925, 1234
PspN4I GGNNCC 4 cut(s) 353, 418, 490, 553
PspPI GGNCC 4 cut(s) 251, 259, 551, 625
PstNI CAGNNNCTG 1 cut(s) 1111
PsuI RGATCY 1 cut(s) 145
PteI GCGCGC 1 cut(s) 1260
PvuII CAGCTG 1 cut(s) 1111
RsaI GTAC 3 cut(s) 47, 224, 601
RsaNI GTAC 3 cut(s) 46, 223, 600
RseI CAYNNNNRTG 2 cut(s) 894, 980
SapI GCTCTTC 2 cut(s) 23, 1089
SaqAI TTAA 2 cut(s) 159, 954
SatI GCNGC 7 cut(s) 21, 114, 307, 575, 1080, 1109, 1265
Sau3AI GATC 3 cut(s) 145, 217, 717
Sau96I GGNCC 4 cut(s) 251, 259, 551, 625
ScaI AGTACT 1 cut(s) 47
SchI GAGTC 2 cut(s) 72, 1141
ScrFI CCNGG 6 cut(s) 197, 258, 327, 729, 927, 1236
SduI GDGCHC 1 cut(s) 458
SfaNI GCATC 4 cut(s) 553, 561, 847, 1106
SfoI GGCGCC 1 cut(s) 353
SinI GGWCC 2 cut(s) 551, 625
SmiMI CAYNNNNRTG 2 cut(s) 894, 980
SmlI CTYRAG 2 cut(s) 660, 1055
SmoI CTYRAG 2 cut(s) 660, 1055
SphI GCATGC 3 cut(s) 325, 581, 979
Sse9I AATT 2 cut(s) 155, 803
SseBI AGGCCT 2 cut(s) 994, 1211
SsiI CCGC 4 cut(s) 20, 114, 141, 628
SspDI GGCGCC 1 cut(s) 351
StuI AGGCCT 2 cut(s) 994, 1211
StyD4I CCNGG 6 cut(s) 195, 256, 325, 727, 925, 1234
StyI CCWWGG 1 cut(s) 514
TaaI ACNGT 2 cut(s) 227, 639
TaiI ACGT 2 cut(s) 364, 725
TaqI TCGA 4 cut(s) 422, 494, 690, 1032
TasI AATT 2 cut(s) 155, 803
TatI WGTACW 1 cut(s) 45
TauI GCSGC 2 cut(s) 23, 116
TfiI GAWTC 2 cut(s) 562, 947
Tru1I TTAA 2 cut(s) 159, 954
Tru9I TTAA 2 cut(s) 159, 954
TscAI CASTG 3 cut(s) 622, 644, 766
TseFI GTSAC 4 cut(s) 191, 438, 532, 617
TseI GCWGC 5 cut(s) 306, 574, 1079, 1108, 1264
Tsp45I GTSAC 4 cut(s) 191, 438, 532, 617
TspDTI ATGAA 7 cut(s) 542, 603, 674, 756, 766, 988, 1016
TspGWI ACGGA 2 cut(s) 457, 869
TspRI CASTG 3 cut(s) 622, 644, 766
Van91I CCANNNNNTGG 1 cut(s) 986
VpaK11BI GGWCC 2 cut(s) 551, 625
XagI CCTNNNNNAGG 1 cut(s) 1058
XapI RAATTY 2 cut(s) 155, 803
XceI RCATGY 4 cut(s) 325, 581, 979, 1234
ZrmI AGTACT 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.