Rw5G030400

DnaJ protein homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000572
Physical Location & Seq
Forward (+)
48240744 .. 48242768
2025 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G030400.1

Sequence Viewer

Length: 1269 bp
ATGTTCGGAGGAGGTAGGCCGCCCAAGAAGAGCGATAACTCCAAGTACTATGAGATTCTTGGAGTCTCCAAGACTGCCGCGCCGGAAGATTTGAAGAAGGCTTACAAGAAAGCCGCCATCAAGAACCATCCTGATAAGGGCGGAGATCCTGAAAAATTTAAAGAGTTGGCTCAGGCTTATGAGGTTCTTAGTGACCCGGAAAAGCGGGAAATTTATGATCAGTACGGTGAGGATGGACTCAAGGAAGGAATGGGAGGACCGGGTGGCCATGACCCATTTGACATCTTCTCCTCTTTCTTTGGTGGTGGCGGCAGCCCATTTGGAGCAGGTGCTAGCAGAGGACGGAGACAGAGACGTGGAGAAGATGTGGTTCACTCGTTGAAGGTCTCCTTGGAAGACTTATATCTTGGAACCTCAAAGAAACTTTCCCTATCTCGCAATGTGTTGTGCTCCAAGTGCAAAGGCAAGGGGTCAAAATCTGGAGCATCGACCAAGTGTGGTGGTTGTCAAGGAACTGGTATGAAGGTGACTATTAGGCATCTTGGACCGTCTATGATTCAACAGATGCAGCATGCTTGCAATGAATGTAAGGGTACTGGAGAGACCATCAGTGACAAGGACCGCTGTGGACAGTGCAAGGGAGAGAAGGTTGTGCAAGAAAAGAAAGTTTTGGAAGTCCACGTTGAGAAGGGTATGCAGAATGGACAAAAGATCACTTTTCCTGGTGAAGCTGATGAAGCTCCTGACACAGTCACTGGTGATATAGTGTTCATCATTCAGCAAAAGGAACATCCCAAATTCAAGAGAAAGATGGATGATCTTTTTGTGGAGCACTCTTTGTCACTCACAGATGCTCTATGTGGTTTCCAGTTTGTGCTGAACCATTTGGATGGCAGGCAGCTACTTATCAAATCAAACCCTGGTGAAGTTGTGAAGCCTGATTCGTTTAAGGCCATCAACGACGAGGGTATGCCAATGTACCAGAGACCATTCATGAAGGGCAAGCTGTACATCCATTTCTCAGTGGACTTTCCTGAAACTCTGAGCCTCGAGCAGGCCAAGGCTTTGGAAGCTGTTCTTCCCTCAAGGGCATCATCTCAGGAGCTGACAGATATGGAGTTGGATGAGTGTGAGGAGACGACTCTGCATGATGTGAACATGGAGGAGGAGATGAGGAGGAAACAGCACCAGGCTCGTTCAGAGGCATATGATGAGGAGGACGACGACATGCCTGGTGGTGCGCAGAGGGTGCAATGTGCACAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

422

Amino Acids

46.64

Weight (kDa)

6.01

Isoelectric Point (pI)

37.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 15 - 73 3.8e-22 DnaJ domain
DnaJ_C PF01556 124 - 345 7e-36 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 150 - 216 6.3e-14 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000572)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44110 AT3G44110 AT5G22060
fragaria_vesca FvH4_3g26170 FvH4_3g26170 FvH4_3g26170 FvH4_3g26220 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270
malus_domestica MD02G1258400.v1.1 MD03G1159100.v1.1 MD07G1062300.v1.1 MD11G1174700.v1.1
prunus_persica Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.6G146900_v2.0.a1 Prupe.6G146900_v2.0.a1
pyrus_communis pycom02g21960 pycom03g11140 pycom07g04780 pycom11g14940
rosa_chinensis RchiOBHm_Chr1g0332041 RchiOBHm_Chr1g0364381 RchiOBHm_Chr4g0428981 RchiOBHm_Chr5g0049001 RchiOBHm_Chr5g0049021
rosa_laevigata RLG00000007108 RLG00000013380 RLG00000027486 RLG00000029697 RLG00000034581 RLG00000034584
rosa_multiflora Rmu_co8449175.1_g000001 Rmu_sc0000441.1_g000032 Rmu_sc0000530.1_g000003 Rmu_sc0003358.1_g000010 Rmu_sc0004058.1_g000007 Rmu_sc0004522.1_g000007 Rmu_sc0008629.1_g000009 Rmu_sc0009489.1_g000007 Rmu_sc0014815.1_g000013
rosa_roxburghii Rroxscaffold_1G00032850 Rroxscaffold_1G00032870 Rroxscaffold_4G00292340 Rroxscaffold_4G00318430 Rroxscaffold_5G00370640
rosa_rugosa Rorug01G0097800 Rorug01G0097900 Rorug01G0098000 Rorug01G0315800 Rorug04G0231300 Rorug05G0241800 Rorug05G0241900 Rorug05G0242000 Rorug05G0242100.1 Rorug05G0242200 Rorug05G0242300 Rorug06G0102700 Rorug06G0102800
rosa_samantha Rh1AG121800 Rh1BG093200 Rh1CG303100 Rh1DG127500 Rh4BG293700 Rh4DG290600 Rh5AG322000 Rh5CG357500 Rh5CG357600 Rh5DG344100 Rh6BG218000
rosa_wichuraiana Rw0G008830 Rw1G009930 Rw1G028700 Rw5G030390 Rw5G030400 Rw6G018630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 317
Acc16I TGCGCA 1 cut(s) 1242
Acc36I ACCTGC 1 cut(s) 317
AccII CGCG 1 cut(s) 80
AciI CCGC 7 cut(s) 20, 78, 114, 141, 205, 309, 622
AclWI GGATC 1 cut(s) 140
AcoI YGGCCR 1 cut(s) 265
AcsI RAATTY 3 cut(s) 155, 210, 797
AfaI GTAC 5 cut(s) 47, 224, 595, 980, 1010
AfiI CCNNNNNNNGG 2 cut(s) 137, 1054
AgsI TTSAA 4 cut(s) 94, 382, 560, 802
AjiI CACGTC 1 cut(s) 356
AjnI CCWGG 4 cut(s) 721, 919, 1188, 1231
AjuI GAANNNNNNNTTGG 2 cut(s) 374, 406
AleI CACNNNNGTG 1 cut(s) 1264
AluBI AGCT 6 cut(s) 731, 740, 901, 1006, 1073, 1105
AluI AGCT 6 cut(s) 731, 740, 901, 1006, 1073, 1105
Alw21I GWGCWC 3 cut(s) 452, 834, 1261
Alw26I GTCTC 7 cut(s) 70, 340, 346, 391, 596, 979, 1130
Alw44I GTGCAC 1 cut(s) 1257
AlwI GGATC 1 cut(s) 140
AlwNI CAGNNNCTG 2 cut(s) 755, 1105
Ama87I CYCGRG 1 cut(s) 1049
AoxI GGCC 4 cut(s) 17, 265, 951, 1056
ApaLI GTGCAC 1 cut(s) 1257
ApeKI GCWGC 3 cut(s) 312, 568, 898
ApoI RAATTY 3 cut(s) 155, 210, 797
Asp700I GAANNNNTTC 1 cut(s) 1074
AspLEI GCGC 2 cut(s) 82, 1243
AspS9I GGNCC 3 cut(s) 257, 545, 619
AsuC2I CCSGG 2 cut(s) 197, 261
AsuHPI GGTGA 5 cut(s) 239, 538, 737, 770, 935
AsuNHI GCTAGC 1 cut(s) 332
AvaI CYCGRG 1 cut(s) 1049
AvaII GGWCC 3 cut(s) 257, 545, 619
BaeGI GKGCMC 1 cut(s) 1261
BalI TGGCCA 1 cut(s) 267
BarI GAAGNNNNNNTAC 2 cut(s) 86, 118
BbsI GAAGAC 1 cut(s) 402
Bbv12I GWGCWC 3 cut(s) 452, 834, 1261
BbvI GCAGC 3 cut(s) 324, 580, 910
BccI CCATC 7 cut(s) 125, 135, 227, 614, 805, 884, 962
BcgI CGANNNNNNTGC 2 cut(s) 1175, 1209
BciT130I CCWGG 4 cut(s) 723, 921, 1190, 1233
BclI TGATCA 1 cut(s) 217
BcnI CCSGG 2 cut(s) 197, 261
BcoDI GTCTC 7 cut(s) 70, 340, 346, 391, 596, 979, 1130
BfaI CTAG 1 cut(s) 333
BfuAI ACCTGC 1 cut(s) 317
BisI GCNGC 7 cut(s) 20, 78, 114, 310, 313, 569, 899
BlsI GCNGC 7 cut(s) 21, 79, 115, 311, 314, 570, 900
BmcAI AGTACT 1 cut(s) 47
Bme1390I CCNGG 6 cut(s) 197, 261, 723, 921, 1190, 1233
Bme18I GGWCC 3 cut(s) 257, 545, 619
BmeT110I CYCGRG 1 cut(s) 1049
BmgBI CACGTC 1 cut(s) 356
BmgT120I GGNCC 3 cut(s) 257, 545, 619
BmiI GGNNCC 1 cut(s) 412
BmrFI CCNGG 6 cut(s) 197, 261, 723, 921, 1190, 1233
BmsI GCATC 5 cut(s) 494, 547, 555, 841, 1100
BmtI GCTAGC 1 cut(s) 336
BpiI GAAGAC 1 cut(s) 402
BpmI CTGGAG 2 cut(s) 501, 618
Bpu10I CCTNAGC 1 cut(s) 171
BpuEI CTTGAG 2 cut(s) 224, 1069
BpuMI CCSGG 2 cut(s) 197, 261
BsaI GGTCTC 3 cut(s) 391, 596, 979
BsaJI CCNNGG 3 cut(s) 390, 919, 1059
BsaXI ACNNNNNCTCC 6 cut(s) 272, 302, 351, 381, 633, 663
Bsc4I CCNNNNNNNGG 2 cut(s) 137, 1054
Bse1I ACTGG 4 cut(s) 520, 601, 760, 868
Bse3DI GCAATG 3 cut(s) 445, 586, 1259
BseBI CCWGG 4 cut(s) 723, 921, 1190, 1233
BseDI CCNNGG 3 cut(s) 390, 919, 1059
BseGI GGATG 7 cut(s) 127, 238, 790, 820, 895, 1011, 1129
BseLI CCNNNNNNNGG 2 cut(s) 137, 1054
BseMI GCAATG 3 cut(s) 445, 586, 1259
BseMII CTCAG 4 cut(s) 185, 1034, 1035, 1112
BseNI ACTGG 4 cut(s) 520, 601, 760, 868
BseRI GAGGAG 7 cut(s) 24, 280, 1148, 1178, 1181, 1189, 1229
BseSI GKGCMC 1 cut(s) 1261
BseXI GCAGC 3 cut(s) 324, 580, 910
Bsh1236I CGCG 1 cut(s) 80
BshFI GGCC 4 cut(s) 19, 267, 953, 1058
BsiHKAI GWGCWC 3 cut(s) 452, 834, 1261
BsiHKCI CYCGRG 1 cut(s) 1049
BsiSI CCGG 3 cut(s) 83, 197, 260
BslI CCNNNNNNNGG 2 cut(s) 137, 1054
BsmAI GTCTC 7 cut(s) 70, 340, 346, 391, 596, 979, 1130
BsmBI CGTCTC 2 cut(s) 346, 1130
BsnI GGCC 4 cut(s) 19, 267, 953, 1058
Bso31I GGTCTC 3 cut(s) 391, 596, 979
BsoBI CYCGRG 1 cut(s) 1049
Bsp1286I GDGCHC 3 cut(s) 452, 834, 1261
Bsp1407I TGTACA 1 cut(s) 1008
Bsp143I GATC 4 cut(s) 145, 217, 711, 817
BspACI CCGC 7 cut(s) 20, 78, 114, 141, 205, 309, 622
BspANI GGCC 4 cut(s) 19, 267, 953, 1058
BspCNI CTCAG 4 cut(s) 184, 1034, 1035, 1111
BspFNI CGCG 1 cut(s) 80
BspHI TCATGA 1 cut(s) 993
BspLI GGNNCC 1 cut(s) 412
BspMI ACCTGC 1 cut(s) 317
BspOI GCTAGC 1 cut(s) 336
BspPI GGATC 1 cut(s) 140
BspQI GCTCTTC 1 cut(s) 23
BspTNI GGTCTC 3 cut(s) 391, 596, 979
BsrDI GCAATG 3 cut(s) 445, 586, 1259
BsrGI TGTACA 1 cut(s) 1008
BsrI ACTGG 4 cut(s) 520, 601, 760, 868
BssECI CCNNGG 3 cut(s) 390, 919, 1059
BssMI GATC 4 cut(s) 145, 217, 711, 817
BssT1I CCWWGG 2 cut(s) 390, 1059
Bst2UI CCWGG 4 cut(s) 723, 921, 1190, 1233
Bst4CI ACNGT 4 cut(s) 227, 549, 633, 751
Bst6I CTCTTC 1 cut(s) 23
BstAPI GCANNNNNTGC 1 cut(s) 1249
BstAUI TGTACA 1 cut(s) 1008
BstC8I GCNNGC 6 cut(s) 334, 573, 577, 896, 1004, 1056
BstDEI CTNAG 5 cut(s) 171, 188, 1021, 1043, 1098
BstENI CCTNNNNNAGG 1 cut(s) 1052
BstF5I GGATG 7 cut(s) 127, 238, 790, 820, 895, 1011, 1129
BstFNI CGCG 1 cut(s) 80
BstHHI GCGC 2 cut(s) 82, 1243
BstKTI GATC 4 cut(s) 148, 220, 714, 820
BstMAI GTCTC 7 cut(s) 70, 340, 346, 391, 596, 979, 1130
BstMBI GATC 4 cut(s) 145, 217, 711, 817
BstMWI GCNNNNNNNGC 4 cut(s) 456, 737, 1070, 1249
BstNI CCWGG 4 cut(s) 723, 921, 1190, 1233
BstNSI RCATGY 2 cut(s) 575, 1231
BstSCI CCNGG 6 cut(s) 195, 259, 721, 919, 1188, 1231
BstSLI GKGCMC 1 cut(s) 1261
BstUI CGCG 1 cut(s) 80
BstV1I GCAGC 3 cut(s) 324, 580, 910
BstV2I GAAGAC 1 cut(s) 402
BstX2I RGATCY 1 cut(s) 145
BstXI CCANNNNNNTGG 2 cut(s) 890, 1066
BstYI RGATCY 1 cut(s) 145
BsuRI GGCC 4 cut(s) 19, 267, 953, 1058
BtrI CACGTC 1 cut(s) 356
BtsCI GGATG 7 cut(s) 127, 238, 790, 820, 895, 1011, 1129
BtsIMutI CAGTG 4 cut(s) 616, 638, 753, 1029
BveI ACCTGC 1 cut(s) 317
Cac8I GCNNGC 6 cut(s) 334, 573, 577, 896, 1004, 1056
CaiI CAGNNNCTG 2 cut(s) 755, 1105
CciI TCATGA 1 cut(s) 993
CfoI GCGC 2 cut(s) 82, 1243
Cfr13I GGNCC 3 cut(s) 257, 545, 619
Csp6I GTAC 5 cut(s) 46, 223, 594, 979, 1009
CspCI CAANNNNNGTGG 2 cut(s) 481, 516
CviAII CATG 6 cut(s) 269, 572, 994, 1148, 1159, 1228
CviQI GTAC 5 cut(s) 46, 223, 594, 979, 1009
DdeI CTNAG 5 cut(s) 171, 188, 1021, 1043, 1098
DpnI GATC 4 cut(s) 147, 219, 713, 819
DpnII GATC 4 cut(s) 145, 217, 711, 817
DraI TTTAAA 1 cut(s) 160
EaeI YGGCCR 1 cut(s) 265
Eam1104I CTCTTC 1 cut(s) 23
EarI CTCTTC 1 cut(s) 23
EciI GGCGGA 1 cut(s) 156
Eco130I CCWWGG 2 cut(s) 390, 1059
Eco31I GGTCTC 3 cut(s) 391, 596, 979
Eco47I GGWCC 3 cut(s) 257, 545, 619
Eco88I CYCGRG 1 cut(s) 1049
EcoNI CCTNNNNNAGG 1 cut(s) 1052
EcoRII CCWGG 4 cut(s) 721, 919, 1188, 1231
EcoT14I CCWWGG 2 cut(s) 390, 1059
ErhI CCWWGG 2 cut(s) 390, 1059
Esp3I CGTCTC 2 cut(s) 346, 1130
FaeI CATG 6 cut(s) 272, 575, 997, 1151, 1162, 1231
FalI AAGNNNNNCTT 4 cut(s) 374, 406, 1062, 1094
FatI CATG 6 cut(s) 268, 571, 993, 1147, 1158, 1227
FauI CCCGC 1 cut(s) 198
FauNDI CATATG 1 cut(s) 1207
FbaI TGATCA 1 cut(s) 217
Fnu4HI GCNGC 7 cut(s) 20, 78, 114, 310, 313, 569, 899
FokI GGATG 7 cut(s) 114, 245, 777, 827, 902, 998, 1136
Fsp4HI GCNGC 7 cut(s) 20, 78, 114, 310, 313, 569, 899
FspBI CTAG 1 cut(s) 333
FspI TGCGCA 1 cut(s) 1242
GlaI GCGC 2 cut(s) 81, 1242
GluI GCNGC 7 cut(s) 20, 78, 114, 310, 313, 569, 899
GsuI CTGGAG 2 cut(s) 501, 618
HaeIII GGCC 4 cut(s) 19, 267, 953, 1058
HapII CCGG 3 cut(s) 83, 197, 260
HhaI GCGC 2 cut(s) 82, 1243
Hin1II CATG 6 cut(s) 272, 575, 997, 1151, 1162, 1231
Hin6I GCGC 2 cut(s) 80, 1241
HinP1I GCGC 2 cut(s) 80, 1241
HinfI GANTC 6 cut(s) 55, 63, 237, 556, 941, 1141
HpaII CCGG 3 cut(s) 83, 197, 260
HphI GGTGA 5 cut(s) 239, 538, 737, 770, 935
Hpy166II GTNNAC 6 cut(s) 373, 629, 679, 1027, 1156, 1259
Hpy188I TCNGA 3 cut(s) 8, 1044, 1201
Hpy188III TCNNGA 9 cut(s) 121, 131, 149, 480, 743, 802, 994, 1034, 1100
Hpy8I GTNNAC 6 cut(s) 373, 629, 679, 1027, 1156, 1259
Hpy99I CGWCG 2 cut(s) 965, 1226
HpyAV CCTTC 7 cut(s) 91, 239, 376, 517, 640, 682, 991
HpyCH4III ACNGT 4 cut(s) 227, 549, 633, 751
HpyCH4IV ACGT 2 cut(s) 355, 681
HpyCH4V TGCA 9 cut(s) 459, 568, 579, 636, 655, 697, 1147, 1252, 1259
HpyF10VI GCNNNNNNNGC 4 cut(s) 456, 737, 1070, 1249
HpyF3I CTNAG 5 cut(s) 171, 188, 1021, 1043, 1098
HpySE526I ACGT 2 cut(s) 355, 681
Hsp92II CATG 6 cut(s) 272, 575, 997, 1151, 1162, 1231
HspAI GCGC 2 cut(s) 80, 1241
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 4 cut(s) 145, 217, 711, 817
LguI GCTCTTC 1 cut(s) 23
LmnI GCTCC 6 cut(s) 323, 455, 482, 745, 829, 1102
Lsp1109I GCAGC 3 cut(s) 324, 580, 910
LweI GCATC 5 cut(s) 494, 547, 555, 841, 1100
MaeI CTAG 1 cut(s) 333
MaeII ACGT 2 cut(s) 355, 681
MaeIII GTNAC 5 cut(s) 191, 526, 611, 751, 840
MalI GATC 4 cut(s) 147, 219, 713, 819
MboI GATC 4 cut(s) 145, 217, 711, 817
MboII GAAGA 7 cut(s) 40, 98, 106, 277, 374, 407, 1070
MflI RGATCY 1 cut(s) 145
MhlI GDGCHC 3 cut(s) 452, 834, 1261
MlsI TGGCCA 1 cut(s) 267
MluCI AATT 3 cut(s) 155, 210, 797
MluNI TGGCCA 1 cut(s) 267
MlyI GAGTC 3 cut(s) 72, 231, 1135
MmeI TCCRAC 1 cut(s) 1101
Mox20I TGGCCA 1 cut(s) 267
MroXI GAANNNNTTC 1 cut(s) 1074
MscI TGGCCA 1 cut(s) 267
MseI TTAA 2 cut(s) 159, 948
MslI CAYNNNNRTG 2 cut(s) 888, 1264
Msp20I TGGCCA 1 cut(s) 267
MspA1I CMGCKG 1 cut(s) 624
MspI CCGG 3 cut(s) 83, 197, 260
MspR9I CCNGG 6 cut(s) 197, 261, 723, 921, 1190, 1233
MvaI CCWGG 4 cut(s) 723, 921, 1190, 1233
MvnI CGCG 1 cut(s) 80
MwoI GCNNNNNNNGC 4 cut(s) 456, 737, 1070, 1249
NciI CCSGG 2 cut(s) 197, 261
NdeI CATATG 1 cut(s) 1207
NdeII GATC 4 cut(s) 145, 217, 711, 817
NheI GCTAGC 1 cut(s) 332
NlaIII CATG 6 cut(s) 272, 575, 997, 1151, 1162, 1231
NlaIV GGNNCC 1 cut(s) 412
NmuCI GTSAC 5 cut(s) 191, 526, 611, 751, 840
NsbI TGCGCA 1 cut(s) 1242
NspI RCATGY 2 cut(s) 575, 1231
OliI CACNNNNGTG 1 cut(s) 1264
PaeI GCATGC 1 cut(s) 575
PaeR7I CTCGAG 1 cut(s) 1049
PagI TCATGA 1 cut(s) 993
PaqCI CACCTGC 1 cut(s) 317
PciSI GCTCTTC 1 cut(s) 23
PdmI GAANNNNTTC 1 cut(s) 1074
PfeI GAWTC 3 cut(s) 55, 556, 941
PflFI GACNNNGTC 1 cut(s) 749
PkrI GCNGC 7 cut(s) 21, 79, 115, 311, 314, 570, 900
PleI GAGTC 3 cut(s) 71, 231, 1135
PpsI GAGTC 3 cut(s) 71, 231, 1135
Psp6I CCWGG 4 cut(s) 721, 919, 1188, 1231
PspGI CCWGG 4 cut(s) 721, 919, 1188, 1231
PspN4I GGNNCC 1 cut(s) 412
PspPI GGNCC 3 cut(s) 257, 545, 619
PspXI VCTCGAGB 1 cut(s) 1049
PstNI CAGNNNCTG 2 cut(s) 755, 1105
PsuI RGATCY 1 cut(s) 145
PsyI GACNNNGTC 1 cut(s) 749
RsaI GTAC 5 cut(s) 47, 224, 595, 980, 1010
RsaNI GTAC 5 cut(s) 46, 223, 594, 979, 1009
RseI CAYNNNNRTG 2 cut(s) 888, 1264
SapI GCTCTTC 1 cut(s) 23
SaqAI TTAA 2 cut(s) 159, 948
SatI GCNGC 7 cut(s) 20, 78, 114, 310, 313, 569, 899
Sau3AI GATC 4 cut(s) 145, 217, 711, 817
Sau96I GGNCC 3 cut(s) 257, 545, 619
ScaI AGTACT 1 cut(s) 47
SchI GAGTC 3 cut(s) 72, 231, 1135
ScrFI CCNGG 6 cut(s) 197, 261, 723, 921, 1190, 1233
SduI GDGCHC 3 cut(s) 452, 834, 1261
SfaNI GCATC 5 cut(s) 494, 547, 555, 841, 1100
Sfr274I CTCGAG 1 cut(s) 1049
SinI GGWCC 3 cut(s) 257, 545, 619
SlaI CTCGAG 1 cut(s) 1049
SmiMI CAYNNNNRTG 2 cut(s) 888, 1264
SmlI CTYRAG 3 cut(s) 239, 1049, 1084
SmoI CTYRAG 3 cut(s) 239, 1049, 1084
SphI GCATGC 1 cut(s) 575
Sse9I AATT 3 cut(s) 155, 210, 797
SsiI CCGC 7 cut(s) 20, 78, 114, 141, 205, 309, 622
SspMI CTAG 1 cut(s) 333
StyD4I CCNGG 6 cut(s) 195, 259, 721, 919, 1188, 1231
StyI CCWWGG 2 cut(s) 390, 1059
TaaI ACNGT 4 cut(s) 227, 549, 633, 751
TaiI ACGT 2 cut(s) 358, 684
TaqI TCGA 2 cut(s) 488, 1050
TasI AATT 3 cut(s) 155, 210, 797
TatI WGTACW 2 cut(s) 45, 1008
TauI GCSGC 4 cut(s) 22, 80, 116, 312
TfiI GAWTC 3 cut(s) 55, 556, 941
Tru1I TTAA 2 cut(s) 159, 948
Tru9I TTAA 2 cut(s) 159, 948
TscAI CASTG 4 cut(s) 616, 638, 760, 1029
TseFI GTSAC 5 cut(s) 191, 526, 611, 751, 840
TseI GCWGC 3 cut(s) 312, 568, 898
Tsp45I GTSAC 5 cut(s) 191, 526, 611, 751, 840
TspDTI ATGAA 6 cut(s) 536, 597, 750, 760, 982, 1010
TspGWI ACGGA 1 cut(s) 358
TspRI CASTG 4 cut(s) 616, 638, 760, 1029
Tth111I GACNNNGTC 1 cut(s) 749
VneI GTGCAC 1 cut(s) 1257
VpaK11BI GGWCC 3 cut(s) 257, 545, 619
XagI CCTNNNNNAGG 1 cut(s) 1052
XapI RAATTY 3 cut(s) 155, 210, 797
XceI RCATGY 2 cut(s) 575, 1231
XhoI CTCGAG 1 cut(s) 1049
XmnI GAANNNNTTC 1 cut(s) 1074
XspI CTAG 1 cut(s) 333
ZrmI AGTACT 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.