MD11G1174700.v1.1

DnaJ protein homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000572
Physical Location & Seq
Forward (+)
20483626 .. 20486246
2621 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1174700.v1.1.491

Sequence Viewer

Length: 1263 bp
ATGTTTGGGAGGGCGCCGAAGAAGAGCGATAACACTCGGTACTATGAGATTCTGGGAGTCTCGAAGAGTGCTTCTCCCGACGATTTGAAGAAGGCGTACAAGAAGGCCGCCATAAAAAACCACCCTGACAAGGGTGGAGATCCTGAGAAATTTAAAGAGTTGGCTCAGGCTTATGAGGTTTTGAGTGACCCTGAGAAGCGTGAAATCTATGATCAGTATGGTGAGGATGCACTCAAGGAGGGAATGGGTGGCGGCGGCGGTGGAGGCCACGACCCGTTTGACATCTTCTCATCCTTCTTTGGGGGAAGCCCTTTTGGAGGTGGTGGTAGTAGCCGAGGACGAAGACAGAGACGTGGAGAAGATGTTGTCCACGCACTGAAGGTTTCATTGGAGGACCTCTATCTTGGGACCTCGAAGAAACTATCTTTGTCGCGAAATGTGTTATGCTCCAAGTGTAATGGGAAGGGATCAAAATCTGGGGCTTCATTGAAGTGTTCTGGCTGTCAAGGAAGTGGTATGAAGGTCTCAATCAGGCATCTTGGCCCGTCAATGATTCAACAGATGCAACATGCTTGCAATGAGTGTAAGGGTACTGGAGAGACCATTAGTGACAGAGACCGCTGCACTCAGTGCAAAGGGGAGAAGGTTGTTCAAGAGAAGAAGGTTCTGGAAGTCCATGTGGAGAAGGGTATGCAGAATGGCCAGAAGATCACATTCCCTGGTGAAGCAGATGAAGCTCCGGAGACAGTCACTGGTGATATAGTGTTTGTCATTCAGCAAAAAGAACATCCGAAGTTCAAGAGAAAGGGCGAGGACCTTTTCGTTGAGCACACACTGTCTCTTACTGAGGCTCTATGTGGCTTCCAGTTCGTGCTGACCCATTTAGATGGCAGGCAGCTGCTTATCAAATCAAACCCTGGCGAAGTTGTCAAGCCTGATTCGTTCAAGGCGATCAATGATGAGGGTATGCCCATGTACCAGAGGCCATTCATGAAGGGTAAGCTGTACATCCACTTCAATGTGGAATTCCCAGAGTCTCTGAGCCCTGAGCAGGTCAAGGCATTGGAAGCTGCTCTTCCAGGCAAGCCATCGGCATCTCAGCTCACTGATATGGAGGTGGATGAGTGTGAGGAGACGACTCTGCATGATGTGAACATGGAGGAGGAGATGAGGAGGAAGCAGCAGCAGGCTCAGCAAGAGGCCTATGATGAGGATGACGATATGCCTGGTGGTGCTCAGAGGGTGCAGTGCGCCCAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

421

Amino Acids

46.36

Weight (kDa)

5.96

Isoelectric Point (pI)

38.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 14 - 71 1.3e-22 DnaJ domain
DnaJ_C PF01556 123 - 344 1.5e-37 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 149 - 215 8.5e-15 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000572)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44110 AT3G44110 AT5G22060
fragaria_vesca FvH4_3g26170 FvH4_3g26170 FvH4_3g26170 FvH4_3g26220 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270
malus_domestica MD02G1258400.v1.1 MD03G1159100.v1.1 MD07G1062300.v1.1 MD11G1174700.v1.1
prunus_persica Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.6G146900_v2.0.a1 Prupe.6G146900_v2.0.a1
pyrus_communis pycom02g21960 pycom03g11140 pycom07g04780 pycom11g14940
rosa_chinensis RchiOBHm_Chr1g0332041 RchiOBHm_Chr1g0364381 RchiOBHm_Chr4g0428981 RchiOBHm_Chr5g0049001 RchiOBHm_Chr5g0049021
rosa_laevigata RLG00000007108 RLG00000013380 RLG00000027486 RLG00000029697 RLG00000034581 RLG00000034584
rosa_multiflora Rmu_co8449175.1_g000001 Rmu_sc0000441.1_g000032 Rmu_sc0000530.1_g000003 Rmu_sc0003358.1_g000010 Rmu_sc0004058.1_g000007 Rmu_sc0004522.1_g000007 Rmu_sc0008629.1_g000009 Rmu_sc0009489.1_g000007 Rmu_sc0014815.1_g000013
rosa_roxburghii Rroxscaffold_1G00032850 Rroxscaffold_1G00032870 Rroxscaffold_4G00292340 Rroxscaffold_4G00318430 Rroxscaffold_5G00370640
rosa_rugosa Rorug01G0097800 Rorug01G0097900 Rorug01G0098000 Rorug01G0315800 Rorug04G0231300 Rorug05G0241800 Rorug05G0241900 Rorug05G0242000 Rorug05G0242100.1 Rorug05G0242200 Rorug05G0242300 Rorug06G0102700 Rorug06G0102800
rosa_samantha Rh1AG121800 Rh1BG093200 Rh1CG303100 Rh1DG127500 Rh4BG293700 Rh4DG290600 Rh5AG322000 Rh5CG357500 Rh5CG357600 Rh5DG344100 Rh6BG218000
rosa_wichuraiana Rw0G008830 Rw1G009930 Rw1G028700 Rw5G030390 Rw5G030400 Rw6G018630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1042
AccB1I GGYRCC 1 cut(s) 13
AccII CGCG 1 cut(s) 433
AccIII TCCGGA 1 cut(s) 739
AciI CCGC 5 cut(s) 108, 252, 255, 258, 619
AclWI GGATC 2 cut(s) 134, 475
AcoI YGGCCR 1 cut(s) 700
AcsI RAATTY 2 cut(s) 149, 1025
AcuI CTGAAG 1 cut(s) 398
AcyI GRCGYC 1 cut(s) 14
AdeI CACNNNGTG 1 cut(s) 630
AfaI GTAC 5 cut(s) 41, 98, 592, 977, 1007
AfiI CCNNNNNNNGG 5 cut(s) 130, 131, 300, 317, 1051
AgsI TTSAA 7 cut(s) 88, 490, 557, 653, 799, 946, 1018
AjiI CACGTC 1 cut(s) 353
AjnI CCWGG 4 cut(s) 718, 916, 1078, 1225
AjuI GAANNNNNNNTTGG 2 cut(s) 371, 403
AluBI AGCT 5 cut(s) 737, 898, 1003, 1070, 1102
AluI AGCT 5 cut(s) 737, 898, 1003, 1070, 1102
Alw21I GWGCWC 2 cut(s) 831, 1237
Alw26I GTCTC 9 cut(s) 64, 343, 529, 593, 609, 737, 843, 1041, 1127
AlwI GGATC 2 cut(s) 134, 475
AlwNI CAGNNNCTG 1 cut(s) 752
Aor13HI TCCGGA 1 cut(s) 739
AoxI GGCC 6 cut(s) 105, 265, 541, 700, 983, 1200
ApeKI GCWGC 6 cut(s) 621, 895, 898, 1070, 1180, 1183
ApoI RAATTY 2 cut(s) 149, 1025
AspLEI GCGC 2 cut(s) 16, 1253
AspS9I GGNCC 4 cut(s) 394, 408, 542, 814
AsuHPI GGTGA 3 cut(s) 233, 734, 767
AvaII GGWCC 3 cut(s) 394, 408, 814
BalI TGGCCA 1 cut(s) 702
BanI GGYRCC 1 cut(s) 13
BanII GRGCYC 1 cut(s) 1046
BarI GAAGNNNNNNTAC 4 cut(s) 80, 112, 998, 1030
BbsI GAAGAC 1 cut(s) 349
Bbv12I GWGCWC 2 cut(s) 831, 1237
BbvI GCAGC 6 cut(s) 608, 885, 907, 1057, 1192, 1195
BccI CCATC 2 cut(s) 881, 1096
BciT130I CCWGG 4 cut(s) 720, 918, 1080, 1227
BclI TGATCA 1 cut(s) 211
BcoDI GTCTC 9 cut(s) 64, 343, 529, 593, 609, 737, 843, 1041, 1127
BfoI RGCGCY 1 cut(s) 17
BfuAI ACCTGC 1 cut(s) 1042
BisI GCNGC 9 cut(s) 108, 253, 256, 622, 896, 899, 1071, 1181, 1184
BlpI GCTNAGC 1 cut(s) 1191
BlsI GCNGC 9 cut(s) 109, 254, 257, 623, 897, 900, 1072, 1182, 1185
Bme1390I CCNGG 4 cut(s) 720, 918, 1080, 1227
Bme18I GGWCC 3 cut(s) 394, 408, 814
BmgBI CACGTC 1 cut(s) 353
BmgT120I GGNCC 4 cut(s) 394, 408, 542, 814
BmiI GGNNCC 2 cut(s) 15, 409
BmrFI CCNGG 4 cut(s) 720, 918, 1080, 1227
BmsI GCATC 4 cut(s) 217, 544, 552, 1103
BpiI GAAGAC 1 cut(s) 349
BplI GAGNNNNNCTC 2 cut(s) 58, 90
BpmI CTGGAG 1 cut(s) 615
Bpu10I CCTNAGC 2 cut(s) 165, 1047
Bpu1102I GCTNAGC 1 cut(s) 1191
BpuEI CTTGAG 1 cut(s) 218
BsaBI GATNNNNATC 1 cut(s) 472
BsaHI GRCGYC 1 cut(s) 14
BsaI GGTCTC 3 cut(s) 529, 593, 609
BsaJI CCNNGG 3 cut(s) 334, 718, 916
BsaWI WCCGGW 1 cut(s) 739
BsaXI ACNNNNNCTCC 2 cut(s) 348, 378
Bsc4I CCNNNNNNNGG 5 cut(s) 130, 131, 300, 317, 1051
Bse1I ACTGG 3 cut(s) 598, 757, 865
Bse3DI GCAATG 1 cut(s) 583
Bse8I GATNNNNATC 1 cut(s) 472
BseAI TCCGGA 1 cut(s) 739
BseBI CCWGG 4 cut(s) 720, 918, 1080, 1227
BseDI CCNNGG 3 cut(s) 334, 718, 916
BseGI GGATG 6 cut(s) 232, 290, 787, 1008, 1126, 1219
BseJI GATNNNNATC 1 cut(s) 472
BseLI CCNNNNNNNGG 5 cut(s) 130, 131, 300, 317, 1051
BseMI GCAATG 1 cut(s) 583
BseNI ACTGG 3 cut(s) 598, 757, 865
BseRI GAGGAG 4 cut(s) 1145, 1175, 1178, 1186
BseXI GCAGC 6 cut(s) 608, 885, 907, 1057, 1192, 1195
BseYI CCCAGC 1 cut(s) 1254
BsgI GTGCAG 1 cut(s) 607
Bsh1236I CGCG 1 cut(s) 433
BshFI GGCC 6 cut(s) 107, 267, 543, 702, 985, 1202
BshNI GGYRCC 1 cut(s) 13
BsiHKAI GWGCWC 2 cut(s) 831, 1237
BsiSI CCGG 1 cut(s) 740
BslFI GGGAC 1 cut(s) 421
BslI CCNNNNNNNGG 5 cut(s) 130, 131, 300, 317, 1051
BsmAI GTCTC 9 cut(s) 64, 343, 529, 593, 609, 737, 843, 1041, 1127
BsmBI CGTCTC 2 cut(s) 343, 1127
BsmFI GGGAC 1 cut(s) 421
BsnI GGCC 6 cut(s) 107, 267, 543, 702, 985, 1202
Bso31I GGTCTC 3 cut(s) 529, 593, 609
Bsp1286I GDGCHC 3 cut(s) 831, 1046, 1237
Bsp13I TCCGGA 1 cut(s) 739
Bsp1407I TGTACA 1 cut(s) 1005
Bsp143I GATC 5 cut(s) 139, 211, 467, 708, 951
Bsp1720I GCTNAGC 1 cut(s) 1191
Bsp68I TCGCGA 1 cut(s) 433
BspACI CCGC 5 cut(s) 108, 252, 255, 258, 619
BspANI GGCC 6 cut(s) 107, 267, 543, 702, 985, 1202
BspEI TCCGGA 1 cut(s) 739
BspFNI CGCG 1 cut(s) 433
BspHI TCATGA 1 cut(s) 990
BspLI GGNNCC 2 cut(s) 15, 409
BspMI ACCTGC 1 cut(s) 1042
BspPI GGATC 2 cut(s) 134, 475
BspQI GCTCTTC 2 cut(s) 17, 1080
BspT107I GGYRCC 1 cut(s) 13
BspTNI GGTCTC 3 cut(s) 529, 593, 609
BsrDI GCAATG 1 cut(s) 583
BsrGI TGTACA 1 cut(s) 1005
BsrI ACTGG 3 cut(s) 598, 757, 865
BssECI CCNNGG 3 cut(s) 334, 718, 916
BssMI GATC 5 cut(s) 139, 211, 467, 708, 951
BssNI GRCGYC 1 cut(s) 14
Bst2UI CCWGG 4 cut(s) 720, 918, 1080, 1227
Bst4CI ACNGT 2 cut(s) 748, 837
Bst6I CTCTTC 3 cut(s) 17, 59, 1080
BstACI GRCGYC 1 cut(s) 14
BstAPI GCANNNNNTGC 1 cut(s) 630
BstAUI TGTACA 1 cut(s) 1005
BstC8I GCNNGC 4 cut(s) 574, 893, 1085, 1188
BstENI CCTNNNNNAGG 1 cut(s) 315
BstF5I GGATG 6 cut(s) 232, 290, 787, 1008, 1126, 1219
BstFNI CGCG 1 cut(s) 433
BstH2I RGCGCY 1 cut(s) 17
BstHHI GCGC 2 cut(s) 16, 1253
BstKTI GATC 5 cut(s) 142, 214, 470, 711, 954
BstMAI GTCTC 9 cut(s) 64, 343, 529, 593, 609, 737, 843, 1041, 1127
BstMBI GATC 5 cut(s) 139, 211, 467, 708, 951
BstMWI GCNNNNNNNGC 5 cut(s) 264, 630, 734, 1067, 1192
BstNI CCWGG 4 cut(s) 720, 918, 1080, 1227
BstNSI RCATGY 1 cut(s) 572
BstSCI CCNGG 4 cut(s) 718, 916, 1078, 1225
BstUI CGCG 1 cut(s) 433
BstV1I GCAGC 6 cut(s) 608, 885, 907, 1057, 1192, 1195
BstV2I GAAGAC 1 cut(s) 349
BstX2I RGATCY 1 cut(s) 139
BstXI CCANNNNNNTGG 1 cut(s) 887
BstYI RGATCY 1 cut(s) 139
BsuRI GGCC 6 cut(s) 107, 267, 543, 702, 985, 1202
BtrI CACGTC 1 cut(s) 353
BtsCI GGATG 6 cut(s) 232, 290, 787, 1008, 1126, 1219
BtsI GCAGTG 1 cut(s) 1253
BtsIMutI CAGTG 6 cut(s) 374, 635, 750, 833, 1104, 1253
BtuMI TCGCGA 1 cut(s) 433
BveI ACCTGC 1 cut(s) 1042
Cac8I GCNNGC 4 cut(s) 574, 893, 1085, 1188
CaiI CAGNNNCTG 1 cut(s) 752
CciI TCATGA 1 cut(s) 990
CfoI GCGC 2 cut(s) 16, 1253
Cfr13I GGNCC 4 cut(s) 394, 408, 542, 814
Csp6I GTAC 5 cut(s) 40, 97, 591, 976, 1006
CviAII CATG 6 cut(s) 569, 677, 973, 991, 1145, 1156
CviQI GTAC 5 cut(s) 40, 97, 591, 976, 1006
DinI GGCGCC 1 cut(s) 15
DpnI GATC 5 cut(s) 141, 213, 469, 710, 953
DpnII GATC 5 cut(s) 139, 211, 467, 708, 951
DraI TTTAAA 1 cut(s) 154
DraIII CACNNNGTG 1 cut(s) 630
EaeI YGGCCR 1 cut(s) 700
Eam1104I CTCTTC 3 cut(s) 17, 59, 1080
EarI CTCTTC 3 cut(s) 17, 59, 1080
Eco147I AGGCCT 1 cut(s) 1202
Eco24I GRGCYC 1 cut(s) 1046
Eco31I GGTCTC 3 cut(s) 529, 593, 609
Eco47I GGWCC 3 cut(s) 394, 408, 814
Eco57I CTGAAG 1 cut(s) 398
EcoNI CCTNNNNNAGG 1 cut(s) 315
EcoO109I RGGNCCY 3 cut(s) 394, 408, 814
EcoRI GAATTC 1 cut(s) 1025
EcoRII CCWGG 4 cut(s) 718, 916, 1078, 1225
EcoT38I GRGCYC 1 cut(s) 1046
EgeI GGCGCC 1 cut(s) 15
EheI GGCGCC 1 cut(s) 15
Esp3I CGTCTC 2 cut(s) 343, 1127
FaeI CATG 6 cut(s) 572, 680, 976, 994, 1148, 1159
FalI AAGNNNNNCTT 2 cut(s) 1059, 1091
FaqI GGGAC 1 cut(s) 421
FatI CATG 6 cut(s) 568, 676, 972, 990, 1144, 1155
FbaI TGATCA 1 cut(s) 211
Fnu4HI GCNGC 9 cut(s) 108, 253, 256, 622, 896, 899, 1071, 1181, 1184
FokI GGATG 6 cut(s) 239, 277, 774, 995, 1133, 1226
FriOI GRGCYC 1 cut(s) 1046
Fsp4HI GCNGC 9 cut(s) 108, 253, 256, 622, 896, 899, 1071, 1181, 1184
GlaI GCGC 2 cut(s) 15, 1252
GluI GCNGC 9 cut(s) 108, 253, 256, 622, 896, 899, 1071, 1181, 1184
GsaI CCCAGC 1 cut(s) 1258
GsuI CTGGAG 1 cut(s) 615
HaeII RGCGCY 1 cut(s) 17
HaeIII GGCC 6 cut(s) 107, 267, 543, 702, 985, 1202
HapII CCGG 1 cut(s) 740
HhaI GCGC 2 cut(s) 16, 1253
Hin1I GRCGYC 1 cut(s) 14
Hin1II CATG 6 cut(s) 572, 680, 976, 994, 1148, 1159
Hin6I GCGC 2 cut(s) 14, 1251
HinP1I GCGC 2 cut(s) 14, 1251
HinfI GANTC 6 cut(s) 49, 57, 553, 938, 1034, 1138
HpaII CCGG 1 cut(s) 740
HphI GGTGA 3 cut(s) 233, 734, 767
Hpy166II GTNNAC 2 cut(s) 370, 1153
Hpy188I TCNGA 3 cut(s) 792, 1041, 1239
Hpy188III TCNNGA 9 cut(s) 61, 77, 143, 432, 653, 668, 740, 799, 991
Hpy8I GTNNAC 2 cut(s) 370, 1153
Hpy99I CGWCG 1 cut(s) 83
HpyCH4III ACNGT 2 cut(s) 748, 837
HpyCH4IV ACGT 1 cut(s) 352
HpyCH4V TGCA 8 cut(s) 230, 565, 576, 624, 633, 694, 1144, 1246
HpyF10VI GCNNNNNNNGC 5 cut(s) 264, 630, 734, 1067, 1192
HpySE526I ACGT 1 cut(s) 352
Hsp92I GRCGYC 1 cut(s) 14
Hsp92II CATG 6 cut(s) 572, 680, 976, 994, 1148, 1159
HspAI GCGC 2 cut(s) 14, 1251
KasI GGCGCC 1 cut(s) 13
Kpn2I TCCGGA 1 cut(s) 739
Ksp22I TGATCA 1 cut(s) 211
Kzo9I GATC 5 cut(s) 139, 211, 467, 708, 951
LguI GCTCTTC 2 cut(s) 17, 1080
LmnI GCTCC 2 cut(s) 452, 742
Lsp1109I GCAGC 6 cut(s) 608, 885, 907, 1057, 1192, 1195
LweI GCATC 4 cut(s) 217, 544, 552, 1103
MaeII ACGT 1 cut(s) 352
MaeIII GTNAC 3 cut(s) 185, 608, 748
MalI GATC 5 cut(s) 141, 213, 469, 710, 953
MboI GATC 5 cut(s) 139, 211, 467, 708, 951
MflI RGATCY 1 cut(s) 139
MhlI GDGCHC 3 cut(s) 831, 1046, 1237
MlsI TGGCCA 1 cut(s) 702
MluCI AATT 2 cut(s) 149, 1025
MluNI TGGCCA 1 cut(s) 702
Mly113I GGCGCC 1 cut(s) 14
MlyI GAGTC 3 cut(s) 66, 1043, 1132
Mox20I TGGCCA 1 cut(s) 702
MroI TCCGGA 1 cut(s) 739
MscI TGGCCA 1 cut(s) 702
MseI TTAA 1 cut(s) 153
MslI CAYNNNNRTG 4 cut(s) 490, 885, 1017, 1109
Msp20I TGGCCA 1 cut(s) 702
MspA1I CMGCKG 2 cut(s) 621, 898
MspI CCGG 1 cut(s) 740
MspR9I CCNGG 4 cut(s) 720, 918, 1080, 1227
MvaI CCWGG 4 cut(s) 720, 918, 1080, 1227
MvnI CGCG 1 cut(s) 433
MwoI GCNNNNNNNGC 5 cut(s) 264, 630, 734, 1067, 1192
NarI GGCGCC 1 cut(s) 14
NdeII GATC 5 cut(s) 139, 211, 467, 708, 951
NlaIII CATG 6 cut(s) 572, 680, 976, 994, 1148, 1159
NlaIV GGNNCC 2 cut(s) 15, 409
NmeAIII GCCGAG 1 cut(s) 359
NmuCI GTSAC 3 cut(s) 185, 608, 748
NruI TCGCGA 1 cut(s) 433
NspI RCATGY 1 cut(s) 572
PagI TCATGA 1 cut(s) 990
PceI AGGCCT 1 cut(s) 1202
PciSI GCTCTTC 2 cut(s) 17, 1080
PcsI WCGNNNNNNNCGW 1 cut(s) 947
PfeI GAWTC 3 cut(s) 49, 553, 938
PkrI GCNGC 9 cut(s) 109, 254, 257, 623, 897, 900, 1072, 1182, 1185
PleI GAGTC 3 cut(s) 65, 1042, 1132
PluTI GGCGCC 1 cut(s) 17
PpsI GAGTC 3 cut(s) 65, 1042, 1132
PpuMI RGGWCCY 3 cut(s) 394, 408, 814
Psp5II RGGWCCY 3 cut(s) 394, 408, 814
Psp6I CCWGG 4 cut(s) 718, 916, 1078, 1225
PspFI CCCAGC 1 cut(s) 1254
PspGI CCWGG 4 cut(s) 718, 916, 1078, 1225
PspN4I GGNNCC 2 cut(s) 15, 409
PspPI GGNCC 4 cut(s) 394, 408, 542, 814
PspPPI RGGWCCY 3 cut(s) 394, 408, 814
PstNI CAGNNNCTG 1 cut(s) 752
PsuI RGATCY 1 cut(s) 139
PvuII CAGCTG 1 cut(s) 898
RruI TCGCGA 1 cut(s) 433
RsaI GTAC 5 cut(s) 41, 98, 592, 977, 1007
RsaNI GTAC 5 cut(s) 40, 97, 591, 976, 1006
RseI CAYNNNNRTG 4 cut(s) 490, 885, 1017, 1109
SapI GCTCTTC 2 cut(s) 17, 1080
SaqAI TTAA 1 cut(s) 153
SatI GCNGC 9 cut(s) 108, 253, 256, 622, 896, 899, 1071, 1181, 1184
Sau3AI GATC 5 cut(s) 139, 211, 467, 708, 951
Sau96I GGNCC 4 cut(s) 394, 408, 542, 814
SchI GAGTC 3 cut(s) 66, 1043, 1132
ScrFI CCNGG 4 cut(s) 720, 918, 1080, 1227
SduI GDGCHC 3 cut(s) 831, 1046, 1237
SfaNI GCATC 4 cut(s) 217, 544, 552, 1103
SfoI GGCGCC 1 cut(s) 15
SinI GGWCC 3 cut(s) 394, 408, 814
SmiMI CAYNNNNRTG 4 cut(s) 490, 885, 1017, 1109
SmlI CTYRAG 1 cut(s) 233
SmoI CTYRAG 1 cut(s) 233
Sse9I AATT 2 cut(s) 149, 1025
SseBI AGGCCT 1 cut(s) 1202
SsiI CCGC 5 cut(s) 108, 252, 255, 258, 619
SspDI GGCGCC 1 cut(s) 13
StuI AGGCCT 1 cut(s) 1202
StyD4I CCNGG 4 cut(s) 718, 916, 1078, 1225
TaaI ACNGT 2 cut(s) 748, 837
TaiI ACGT 1 cut(s) 355
TaqI TCGA 2 cut(s) 62, 413
TasI AATT 2 cut(s) 149, 1025
TatI WGTACW 1 cut(s) 1005
TauI GCSGC 3 cut(s) 110, 255, 258
TfiI GAWTC 3 cut(s) 49, 553, 938
Tru1I TTAA 1 cut(s) 153
Tru9I TTAA 1 cut(s) 153
TscAI CASTG 6 cut(s) 381, 635, 757, 840, 1111, 1253
TseFI GTSAC 3 cut(s) 185, 608, 748
TseI GCWGC 6 cut(s) 621, 895, 898, 1070, 1180, 1183
Tsp45I GTSAC 3 cut(s) 185, 608, 748
TspDTI ATGAA 6 cut(s) 375, 474, 533, 747, 979, 1007
TspRI CASTG 6 cut(s) 381, 635, 757, 840, 1111, 1253
VpaK11BI GGWCC 3 cut(s) 394, 408, 814
XagI CCTNNNNNAGG 1 cut(s) 315
XapI RAATTY 2 cut(s) 149, 1025
XceI RCATGY 1 cut(s) 572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.