Rroxscaffold_1G00032870

DnaJ protein homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000572
Physical Location & Seq
Reverse (-)
47200849 .. 47203345
2497 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00032870.1

Sequence Viewer

Length: 1269 bp
ATGTTTGGAGGAGGTAGGGCGCCCAAGAAGAGCGATAACTCCAAGTACTATGAGATTCTGGGAGTTTCCAAGACTGCCTCGCCGGAAGATTTGAAGAAGGCTTACAAGAAAGCCGCCATCAAGAACCATCCTGATAAGGGTGGAGATCCTGAAAAATTTAAAGAGTTGGCTCAGGCTTATGAGGTTCTGAGCGACCCGGAGAAGAGAGAAATTTATGATCAATATGGTGAGGATGGACTTAAGGAAGGAATGGGAGCGGGTGGCCATGACCCATTTGACATCTTCTCCTCTTTCTTTGGTGGTGGTGGCAGCCCATTTGGAGGCATGGGAGGTGGTAGTAGCAGAGGACGCAGACAGAGACGTGGAGAAGATGTGGTTCACCCATTGAAGGTCTCTTTGGAAGACCTATATCTTGGAACCTCAAAGAAACTTTCCCTATCTCGCAATGTGTTGTGCTCGAAGTGCAAAGGCAAAGGATCAAAATCTGGAGCCTCAACCAAGTGTGGTGGTTGCCAAGGAACTGGTATGAAGGTCACTATTAGACATCTTGGACCCTCTATGATTCAACAGATGCAGCATGCTTGCAATGAATGTAAGGGTACCGGAGAGACCATTAGTGACAAGGACCGCTGTGGACAGTGCAAGGGAGAGAAGGTTGTTCAAGAGAAGAAAGTTTTAGAAGTGCATGTGGAGAAGGGTATGCAGAATGGACAGAAGATCACATTTCCTGGCGAAGCTGATGAAGCTCCTGACACAATCACTGGTGATATAGTGTTCATCATTCAGCAAAAGGAACATCCCAAGTTCAAGAGAAAGATGGATGACCTTTTTGTGGAGCACTCTTTATCGCTTACAGATGCTCTATGTGGTTTCCAGTTTGTGCTGAACCATTTGGATGGCAGGCAGCTACTTATCAAATCAAACCCTGGTGAAGTTGTGAAGCCTGATTCGTTTAAGGCCATCAATGATGAGGGTATGCCAATGTACCAGAGGCCATTCATGAAGGGCAAGCTGTACATCCATTTTTCGGTGGACTTCCCTGAAACTCTGAGCCCTGAGCAGGTCAAGGCTTTGGAAGCTGCTCTTCCAAGGGCATCACATCAGGAGCTGACAGACATGGAGTTGGATGAGTGTGAGGAGACGACTCTGCATGATGTGAACATGGAGGAGGAGATGAGGAGGAAACAGCACCAGGCTCATTCGGAGGCGTATGATGAGGACGACGACATGCCTGGTGGTGCACAGAGGGTGCAATGCGCACAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

422

Amino Acids

46.62

Weight (kDa)

6.1

Isoelectric Point (pI)

35.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 15 - 73 8.1e-23 DnaJ domain
DnaJ_C PF01556 126 - 347 6.5e-36 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 152 - 218 6.3e-14 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000572)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44110 AT3G44110 AT5G22060
fragaria_vesca FvH4_3g26170 FvH4_3g26170 FvH4_3g26170 FvH4_3g26220 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270
malus_domestica MD02G1258400.v1.1 MD03G1159100.v1.1 MD07G1062300.v1.1 MD11G1174700.v1.1
prunus_persica Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.6G146900_v2.0.a1 Prupe.6G146900_v2.0.a1
pyrus_communis pycom02g21960 pycom03g11140 pycom07g04780 pycom11g14940
rosa_chinensis RchiOBHm_Chr1g0332041 RchiOBHm_Chr1g0364381 RchiOBHm_Chr4g0428981 RchiOBHm_Chr5g0049001 RchiOBHm_Chr5g0049021
rosa_laevigata RLG00000007108 RLG00000013380 RLG00000027486 RLG00000029697 RLG00000034581 RLG00000034584
rosa_multiflora Rmu_co8449175.1_g000001 Rmu_sc0000441.1_g000032 Rmu_sc0000530.1_g000003 Rmu_sc0003358.1_g000010 Rmu_sc0004058.1_g000007 Rmu_sc0004522.1_g000007 Rmu_sc0008629.1_g000009 Rmu_sc0009489.1_g000007 Rmu_sc0014815.1_g000013
rosa_roxburghii Rroxscaffold_1G00032850 Rroxscaffold_1G00032870 Rroxscaffold_4G00292340 Rroxscaffold_4G00318430 Rroxscaffold_5G00370640
rosa_rugosa Rorug01G0097800 Rorug01G0097900 Rorug01G0098000 Rorug01G0315800 Rorug04G0231300 Rorug05G0241800 Rorug05G0241900 Rorug05G0242000 Rorug05G0242100.1 Rorug05G0242200 Rorug05G0242300 Rorug06G0102700 Rorug06G0102800
rosa_samantha Rh1AG121800 Rh1BG093200 Rh1CG303100 Rh1DG127500 Rh4BG293700 Rh4DG290600 Rh5AG322000 Rh5CG357500 Rh5CG357600 Rh5DG344100 Rh6BG218000
rosa_wichuraiana Rw0G008830 Rw1G009930 Rw1G028700 Rw5G030390 Rw5G030400 Rw6G018630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1258
Acc36I ACCTGC 1 cut(s) 1051
Acc65I GGTACC 1 cut(s) 599
AccB1I GGYRCC 2 cut(s) 19, 599
AccBSI CCGCTC 1 cut(s) 257
AciI CCGC 3 cut(s) 114, 257, 628
AclWI GGATC 2 cut(s) 140, 484
AcoI YGGCCR 1 cut(s) 262
AcsI RAATTY 2 cut(s) 155, 210
AcyI GRCGYC 1 cut(s) 20
AfaI GTAC 4 cut(s) 47, 601, 986, 1016
AfiI CCNNNNNNNGG 6 cut(s) 137, 320, 388, 832, 1027, 1060
AflII CTTAAG 1 cut(s) 239
AgsI TTSAA 5 cut(s) 94, 388, 566, 662, 808
AjiI CACGTC 1 cut(s) 362
AjnI CCWGG 4 cut(s) 727, 925, 1191, 1231
AjuI GAANNNNNNNTTGG 2 cut(s) 380, 412
AleI CACNNNNGTG 1 cut(s) 1264
AluBI AGCT 6 cut(s) 737, 746, 907, 1012, 1079, 1108
AluI AGCT 6 cut(s) 737, 746, 907, 1012, 1079, 1108
Alw21I GWGCWC 3 cut(s) 458, 840, 1243
Alw26I GTCTC 4 cut(s) 352, 397, 602, 1133
Alw44I GTGCAC 1 cut(s) 1239
AlwI GGATC 2 cut(s) 140, 484
AlwNI CAGNNNCTG 1 cut(s) 1108
AoxI GGCC 3 cut(s) 262, 957, 992
ApaLI GTGCAC 1 cut(s) 1239
ApeKI GCWGC 4 cut(s) 309, 574, 904, 1079
ApoI RAATTY 2 cut(s) 155, 210
Asp718I GGTACC 1 cut(s) 599
AspLEI GCGC 2 cut(s) 22, 1259
AspS9I GGNCC 2 cut(s) 551, 625
AsuC2I CCSGG 1 cut(s) 197
AsuHPI GGTGA 4 cut(s) 239, 371, 776, 941
AvaII GGWCC 2 cut(s) 551, 625
BaeGI GKGCMC 1 cut(s) 1243
BalI TGGCCA 1 cut(s) 264
BanI GGYRCC 2 cut(s) 19, 599
BanII GRGCYC 1 cut(s) 1055
BarI GAAGNNNNNNTAC 2 cut(s) 86, 118
BbsI GAAGAC 1 cut(s) 408
Bbv12I GWGCWC 3 cut(s) 458, 840, 1243
BbvI GCAGC 4 cut(s) 321, 586, 916, 1066
BccI CCATC 6 cut(s) 125, 135, 227, 811, 890, 968
BciT130I CCWGG 4 cut(s) 729, 927, 1193, 1233
BclI TGATCA 1 cut(s) 217
BcnI CCSGG 1 cut(s) 197
BcoDI GTCTC 4 cut(s) 352, 397, 602, 1133
BfoI RGCGCY 1 cut(s) 23
BfrI CTTAAG 1 cut(s) 239
BfuAI ACCTGC 1 cut(s) 1051
BisI GCNGC 5 cut(s) 114, 310, 575, 905, 1080
BlsI GCNGC 5 cut(s) 115, 311, 576, 906, 1081
BmcAI AGTACT 1 cut(s) 47
Bme1390I CCNGG 5 cut(s) 197, 729, 927, 1193, 1233
Bme18I GGWCC 2 cut(s) 551, 625
BmgBI CACGTC 1 cut(s) 362
BmgT120I GGNCC 2 cut(s) 551, 625
BmiI GGNNCC 5 cut(s) 21, 418, 490, 553, 601
BmrFI CCNGG 5 cut(s) 197, 729, 927, 1193, 1233
BmsI GCATC 3 cut(s) 561, 847, 1103
BpiI GAAGAC 1 cut(s) 408
BpmI CTGGAG 1 cut(s) 507
Bpu10I CCTNAGC 2 cut(s) 171, 1056
BpuMI CCSGG 1 cut(s) 197
BsaBI GATNNNNATC 1 cut(s) 481
BsaHI GRCGYC 1 cut(s) 20
BsaI GGTCTC 2 cut(s) 397, 602
BsaJI CCNNGG 3 cut(s) 514, 925, 1088
BsaWI WCCGGW 1 cut(s) 602
BsaXI ACNNNNNCTCC 6 cut(s) 269, 299, 357, 387, 639, 669
Bsc4I CCNNNNNNNGG 6 cut(s) 137, 320, 388, 832, 1027, 1060
Bse1I ACTGG 3 cut(s) 526, 766, 874
Bse3DI GCAATG 3 cut(s) 451, 592, 1259
Bse8I GATNNNNATC 1 cut(s) 481
BseBI CCWGG 4 cut(s) 729, 927, 1193, 1233
BseDI CCNNGG 3 cut(s) 514, 925, 1088
BseGI GGATG 7 cut(s) 127, 238, 796, 826, 901, 1017, 1132
BseJI GATNNNNATC 1 cut(s) 481
BseLI CCNNNNNNNGG 6 cut(s) 137, 320, 388, 832, 1027, 1060
BseMI GCAATG 3 cut(s) 451, 592, 1259
BseMII CTCAG 4 cut(s) 179, 185, 1040, 1047
BseNI ACTGG 3 cut(s) 526, 766, 874
BseRI GAGGAG 6 cut(s) 24, 277, 1151, 1181, 1184, 1192
BseSI GKGCMC 1 cut(s) 1243
BseXI GCAGC 4 cut(s) 321, 586, 916, 1066
BshFI GGCC 3 cut(s) 264, 959, 994
BshNI GGYRCC 2 cut(s) 19, 599
BsiHKAI GWGCWC 3 cut(s) 458, 840, 1243
BsiSI CCGG 3 cut(s) 83, 197, 603
BslI CCNNNNNNNGG 6 cut(s) 137, 320, 388, 832, 1027, 1060
BsmAI GTCTC 4 cut(s) 352, 397, 602, 1133
BsmBI CGTCTC 2 cut(s) 352, 1133
BsnI GGCC 3 cut(s) 264, 959, 994
Bso31I GGTCTC 2 cut(s) 397, 602
Bsp1286I GDGCHC 4 cut(s) 458, 840, 1055, 1243
Bsp1407I TGTACA 1 cut(s) 1014
Bsp143I GATC 4 cut(s) 145, 217, 476, 717
BspACI CCGC 3 cut(s) 114, 257, 628
BspANI GGCC 3 cut(s) 264, 959, 994
BspCNI CTCAG 4 cut(s) 180, 184, 1041, 1048
BspHI TCATGA 1 cut(s) 999
BspLI GGNNCC 5 cut(s) 21, 418, 490, 553, 601
BspMI ACCTGC 1 cut(s) 1051
BspPI GGATC 2 cut(s) 140, 484
BspQI GCTCTTC 2 cut(s) 23, 1089
BspT107I GGYRCC 2 cut(s) 19, 599
BspTI CTTAAG 1 cut(s) 239
BspTNI GGTCTC 2 cut(s) 397, 602
BsrBI CCGCTC 1 cut(s) 257
BsrDI GCAATG 3 cut(s) 451, 592, 1259
BsrGI TGTACA 1 cut(s) 1014
BsrI ACTGG 3 cut(s) 526, 766, 874
BssECI CCNNGG 3 cut(s) 514, 925, 1088
BssMI GATC 4 cut(s) 145, 217, 476, 717
BssNI GRCGYC 1 cut(s) 20
BssT1I CCWWGG 2 cut(s) 514, 1088
Bst2UI CCWGG 4 cut(s) 729, 927, 1193, 1233
Bst4CI ACNGT 1 cut(s) 639
Bst6I CTCTTC 3 cut(s) 23, 197, 1089
BstACI GRCGYC 1 cut(s) 20
BstAFI CTTAAG 1 cut(s) 239
BstAUI TGTACA 1 cut(s) 1014
BstC8I GCNNGC 4 cut(s) 579, 583, 902, 1010
BstDEI CTNAG 4 cut(s) 171, 188, 1049, 1056
BstF5I GGATG 7 cut(s) 127, 238, 796, 826, 901, 1017, 1132
BstH2I RGCGCY 1 cut(s) 23
BstHHI GCGC 2 cut(s) 22, 1259
BstKTI GATC 4 cut(s) 148, 220, 479, 720
BstMAI GTCTC 4 cut(s) 352, 397, 602, 1133
BstMBI GATC 4 cut(s) 145, 217, 476, 717
BstMWI GCNNNNNNNGC 4 cut(s) 348, 462, 743, 1076
BstNI CCWGG 4 cut(s) 729, 927, 1193, 1233
BstNSI RCATGY 3 cut(s) 581, 689, 1231
BstSCI CCNGG 5 cut(s) 195, 727, 925, 1191, 1231
BstSLI GKGCMC 1 cut(s) 1243
BstV1I GCAGC 4 cut(s) 321, 586, 916, 1066
BstV2I GAAGAC 1 cut(s) 408
BstX2I RGATCY 1 cut(s) 145
BstXI CCANNNNNNTGG 2 cut(s) 521, 896
BstYI RGATCY 1 cut(s) 145
BsuRI GGCC 3 cut(s) 264, 959, 994
BtrI CACGTC 1 cut(s) 362
BtsCI GGATG 7 cut(s) 127, 238, 796, 826, 901, 1017, 1132
BtsIMutI CAGTG 2 cut(s) 644, 759
BveI ACCTGC 1 cut(s) 1051
Cac8I GCNNGC 4 cut(s) 579, 583, 902, 1010
CaiI CAGNNNCTG 1 cut(s) 1108
CciI TCATGA 1 cut(s) 999
CfoI GCGC 2 cut(s) 22, 1259
Cfr13I GGNCC 2 cut(s) 551, 625
CseI GACGC 1 cut(s) 357
Csp6I GTAC 4 cut(s) 46, 600, 985, 1015
CspCI CAANNNNNGTGG 2 cut(s) 487, 522
CviAII CATG 9 cut(s) 266, 325, 578, 686, 1000, 1117, 1151, 1162, 1228
CviQI GTAC 4 cut(s) 46, 600, 985, 1015
DdeI CTNAG 4 cut(s) 171, 188, 1049, 1056
DinI GGCGCC 1 cut(s) 21
DpnI GATC 4 cut(s) 147, 219, 478, 719
DpnII GATC 4 cut(s) 145, 217, 476, 717
DraI TTTAAA 1 cut(s) 160
EaeI YGGCCR 1 cut(s) 262
Eam1104I CTCTTC 3 cut(s) 23, 197, 1089
EarI CTCTTC 3 cut(s) 23, 197, 1089
Eco130I CCWWGG 2 cut(s) 514, 1088
Eco24I GRGCYC 1 cut(s) 1055
Eco31I GGTCTC 2 cut(s) 397, 602
Eco47I GGWCC 2 cut(s) 551, 625
EcoRII CCWGG 4 cut(s) 727, 925, 1191, 1231
EcoT14I CCWWGG 2 cut(s) 514, 1088
EcoT38I GRGCYC 1 cut(s) 1055
EgeI GGCGCC 1 cut(s) 21
EheI GGCGCC 1 cut(s) 21
ErhI CCWWGG 2 cut(s) 514, 1088
Esp3I CGTCTC 2 cut(s) 352, 1133
FaeI CATG 9 cut(s) 269, 328, 581, 689, 1003, 1120, 1154, 1165, 1231
FalI AAGNNNNNCTT 2 cut(s) 1068, 1100
FatI CATG 9 cut(s) 265, 324, 577, 685, 999, 1116, 1150, 1161, 1227
FauI CCCGC 1 cut(s) 250
FbaI TGATCA 1 cut(s) 217
Fnu4HI GCNGC 5 cut(s) 114, 310, 575, 905, 1080
FokI GGATG 7 cut(s) 114, 245, 783, 833, 908, 1004, 1139
FriOI GRGCYC 1 cut(s) 1055
Fsp4HI GCNGC 5 cut(s) 114, 310, 575, 905, 1080
FspAI RTGCGCAY 1 cut(s) 1258
FspI TGCGCA 1 cut(s) 1258
GlaI GCGC 2 cut(s) 21, 1258
GluI GCNGC 5 cut(s) 114, 310, 575, 905, 1080
GsuI CTGGAG 1 cut(s) 507
HaeII RGCGCY 1 cut(s) 23
HaeIII GGCC 3 cut(s) 264, 959, 994
HapII CCGG 3 cut(s) 83, 197, 603
HgaI GACGC 1 cut(s) 357
HhaI GCGC 2 cut(s) 22, 1259
Hin1I GRCGYC 1 cut(s) 20
Hin1II CATG 9 cut(s) 269, 328, 581, 689, 1003, 1120, 1154, 1165, 1231
Hin6I GCGC 2 cut(s) 20, 1257
HinP1I GCGC 2 cut(s) 20, 1257
HinfI GANTC 4 cut(s) 55, 562, 947, 1144
HpaII CCGG 3 cut(s) 83, 197, 603
HphI GGTGA 4 cut(s) 239, 371, 776, 941
Hpy166II GTNNAC 5 cut(s) 379, 635, 1033, 1159, 1241
Hpy188I TCNGA 3 cut(s) 189, 1050, 1204
Hpy188III TCNNGA 9 cut(s) 121, 131, 149, 486, 662, 749, 808, 1000, 1103
Hpy8I GTNNAC 5 cut(s) 379, 635, 1033, 1159, 1241
Hpy99I CGWCG 1 cut(s) 1226
HpyAV CCTTC 7 cut(s) 91, 239, 382, 523, 646, 688, 997
HpyCH4III ACNGT 1 cut(s) 639
HpyCH4IV ACGT 1 cut(s) 361
HpyCH4V TGCA 9 cut(s) 465, 574, 585, 642, 685, 703, 1150, 1241, 1252
HpyF10VI GCNNNNNNNGC 4 cut(s) 348, 462, 743, 1076
HpyF3I CTNAG 4 cut(s) 171, 188, 1049, 1056
HpySE526I ACGT 1 cut(s) 361
Hsp92I GRCGYC 1 cut(s) 20
Hsp92II CATG 9 cut(s) 269, 328, 581, 689, 1003, 1120, 1154, 1165, 1231
HspAI GCGC 2 cut(s) 20, 1257
KasI GGCGCC 1 cut(s) 19
KpnI GGTACC 1 cut(s) 603
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 4 cut(s) 145, 217, 476, 717
LguI GCTCTTC 2 cut(s) 23, 1089
LmnI GCTCC 5 cut(s) 254, 488, 751, 835, 1105
Lsp1109I GCAGC 4 cut(s) 321, 586, 916, 1066
LweI GCATC 3 cut(s) 561, 847, 1103
MaeII ACGT 1 cut(s) 361
MaeIII GTNAC 2 cut(s) 532, 617
MalI GATC 4 cut(s) 147, 219, 478, 719
MbiI CCGCTC 1 cut(s) 257
MboI GATC 4 cut(s) 145, 217, 476, 717
MflI RGATCY 1 cut(s) 145
MhlI GDGCHC 4 cut(s) 458, 840, 1055, 1243
MlsI TGGCCA 1 cut(s) 264
MluCI AATT 2 cut(s) 155, 210
MluNI TGGCCA 1 cut(s) 264
Mly113I GGCGCC 1 cut(s) 20
MlyI GAGTC 1 cut(s) 1138
MmeI TCCRAC 1 cut(s) 1104
Mox20I TGGCCA 1 cut(s) 264
MscI TGGCCA 1 cut(s) 264
MseI TTAA 3 cut(s) 159, 240, 954
MslI CAYNNNNRTG 2 cut(s) 894, 1264
Msp20I TGGCCA 1 cut(s) 264
MspA1I CMGCKG 1 cut(s) 630
MspCI CTTAAG 1 cut(s) 239
MspI CCGG 3 cut(s) 83, 197, 603
MspR9I CCNGG 5 cut(s) 197, 729, 927, 1193, 1233
MvaI CCWGG 4 cut(s) 729, 927, 1193, 1233
MwoI GCNNNNNNNGC 4 cut(s) 348, 462, 743, 1076
NarI GGCGCC 1 cut(s) 20
NciI CCSGG 1 cut(s) 197
NdeII GATC 4 cut(s) 145, 217, 476, 717
NlaIII CATG 9 cut(s) 269, 328, 581, 689, 1003, 1120, 1154, 1165, 1231
NlaIV GGNNCC 5 cut(s) 21, 418, 490, 553, 601
NmuCI GTSAC 2 cut(s) 532, 617
NsbI TGCGCA 1 cut(s) 1258
NspI RCATGY 3 cut(s) 581, 689, 1231
OliI CACNNNNGTG 1 cut(s) 1264
PaeI GCATGC 1 cut(s) 581
PagI TCATGA 1 cut(s) 999
PciSI GCTCTTC 2 cut(s) 23, 1089
PfeI GAWTC 3 cut(s) 55, 562, 947
PkrI GCNGC 5 cut(s) 115, 311, 576, 906, 1081
PleI GAGTC 1 cut(s) 1138
PluTI GGCGCC 1 cut(s) 23
PpsI GAGTC 1 cut(s) 1138
Psp6I CCWGG 4 cut(s) 727, 925, 1191, 1231
PspGI CCWGG 4 cut(s) 727, 925, 1191, 1231
PspN4I GGNNCC 5 cut(s) 21, 418, 490, 553, 601
PspPI GGNCC 2 cut(s) 551, 625
PstNI CAGNNNCTG 1 cut(s) 1108
PsuI RGATCY 1 cut(s) 145
RsaI GTAC 4 cut(s) 47, 601, 986, 1016
RsaNI GTAC 4 cut(s) 46, 600, 985, 1015
RseI CAYNNNNRTG 2 cut(s) 894, 1264
SapI GCTCTTC 2 cut(s) 23, 1089
SaqAI TTAA 3 cut(s) 159, 240, 954
SatI GCNGC 5 cut(s) 114, 310, 575, 905, 1080
Sau3AI GATC 4 cut(s) 145, 217, 476, 717
Sau96I GGNCC 2 cut(s) 551, 625
ScaI AGTACT 1 cut(s) 47
SchI GAGTC 1 cut(s) 1138
ScrFI CCNGG 5 cut(s) 197, 729, 927, 1193, 1233
SduI GDGCHC 4 cut(s) 458, 840, 1055, 1243
SfaNI GCATC 3 cut(s) 561, 847, 1103
SfoI GGCGCC 1 cut(s) 21
SinI GGWCC 2 cut(s) 551, 625
SmiMI CAYNNNNRTG 2 cut(s) 894, 1264
SmlI CTYRAG 1 cut(s) 239
SmoI CTYRAG 1 cut(s) 239
SphI GCATGC 1 cut(s) 581
Sse9I AATT 2 cut(s) 155, 210
SsiI CCGC 3 cut(s) 114, 257, 628
SspDI GGCGCC 1 cut(s) 19
StyD4I CCNGG 5 cut(s) 195, 727, 925, 1191, 1231
StyI CCWWGG 2 cut(s) 514, 1088
TaaI ACNGT 1 cut(s) 639
TaiI ACGT 1 cut(s) 364
TaqI TCGA 1 cut(s) 458
TasI AATT 2 cut(s) 155, 210
TatI WGTACW 2 cut(s) 45, 1014
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 3 cut(s) 55, 562, 947
Tru1I TTAA 3 cut(s) 159, 240, 954
Tru9I TTAA 3 cut(s) 159, 240, 954
TscAI CASTG 2 cut(s) 644, 766
TseFI GTSAC 2 cut(s) 532, 617
TseI GCWGC 4 cut(s) 309, 574, 904, 1079
Tsp45I GTSAC 2 cut(s) 532, 617
TspDTI ATGAA 6 cut(s) 542, 603, 756, 766, 988, 1016
TspRI CASTG 2 cut(s) 644, 766
Vha464I CTTAAG 1 cut(s) 239
VneI GTGCAC 1 cut(s) 1239
VpaK11BI GGWCC 2 cut(s) 551, 625
XapI RAATTY 2 cut(s) 155, 210
XceI RCATGY 3 cut(s) 581, 689, 1231
ZrmI AGTACT 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.