Rroxscaffold_4G00292340

DnaJ protein homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000572
Physical Location & Seq
Forward (+)
12669820 .. 12671902
2083 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00292340.1

Sequence Viewer

Length: 1365 bp
ATGTTTGGAGGAGGTAGGGCAGCGAAGAAGAGTGATAACTCCAAGTACTATGAGATTCTGGGAGTGTCCAAGACTACTTCGGCTGAAGATTTGAAGAAGGCCTACAAGAAAGCAGCCATGAAGAACCATCCTGATAAGGGCGGAGATCCAGAAAAATTTAAAGAGTTGGCTCAGGCTTATGAGGTTCTGAGTGACCCGGAGAAGCGCCAAGTTTATGATCAGTATGGTGAGGATGGACTTAAGGAAGGAATGCAACCGGGTGGCCATGACCCATTTGACATCTTCTCCTCTTTCTTTGGTGGTCGTGGCATGCCAGGTGGTGGTGGAGGACGGAGACAGAGACGTGGAGAAGATGTGGTTCACTCATTGAAGGTCTCTTTGGAAGACCTATATCTTGGGACCTCAAAGAAACTTTCGCTCTCTCGCAATGTGTTGTGCTCCAAGTGCAAAGGCAAGGGGTCAAAATCTGGAGCCTCGACCAAGTGTGATGGTTGCAAAGGAACTGGAATGAAGGTCACTATTAGGCAGTTTGGACCTTCTATGTTTCAGCAGATGCAGCATGCTTGCAATGATTGTAAGGGTACTGGAGAGACCATCAGGGCCAAGGACCGCTGTGGACAATGTAAGGGAGAGAAAGTTGTTCAAGAAAAGAAAGTTTTACAAGTCCATGTGGAGAAGGGTATGCAGAATGGACAGAAGATCACATTTCCTGGTGAAGCTGATGAAGCTCCTGACACAGTCACTGGTGATGTAGTGTTCGTCATTCAGCAGAAGGAACATCCCAAATTCAAGAGAAAGATGGATGATCTTTTTGTGGAGCACTCTTTGTCACTCACAGATGCTCTATGTGGTTTCCAGTTTGTGCTGAACCATTTGGATGGCAGGCAGCTACTTATCAAATCAAACCCCGGCCAAGTTGTGAAGCCTGATTCTTTTAAGGCCGTCAATGATGAGGGTATGCCAATGTACCAGAGGCCATTCATGAAGGGCAAGCTGTACATTCATTTCTCAGTGGAATTCCCTGAAACTCTCAGCCTTGAGCAGGTCAAGGCTTTGGAAGCTGCTCTTCCATCAAGGGCATCATCTCAGAAGCTGACAGATATGGAGTTGGATGAGTGTGAGGAGACGACTCTGCATAATGTGAACATGGAGGAGGAGATGAGAAGGAAACAGCACCAGGCTCATTCGGAGGCATATGAGGAGGACAACGATATGCCTGGTGGTGCAGAGAGGTGCAATGCGCACAGCAGTGATTGTAACTTCTGTGATCATACAACCAACTACTTGGATGTTATGGTTAGTTGGAAACCACATTGCTACAAAAGCTCAGACATAGACAATCGCATAAGCATGACCCATGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

454

Amino Acids

50.64

Weight (kDa)

6.77

Isoelectric Point (pI)

31.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 15 - 73 2.4e-22 DnaJ domain
DnaJ_C PF01556 120 - 341 5.5e-36 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 146 - 212 5.6e-15 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000572)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44110 AT3G44110 AT5G22060
fragaria_vesca FvH4_3g26170 FvH4_3g26170 FvH4_3g26170 FvH4_3g26220 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270
malus_domestica MD02G1258400.v1.1 MD03G1159100.v1.1 MD07G1062300.v1.1 MD11G1174700.v1.1
prunus_persica Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.6G146900_v2.0.a1 Prupe.6G146900_v2.0.a1
pyrus_communis pycom02g21960 pycom03g11140 pycom07g04780 pycom11g14940
rosa_chinensis RchiOBHm_Chr1g0332041 RchiOBHm_Chr1g0364381 RchiOBHm_Chr4g0428981 RchiOBHm_Chr5g0049001 RchiOBHm_Chr5g0049021
rosa_laevigata RLG00000007108 RLG00000013380 RLG00000027486 RLG00000029697 RLG00000034581 RLG00000034584
rosa_multiflora Rmu_co8449175.1_g000001 Rmu_sc0000441.1_g000032 Rmu_sc0000530.1_g000003 Rmu_sc0003358.1_g000010 Rmu_sc0004058.1_g000007 Rmu_sc0004522.1_g000007 Rmu_sc0008629.1_g000009 Rmu_sc0009489.1_g000007 Rmu_sc0014815.1_g000013
rosa_roxburghii Rroxscaffold_1G00032850 Rroxscaffold_1G00032870 Rroxscaffold_4G00292340 Rroxscaffold_4G00318430 Rroxscaffold_5G00370640
rosa_rugosa Rorug01G0097800 Rorug01G0097900 Rorug01G0098000 Rorug01G0315800 Rorug04G0231300 Rorug05G0241800 Rorug05G0241900 Rorug05G0242000 Rorug05G0242100.1 Rorug05G0242200 Rorug05G0242300 Rorug06G0102700 Rorug06G0102800
rosa_samantha Rh1AG121800 Rh1BG093200 Rh1CG303100 Rh1DG127500 Rh4BG293700 Rh4DG290600 Rh5AG322000 Rh5CG357500 Rh5CG357600 Rh5DG344100 Rh6BG218000
rosa_wichuraiana Rw0G008830 Rw1G009930 Rw1G028700 Rw5G030390 Rw5G030400 Rw6G018630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1242
Acc36I ACCTGC 1 cut(s) 1033
AccB7I CCANNNNNTGG 1 cut(s) 320
AciI CCGC 2 cut(s) 141, 610
AclWI GGATC 1 cut(s) 140
AcoI YGGCCR 2 cut(s) 262, 910
AcsI RAATTY 3 cut(s) 155, 785, 1016
AcuI CTGAAG 1 cut(s) 105
AfaI GTAC 4 cut(s) 47, 583, 968, 998
AfiI CCNNNNNNNGG 3 cut(s) 137, 320, 1042
AflII CTTAAG 1 cut(s) 239
AgsI TTSAA 4 cut(s) 94, 370, 644, 790
AjiI CACGTC 1 cut(s) 344
AjnI CCWGG 4 cut(s) 313, 709, 1176, 1216
AjuI GAANNNNNNNTTGG 2 cut(s) 362, 394
AleI CACNNNNGTG 1 cut(s) 1248
AluBI AGCT 7 cut(s) 719, 728, 889, 994, 1061, 1093, 1326
AluI AGCT 7 cut(s) 719, 728, 889, 994, 1061, 1093, 1326
Alw21I GWGCWC 2 cut(s) 440, 822
Alw26I GTCTC 5 cut(s) 328, 334, 379, 584, 1118
AlwI GGATC 1 cut(s) 140
AlwNI CAGNNNCTG 2 cut(s) 743, 1093
AoxI GGCC 6 cut(s) 99, 262, 600, 910, 939, 974
ApeKI GCWGC 5 cut(s) 20, 113, 556, 886, 1061
ApoI RAATTY 3 cut(s) 155, 785, 1016
AspLEI GCGC 2 cut(s) 207, 1243
AspS9I GGNCC 4 cut(s) 399, 533, 600, 607
AsuC2I CCSGG 3 cut(s) 197, 258, 909
AsuHPI GGTGA 3 cut(s) 239, 725, 758
AvaII GGWCC 3 cut(s) 399, 533, 607
BalI TGGCCA 1 cut(s) 264
BarI GAAGNNNNNNTAC 2 cut(s) 86, 118
BbsI GAAGAC 1 cut(s) 390
Bbv12I GWGCWC 2 cut(s) 440, 822
BbvI GCAGC 5 cut(s) 32, 125, 568, 898, 1048
BccI CCATC 7 cut(s) 135, 227, 482, 602, 793, 872, 1078
BceAI ACGGC 1 cut(s) 926
BciT130I CCWGG 4 cut(s) 315, 711, 1178, 1218
BclI TGATCA 2 cut(s) 217, 1267
BcnI CCSGG 3 cut(s) 197, 258, 909
BcoDI GTCTC 5 cut(s) 328, 334, 379, 584, 1118
BfoI RGCGCY 1 cut(s) 208
BfrI CTTAAG 1 cut(s) 239
BfuAI ACCTGC 1 cut(s) 1033
BisI GCNGC 5 cut(s) 21, 114, 557, 887, 1062
BlsI GCNGC 5 cut(s) 22, 115, 558, 888, 1063
BmcAI AGTACT 1 cut(s) 47
Bme1390I CCNGG 7 cut(s) 197, 258, 315, 711, 909, 1178, 1218
Bme18I GGWCC 3 cut(s) 399, 533, 607
BmgBI CACGTC 1 cut(s) 344
BmgT120I GGNCC 4 cut(s) 399, 533, 600, 607
BmiI GGNNCC 2 cut(s) 400, 472
BmrFI CCNGG 7 cut(s) 197, 258, 315, 711, 909, 1178, 1218
BmsI GCATC 3 cut(s) 543, 829, 1088
BpiI GAAGAC 1 cut(s) 390
BpmI CTGGAG 2 cut(s) 489, 606
Bpu10I CCTNAGC 1 cut(s) 171
BpuEI CTTGAG 1 cut(s) 1058
BpuMI CCSGG 3 cut(s) 197, 258, 909
BsaI GGTCTC 2 cut(s) 379, 584
BsaJI CCNNGG 2 cut(s) 603, 907
BsaXI ACNNNNNCTCC 6 cut(s) 269, 299, 339, 369, 621, 651
Bsc4I CCNNNNNNNGG 3 cut(s) 137, 320, 1042
Bse1I ACTGG 4 cut(s) 508, 589, 748, 856
Bse3DI GCAATG 4 cut(s) 433, 574, 1243, 1312
BseBI CCWGG 4 cut(s) 315, 711, 1178, 1218
BseDI CCNNGG 2 cut(s) 603, 907
BseGI GGATG 7 cut(s) 127, 238, 778, 808, 883, 1117, 1294
BseLI CCNNNNNNNGG 3 cut(s) 137, 320, 1042
BseMI GCAATG 4 cut(s) 433, 574, 1243, 1312
BseMII CTCAG 6 cut(s) 179, 185, 1023, 1045, 1100, 1341
BseNI ACTGG 4 cut(s) 508, 589, 748, 856
BseRI GAGGAG 6 cut(s) 24, 277, 1136, 1166, 1169, 1214
BseXI GCAGC 5 cut(s) 32, 125, 568, 898, 1048
BsgI GTGCAG 1 cut(s) 1245
BshFI GGCC 6 cut(s) 101, 264, 602, 912, 941, 976
BsiHKAI GWGCWC 2 cut(s) 440, 822
BsiSI CCGG 3 cut(s) 197, 257, 909
BslFI GGGAC 1 cut(s) 412
BslI CCNNNNNNNGG 3 cut(s) 137, 320, 1042
BsmAI GTCTC 5 cut(s) 328, 334, 379, 584, 1118
BsmBI CGTCTC 2 cut(s) 334, 1118
BsmFI GGGAC 1 cut(s) 412
BsmI GAATGC 1 cut(s) 255
BsnI GGCC 6 cut(s) 101, 264, 602, 912, 941, 976
Bso31I GGTCTC 2 cut(s) 379, 584
Bsp1286I GDGCHC 2 cut(s) 440, 822
Bsp1407I TGTACA 1 cut(s) 996
Bsp143I GATC 5 cut(s) 145, 217, 699, 805, 1267
BspACI CCGC 2 cut(s) 141, 610
BspANI GGCC 6 cut(s) 101, 264, 602, 912, 941, 976
BspCNI CTCAG 6 cut(s) 180, 184, 1022, 1044, 1099, 1340
BspHI TCATGA 1 cut(s) 981
BspLI GGNNCC 2 cut(s) 400, 472
BspMI ACCTGC 1 cut(s) 1033
BspPI GGATC 1 cut(s) 140
BspQI GCTCTTC 1 cut(s) 1071
BspTI CTTAAG 1 cut(s) 239
BspTNI GGTCTC 2 cut(s) 379, 584
BsrDI GCAATG 4 cut(s) 433, 574, 1243, 1312
BsrGI TGTACA 1 cut(s) 996
BsrI ACTGG 4 cut(s) 508, 589, 748, 856
BssECI CCNNGG 2 cut(s) 603, 907
BssMI GATC 5 cut(s) 145, 217, 699, 805, 1267
BssT1I CCWWGG 1 cut(s) 603
Bst2UI CCWGG 4 cut(s) 315, 711, 1178, 1218
Bst4CI ACNGT 1 cut(s) 739
Bst6I CTCTTC 2 cut(s) 23, 1071
BstAFI CTTAAG 1 cut(s) 239
BstAUI TGTACA 1 cut(s) 996
BstC8I GCNNGC 5 cut(s) 311, 561, 565, 884, 992
BstDEI CTNAG 6 cut(s) 171, 188, 1009, 1031, 1086, 1327
BstENI CCTNNNNNAGG 1 cut(s) 1040
BstF5I GGATG 7 cut(s) 127, 238, 778, 808, 883, 1117, 1294
BstH2I RGCGCY 1 cut(s) 208
BstHHI GCGC 2 cut(s) 207, 1243
BstKTI GATC 5 cut(s) 148, 220, 702, 808, 1270
BstMAI GTCTC 5 cut(s) 328, 334, 379, 584, 1118
BstMBI GATC 5 cut(s) 145, 217, 699, 805, 1267
BstMWI GCNNNNNNNGC 5 cut(s) 444, 556, 725, 1058, 1323
BstNI CCWGG 4 cut(s) 315, 711, 1178, 1218
BstNSI RCATGY 2 cut(s) 313, 563
BstSCI CCNGG 7 cut(s) 195, 256, 313, 709, 907, 1176, 1216
BstV1I GCAGC 5 cut(s) 32, 125, 568, 898, 1048
BstV2I GAAGAC 1 cut(s) 390
BstX2I RGATCY 1 cut(s) 145
BstXI CCANNNNNNTGG 2 cut(s) 878, 1285
BstYI RGATCY 1 cut(s) 145
BsuRI GGCC 6 cut(s) 101, 264, 602, 912, 941, 976
BtrI CACGTC 1 cut(s) 344
BtsCI GGATG 7 cut(s) 127, 238, 778, 808, 883, 1117, 1294
BtsI GCAGTG 1 cut(s) 1255
BtsIMutI CAGTG 3 cut(s) 741, 1017, 1255
BveI ACCTGC 1 cut(s) 1033
Cac8I GCNNGC 5 cut(s) 311, 561, 565, 884, 992
CaiI CAGNNNCTG 2 cut(s) 743, 1093
CciI TCATGA 1 cut(s) 981
CfoI GCGC 2 cut(s) 207, 1243
Cfr13I GGNCC 4 cut(s) 399, 533, 600, 607
Csp6I GTAC 4 cut(s) 46, 582, 967, 997
CviAII CATG 9 cut(s) 118, 266, 310, 560, 668, 982, 1147, 1351, 1358
CviQI GTAC 4 cut(s) 46, 582, 967, 997
DdeI CTNAG 6 cut(s) 171, 188, 1009, 1031, 1086, 1327
DpnI GATC 5 cut(s) 147, 219, 701, 807, 1269
DpnII GATC 5 cut(s) 145, 217, 699, 805, 1267
DraI TTTAAA 1 cut(s) 160
EaeI YGGCCR 2 cut(s) 262, 910
Eam1104I CTCTTC 2 cut(s) 23, 1071
EarI CTCTTC 2 cut(s) 23, 1071
EciI GGCGGA 1 cut(s) 156
Eco130I CCWWGG 1 cut(s) 603
Eco147I AGGCCT 1 cut(s) 101
Eco31I GGTCTC 2 cut(s) 379, 584
Eco47I GGWCC 3 cut(s) 399, 533, 607
Eco57I CTGAAG 1 cut(s) 105
EcoNI CCTNNNNNAGG 1 cut(s) 1040
EcoO109I RGGNCCY 1 cut(s) 399
EcoRI GAATTC 1 cut(s) 1016
EcoRII CCWGG 4 cut(s) 313, 709, 1176, 1216
EcoT14I CCWWGG 1 cut(s) 603
ErhI CCWWGG 1 cut(s) 603
Esp3I CGTCTC 2 cut(s) 334, 1118
FaeI CATG 9 cut(s) 121, 269, 313, 563, 671, 985, 1150, 1354, 1361
FalI AAGNNNNNCTT 2 cut(s) 1050, 1082
FaqI GGGAC 1 cut(s) 412
FatI CATG 9 cut(s) 117, 265, 309, 559, 667, 981, 1146, 1350, 1357
FauNDI CATATG 1 cut(s) 1195
FbaI TGATCA 2 cut(s) 217, 1267
Fnu4HI GCNGC 5 cut(s) 21, 114, 557, 887, 1062
FokI GGATG 7 cut(s) 114, 245, 765, 815, 890, 1124, 1301
Fsp4HI GCNGC 5 cut(s) 21, 114, 557, 887, 1062
FspAI RTGCGCAY 1 cut(s) 1242
FspI TGCGCA 1 cut(s) 1242
GlaI GCGC 2 cut(s) 206, 1242
GluI GCNGC 5 cut(s) 21, 114, 557, 887, 1062
GsuI CTGGAG 2 cut(s) 489, 606
HaeII RGCGCY 1 cut(s) 208
HaeIII GGCC 6 cut(s) 101, 264, 602, 912, 941, 976
HapII CCGG 3 cut(s) 197, 257, 909
HhaI GCGC 2 cut(s) 207, 1243
Hin1II CATG 9 cut(s) 121, 269, 313, 563, 671, 985, 1150, 1354, 1361
Hin6I GCGC 2 cut(s) 205, 1241
HinP1I GCGC 2 cut(s) 205, 1241
HinfI GANTC 3 cut(s) 55, 929, 1129
HpaII CCGG 3 cut(s) 197, 257, 909
HphI GGTGA 3 cut(s) 239, 725, 758
Hpy166II GTNNAC 3 cut(s) 361, 617, 1144
Hpy188I TCNGA 4 cut(s) 189, 1089, 1189, 1330
Hpy188III TCNNGA 7 cut(s) 131, 149, 468, 644, 731, 790, 982
Hpy8I GTNNAC 3 cut(s) 361, 617, 1144
HpyAV CCTTC 9 cut(s) 91, 239, 364, 505, 546, 670, 766, 979, 1158
HpyCH4III ACNGT 1 cut(s) 739
HpyCH4IV ACGT 1 cut(s) 343
HpyCH4V TGCA 9 cut(s) 253, 447, 495, 556, 567, 685, 1135, 1226, 1236
HpyF10VI GCNNNNNNNGC 5 cut(s) 444, 556, 725, 1058, 1323
HpyF3I CTNAG 6 cut(s) 171, 188, 1009, 1031, 1086, 1327
HpySE526I ACGT 1 cut(s) 343
Hsp92II CATG 9 cut(s) 121, 269, 313, 563, 671, 985, 1150, 1354, 1361
HspAI GCGC 2 cut(s) 205, 1241
Ksp22I TGATCA 2 cut(s) 217, 1267
Kzo9I GATC 5 cut(s) 145, 217, 699, 805, 1267
LguI GCTCTTC 1 cut(s) 1071
LmnI GCTCC 4 cut(s) 443, 470, 733, 817
Lsp1109I GCAGC 5 cut(s) 32, 125, 568, 898, 1048
LweI GCATC 3 cut(s) 543, 829, 1088
MaeII ACGT 1 cut(s) 343
MaeIII GTNAC 5 cut(s) 191, 514, 739, 828, 1256
MalI GATC 5 cut(s) 147, 219, 701, 807, 1269
MboI GATC 5 cut(s) 145, 217, 699, 805, 1267
MflI RGATCY 1 cut(s) 145
MhlI GDGCHC 2 cut(s) 440, 822
MlsI TGGCCA 1 cut(s) 264
MluCI AATT 3 cut(s) 155, 785, 1016
MluNI TGGCCA 1 cut(s) 264
MlyI GAGTC 1 cut(s) 1123
MmeI TCCRAC 2 cut(s) 1089, 1283
Mox20I TGGCCA 1 cut(s) 264
MscI TGGCCA 1 cut(s) 264
MseI TTAA 3 cut(s) 159, 240, 936
MslI CAYNNNNRTG 3 cut(s) 876, 1248, 1349
Msp20I TGGCCA 1 cut(s) 264
MspA1I CMGCKG 1 cut(s) 612
MspCI CTTAAG 1 cut(s) 239
MspI CCGG 3 cut(s) 197, 257, 909
MspR9I CCNGG 7 cut(s) 197, 258, 315, 711, 909, 1178, 1218
Mva1269I GAATGC 1 cut(s) 255
MvaI CCWGG 4 cut(s) 315, 711, 1178, 1218
MwoI GCNNNNNNNGC 5 cut(s) 444, 556, 725, 1058, 1323
NciI CCSGG 3 cut(s) 197, 258, 909
NdeI CATATG 1 cut(s) 1195
NdeII GATC 5 cut(s) 145, 217, 699, 805, 1267
NlaIII CATG 9 cut(s) 121, 269, 313, 563, 671, 985, 1150, 1354, 1361
NlaIV GGNNCC 2 cut(s) 400, 472
NmuCI GTSAC 4 cut(s) 191, 514, 739, 828
NsbI TGCGCA 1 cut(s) 1242
NspI RCATGY 2 cut(s) 313, 563
OliI CACNNNNGTG 1 cut(s) 1248
PaeI GCATGC 2 cut(s) 313, 563
PagI TCATGA 1 cut(s) 981
PceI AGGCCT 1 cut(s) 101
PciSI GCTCTTC 1 cut(s) 1071
PctI GAATGC 1 cut(s) 255
PfeI GAWTC 2 cut(s) 55, 929
PflFI GACNNNGTC 1 cut(s) 737
PflMI CCANNNNNTGG 1 cut(s) 320
PkrI GCNGC 5 cut(s) 22, 115, 558, 888, 1063
PleI GAGTC 1 cut(s) 1123
PpsI GAGTC 1 cut(s) 1123
PpuMI RGGWCCY 1 cut(s) 399
Psp5II RGGWCCY 1 cut(s) 399
Psp6I CCWGG 4 cut(s) 313, 709, 1176, 1216
PspGI CCWGG 4 cut(s) 313, 709, 1176, 1216
PspN4I GGNNCC 2 cut(s) 400, 472
PspPI GGNCC 4 cut(s) 399, 533, 600, 607
PspPPI RGGWCCY 1 cut(s) 399
PstNI CAGNNNCTG 2 cut(s) 743, 1093
PsuI RGATCY 1 cut(s) 145
PsyI GACNNNGTC 1 cut(s) 737
RsaI GTAC 4 cut(s) 47, 583, 968, 998
RsaNI GTAC 4 cut(s) 46, 582, 967, 997
RseI CAYNNNNRTG 3 cut(s) 876, 1248, 1349
SapI GCTCTTC 1 cut(s) 1071
SaqAI TTAA 3 cut(s) 159, 240, 936
SatI GCNGC 5 cut(s) 21, 114, 557, 887, 1062
Sau3AI GATC 5 cut(s) 145, 217, 699, 805, 1267
Sau96I GGNCC 4 cut(s) 399, 533, 600, 607
ScaI AGTACT 1 cut(s) 47
SchI GAGTC 1 cut(s) 1123
ScrFI CCNGG 7 cut(s) 197, 258, 315, 711, 909, 1178, 1218
SduI GDGCHC 2 cut(s) 440, 822
SfaNI GCATC 3 cut(s) 543, 829, 1088
SinI GGWCC 3 cut(s) 399, 533, 607
SmiMI CAYNNNNRTG 3 cut(s) 876, 1248, 1349
SmlI CTYRAG 2 cut(s) 239, 1037
SmoI CTYRAG 2 cut(s) 239, 1037
SphI GCATGC 2 cut(s) 313, 563
Sse9I AATT 3 cut(s) 155, 785, 1016
SseBI AGGCCT 1 cut(s) 101
SsiI CCGC 2 cut(s) 141, 610
StuI AGGCCT 1 cut(s) 101
StyD4I CCNGG 7 cut(s) 195, 256, 313, 709, 907, 1176, 1216
StyI CCWWGG 1 cut(s) 603
TaaI ACNGT 1 cut(s) 739
TaiI ACGT 1 cut(s) 346
TaqI TCGA 1 cut(s) 476
TasI AATT 3 cut(s) 155, 785, 1016
TatI WGTACW 2 cut(s) 45, 996
TfiI GAWTC 2 cut(s) 55, 929
Tru1I TTAA 3 cut(s) 159, 240, 936
Tru9I TTAA 3 cut(s) 159, 240, 936
TscAI CASTG 3 cut(s) 748, 1017, 1255
TseFI GTSAC 4 cut(s) 191, 514, 739, 828
TseI GCWGC 5 cut(s) 20, 113, 556, 886, 1061
Tsp45I GTSAC 4 cut(s) 191, 514, 739, 828
TspDTI ATGAA 6 cut(s) 134, 524, 738, 970, 992, 998
TspGWI ACGGA 1 cut(s) 346
TspRI CASTG 3 cut(s) 748, 1017, 1255
Tth111I GACNNNGTC 1 cut(s) 737
Van91I CCANNNNNTGG 1 cut(s) 320
Vha464I CTTAAG 1 cut(s) 239
VpaK11BI GGWCC 3 cut(s) 399, 533, 607
XagI CCTNNNNNAGG 1 cut(s) 1040
XapI RAATTY 3 cut(s) 155, 785, 1016
XceI RCATGY 2 cut(s) 313, 563
ZrmI AGTACT 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.