RchiOBHm_Chr1g0364381

DnaJ protein homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000572
Physical Location & Seq
Reverse (-)
55578989 .. 55580257
1269 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58907

Sequence Viewer

Length: 1269 bp
ATGTTTGGAGGAGGTAGGGCAGCGAAGAAGAGTGATAACTCCAAGTACTATGAGATTCTGGGAGTGTCCAAGACTACTTCGGCTGAAGATTTGAAGAAGGCGTACAAGAAAGCCGCCATGAAGAACCATCCTGATAAGGGCGGAGATCCAGAAAAATTTAAAGAGTTGGCTCAGGCTTATGAGGTTCTAAGTGACCCGGAGAAGCGCCAAGTTTATGATCAGTATGGTGAGGACGGACTGAAGGAAGGAATGCAACCGGGTGGCCATGACCCATCTGACATCTTCTCCTCTTTCTTTGGTGGTCGTGGCAGCCCATTTGGAGGCATGCCAGGTGGTGGTGGAGGACGGAGACAGAGACGTGGAGAAGATGTGGTTCACTCATTGAAGGTCTCTTTGGAAGACCTATATCTTGGGACCTCAAAGAAACTTTCGCTCTCTCGCAATGTGTTGTGCTCCAAGTGCAAAGGCAAGGGGTCAAAATCTGGAGCCTCGACCAAGTGTGATGGTTGCAAAGGAACTGGAATGAAGGTCACTGTTAGGCAGTTTGGACCTTCTATGTTTCAACAGTTGCAGCATGCTTGCGATGATTGTAAGGGTACTGGAGAGACCATCAGGGCCAAGGACCGCTGTGGACAATGTAAGGGGGAGAAAGTTGTTCAAGAAAAGAAAGTTTTACAAGTCCATGTGGAGAAGGGTATGCAGAATGGACAGAAGATCACATTTCCTGGTGAAGCTGATGAAGCTCCTGACACAGTCACTGGTGATATAGTGTTCGTCATTCAGCAAAAGGAACATCCTAAATTCAAGAGAAAGATGGATGATCTTTTTGTGGAGCACTCTTTGTCACTCACAGATGCTCTATGTGGTTTCCAGTTTGTGCTGAACCATTTGGATGGCAGGCAGCTACTTATCAAATCAAACCCTGGCCAAGTTGTGAAGCCTGACTCGTTTAAGGCCGTCAATGATGAGGGTATGCCAATGTACCAGAGGCCATTCATGAAGGGCAAGCTGTACATTCATTTCTCAGTGGAATTCCCTGAAACTCTGAGCCTCGAGCAGGTCAAGGCTTTGGAAGCTGATCTTCCATCAAGGGCATCATCTCAGAAACTGACAGATACGGAGTTGGATGAGTGTGAGGAGACGACTCTGCATAATGTGAACATGGAGGAGGAGATGAGAAGGAAACAGCACCAGGCTCATTCGGAGGCATATGAGGAGGACAACGACATGCCTGGTGGTGCAGAGAGGGTGCAATGTGCACAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

422

Amino Acids

46.7

Weight (kDa)

6.87

Isoelectric Point (pI)

36.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 15 - 73 2.1e-22 DnaJ domain
DnaJ_C PF01556 125 - 346 5e-36 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 151 - 217 5.5e-15 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000572)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44110 AT3G44110 AT5G22060
fragaria_vesca FvH4_3g26170 FvH4_3g26170 FvH4_3g26170 FvH4_3g26220 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270
malus_domestica MD02G1258400.v1.1 MD03G1159100.v1.1 MD07G1062300.v1.1 MD11G1174700.v1.1
prunus_persica Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.6G146900_v2.0.a1 Prupe.6G146900_v2.0.a1
pyrus_communis pycom02g21960 pycom03g11140 pycom07g04780 pycom11g14940
rosa_chinensis RchiOBHm_Chr1g0332041 RchiOBHm_Chr1g0364381 RchiOBHm_Chr4g0428981 RchiOBHm_Chr5g0049001 RchiOBHm_Chr5g0049021
rosa_laevigata RLG00000007108 RLG00000013380 RLG00000027486 RLG00000029697 RLG00000034581 RLG00000034584
rosa_multiflora Rmu_co8449175.1_g000001 Rmu_sc0000441.1_g000032 Rmu_sc0000530.1_g000003 Rmu_sc0003358.1_g000010 Rmu_sc0004058.1_g000007 Rmu_sc0004522.1_g000007 Rmu_sc0008629.1_g000009 Rmu_sc0009489.1_g000007 Rmu_sc0014815.1_g000013
rosa_roxburghii Rroxscaffold_1G00032850 Rroxscaffold_1G00032870 Rroxscaffold_4G00292340 Rroxscaffold_4G00318430 Rroxscaffold_5G00370640
rosa_rugosa Rorug01G0097800 Rorug01G0097900 Rorug01G0098000 Rorug01G0315800 Rorug04G0231300 Rorug05G0241800 Rorug05G0241900 Rorug05G0242000 Rorug05G0242100.1 Rorug05G0242200 Rorug05G0242300 Rorug06G0102700 Rorug06G0102800
rosa_samantha Rh1AG121800 Rh1BG093200 Rh1CG303100 Rh1DG127500 Rh4BG293700 Rh4DG290600 Rh5AG322000 Rh5CG357500 Rh5CG357600 Rh5DG344100 Rh6BG218000
rosa_wichuraiana Rw0G008830 Rw1G009930 Rw1G028700 Rw5G030390 Rw5G030400 Rw6G018630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1048
AccB7I CCANNNNNTGG 1 cut(s) 335
AciI CCGC 3 cut(s) 114, 141, 625
AclWI GGATC 1 cut(s) 140
AcoI YGGCCR 2 cut(s) 262, 925
AcsI RAATTY 3 cut(s) 155, 800, 1031
AcuI CTGAAG 2 cut(s) 105, 260
AfaI GTAC 5 cut(s) 47, 104, 598, 983, 1013
AfiI CCNNNNNNNGG 4 cut(s) 137, 320, 335, 1057
AgsI TTSAA 5 cut(s) 94, 385, 563, 659, 805
AjiI CACGTC 1 cut(s) 359
AjnI CCWGG 5 cut(s) 328, 724, 922, 1191, 1231
AjuI GAANNNNNNNTTGG 2 cut(s) 377, 409
AleI CACNNNNGTG 1 cut(s) 1264
AluBI AGCT 5 cut(s) 734, 743, 904, 1009, 1076
AluI AGCT 5 cut(s) 734, 743, 904, 1009, 1076
Alw21I GWGCWC 3 cut(s) 455, 837, 1261
Alw26I GTCTC 5 cut(s) 343, 349, 394, 599, 1133
Alw44I GTGCAC 1 cut(s) 1257
AlwI GGATC 1 cut(s) 140
AlwNI CAGNNNCTG 2 cut(s) 758, 1108
Ama87I CYCGRG 1 cut(s) 1052
AoxI GGCC 5 cut(s) 262, 615, 925, 954, 989
ApaLI GTGCAC 1 cut(s) 1257
ApeKI GCWGC 4 cut(s) 20, 309, 571, 901
ApoI RAATTY 3 cut(s) 155, 800, 1031
AspLEI GCGC 1 cut(s) 207
AspS9I GGNCC 4 cut(s) 414, 548, 615, 622
AsuC2I CCSGG 2 cut(s) 197, 258
AsuHPI GGTGA 3 cut(s) 239, 740, 773
AvaI CYCGRG 1 cut(s) 1052
AvaII GGWCC 3 cut(s) 414, 548, 622
BaeGI GKGCMC 1 cut(s) 1261
BalI TGGCCA 2 cut(s) 264, 927
BarI GAAGNNNNNNTAC 2 cut(s) 86, 118
BbsI GAAGAC 1 cut(s) 405
Bbv12I GWGCWC 3 cut(s) 455, 837, 1261
BbvI GCAGC 4 cut(s) 32, 321, 583, 913
BccI CCATC 7 cut(s) 135, 280, 497, 617, 808, 887, 1093
BceAI ACGGC 1 cut(s) 941
BciT130I CCWGG 5 cut(s) 330, 726, 924, 1193, 1233
BclI TGATCA 1 cut(s) 217
BcnI CCSGG 2 cut(s) 197, 258
BcoDI GTCTC 5 cut(s) 343, 349, 394, 599, 1133
BfoI RGCGCY 1 cut(s) 208
BfuAI ACCTGC 1 cut(s) 1048
BisI GCNGC 5 cut(s) 21, 114, 310, 572, 902
BlsI GCNGC 5 cut(s) 22, 115, 311, 573, 903
BmcAI AGTACT 1 cut(s) 47
Bme1390I CCNGG 7 cut(s) 197, 258, 330, 726, 924, 1193, 1233
Bme18I GGWCC 3 cut(s) 414, 548, 622
BmeT110I CYCGRG 1 cut(s) 1052
BmgBI CACGTC 1 cut(s) 359
BmgT120I GGNCC 4 cut(s) 414, 548, 615, 622
BmiI GGNNCC 2 cut(s) 415, 487
BmrFI CCNGG 7 cut(s) 197, 258, 330, 726, 924, 1193, 1233
BmsI GCATC 2 cut(s) 844, 1103
BpiI GAAGAC 1 cut(s) 405
BpmI CTGGAG 2 cut(s) 504, 621
Bpu10I CCTNAGC 1 cut(s) 171
BpuMI CCSGG 2 cut(s) 197, 258
BsaI GGTCTC 2 cut(s) 394, 599
BsaJI CCNNGG 2 cut(s) 618, 922
BsaXI ACNNNNNCTCC 4 cut(s) 269, 299, 354, 384
Bsc4I CCNNNNNNNGG 4 cut(s) 137, 320, 335, 1057
Bse1I ACTGG 4 cut(s) 523, 604, 763, 871
Bse3DI GCAATG 2 cut(s) 448, 1259
BseBI CCWGG 5 cut(s) 330, 726, 924, 1193, 1233
BseDI CCNNGG 2 cut(s) 618, 922
BseGI GGATG 5 cut(s) 127, 793, 823, 898, 1132
BseLI CCNNNNNNNGG 4 cut(s) 137, 320, 335, 1057
BseMI GCAATG 2 cut(s) 448, 1259
BseMII CTCAG 4 cut(s) 185, 1037, 1038, 1115
BseNI ACTGG 4 cut(s) 523, 604, 763, 871
BseRI GAGGAG 6 cut(s) 24, 277, 1151, 1181, 1184, 1229
BseSI GKGCMC 1 cut(s) 1261
BseXI GCAGC 4 cut(s) 32, 321, 583, 913
BsgI GTGCAG 1 cut(s) 1260
BshFI GGCC 5 cut(s) 264, 617, 927, 956, 991
BsiHKAI GWGCWC 3 cut(s) 455, 837, 1261
BsiHKCI CYCGRG 1 cut(s) 1052
BsiSI CCGG 2 cut(s) 197, 257
BslFI GGGAC 1 cut(s) 427
BslI CCNNNNNNNGG 4 cut(s) 137, 320, 335, 1057
BsmAI GTCTC 5 cut(s) 343, 349, 394, 599, 1133
BsmBI CGTCTC 2 cut(s) 349, 1133
BsmFI GGGAC 1 cut(s) 427
BsmI GAATGC 1 cut(s) 255
BsnI GGCC 5 cut(s) 264, 617, 927, 956, 991
Bso31I GGTCTC 2 cut(s) 394, 599
BsoBI CYCGRG 1 cut(s) 1052
Bsp1286I GDGCHC 3 cut(s) 455, 837, 1261
Bsp1407I TGTACA 1 cut(s) 1011
Bsp143I GATC 5 cut(s) 145, 217, 714, 820, 1078
BspACI CCGC 3 cut(s) 114, 141, 625
BspANI GGCC 5 cut(s) 264, 617, 927, 956, 991
BspCNI CTCAG 4 cut(s) 184, 1037, 1038, 1114
BspHI TCATGA 1 cut(s) 996
BspLI GGNNCC 2 cut(s) 415, 487
BspMI ACCTGC 1 cut(s) 1048
BspPI GGATC 1 cut(s) 140
BspTNI GGTCTC 2 cut(s) 394, 599
BsrDI GCAATG 2 cut(s) 448, 1259
BsrGI TGTACA 1 cut(s) 1011
BsrI ACTGG 4 cut(s) 523, 604, 763, 871
BssECI CCNNGG 2 cut(s) 618, 922
BssMI GATC 5 cut(s) 145, 217, 714, 820, 1078
BssT1I CCWWGG 1 cut(s) 618
Bst2UI CCWGG 5 cut(s) 330, 726, 924, 1193, 1233
Bst4CI ACNGT 3 cut(s) 535, 567, 754
Bst6I CTCTTC 1 cut(s) 23
BstAUI TGTACA 1 cut(s) 1011
BstC8I GCNNGC 5 cut(s) 326, 576, 580, 899, 1007
BstDEI CTNAG 5 cut(s) 171, 188, 1024, 1046, 1101
BstENI CCTNNNNNAGG 1 cut(s) 1055
BstF5I GGATG 5 cut(s) 127, 793, 823, 898, 1132
BstH2I RGCGCY 1 cut(s) 208
BstHHI GCGC 1 cut(s) 207
BstKTI GATC 5 cut(s) 148, 220, 717, 823, 1081
BstMAI GTCTC 5 cut(s) 343, 349, 394, 599, 1133
BstMBI GATC 5 cut(s) 145, 217, 714, 820, 1078
BstMWI GCNNNNNNNGC 3 cut(s) 459, 740, 1073
BstNI CCWGG 5 cut(s) 330, 726, 924, 1193, 1233
BstNSI RCATGY 3 cut(s) 328, 578, 1231
BstSCI CCNGG 7 cut(s) 195, 256, 328, 724, 922, 1191, 1231
BstSLI GKGCMC 1 cut(s) 1261
BstV1I GCAGC 4 cut(s) 32, 321, 583, 913
BstV2I GAAGAC 1 cut(s) 405
BstX2I RGATCY 1 cut(s) 145
BstXI CCANNNNNNTGG 1 cut(s) 893
BstYI RGATCY 1 cut(s) 145
BsuRI GGCC 5 cut(s) 264, 617, 927, 956, 991
BtgZI GCGATG 1 cut(s) 597
BtrI CACGTC 1 cut(s) 359
BtsCI GGATG 5 cut(s) 127, 793, 823, 898, 1132
BtsIMutI CAGTG 3 cut(s) 531, 756, 1032
BveI ACCTGC 1 cut(s) 1048
Cac8I GCNNGC 5 cut(s) 326, 576, 580, 899, 1007
CaiI CAGNNNCTG 2 cut(s) 758, 1108
CciI TCATGA 1 cut(s) 996
CfoI GCGC 1 cut(s) 207
Cfr13I GGNCC 4 cut(s) 414, 548, 615, 622
Csp6I GTAC 5 cut(s) 46, 103, 597, 982, 1012
CviAII CATG 8 cut(s) 118, 266, 325, 575, 683, 997, 1162, 1228
CviQI GTAC 5 cut(s) 46, 103, 597, 982, 1012
DdeI CTNAG 5 cut(s) 171, 188, 1024, 1046, 1101
DpnI GATC 5 cut(s) 147, 219, 716, 822, 1080
DpnII GATC 5 cut(s) 145, 217, 714, 820, 1078
DraI TTTAAA 1 cut(s) 160
EaeI YGGCCR 2 cut(s) 262, 925
Eam1104I CTCTTC 1 cut(s) 23
EarI CTCTTC 1 cut(s) 23
EciI GGCGGA 1 cut(s) 156
Eco130I CCWWGG 1 cut(s) 618
Eco31I GGTCTC 2 cut(s) 394, 599
Eco47I GGWCC 3 cut(s) 414, 548, 622
Eco57I CTGAAG 2 cut(s) 105, 260
Eco88I CYCGRG 1 cut(s) 1052
EcoNI CCTNNNNNAGG 1 cut(s) 1055
EcoO109I RGGNCCY 1 cut(s) 414
EcoRI GAATTC 1 cut(s) 1031
EcoRII CCWGG 5 cut(s) 328, 724, 922, 1191, 1231
EcoT14I CCWWGG 1 cut(s) 618
ErhI CCWWGG 1 cut(s) 618
Esp3I CGTCTC 2 cut(s) 349, 1133
FaeI CATG 8 cut(s) 121, 269, 328, 578, 686, 1000, 1165, 1231
FalI AAGNNNNNCTT 2 cut(s) 1065, 1097
FaqI GGGAC 1 cut(s) 427
FatI CATG 8 cut(s) 117, 265, 324, 574, 682, 996, 1161, 1227
FauNDI CATATG 1 cut(s) 1210
FbaI TGATCA 1 cut(s) 217
Fnu4HI GCNGC 5 cut(s) 21, 114, 310, 572, 902
FokI GGATG 5 cut(s) 114, 780, 830, 905, 1139
Fsp4HI GCNGC 5 cut(s) 21, 114, 310, 572, 902
GlaI GCGC 1 cut(s) 206
GluI GCNGC 5 cut(s) 21, 114, 310, 572, 902
GsuI CTGGAG 2 cut(s) 504, 621
HaeII RGCGCY 1 cut(s) 208
HaeIII GGCC 5 cut(s) 264, 617, 927, 956, 991
HapII CCGG 2 cut(s) 197, 257
HhaI GCGC 1 cut(s) 207
Hin1II CATG 8 cut(s) 121, 269, 328, 578, 686, 1000, 1165, 1231
Hin6I GCGC 1 cut(s) 205
HinP1I GCGC 1 cut(s) 205
HinfI GANTC 3 cut(s) 55, 944, 1144
HpaII CCGG 2 cut(s) 197, 257
HphI GGTGA 3 cut(s) 239, 740, 773
Hpy166II GTNNAC 4 cut(s) 376, 632, 1159, 1259
Hpy188I TCNGA 4 cut(s) 277, 1047, 1104, 1204
Hpy188III TCNNGA 7 cut(s) 131, 149, 483, 659, 746, 805, 997
Hpy8I GTNNAC 4 cut(s) 376, 632, 1159, 1259
HpyAV CCTTC 9 cut(s) 91, 235, 239, 379, 520, 561, 685, 994, 1173
HpyCH4III ACNGT 3 cut(s) 535, 567, 754
HpyCH4IV ACGT 1 cut(s) 358
HpyCH4V TGCA 9 cut(s) 253, 462, 510, 571, 700, 1150, 1241, 1252, 1259
HpyF10VI GCNNNNNNNGC 3 cut(s) 459, 740, 1073
HpyF3I CTNAG 5 cut(s) 171, 188, 1024, 1046, 1101
HpySE526I ACGT 1 cut(s) 358
Hsp92II CATG 8 cut(s) 121, 269, 328, 578, 686, 1000, 1165, 1231
HspAI GCGC 1 cut(s) 205
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 5 cut(s) 145, 217, 714, 820, 1078
LmnI GCTCC 4 cut(s) 458, 485, 748, 832
Lsp1109I GCAGC 4 cut(s) 32, 321, 583, 913
LweI GCATC 2 cut(s) 844, 1103
MaeII ACGT 1 cut(s) 358
MaeIII GTNAC 4 cut(s) 191, 529, 754, 843
MalI GATC 5 cut(s) 147, 219, 716, 822, 1080
MboI GATC 5 cut(s) 145, 217, 714, 820, 1078
MflI RGATCY 1 cut(s) 145
MhlI GDGCHC 3 cut(s) 455, 837, 1261
MlsI TGGCCA 2 cut(s) 264, 927
MluCI AATT 3 cut(s) 155, 800, 1031
MluNI TGGCCA 2 cut(s) 264, 927
MlyI GAGTC 2 cut(s) 938, 1138
MmeI TCCRAC 1 cut(s) 1104
Mox20I TGGCCA 2 cut(s) 264, 927
MscI TGGCCA 2 cut(s) 264, 927
MseI TTAA 2 cut(s) 159, 951
MslI CAYNNNNRTG 2 cut(s) 891, 1264
Msp20I TGGCCA 2 cut(s) 264, 927
MspA1I CMGCKG 1 cut(s) 627
MspI CCGG 2 cut(s) 197, 257
MspR9I CCNGG 7 cut(s) 197, 258, 330, 726, 924, 1193, 1233
Mva1269I GAATGC 1 cut(s) 255
MvaI CCWGG 5 cut(s) 330, 726, 924, 1193, 1233
MwoI GCNNNNNNNGC 3 cut(s) 459, 740, 1073
NciI CCSGG 2 cut(s) 197, 258
NdeI CATATG 1 cut(s) 1210
NdeII GATC 5 cut(s) 145, 217, 714, 820, 1078
NlaIII CATG 8 cut(s) 121, 269, 328, 578, 686, 1000, 1165, 1231
NlaIV GGNNCC 2 cut(s) 415, 487
NmuCI GTSAC 4 cut(s) 191, 529, 754, 843
NspI RCATGY 3 cut(s) 328, 578, 1231
OliI CACNNNNGTG 1 cut(s) 1264
PaeI GCATGC 2 cut(s) 328, 578
PaeR7I CTCGAG 1 cut(s) 1052
PagI TCATGA 1 cut(s) 996
PctI GAATGC 1 cut(s) 255
PfeI GAWTC 1 cut(s) 55
PflFI GACNNNGTC 1 cut(s) 752
PflMI CCANNNNNTGG 1 cut(s) 335
PkrI GCNGC 5 cut(s) 22, 115, 311, 573, 903
PleI GAGTC 2 cut(s) 938, 1138
PpsI GAGTC 2 cut(s) 938, 1138
PpuMI RGGWCCY 1 cut(s) 414
Psp5II RGGWCCY 1 cut(s) 414
Psp6I CCWGG 5 cut(s) 328, 724, 922, 1191, 1231
PspGI CCWGG 5 cut(s) 328, 724, 922, 1191, 1231
PspN4I GGNNCC 2 cut(s) 415, 487
PspPI GGNCC 4 cut(s) 414, 548, 615, 622
PspPPI RGGWCCY 1 cut(s) 414
PspXI VCTCGAGB 1 cut(s) 1052
PstNI CAGNNNCTG 2 cut(s) 758, 1108
PsuI RGATCY 1 cut(s) 145
PsyI GACNNNGTC 1 cut(s) 752
RsaI GTAC 5 cut(s) 47, 104, 598, 983, 1013
RsaNI GTAC 5 cut(s) 46, 103, 597, 982, 1012
RseI CAYNNNNRTG 2 cut(s) 891, 1264
SaqAI TTAA 2 cut(s) 159, 951
SatI GCNGC 5 cut(s) 21, 114, 310, 572, 902
Sau3AI GATC 5 cut(s) 145, 217, 714, 820, 1078
Sau96I GGNCC 4 cut(s) 414, 548, 615, 622
ScaI AGTACT 1 cut(s) 47
SchI GAGTC 2 cut(s) 938, 1138
ScrFI CCNGG 7 cut(s) 197, 258, 330, 726, 924, 1193, 1233
SduI GDGCHC 3 cut(s) 455, 837, 1261
SfaNI GCATC 2 cut(s) 844, 1103
Sfr274I CTCGAG 1 cut(s) 1052
SinI GGWCC 3 cut(s) 414, 548, 622
SlaI CTCGAG 1 cut(s) 1052
SmiMI CAYNNNNRTG 2 cut(s) 891, 1264
SmlI CTYRAG 1 cut(s) 1052
SmoI CTYRAG 1 cut(s) 1052
SphI GCATGC 2 cut(s) 328, 578
Sse9I AATT 3 cut(s) 155, 800, 1031
SsiI CCGC 3 cut(s) 114, 141, 625
StyD4I CCNGG 7 cut(s) 195, 256, 328, 724, 922, 1191, 1231
StyI CCWWGG 1 cut(s) 618
TaaI ACNGT 3 cut(s) 535, 567, 754
TaiI ACGT 1 cut(s) 361
TaqI TCGA 2 cut(s) 491, 1053
TasI AATT 3 cut(s) 155, 800, 1031
TatI WGTACW 2 cut(s) 45, 1011
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 1 cut(s) 55
Tru1I TTAA 2 cut(s) 159, 951
Tru9I TTAA 2 cut(s) 159, 951
TscAI CASTG 3 cut(s) 538, 763, 1032
TseFI GTSAC 4 cut(s) 191, 529, 754, 843
TseI GCWGC 4 cut(s) 20, 309, 571, 901
Tsp45I GTSAC 4 cut(s) 191, 529, 754, 843
TspDTI ATGAA 6 cut(s) 134, 539, 753, 985, 1007, 1013
TspGWI ACGGA 3 cut(s) 249, 361, 1133
TspRI CASTG 3 cut(s) 538, 763, 1032
Tth111I GACNNNGTC 1 cut(s) 752
Van91I CCANNNNNTGG 1 cut(s) 335
VneI GTGCAC 1 cut(s) 1257
VpaK11BI GGWCC 3 cut(s) 414, 548, 622
XagI CCTNNNNNAGG 1 cut(s) 1055
XapI RAATTY 3 cut(s) 155, 800, 1031
XceI RCATGY 3 cut(s) 328, 578, 1231
XhoI CTCGAG 1 cut(s) 1052
ZrmI AGTACT 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.