MD03G1159100.v1.1

DnaJ protein homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000572
Physical Location & Seq
Forward (+)
18889773 .. 18892254
2482 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1159100.v1.1.491

Sequence Viewer

Length: 1263 bp
ATGTTTGGGAGGGCGCCGAAGAAGAGCGATAACACTCGGTACTATGAGATTTTGGGAGTTTCGCAGAGTGCTTCTTCCGACGATTTGAAGAAGGCGTATAAGAAAGCCGCCATAAAAAACCACCCTGATAAGGGTGGAGATCCTGAGAAATTTAAAGAGTTGGCTCACGCTTATGAGATTTTGAGTGACCCTGAGAAGCGTGAAATCTACGATCAGTATGGTGAGGATGCACTCAAGGAGGGAATGGGGGGTGGAGGTGGTGGCGGCCACGACCCATTCGACATCTTCTCATCTTTCTTTGGTGGAAGCCCATTTGGAGGTGGTGGTAGTAGCCGAGGACGAAGACAGAGACGTGGAGAAGATGTTGTCCACGCACTCAAGGTTTCTTTGGAGGACCTCTATCTTGGGACCTCGAAGAAGCTATCTTTATCGCGTAATGTGCTTTGCTCCAAGTGTAATGGGAAGGGTTCGAAATCTGGGGCTTCATTGAAGTGTTCTGGCTGTCAAGGAACTGGTATGAAGGTCTCAATTAGGCACCTGGGCCCGTCTATGATTCAACAGATGCAGCATGCTTGCAATGAGTGTAAGGGTACTGGAGAGACCATTAGTGACCGAGACCGCTGTACTCAGTGCAAGGGGGAGAAGGTTGTTCAAGAGAAGAAGGTGTTGGAAGTCCATGTGGAGAAAGGCATGCAGAATGGACAGAAGATCACATTCCCTGGTGAAGCAGATGAAGCTCCTGAGACAGTCACTGGTGATATAGTGTTTGTCATTCAGCAAAAAGAACATCCAAAGTTCAAGAGAAAGGGTGAGGACCTTTTCGTCGAGCACACTCTGCCTCTAACTGAGGCTCTATGTGGCTTCCAGTTTGTGTTGACCCATTTGGATGGCAGGCAGCTGCTTATAAAATCAAACCCTGGTGAAGTTGTCAAGCCTGATTCGTTCAAGGCGATCAATGACGAGGGTATGCCCATGTATCAGAGGCCATTCATGAAGGGGAAGCTGTACATTCACTTCAATGTGGAATTCCCAGAGTCTCTCAACCCTGAGCAAGTCAAGGCCTTGGAAGCTGCTCTTCCAGGCAAGCCATCAGCATCTCAGCTCACGGATATGGAGGTGGACGAGTGTGAGGAGACGACTCTGCACGATGTGAACATGGAGGAGGAGATGAGGAGGAAGCAGCTGCAGGCTCAGCAAGAGGCCTATGATGAGGACGATGACATGCCTGGTGGTGCTCAGAGGGTGCAGTGCGCCCAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

421

Amino Acids

46.41

Weight (kDa)

5.91

Isoelectric Point (pI)

39.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 14 - 71 2.1e-22 DnaJ domain
DnaJ_C PF01556 123 - 344 3.4e-37 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 149 - 215 9.3e-15 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000572)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44110 AT3G44110 AT5G22060
fragaria_vesca FvH4_3g26170 FvH4_3g26170 FvH4_3g26170 FvH4_3g26220 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270
malus_domestica MD02G1258400.v1.1 MD03G1159100.v1.1 MD07G1062300.v1.1 MD11G1174700.v1.1
prunus_persica Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.6G146900_v2.0.a1 Prupe.6G146900_v2.0.a1
pyrus_communis pycom02g21960 pycom03g11140 pycom07g04780 pycom11g14940
rosa_chinensis RchiOBHm_Chr1g0332041 RchiOBHm_Chr1g0364381 RchiOBHm_Chr4g0428981 RchiOBHm_Chr5g0049001 RchiOBHm_Chr5g0049021
rosa_laevigata RLG00000007108 RLG00000013380 RLG00000027486 RLG00000029697 RLG00000034581 RLG00000034584
rosa_multiflora Rmu_co8449175.1_g000001 Rmu_sc0000441.1_g000032 Rmu_sc0000530.1_g000003 Rmu_sc0003358.1_g000010 Rmu_sc0004058.1_g000007 Rmu_sc0004522.1_g000007 Rmu_sc0008629.1_g000009 Rmu_sc0009489.1_g000007 Rmu_sc0014815.1_g000013
rosa_roxburghii Rroxscaffold_1G00032850 Rroxscaffold_1G00032870 Rroxscaffold_4G00292340 Rroxscaffold_4G00318430 Rroxscaffold_5G00370640
rosa_rugosa Rorug01G0097800 Rorug01G0097900 Rorug01G0098000 Rorug01G0315800 Rorug04G0231300 Rorug05G0241800 Rorug05G0241900 Rorug05G0242000 Rorug05G0242100.1 Rorug05G0242200 Rorug05G0242300 Rorug06G0102700 Rorug06G0102800
rosa_samantha Rh1AG121800 Rh1BG093200 Rh1CG303100 Rh1DG127500 Rh4BG293700 Rh4DG290600 Rh5AG322000 Rh5CG357500 Rh5CG357600 Rh5DG344100 Rh6BG218000
rosa_wichuraiana Rw0G008830 Rw1G009930 Rw1G028700 Rw5G030390 Rw5G030400 Rw6G018630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 905
AasI GACNNNNNNGTC 1 cut(s) 821
AccB1I GGYRCC 2 cut(s) 13, 534
AccII CGCG 1 cut(s) 433
AciI CCGC 3 cut(s) 108, 264, 619
AclWI GGATC 1 cut(s) 134
AcoI YGGCCR 1 cut(s) 265
AcsI RAATTY 2 cut(s) 149, 1025
AcyI GRCGYC 1 cut(s) 14
AdeI CACNNNGTG 1 cut(s) 1150
AfaI GTAC 4 cut(s) 41, 592, 625, 1007
AfiI CCNNNNNNNGG 3 cut(s) 130, 131, 317
AgsI TTSAA 7 cut(s) 88, 490, 557, 653, 799, 946, 1018
AjiI CACGTC 1 cut(s) 353
AjnI CCWGG 5 cut(s) 537, 718, 916, 1078, 1225
AjuI GAANNNNNNNTTGG 2 cut(s) 650, 682
AluBI AGCT 7 cut(s) 421, 737, 898, 1003, 1070, 1102, 1183
AluI AGCT 7 cut(s) 421, 737, 898, 1003, 1070, 1102, 1183
Alw21I GWGCWC 2 cut(s) 831, 1237
Alw26I GTCTC 7 cut(s) 343, 529, 593, 609, 737, 1041, 1127
AlwI GGATC 1 cut(s) 134
AlwNI CAGNNNCTG 1 cut(s) 752
AoxI GGCC 5 cut(s) 265, 541, 983, 1059, 1200
ApaI GGGCCC 1 cut(s) 545
ApeKI GCWGC 6 cut(s) 565, 895, 898, 1070, 1180, 1183
ApoI RAATTY 2 cut(s) 149, 1025
AspLEI GCGC 2 cut(s) 16, 1253
AspS9I GGNCC 5 cut(s) 394, 408, 541, 542, 814
AsuHPI GGTGA 5 cut(s) 233, 734, 767, 821, 932
AsuII TTCGAA 1 cut(s) 470
AvaII GGWCC 3 cut(s) 394, 408, 814
BaeGI GKGCMC 1 cut(s) 545
BanI GGYRCC 2 cut(s) 13, 534
BanII GRGCYC 1 cut(s) 545
BarI GAAGNNNNNNTAC 2 cut(s) 998, 1030
BbsI GAAGAC 1 cut(s) 349
Bbv12I GWGCWC 2 cut(s) 831, 1237
BbvI GCAGC 6 cut(s) 577, 885, 907, 1057, 1170, 1192
BccI CCATC 2 cut(s) 881, 1096
BciT130I CCWGG 5 cut(s) 539, 720, 918, 1080, 1227
BcoDI GTCTC 7 cut(s) 343, 529, 593, 609, 737, 1041, 1127
BfmI CTRYAG 1 cut(s) 1184
BfoI RGCGCY 1 cut(s) 17
BisI GCNGC 8 cut(s) 108, 265, 566, 896, 899, 1071, 1181, 1184
BlpI GCTNAGC 1 cut(s) 1191
BlsI GCNGC 8 cut(s) 109, 266, 567, 897, 900, 1072, 1182, 1185
Bme1390I CCNGG 5 cut(s) 539, 720, 918, 1080, 1227
Bme18I GGWCC 3 cut(s) 394, 408, 814
BmgBI CACGTC 1 cut(s) 353
BmgT120I GGNCC 5 cut(s) 394, 408, 541, 542, 814
BmiI GGNNCC 4 cut(s) 15, 409, 536, 543
BmrFI CCNGG 5 cut(s) 539, 720, 918, 1080, 1227
BmsI GCATC 3 cut(s) 217, 552, 1103
BpiI GAAGAC 1 cut(s) 349
BpmI CTGGAG 1 cut(s) 615
Bpu10I CCTNAGC 1 cut(s) 1047
Bpu1102I GCTNAGC 1 cut(s) 1191
Bpu14I TTCGAA 1 cut(s) 470
BpuEI CTTGAG 2 cut(s) 218, 362
BsaHI GRCGYC 1 cut(s) 14
BsaI GGTCTC 3 cut(s) 529, 593, 609
BsaJI CCNNGG 5 cut(s) 334, 538, 718, 916, 1062
BsaXI ACNNNNNCTCC 2 cut(s) 348, 378
Bsc4I CCNNNNNNNGG 3 cut(s) 130, 131, 317
Bse1I ACTGG 4 cut(s) 517, 598, 757, 865
Bse3DI GCAATG 1 cut(s) 583
BseBI CCWGG 5 cut(s) 539, 720, 918, 1080, 1227
BseDI CCNNGG 5 cut(s) 334, 538, 718, 916, 1062
BseGI GGATG 3 cut(s) 232, 787, 892
BseLI CCNNNNNNNGG 3 cut(s) 130, 131, 317
BseMI GCAATG 1 cut(s) 583
BseMII CTCAG 9 cut(s) 135, 183, 641, 732, 837, 1038, 1112, 1205, 1250
BseNI ACTGG 4 cut(s) 517, 598, 757, 865
BseRI GAGGAG 4 cut(s) 1145, 1175, 1178, 1186
BseSI GKGCMC 1 cut(s) 545
BseXI GCAGC 6 cut(s) 577, 885, 907, 1057, 1170, 1192
BseYI CCCAGC 1 cut(s) 1254
BsgI GTGCAG 1 cut(s) 1127
Bsh1236I CGCG 1 cut(s) 433
BshFI GGCC 5 cut(s) 267, 543, 985, 1061, 1202
BshNI GGYRCC 2 cut(s) 13, 534
BsiHKAI GWGCWC 2 cut(s) 831, 1237
BslFI GGGAC 1 cut(s) 421
BslI CCNNNNNNNGG 3 cut(s) 130, 131, 317
BsmAI GTCTC 7 cut(s) 343, 529, 593, 609, 737, 1041, 1127
BsmBI CGTCTC 2 cut(s) 343, 1127
BsmFI GGGAC 1 cut(s) 421
BsnI GGCC 5 cut(s) 267, 543, 985, 1061, 1202
Bso31I GGTCTC 3 cut(s) 529, 593, 609
Bsp119I TTCGAA 1 cut(s) 470
Bsp120I GGGCCC 1 cut(s) 541
Bsp1286I GDGCHC 3 cut(s) 545, 831, 1237
Bsp1407I TGTACA 1 cut(s) 1005
Bsp143I GATC 4 cut(s) 139, 211, 708, 951
Bsp1720I GCTNAGC 1 cut(s) 1191
BspACI CCGC 3 cut(s) 108, 264, 619
BspANI GGCC 5 cut(s) 267, 543, 985, 1061, 1202
BspCNI CTCAG 9 cut(s) 136, 184, 640, 733, 838, 1039, 1111, 1204, 1249
BspFNI CGCG 1 cut(s) 433
BspHI TCATGA 1 cut(s) 990
BspLI GGNNCC 4 cut(s) 15, 409, 536, 543
BspMAI CTGCAG 1 cut(s) 1188
BspPI GGATC 1 cut(s) 134
BspQI GCTCTTC 2 cut(s) 17, 1080
BspT104I TTCGAA 1 cut(s) 470
BspT107I GGYRCC 2 cut(s) 13, 534
BspTNI GGTCTC 3 cut(s) 529, 593, 609
BsrDI GCAATG 1 cut(s) 583
BsrGI TGTACA 1 cut(s) 1005
BsrI ACTGG 4 cut(s) 517, 598, 757, 865
BssECI CCNNGG 5 cut(s) 334, 538, 718, 916, 1062
BssMI GATC 4 cut(s) 139, 211, 708, 951
BssNI GRCGYC 1 cut(s) 14
BssT1I CCWWGG 1 cut(s) 1062
Bst2UI CCWGG 5 cut(s) 539, 720, 918, 1080, 1227
Bst4CI ACNGT 1 cut(s) 748
Bst6I CTCTTC 2 cut(s) 17, 1080
BstACI GRCGYC 1 cut(s) 14
BstAPI GCANNNNNTGC 1 cut(s) 835
BstAUI TGTACA 1 cut(s) 1005
BstBI TTCGAA 1 cut(s) 470
BstC8I GCNNGC 6 cut(s) 570, 574, 692, 893, 1085, 1188
BstDEI CTNAG 9 cut(s) 144, 192, 627, 741, 846, 1047, 1098, 1191, 1236
BstF5I GGATG 3 cut(s) 232, 787, 892
BstFNI CGCG 1 cut(s) 433
BstH2I RGCGCY 1 cut(s) 17
BstHHI GCGC 2 cut(s) 16, 1253
BstKTI GATC 4 cut(s) 142, 214, 711, 954
BstMAI GTCTC 7 cut(s) 343, 529, 593, 609, 737, 1041, 1127
BstMBI GATC 4 cut(s) 139, 211, 708, 951
BstMWI GCNNNNNNNGC 5 cut(s) 439, 734, 835, 1067, 1192
BstNI CCWGG 5 cut(s) 539, 720, 918, 1080, 1227
BstNSI RCATGY 3 cut(s) 572, 694, 1225
BstSCI CCNGG 5 cut(s) 537, 718, 916, 1078, 1225
BstSFI CTRYAG 1 cut(s) 1184
BstSLI GKGCMC 1 cut(s) 545
BstUI CGCG 1 cut(s) 433
BstV1I GCAGC 6 cut(s) 577, 885, 907, 1057, 1170, 1192
BstV2I GAAGAC 1 cut(s) 349
BstX2I RGATCY 1 cut(s) 139
BstXI CCANNNNNNTGG 1 cut(s) 887
BstYI RGATCY 1 cut(s) 139
BsuRI GGCC 5 cut(s) 267, 543, 985, 1061, 1202
BtrI CACGTC 1 cut(s) 353
BtsCI GGATG 3 cut(s) 232, 787, 892
BtsI GCAGTG 1 cut(s) 1253
BtsIMutI CAGTG 3 cut(s) 635, 750, 1253
Cac8I GCNNGC 6 cut(s) 570, 574, 692, 893, 1085, 1188
CaiI CAGNNNCTG 1 cut(s) 752
CciI TCATGA 1 cut(s) 990
CfoI GCGC 2 cut(s) 16, 1253
Cfr13I GGNCC 5 cut(s) 394, 408, 541, 542, 814
Csp6I GTAC 4 cut(s) 40, 591, 624, 1006
CviAII CATG 7 cut(s) 569, 677, 691, 973, 991, 1156, 1222
CviQI GTAC 4 cut(s) 40, 591, 624, 1006
DdeI CTNAG 9 cut(s) 144, 192, 627, 741, 846, 1047, 1098, 1191, 1236
DinI GGCGCC 1 cut(s) 15
DpnI GATC 4 cut(s) 141, 213, 710, 953
DpnII GATC 4 cut(s) 139, 211, 708, 951
DraI TTTAAA 1 cut(s) 154
DraIII CACNNNGTG 1 cut(s) 1150
DrdI GACNNNNNNGTC 1 cut(s) 821
DseDI GACNNNNNNGTC 1 cut(s) 821
EaeI YGGCCR 1 cut(s) 265
Eam1104I CTCTTC 2 cut(s) 17, 1080
EarI CTCTTC 2 cut(s) 17, 1080
Eco130I CCWWGG 1 cut(s) 1062
Eco147I AGGCCT 2 cut(s) 1061, 1202
Eco24I GRGCYC 1 cut(s) 545
Eco31I GGTCTC 3 cut(s) 529, 593, 609
Eco47I GGWCC 3 cut(s) 394, 408, 814
EcoO109I RGGNCCY 3 cut(s) 394, 408, 814
EcoRI GAATTC 1 cut(s) 1025
EcoRII CCWGG 5 cut(s) 537, 718, 916, 1078, 1225
EcoT14I CCWWGG 1 cut(s) 1062
EcoT38I GRGCYC 1 cut(s) 545
EgeI GGCGCC 1 cut(s) 15
EheI GGCGCC 1 cut(s) 15
ErhI CCWWGG 1 cut(s) 1062
Esp3I CGTCTC 2 cut(s) 343, 1127
FaeI CATG 7 cut(s) 572, 680, 694, 976, 994, 1159, 1225
FalI AAGNNNNNCTT 2 cut(s) 1059, 1091
FaqI GGGAC 1 cut(s) 421
FatI CATG 7 cut(s) 568, 676, 690, 972, 990, 1155, 1221
Fnu4HI GCNGC 8 cut(s) 108, 265, 566, 896, 899, 1071, 1181, 1184
FokI GGATG 3 cut(s) 239, 774, 899
FriOI GRGCYC 1 cut(s) 545
Fsp4HI GCNGC 8 cut(s) 108, 265, 566, 896, 899, 1071, 1181, 1184
GlaI GCGC 2 cut(s) 15, 1252
GluI GCNGC 8 cut(s) 108, 265, 566, 896, 899, 1071, 1181, 1184
GsaI CCCAGC 1 cut(s) 1258
GsuI CTGGAG 1 cut(s) 615
HaeII RGCGCY 1 cut(s) 17
HaeIII GGCC 5 cut(s) 267, 543, 985, 1061, 1202
HhaI GCGC 2 cut(s) 16, 1253
Hin1I GRCGYC 1 cut(s) 14
Hin1II CATG 7 cut(s) 572, 680, 694, 976, 994, 1159, 1225
Hin6I GCGC 2 cut(s) 14, 1251
HinP1I GCGC 2 cut(s) 14, 1251
HincII GTYRAC 1 cut(s) 876
HindII GTYRAC 1 cut(s) 876
HinfI GANTC 4 cut(s) 553, 938, 1034, 1138
HphI GGTGA 5 cut(s) 233, 734, 767, 821, 932
Hpy166II GTNNAC 4 cut(s) 370, 876, 1120, 1153
Hpy188I TCNGA 3 cut(s) 79, 981, 1239
Hpy188III TCNNGA 5 cut(s) 143, 653, 740, 799, 991
Hpy8I GTNNAC 4 cut(s) 370, 876, 1120, 1153
Hpy99I CGWCG 2 cut(s) 83, 827
HpyAV CCTTC 6 cut(s) 85, 457, 514, 637, 655, 988
HpyCH4III ACNGT 1 cut(s) 748
HpyCH4IV ACGT 1 cut(s) 352
HpyCH4V TGCA 8 cut(s) 230, 565, 576, 633, 694, 1144, 1186, 1246
HpyF10VI GCNNNNNNNGC 5 cut(s) 439, 734, 835, 1067, 1192
HpyF3I CTNAG 9 cut(s) 144, 192, 627, 741, 846, 1047, 1098, 1191, 1236
HpySE526I ACGT 1 cut(s) 352
Hsp92I GRCGYC 1 cut(s) 14
Hsp92II CATG 7 cut(s) 572, 680, 694, 976, 994, 1159, 1225
HspAI GCGC 2 cut(s) 14, 1251
KasI GGCGCC 1 cut(s) 13
Kzo9I GATC 4 cut(s) 139, 211, 708, 951
LguI GCTCTTC 2 cut(s) 17, 1080
LmnI GCTCC 2 cut(s) 452, 742
Lsp1109I GCAGC 6 cut(s) 577, 885, 907, 1057, 1170, 1192
LweI GCATC 3 cut(s) 217, 552, 1103
MaeII ACGT 1 cut(s) 352
MaeIII GTNAC 3 cut(s) 185, 608, 748
MalI GATC 4 cut(s) 141, 213, 710, 953
MboI GATC 4 cut(s) 139, 211, 708, 951
MflI RGATCY 1 cut(s) 139
MhlI GDGCHC 3 cut(s) 545, 831, 1237
MluCI AATT 3 cut(s) 149, 528, 1025
Mly113I GGCGCC 1 cut(s) 14
MlyI GAGTC 2 cut(s) 1043, 1132
MmeI TCCRAC 2 cut(s) 102, 648
MseI TTAA 1 cut(s) 153
MslI CAYNNNNRTG 5 cut(s) 171, 490, 885, 1017, 1109
MspA1I CMGCKG 3 cut(s) 621, 898, 1183
MspR9I CCNGG 5 cut(s) 539, 720, 918, 1080, 1227
MvaI CCWGG 5 cut(s) 539, 720, 918, 1080, 1227
MvnI CGCG 1 cut(s) 433
MwoI GCNNNNNNNGC 5 cut(s) 439, 734, 835, 1067, 1192
NarI GGCGCC 1 cut(s) 14
NdeII GATC 4 cut(s) 139, 211, 708, 951
NlaIII CATG 7 cut(s) 572, 680, 694, 976, 994, 1159, 1225
NlaIV GGNNCC 4 cut(s) 15, 409, 536, 543
NmeAIII GCCGAG 1 cut(s) 359
NmuCI GTSAC 3 cut(s) 185, 608, 748
NspI RCATGY 3 cut(s) 572, 694, 1225
NspV TTCGAA 1 cut(s) 470
PaeI GCATGC 2 cut(s) 572, 694
PagI TCATGA 1 cut(s) 990
PceI AGGCCT 2 cut(s) 1061, 1202
PciSI GCTCTTC 2 cut(s) 17, 1080
PcsI WCGNNNNNNNCGW 2 cut(s) 276, 947
PfeI GAWTC 2 cut(s) 553, 938
PkrI GCNGC 8 cut(s) 109, 266, 567, 897, 900, 1072, 1182, 1185
PleI GAGTC 2 cut(s) 1042, 1132
PluTI GGCGCC 1 cut(s) 17
PpsI GAGTC 2 cut(s) 1042, 1132
PpuMI RGGWCCY 3 cut(s) 394, 408, 814
PsiI TTATAA 1 cut(s) 905
Psp5II RGGWCCY 3 cut(s) 394, 408, 814
Psp6I CCWGG 5 cut(s) 537, 718, 916, 1078, 1225
PspFI CCCAGC 1 cut(s) 1254
PspGI CCWGG 5 cut(s) 537, 718, 916, 1078, 1225
PspN4I GGNNCC 4 cut(s) 15, 409, 536, 543
PspOMI GGGCCC 1 cut(s) 541
PspPI GGNCC 5 cut(s) 394, 408, 541, 542, 814
PspPPI RGGWCCY 3 cut(s) 394, 408, 814
PstI CTGCAG 1 cut(s) 1188
PstNI CAGNNNCTG 1 cut(s) 752
PsuI RGATCY 1 cut(s) 139
PvuII CAGCTG 2 cut(s) 898, 1183
RsaI GTAC 4 cut(s) 41, 592, 625, 1007
RsaNI GTAC 4 cut(s) 40, 591, 624, 1006
RseI CAYNNNNRTG 5 cut(s) 171, 490, 885, 1017, 1109
SapI GCTCTTC 2 cut(s) 17, 1080
SaqAI TTAA 1 cut(s) 153
SatI GCNGC 8 cut(s) 108, 265, 566, 896, 899, 1071, 1181, 1184
Sau3AI GATC 4 cut(s) 139, 211, 708, 951
Sau96I GGNCC 5 cut(s) 394, 408, 541, 542, 814
SchI GAGTC 2 cut(s) 1043, 1132
ScrFI CCNGG 5 cut(s) 539, 720, 918, 1080, 1227
SduI GDGCHC 3 cut(s) 545, 831, 1237
SfaNI GCATC 3 cut(s) 217, 552, 1103
SfcI CTRYAG 1 cut(s) 1184
SfoI GGCGCC 1 cut(s) 15
SfuI TTCGAA 1 cut(s) 470
SinI GGWCC 3 cut(s) 394, 408, 814
SmiMI CAYNNNNRTG 5 cut(s) 171, 490, 885, 1017, 1109
SmlI CTYRAG 2 cut(s) 233, 377
SmoI CTYRAG 2 cut(s) 233, 377
SphI GCATGC 2 cut(s) 572, 694
Sse9I AATT 3 cut(s) 149, 528, 1025
SseBI AGGCCT 2 cut(s) 1061, 1202
SsiI CCGC 3 cut(s) 108, 264, 619
SspDI GGCGCC 1 cut(s) 13
StuI AGGCCT 2 cut(s) 1061, 1202
StyD4I CCNGG 5 cut(s) 537, 718, 916, 1078, 1225
StyI CCWWGG 1 cut(s) 1062
TaaI ACNGT 1 cut(s) 748
TaiI ACGT 1 cut(s) 355
TaqI TCGA 4 cut(s) 279, 413, 470, 825
TaqII GACCGA 1 cut(s) 627
TasI AATT 3 cut(s) 149, 528, 1025
TatI WGTACW 2 cut(s) 623, 1005
TauI GCSGC 2 cut(s) 110, 267
TfiI GAWTC 2 cut(s) 553, 938
Tru1I TTAA 1 cut(s) 153
Tru9I TTAA 1 cut(s) 153
TscAI CASTG 3 cut(s) 635, 757, 1253
TseFI GTSAC 3 cut(s) 185, 608, 748
TseI GCWGC 6 cut(s) 565, 895, 898, 1070, 1180, 1183
Tsp45I GTSAC 3 cut(s) 185, 608, 748
TspDTI ATGAA 5 cut(s) 474, 533, 747, 979, 1007
TspGWI ACGGA 1 cut(s) 1121
TspRI CASTG 3 cut(s) 635, 757, 1253
VpaK11BI GGWCC 3 cut(s) 394, 408, 814
XapI RAATTY 2 cut(s) 149, 1025
XceI RCATGY 3 cut(s) 572, 694, 1225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.