DnaJ protein homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 622, 1185 |
| AccB1I | GGYRCC | 1 cut(s) | 1223 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 314 |
| AccII | CGCG | 1 cut(s) | 430 |
| AccIII | TCCGGA | 1 cut(s) | 190 |
| AciI | CCGC | 5 cut(s) | 69, 108, 135, 252, 261 |
| AclWI | GGATC | 5 cut(s) | 43, 134, 182, 544, 621 |
| AcoI | YGGCCR | 1 cut(s) | 262 |
| AcuI | CTGAAG | 1 cut(s) | 107 |
| AdeI | CACNNNGTG | 1 cut(s) | 854 |
| AfaI | GTAC | 3 cut(s) | 41, 589, 974 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 130, 131, 314 |
| AflII | CTTAAG | 1 cut(s) | 374 |
| AflIII | ACRYGT | 1 cut(s) | 488 |
| AgsI | TTSAA | 6 cut(s) | 63, 483, 824, 863, 943, 1238 |
| AjnI | CCWGG | 5 cut(s) | 493, 715, 913, 1059, 1079 |
| AluBI | AGCT | 3 cut(s) | 14, 418, 725 |
| AluI | AGCT | 3 cut(s) | 14, 418, 725 |
| Alw21I | GWGCWC | 3 cut(s) | 16, 786, 1246 |
| Alw26I | GTCTC | 3 cut(s) | 590, 1058, 1121 |
| AlwI | GGATC | 5 cut(s) | 43, 134, 182, 544, 621 |
| Aor13HI | TCCGGA | 1 cut(s) | 190 |
| AoxI | GGCC | 4 cut(s) | 262, 538, 980, 1056 |
| ApeKI | GCWGC | 4 cut(s) | 327, 498, 618, 1135 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 803, 835 |
| AseI | ATTAAT | 1 cut(s) | 603 |
| AspLEI | GCGC | 4 cut(s) | 432, 623, 736, 1186 |
| AspS9I | GGNCC | 2 cut(s) | 539, 1057 |
| AsuHPI | GGTGA | 4 cut(s) | 647, 731, 764, 818 |
| BaeGI | GKGCMC | 1 cut(s) | 1228 |
| BanI | GGYRCC | 1 cut(s) | 1223 |
| BanII | GRGCYC | 1 cut(s) | 16 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 80, 112 |
| BbsI | GAAGAC | 1 cut(s) | 895 |
| Bbv12I | GWGCWC | 3 cut(s) | 16, 786, 1246 |
| BbvI | GCAGC | 4 cut(s) | 339, 485, 605, 1122 |
| BccI | CCATC | 3 cut(s) | 119, 375, 878 |
| BciT130I | CCWGG | 5 cut(s) | 495, 717, 915, 1061, 1081 |
| BclI | TGATCA | 1 cut(s) | 934 |
| BcoDI | GTCTC | 3 cut(s) | 590, 1058, 1121 |
| BfoI | RGCGCY | 1 cut(s) | 737 |
| BfrI | CTTAAG | 1 cut(s) | 374 |
| BglII | AGATCT | 2 cut(s) | 204, 391 |
| BisI | GCNGC | 7 cut(s) | 108, 136, 262, 328, 499, 619, 1136 |
| BlpI | GCTNAGC | 1 cut(s) | 1245 |
| BlsI | GCNGC | 7 cut(s) | 109, 137, 263, 329, 500, 620, 1137 |
| BmcAI | AGTACT | 1 cut(s) | 41 |
| Bme1390I | CCNGG | 5 cut(s) | 495, 717, 915, 1061, 1081 |
| BmgT120I | GGNCC | 2 cut(s) | 539, 1057 |
| BmiI | GGNNCC | 2 cut(s) | 541, 1225 |
| BmrFI | CCNGG | 5 cut(s) | 495, 717, 915, 1061, 1081 |
| BmsI | GCATC | 1 cut(s) | 217 |
| BpiI | GAAGAC | 1 cut(s) | 895 |
| BpmI | CTGGAG | 2 cut(s) | 936, 1082 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1245 |
| BpuEI | CTTGAG | 2 cut(s) | 150, 218 |
| BsaI | GGTCTC | 3 cut(s) | 590, 1058, 1121 |
| BsaJI | CCNNGG | 5 cut(s) | 52, 502, 715, 1059, 1079 |
| BsaWI | WCCGGW | 1 cut(s) | 190 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 345, 375, 909, 939 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 130, 131, 314 |
| Bse1I | ACTGG | 1 cut(s) | 595 |
| Bse3DI | GCAATG | 1 cut(s) | 580 |
| BseAI | TCCGGA | 1 cut(s) | 190 |
| BseBI | CCWGG | 5 cut(s) | 495, 717, 915, 1061, 1081 |
| BseDI | CCNNGG | 5 cut(s) | 52, 502, 715, 1059, 1079 |
| BseGI | GGATG | 9 cut(s) | 232, 364, 367, 407, 565, 889, 910, 1120, 1210 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 130, 131, 314 |
| BseMI | GCAATG | 1 cut(s) | 580 |
| BseMII | CTCAG | 1 cut(s) | 173 |
| BseNI | ACTGG | 1 cut(s) | 595 |
| BseRI | GAGGAG | 3 cut(s) | 887, 1139, 1169 |
| BseSI | GKGCMC | 1 cut(s) | 1228 |
| BseXI | GCAGC | 4 cut(s) | 339, 485, 605, 1122 |
| Bsh1236I | CGCG | 1 cut(s) | 430 |
| BshFI | GGCC | 4 cut(s) | 264, 540, 982, 1058 |
| BshNI | GGYRCC | 1 cut(s) | 1223 |
| BsiHKAI | GWGCWC | 3 cut(s) | 16, 786, 1246 |
| BsiSI | CCGG | 2 cut(s) | 191, 737 |
| BslFI | GGGAC | 1 cut(s) | 418 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 130, 131, 314 |
| BsmAI | GTCTC | 3 cut(s) | 590, 1058, 1121 |
| BsmFI | GGGAC | 1 cut(s) | 418 |
| BsmI | GAATGC | 1 cut(s) | 1124 |
| BsnI | GGCC | 4 cut(s) | 264, 540, 982, 1058 |
| Bso31I | GGTCTC | 3 cut(s) | 590, 1058, 1121 |
| Bsp1286I | GDGCHC | 4 cut(s) | 16, 786, 1228, 1246 |
| Bsp13I | TCCGGA | 1 cut(s) | 190 |
| Bsp143I | GATC | 9 cut(s) | 48, 82, 139, 187, 204, 391, 549, 613, 934 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1245 |
| BspACI | CCGC | 5 cut(s) | 69, 108, 135, 252, 261 |
| BspANI | GGCC | 4 cut(s) | 264, 540, 982, 1058 |
| BspCNI | CTCAG | 1 cut(s) | 174 |
| BspEI | TCCGGA | 1 cut(s) | 190 |
| BspFNI | CGCG | 1 cut(s) | 430 |
| BspHI | TCATGA | 1 cut(s) | 987 |
| BspLI | GGNNCC | 2 cut(s) | 541, 1225 |
| BspPI | GGATC | 5 cut(s) | 43, 134, 182, 544, 621 |
| BspT107I | GGYRCC | 1 cut(s) | 1223 |
| BspTI | CTTAAG | 1 cut(s) | 374 |
| BspTNI | GGTCTC | 3 cut(s) | 590, 1058, 1121 |
| BsrDI | GCAATG | 1 cut(s) | 580 |
| BsrI | ACTGG | 1 cut(s) | 595 |
| BssECI | CCNNGG | 5 cut(s) | 52, 502, 715, 1059, 1079 |
| BssMI | GATC | 9 cut(s) | 48, 82, 139, 187, 204, 391, 549, 613, 934 |
| BssT1I | CCWWGG | 2 cut(s) | 52, 502 |
| Bst2UI | CCWGG | 5 cut(s) | 495, 717, 915, 1061, 1081 |
| Bst4CI | ACNGT | 4 cut(s) | 745, 1018, 1050, 1069 |
| BstAFI | CTTAAG | 1 cut(s) | 374 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 579 |
| BstC8I | GCNNGC | 2 cut(s) | 689, 1176 |
| BstDEI | CTNAG | 3 cut(s) | 182, 789, 1245 |
| BstF5I | GGATG | 9 cut(s) | 232, 364, 367, 407, 565, 889, 910, 1120, 1210 |
| BstFNI | CGCG | 1 cut(s) | 430 |
| BstH2I | RGCGCY | 1 cut(s) | 737 |
| BstHHI | GCGC | 4 cut(s) | 432, 623, 736, 1186 |
| BstKTI | GATC | 9 cut(s) | 51, 85, 142, 190, 207, 394, 552, 616, 937 |
| BstMAI | GTCTC | 3 cut(s) | 590, 1058, 1121 |
| BstMBI | GATC | 9 cut(s) | 48, 82, 139, 187, 204, 391, 549, 613, 934 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 33, 258, 450, 579, 697, 731, 1171, 1190 |
| BstNI | CCWGG | 5 cut(s) | 495, 717, 915, 1061, 1081 |
| BstNSI | RCATGY | 4 cut(s) | 492, 691, 1184, 1216 |
| BstSCI | CCNGG | 5 cut(s) | 493, 715, 913, 1059, 1079 |
| BstSLI | GKGCMC | 1 cut(s) | 1228 |
| BstUI | CGCG | 1 cut(s) | 430 |
| BstV1I | GCAGC | 4 cut(s) | 339, 485, 605, 1122 |
| BstV2I | GAAGAC | 1 cut(s) | 895 |
| BstX2I | RGATCY | 3 cut(s) | 48, 204, 391 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 509 |
| BstYI | RGATCY | 3 cut(s) | 48, 204, 391 |
| BsuRI | GGCC | 4 cut(s) | 264, 540, 982, 1058 |
| BtsCI | GGATG | 9 cut(s) | 232, 364, 367, 407, 565, 889, 910, 1120, 1210 |
| BtsIMutI | CAGTG | 3 cut(s) | 1023, 1034, 1055 |
| Cac8I | GCNNGC | 2 cut(s) | 689, 1176 |
| CciI | TCATGA | 1 cut(s) | 987 |
| CfoI | GCGC | 4 cut(s) | 432, 623, 736, 1186 |
| Cfr13I | GGNCC | 2 cut(s) | 539, 1057 |
| CseI | GACGC | 1 cut(s) | 1154 |
| Csp6I | GTAC | 3 cut(s) | 40, 588, 973 |
| CviAII | CATG | 9 cut(s) | 266, 489, 688, 988, 1105, 1139, 1181, 1213, 1217 |
| CviQI | GTAC | 3 cut(s) | 40, 588, 973 |
| DdeI | CTNAG | 3 cut(s) | 182, 789, 1245 |
| DpnI | GATC | 9 cut(s) | 50, 84, 141, 189, 206, 393, 551, 615, 936 |
| DpnII | GATC | 9 cut(s) | 48, 82, 139, 187, 204, 391, 549, 613, 934 |
| DraIII | CACNNNGTG | 1 cut(s) | 854 |
| EaeI | YGGCCR | 1 cut(s) | 262 |
| EciI | GGCGGA | 1 cut(s) | 267 |
| Ecl136II | GAGCTC | 1 cut(s) | 14 |
| Eco130I | CCWWGG | 2 cut(s) | 52, 502 |
| Eco24I | GRGCYC | 1 cut(s) | 16 |
| Eco31I | GGTCTC | 3 cut(s) | 590, 1058, 1121 |
| Eco53kI | GAGCTC | 1 cut(s) | 14 |
| Eco57I | CTGAAG | 1 cut(s) | 107 |
| EcoICRI | GAGCTC | 1 cut(s) | 14 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1057 |
| EcoRII | CCWGG | 5 cut(s) | 493, 715, 913, 1059, 1079 |
| EcoT14I | CCWWGG | 2 cut(s) | 52, 502 |
| EcoT22I | ATGCAT | 1 cut(s) | 1218 |
| EcoT38I | GRGCYC | 1 cut(s) | 16 |
| ErhI | CCWWGG | 2 cut(s) | 52, 502 |
| FaeI | CATG | 9 cut(s) | 269, 492, 691, 991, 1108, 1142, 1184, 1216, 1220 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 647, 679 |
| FaqI | GGGAC | 1 cut(s) | 418 |
| FatI | CATG | 9 cut(s) | 265, 488, 687, 987, 1104, 1138, 1180, 1212, 1216 |
| FauNDI | CATATG | 1 cut(s) | 1195 |
| FbaI | TGATCA | 1 cut(s) | 934 |
| Fnu4HI | GCNGC | 7 cut(s) | 108, 136, 262, 328, 499, 619, 1136 |
| FokI | GGATG | 9 cut(s) | 239, 354, 371, 394, 552, 896, 897, 1127, 1217 |
| FriOI | GRGCYC | 1 cut(s) | 16 |
| Fsp4HI | GCNGC | 7 cut(s) | 108, 136, 262, 328, 499, 619, 1136 |
| FspI | TGCGCA | 2 cut(s) | 622, 1185 |
| GlaI | GCGC | 4 cut(s) | 431, 622, 735, 1185 |
| GluI | GCNGC | 7 cut(s) | 108, 136, 262, 328, 499, 619, 1136 |
| GsuI | CTGGAG | 2 cut(s) | 936, 1082 |
| HaeII | RGCGCY | 1 cut(s) | 737 |
| HaeIII | GGCC | 4 cut(s) | 264, 540, 982, 1058 |
| HapII | CCGG | 2 cut(s) | 191, 737 |
| HgaI | GACGC | 1 cut(s) | 1154 |
| HhaI | GCGC | 4 cut(s) | 432, 623, 736, 1186 |
| Hin1II | CATG | 9 cut(s) | 269, 492, 691, 991, 1108, 1142, 1184, 1216, 1220 |
| Hin6I | GCGC | 4 cut(s) | 430, 621, 734, 1184 |
| HinP1I | GCGC | 4 cut(s) | 430, 621, 734, 1184 |
| HindIII | AAGCTT | 1 cut(s) | 416 |
| HinfI | GANTC | 2 cut(s) | 845, 1031 |
| HpaII | CCGG | 2 cut(s) | 191, 737 |
| HphI | GGTGA | 4 cut(s) | 647, 731, 764, 818 |
| Hpy166II | GTNNAC | 1 cut(s) | 1147 |
| Hpy188I | TCNGA | 2 cut(s) | 87, 183 |
| Hpy188III | TCNNGA | 6 cut(s) | 115, 143, 191, 510, 650, 988 |
| Hpy8I | GTNNAC | 1 cut(s) | 1147 |
| Hpy99I | CGWCG | 1 cut(s) | 1170 |
| HpyAV | CCTTC | 7 cut(s) | 85, 233, 301, 333, 342, 634, 676 |
| HpyCH4III | ACNGT | 4 cut(s) | 745, 1018, 1050, 1069 |
| HpyCH4IV | ACGT | 2 cut(s) | 199, 435 |
| HpyCH4V | TGCA | 8 cut(s) | 453, 562, 573, 582, 691, 1053, 1138, 1216 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 33, 258, 450, 579, 697, 731, 1171, 1190 |
| HpyF3I | CTNAG | 3 cut(s) | 182, 789, 1245 |
| HpySE526I | ACGT | 2 cut(s) | 199, 435 |
| Hsp92II | CATG | 9 cut(s) | 269, 492, 691, 991, 1108, 1142, 1184, 1216, 1220 |
| HspAI | GCGC | 4 cut(s) | 430, 621, 734, 1184 |
| Kpn2I | TCCGGA | 1 cut(s) | 190 |
| Ksp22I | TGATCA | 1 cut(s) | 934 |
| Kzo9I | GATC | 9 cut(s) | 48, 82, 139, 187, 204, 391, 549, 613, 934 |
| LmnI | GCTCC | 2 cut(s) | 19, 449 |
| Lsp1109I | GCAGC | 4 cut(s) | 339, 485, 605, 1122 |
| LweI | GCATC | 1 cut(s) | 217 |
| MaeII | ACGT | 2 cut(s) | 199, 435 |
| MaeIII | GTNAC | 2 cut(s) | 745, 834 |
| MalI | GATC | 9 cut(s) | 50, 84, 141, 189, 206, 393, 551, 615, 936 |
| MboI | GATC | 9 cut(s) | 48, 82, 139, 187, 204, 391, 549, 613, 934 |
| MboII | GAAGA | 3 cut(s) | 100, 401, 900 |
| MflI | RGATCY | 3 cut(s) | 48, 204, 391 |
| MhlI | GDGCHC | 4 cut(s) | 16, 786, 1228, 1246 |
| MluCI | AATT | 4 cut(s) | 672, 863, 938, 1109 |
| MlyI | GAGTC | 1 cut(s) | 1025 |
| Mph1103I | ATGCAT | 1 cut(s) | 1218 |
| MroI | TCCGGA | 1 cut(s) | 190 |
| MseI | TTAA | 6 cut(s) | 153, 375, 603, 795, 872, 903 |
| MslI | CAYNNNNRTG | 2 cut(s) | 882, 1221 |
| MspCI | CTTAAG | 1 cut(s) | 374 |
| MspI | CCGG | 2 cut(s) | 191, 737 |
| MspR9I | CCNGG | 5 cut(s) | 495, 717, 915, 1061, 1081 |
| Mva1269I | GAATGC | 1 cut(s) | 1124 |
| MvaI | CCWGG | 5 cut(s) | 495, 717, 915, 1061, 1081 |
| MvnI | CGCG | 1 cut(s) | 430 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 33, 258, 450, 579, 697, 731, 1171, 1190 |
| NdeI | CATATG | 1 cut(s) | 1195 |
| NdeII | GATC | 9 cut(s) | 48, 82, 139, 187, 204, 391, 549, 613, 934 |
| NlaIII | CATG | 9 cut(s) | 269, 492, 691, 991, 1108, 1142, 1184, 1216, 1220 |
| NlaIV | GGNNCC | 2 cut(s) | 541, 1225 |
| NmuCI | GTSAC | 1 cut(s) | 834 |
| NsbI | TGCGCA | 2 cut(s) | 622, 1185 |
| NsiI | ATGCAT | 1 cut(s) | 1218 |
| NspI | RCATGY | 4 cut(s) | 492, 691, 1184, 1216 |
| PaeI | GCATGC | 1 cut(s) | 691 |
| PagI | TCATGA | 1 cut(s) | 987 |
| PciI | ACATGT | 1 cut(s) | 488 |
| PctI | GAATGC | 1 cut(s) | 1124 |
| PfeI | GAWTC | 1 cut(s) | 845 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 314 |
| PfoI | TCCNGGA | 1 cut(s) | 913 |
| PkrI | GCNGC | 7 cut(s) | 109, 137, 263, 329, 500, 620, 1137 |
| PleI | GAGTC | 1 cut(s) | 1025 |
| PpsI | GAGTC | 1 cut(s) | 1025 |
| PscI | ACATGT | 1 cut(s) | 488 |
| PshBI | ATTAAT | 1 cut(s) | 603 |
| Psp124BI | GAGCTC | 1 cut(s) | 16 |
| Psp6I | CCWGG | 5 cut(s) | 493, 715, 913, 1059, 1079 |
| PspGI | CCWGG | 5 cut(s) | 493, 715, 913, 1059, 1079 |
| PspN4I | GGNNCC | 2 cut(s) | 541, 1225 |
| PspPI | GGNCC | 2 cut(s) | 539, 1057 |
| PsuI | RGATCY | 3 cut(s) | 48, 204, 391 |
| RsaI | GTAC | 3 cut(s) | 41, 589, 974 |
| RsaNI | GTAC | 3 cut(s) | 40, 588, 973 |
| RseI | CAYNNNNRTG | 2 cut(s) | 882, 1221 |
| SacI | GAGCTC | 1 cut(s) | 16 |
| SaqAI | TTAA | 6 cut(s) | 153, 375, 603, 795, 872, 903 |
| SatI | GCNGC | 7 cut(s) | 108, 136, 262, 328, 499, 619, 1136 |
| Sau3AI | GATC | 9 cut(s) | 48, 82, 139, 187, 204, 391, 549, 613, 934 |
| Sau96I | GGNCC | 2 cut(s) | 539, 1057 |
| ScaI | AGTACT | 1 cut(s) | 41 |
| SchI | GAGTC | 1 cut(s) | 1025 |
| ScrFI | CCNGG | 5 cut(s) | 495, 717, 915, 1061, 1081 |
| SduI | GDGCHC | 4 cut(s) | 16, 786, 1228, 1246 |
| SfaNI | GCATC | 1 cut(s) | 217 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 882, 1221 |
| SmlI | CTYRAG | 3 cut(s) | 165, 233, 374 |
| SmoI | CTYRAG | 3 cut(s) | 165, 233, 374 |
| SphI | GCATGC | 1 cut(s) | 691 |
| Sse9I | AATT | 4 cut(s) | 672, 863, 938, 1109 |
| SsiI | CCGC | 5 cut(s) | 69, 108, 135, 252, 261 |
| SstI | GAGCTC | 1 cut(s) | 16 |
| StyD4I | CCNGG | 5 cut(s) | 493, 715, 913, 1059, 1079 |
| StyI | CCWWGG | 2 cut(s) | 52, 502 |
| TaaI | ACNGT | 4 cut(s) | 745, 1018, 1050, 1069 |
| TaiI | ACGT | 2 cut(s) | 202, 438 |
| TaqI | TCGA | 3 cut(s) | 337, 545, 1168 |
| TasI | AATT | 4 cut(s) | 672, 863, 938, 1109 |
| TatI | WGTACW | 1 cut(s) | 39 |
| TauI | GCSGC | 3 cut(s) | 110, 138, 264 |
| TfiI | GAWTC | 1 cut(s) | 845 |
| Tru1I | TTAA | 6 cut(s) | 153, 375, 603, 795, 872, 903 |
| Tru9I | TTAA | 6 cut(s) | 153, 375, 603, 795, 872, 903 |
| TscAI | CASTG | 3 cut(s) | 1023, 1041, 1055 |
| TseFI | GTSAC | 1 cut(s) | 834 |
| TseI | GCWGC | 4 cut(s) | 327, 498, 618, 1135 |
| Tsp45I | GTSAC | 1 cut(s) | 834 |
| TspDTI | ATGAA | 7 cut(s) | 530, 744, 856, 976, 998, 1004, 1131 |
| TspRI | CASTG | 3 cut(s) | 1023, 1041, 1055 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 314 |
| Vha464I | CTTAAG | 1 cut(s) | 374 |
| VspI | ATTAAT | 1 cut(s) | 603 |
| XceI | RCATGY | 4 cut(s) | 492, 691, 1184, 1216 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 293 |
| ZrmI | AGTACT | 1 cut(s) | 41 |
| Zsp2I | ATGCAT | 1 cut(s) | 1218 |