FvH4_3g26220

DnaJ protein homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000572
Physical Location & Seq
Forward (+)
19151797 .. 19154610
2814 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g26220.t1

Sequence Viewer

Length: 1272 bp
ATGTTCGGAGGAGGCAGGGCGCCCAAGAAGAGCGACAATTCAAAATACTATGAGATTCTGGGAGTCTCCAAGACTGCTTCGCCTGAAGATGTGAAGAAGGCTTACAAGAAAGCCGCCATCAAGAACCATCCTGATAAGGGCGGAGATCCTGAAAAATTTAAGGAGTTGGCTCAGGCTTACGAGGTTCTAAGTGACCCCGAGAAGCGTGAAATATATGATCGATATGGTGAGGACGGACTCAAGGAAGAAATGCAATCCGGTGGCCATGACCCATTTGATATCTTTTCGTCTTTCTTTGGTGGTGGCGGCAGCCCTTTTGGAGGCATGCCGGGTGGTAGTAGTAGAGGACGGAGACAGAGACGTGGAGAAGATGTGGTTCACCCATTGAAGGTCTCTTTGGAAGACCTATATCTTGGAACCTCAAAGAAACTTTCCCTATCTCGCAATGTGTTGTGCTCCAAGTGCAAAGGCAAGGGGTCAAAATCTGGAGCCTCGACCAAGTGTGGTGGGTGCCAAGGAACTGGTATGAAGGTCACTATTAGGCATCTTGGACCCTCTATGATTCAACAAATGCAGCATGCTTGCAATGAATGCAAGGGTACTGGAGAGACCATCAGTGACAAAGACCGCTGTGGACAGTGCAAGGGAGAGAAGGTTGTTCATGAGAAGAAGGTTTTGGAAGTACATGTGGAGAAGGGTATGCAGAATGGACAGAAAATCACATTTCCTGGTGAAGCTGATGAAGCTCCTGACACAGTCACTGGTGATATAGTTTTCATCATTCAGCAAAAGGAACATCCAAAGTTCAAGAGAAAGATGGACGACCTTTTTGTGGAGCACTCTTTGTCACTCACAGATGCTCTATGTGGTTTTCAGTTTGTGCTGAACCATTTGGATGGCAGGCAGCTTCTTATTAAATCAAACCCTGGTGAAGTTGTGAAGCCTGATTCGTTTAAGGCTGTCAATGATGAGGGTATGCCAATGTACCAGAGGCCATTCATGAAAGGCAAGCTGTACATTCATTTCTCAGTGGATTTCCCTGAAACTCTGAGCCCTGAGCAGGTCAAGGCTTTGGAAGCTGCTCTTCCATCAAGGGCATCATCTCAGCAGCTGACAGATATGGAGTTGGATGAGTGTGAGGAGACAACCCTGCATGATGTGAACATGGAAGAGGAGATGAGGAGGAAACAGCACCAGGCTCATTCAGAGGCCTATGATGAGGACGATGACATGCCTGGTGGTGCACAGAGGGTGCAGTGCGCACAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

424

Amino Acids

46.85

Weight (kDa)

6.19

Isoelectric Point (pI)

39.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 15 - 73 4.7e-23 DnaJ domain
DnaJ_C PF01556 126 - 347 2.3e-35 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 152 - 218 6.3e-14 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000572)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44110 AT3G44110 AT5G22060
fragaria_vesca FvH4_3g26170 FvH4_3g26170 FvH4_3g26170 FvH4_3g26220 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270
malus_domestica MD02G1258400.v1.1 MD03G1159100.v1.1 MD07G1062300.v1.1 MD11G1174700.v1.1
prunus_persica Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.6G146900_v2.0.a1 Prupe.6G146900_v2.0.a1
pyrus_communis pycom02g21960 pycom03g11140 pycom07g04780 pycom11g14940
rosa_chinensis RchiOBHm_Chr1g0332041 RchiOBHm_Chr1g0364381 RchiOBHm_Chr4g0428981 RchiOBHm_Chr5g0049001 RchiOBHm_Chr5g0049021
rosa_laevigata RLG00000007108 RLG00000013380 RLG00000027486 RLG00000029697 RLG00000034581 RLG00000034584
rosa_multiflora Rmu_co8449175.1_g000001 Rmu_sc0000441.1_g000032 Rmu_sc0000530.1_g000003 Rmu_sc0003358.1_g000010 Rmu_sc0004058.1_g000007 Rmu_sc0004522.1_g000007 Rmu_sc0008629.1_g000009 Rmu_sc0009489.1_g000007 Rmu_sc0014815.1_g000013
rosa_roxburghii Rroxscaffold_1G00032850 Rroxscaffold_1G00032870 Rroxscaffold_4G00292340 Rroxscaffold_4G00318430 Rroxscaffold_5G00370640
rosa_rugosa Rorug01G0097800 Rorug01G0097900 Rorug01G0098000 Rorug01G0315800 Rorug04G0231300 Rorug05G0241800 Rorug05G0241900 Rorug05G0242000 Rorug05G0242100.1 Rorug05G0242200 Rorug05G0242300 Rorug06G0102700 Rorug06G0102800
rosa_samantha Rh1AG121800 Rh1BG093200 Rh1CG303100 Rh1DG127500 Rh4BG293700 Rh4DG290600 Rh5AG322000 Rh5CG357500 Rh5CG357600 Rh5DG344100 Rh6BG218000
rosa_wichuraiana Rw0G008830 Rw1G009930 Rw1G028700 Rw5G030390 Rw5G030400 Rw6G018630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1261
Acc36I ACCTGC 1 cut(s) 1051
AccB1I GGYRCC 2 cut(s) 19, 510
AciI CCGC 4 cut(s) 114, 141, 306, 628
AclWI GGATC 1 cut(s) 140
AcoI YGGCCR 1 cut(s) 262
AcsI RAATTY 1 cut(s) 155
AcuI CTGAAG 1 cut(s) 105
AcyI GRCGYC 1 cut(s) 20
AfaI GTAC 4 cut(s) 601, 684, 986, 1016
AfiI CCNNNNNNNGG 5 cut(s) 137, 320, 388, 832, 1060
AflIII ACRYGT 1 cut(s) 685
AgsI TTSAA 4 cut(s) 42, 388, 566, 808
AjiI CACGTC 1 cut(s) 362
AjnI CCWGG 4 cut(s) 727, 925, 1194, 1234
AjuI GAANNNNNNNTTGG 4 cut(s) 380, 412, 659, 691
AleI CACNNNNGTG 1 cut(s) 1267
AluBI AGCT 6 cut(s) 737, 746, 907, 1012, 1079, 1111
AluI AGCT 6 cut(s) 737, 746, 907, 1012, 1079, 1111
Alw21I GWGCWC 3 cut(s) 458, 840, 1246
Alw26I GTCTC 6 cut(s) 70, 346, 352, 397, 602, 1136
Alw44I GTGCAC 1 cut(s) 1242
AlwI GGATC 1 cut(s) 140
AlwNI CAGNNNCTG 2 cut(s) 761, 1111
Ama87I CYCGRG 1 cut(s) 197
AoxI GGCC 3 cut(s) 262, 992, 1209
ApaLI GTGCAC 1 cut(s) 1242
ApeKI GCWGC 5 cut(s) 309, 574, 904, 1079, 1108
ApoI RAATTY 1 cut(s) 155
ArsI GACNNNNNNTTYG 2 cut(s) 812, 844
AspLEI GCGC 2 cut(s) 22, 1262
AspS9I GGNCC 1 cut(s) 551
AsuC2I CCSGG 1 cut(s) 330
AsuHPI GGTGA 5 cut(s) 239, 371, 743, 776, 941
AvaI CYCGRG 1 cut(s) 197
AvaII GGWCC 1 cut(s) 551
BaeGI GKGCMC 1 cut(s) 1246
BalI TGGCCA 1 cut(s) 264
BanI GGYRCC 2 cut(s) 19, 510
BanII GRGCYC 1 cut(s) 1055
BarI GAAGNNNNNNTAC 2 cut(s) 86, 118
BbsI GAAGAC 1 cut(s) 408
Bbv12I GWGCWC 3 cut(s) 458, 840, 1246
BbvI GCAGC 5 cut(s) 321, 586, 916, 1066, 1120
BccI CCATC 6 cut(s) 125, 135, 620, 811, 890, 1096
BciT130I CCWGG 4 cut(s) 729, 927, 1196, 1236
BcnI CCSGG 1 cut(s) 330
BcoDI GTCTC 6 cut(s) 70, 346, 352, 397, 602, 1136
BfoI RGCGCY 1 cut(s) 23
BfuAI ACCTGC 1 cut(s) 1051
BisI GCNGC 7 cut(s) 114, 307, 310, 575, 905, 1080, 1109
BlsI GCNGC 7 cut(s) 115, 308, 311, 576, 906, 1081, 1110
Bme1390I CCNGG 5 cut(s) 330, 729, 927, 1196, 1236
Bme18I GGWCC 1 cut(s) 551
BmeT110I CYCGRG 1 cut(s) 197
BmgBI CACGTC 1 cut(s) 362
BmgT120I GGNCC 1 cut(s) 551
BmiI GGNNCC 5 cut(s) 21, 418, 490, 512, 553
BmrFI CCNGG 5 cut(s) 330, 729, 927, 1196, 1236
BmsI GCATC 3 cut(s) 553, 847, 1106
BpiI GAAGAC 1 cut(s) 408
BpmI CTGGAG 2 cut(s) 507, 624
Bpu10I CCTNAGC 2 cut(s) 171, 1056
BpuEI CTTGAG 1 cut(s) 224
BpuMI CCSGG 1 cut(s) 330
Bsa29I ATCGAT 1 cut(s) 220
BsaHI GRCGYC 1 cut(s) 20
BsaI GGTCTC 2 cut(s) 397, 602
BsaJI CCNNGG 2 cut(s) 514, 925
BsaWI WCCGGW 1 cut(s) 257
BsaXI ACNNNNNCTCC 4 cut(s) 357, 387, 639, 669
Bsc4I CCNNNNNNNGG 5 cut(s) 137, 320, 388, 832, 1060
Bse1I ACTGG 3 cut(s) 526, 607, 766
Bse3DI GCAATG 2 cut(s) 451, 592
BseBI CCWGG 4 cut(s) 729, 927, 1196, 1236
BseCI ATCGAT 1 cut(s) 220
BseDI CCNNGG 2 cut(s) 514, 925
BseGI GGATG 4 cut(s) 127, 796, 901, 1135
BseLI CCNNNNNNNGG 5 cut(s) 137, 320, 388, 832, 1060
BseMI GCAATG 2 cut(s) 451, 592
BseMII CTCAG 5 cut(s) 185, 1040, 1041, 1047, 1118
BseNI ACTGG 3 cut(s) 526, 607, 766
BseRI GAGGAG 4 cut(s) 24, 1154, 1187, 1195
BseSI GKGCMC 1 cut(s) 1246
BseXI GCAGC 5 cut(s) 321, 586, 916, 1066, 1120
BshFI GGCC 3 cut(s) 264, 994, 1211
BshNI GGYRCC 2 cut(s) 19, 510
BshVI ATCGAT 1 cut(s) 220
BsiHKAI GWGCWC 3 cut(s) 458, 840, 1246
BsiHKCI CYCGRG 1 cut(s) 197
BsiSI CCGG 2 cut(s) 258, 329
BslI CCNNNNNNNGG 5 cut(s) 137, 320, 388, 832, 1060
BsmAI GTCTC 6 cut(s) 70, 346, 352, 397, 602, 1136
BsmBI CGTCTC 1 cut(s) 352
BsmI GAATGC 1 cut(s) 596
BsnI GGCC 3 cut(s) 264, 994, 1211
Bso31I GGTCTC 2 cut(s) 397, 602
BsoBI CYCGRG 1 cut(s) 197
Bsp1286I GDGCHC 4 cut(s) 458, 840, 1055, 1246
Bsp1407I TGTACA 1 cut(s) 1014
Bsp143I GATC 2 cut(s) 145, 217
BspACI CCGC 4 cut(s) 114, 141, 306, 628
BspANI GGCC 3 cut(s) 264, 994, 1211
BspCNI CTCAG 5 cut(s) 184, 1040, 1041, 1048, 1117
BspDI ATCGAT 1 cut(s) 220
BspHI TCATGA 2 cut(s) 661, 999
BspLI GGNNCC 5 cut(s) 21, 418, 490, 512, 553
BspMI ACCTGC 1 cut(s) 1051
BspPI GGATC 1 cut(s) 140
BspQI GCTCTTC 2 cut(s) 23, 1089
BspT107I GGYRCC 2 cut(s) 19, 510
BspTNI GGTCTC 2 cut(s) 397, 602
BsrDI GCAATG 2 cut(s) 451, 592
BsrGI TGTACA 1 cut(s) 1014
BsrI ACTGG 3 cut(s) 526, 607, 766
BssECI CCNNGG 2 cut(s) 514, 925
BssMI GATC 2 cut(s) 145, 217
BssNI GRCGYC 1 cut(s) 20
BssT1I CCWWGG 1 cut(s) 514
Bst2UI CCWGG 4 cut(s) 729, 927, 1196, 1236
Bst4CI ACNGT 2 cut(s) 639, 757
Bst6I CTCTTC 3 cut(s) 23, 1089, 1164
BstACI GRCGYC 1 cut(s) 20
BstAPI GCANNNNNTGC 1 cut(s) 591
BstAUI TGTACA 1 cut(s) 1014
BstC8I GCNNGC 5 cut(s) 326, 579, 583, 902, 1010
BstDEI CTNAG 6 cut(s) 171, 188, 1027, 1049, 1056, 1104
BstENI CCTNNNNNAGG 1 cut(s) 318
BstF5I GGATG 4 cut(s) 127, 796, 901, 1135
BstH2I RGCGCY 1 cut(s) 23
BstHHI GCGC 2 cut(s) 22, 1262
BstKTI GATC 2 cut(s) 148, 220
BstMAI GTCTC 6 cut(s) 70, 346, 352, 397, 602, 1136
BstMBI GATC 2 cut(s) 145, 217
BstMWI GCNNNNNNNGC 4 cut(s) 462, 591, 743, 1076
BstNI CCWGG 4 cut(s) 729, 927, 1196, 1236
BstNSI RCATGY 4 cut(s) 328, 581, 689, 1234
BstSCI CCNGG 5 cut(s) 328, 727, 925, 1194, 1234
BstSLI GKGCMC 1 cut(s) 1246
BstV1I GCAGC 5 cut(s) 321, 586, 916, 1066, 1120
BstV2I GAAGAC 1 cut(s) 408
BstX2I RGATCY 1 cut(s) 145
BstXI CCANNNNNNTGG 2 cut(s) 521, 896
BstYI RGATCY 1 cut(s) 145
Bsu15I ATCGAT 1 cut(s) 220
BsuRI GGCC 3 cut(s) 264, 994, 1211
BsuTUI ATCGAT 1 cut(s) 220
BtrI CACGTC 1 cut(s) 362
BtsCI GGATG 4 cut(s) 127, 796, 901, 1135
BtsI GCAGTG 1 cut(s) 1262
BtsIMutI CAGTG 5 cut(s) 622, 644, 759, 1035, 1262
BveI ACCTGC 1 cut(s) 1051
Cac8I GCNNGC 5 cut(s) 326, 579, 583, 902, 1010
CaiI CAGNNNCTG 2 cut(s) 761, 1111
CciI TCATGA 2 cut(s) 661, 999
CfoI GCGC 2 cut(s) 22, 1262
Cfr13I GGNCC 1 cut(s) 551
ClaI ATCGAT 1 cut(s) 220
Csp6I GTAC 4 cut(s) 600, 683, 985, 1015
CspCI CAANNNNNGTGG 2 cut(s) 487, 522
CviAII CATG 9 cut(s) 266, 325, 578, 662, 686, 1000, 1154, 1165, 1231
CviQI GTAC 4 cut(s) 600, 683, 985, 1015
DdeI CTNAG 6 cut(s) 171, 188, 1027, 1049, 1056, 1104
DinI GGCGCC 1 cut(s) 21
DpnI GATC 2 cut(s) 147, 219
DpnII GATC 2 cut(s) 145, 217
EaeI YGGCCR 1 cut(s) 262
Eam1104I CTCTTC 3 cut(s) 23, 1089, 1164
EarI CTCTTC 3 cut(s) 23, 1089, 1164
EciI GGCGGA 1 cut(s) 156
Eco130I CCWWGG 1 cut(s) 514
Eco147I AGGCCT 1 cut(s) 1211
Eco24I GRGCYC 1 cut(s) 1055
Eco31I GGTCTC 2 cut(s) 397, 602
Eco32I GATATC 1 cut(s) 280
Eco47I GGWCC 1 cut(s) 551
Eco57I CTGAAG 1 cut(s) 105
Eco88I CYCGRG 1 cut(s) 197
EcoNI CCTNNNNNAGG 1 cut(s) 318
EcoRII CCWGG 4 cut(s) 727, 925, 1194, 1234
EcoRV GATATC 1 cut(s) 280
EcoT14I CCWWGG 1 cut(s) 514
EcoT38I GRGCYC 1 cut(s) 1055
EgeI GGCGCC 1 cut(s) 21
EheI GGCGCC 1 cut(s) 21
ErhI CCWWGG 1 cut(s) 514
Esp3I CGTCTC 1 cut(s) 352
FaeI CATG 9 cut(s) 269, 328, 581, 665, 689, 1003, 1157, 1168, 1234
FalI AAGNNNNNCTT 2 cut(s) 1068, 1100
FatI CATG 9 cut(s) 265, 324, 577, 661, 685, 999, 1153, 1164, 1230
Fnu4HI GCNGC 7 cut(s) 114, 307, 310, 575, 905, 1080, 1109
FokI GGATG 4 cut(s) 114, 783, 908, 1142
FriOI GRGCYC 1 cut(s) 1055
Fsp4HI GCNGC 7 cut(s) 114, 307, 310, 575, 905, 1080, 1109
FspAI RTGCGCAY 1 cut(s) 1261
FspI TGCGCA 1 cut(s) 1261
GlaI GCGC 2 cut(s) 21, 1261
GluI GCNGC 7 cut(s) 114, 307, 310, 575, 905, 1080, 1109
GsuI CTGGAG 2 cut(s) 507, 624
HaeII RGCGCY 1 cut(s) 23
HaeIII GGCC 3 cut(s) 264, 994, 1211
HapII CCGG 2 cut(s) 258, 329
HhaI GCGC 2 cut(s) 22, 1262
Hin1I GRCGYC 1 cut(s) 20
Hin1II CATG 9 cut(s) 269, 328, 581, 665, 689, 1003, 1157, 1168, 1234
Hin6I GCGC 2 cut(s) 20, 1260
HinP1I GCGC 2 cut(s) 20, 1260
HinfI GANTC 5 cut(s) 55, 63, 237, 562, 947
HpaII CCGG 2 cut(s) 258, 329
HphI GGTGA 5 cut(s) 239, 371, 743, 776, 941
Hpy166II GTNNAC 4 cut(s) 379, 635, 1162, 1244
Hpy188I TCNGA 3 cut(s) 8, 1050, 1207
Hpy188III TCNNGA 8 cut(s) 121, 131, 149, 486, 662, 749, 808, 1000
Hpy8I GTNNAC 4 cut(s) 379, 635, 1162, 1244
HpyAV CCTTC 6 cut(s) 91, 382, 523, 646, 664, 688
HpyCH4III ACNGT 2 cut(s) 639, 757
HpyCH4IV ACGT 1 cut(s) 361
HpyF10VI GCNNNNNNNGC 4 cut(s) 462, 591, 743, 1076
HpyF3I CTNAG 6 cut(s) 171, 188, 1027, 1049, 1056, 1104
HpySE526I ACGT 1 cut(s) 361
Hsp92I GRCGYC 1 cut(s) 20
Hsp92II CATG 9 cut(s) 269, 328, 581, 665, 689, 1003, 1157, 1168, 1234
HspAI GCGC 2 cut(s) 20, 1260
KasI GGCGCC 1 cut(s) 19
Kzo9I GATC 2 cut(s) 145, 217
LguI GCTCTTC 2 cut(s) 23, 1089
LmnI GCTCC 4 cut(s) 461, 488, 751, 835
Lsp1109I GCAGC 5 cut(s) 321, 586, 916, 1066, 1120
LweI GCATC 3 cut(s) 553, 847, 1106
MaeII ACGT 1 cut(s) 361
MaeIII GTNAC 5 cut(s) 191, 532, 617, 757, 846
MalI GATC 2 cut(s) 147, 219
MboI GATC 2 cut(s) 145, 217
MboII GAAGA 9 cut(s) 40, 98, 106, 257, 380, 413, 679, 1076, 1181
MflI RGATCY 1 cut(s) 145
MhlI GDGCHC 4 cut(s) 458, 840, 1055, 1246
MlsI TGGCCA 1 cut(s) 264
MluCI AATT 2 cut(s) 37, 155
MluNI TGGCCA 1 cut(s) 264
Mly113I GGCGCC 1 cut(s) 20
MlyI GAGTC 2 cut(s) 72, 231
MmeI TCCRAC 1 cut(s) 1107
Mox20I TGGCCA 1 cut(s) 264
MscI TGGCCA 1 cut(s) 264
MseI TTAA 3 cut(s) 159, 915, 954
MslI CAYNNNNRTG 2 cut(s) 894, 1267
Msp20I TGGCCA 1 cut(s) 264
MspA1I CMGCKG 2 cut(s) 630, 1111
MspI CCGG 2 cut(s) 258, 329
MspR9I CCNGG 5 cut(s) 330, 729, 927, 1196, 1236
Mva1269I GAATGC 1 cut(s) 596
MvaI CCWGG 4 cut(s) 729, 927, 1196, 1236
MwoI GCNNNNNNNGC 4 cut(s) 462, 591, 743, 1076
NarI GGCGCC 1 cut(s) 20
NciI CCSGG 1 cut(s) 330
NdeII GATC 2 cut(s) 145, 217
NlaIII CATG 9 cut(s) 269, 328, 581, 665, 689, 1003, 1157, 1168, 1234
NlaIV GGNNCC 5 cut(s) 21, 418, 490, 512, 553
NmuCI GTSAC 5 cut(s) 191, 532, 617, 757, 846
NsbI TGCGCA 1 cut(s) 1261
NspI RCATGY 4 cut(s) 328, 581, 689, 1234
OliI CACNNNNGTG 1 cut(s) 1267
PaeI GCATGC 2 cut(s) 328, 581
PagI TCATGA 2 cut(s) 661, 999
PceI AGGCCT 1 cut(s) 1211
PciI ACATGT 1 cut(s) 685
PciSI GCTCTTC 2 cut(s) 23, 1089
PctI GAATGC 1 cut(s) 596
PfeI GAWTC 3 cut(s) 55, 562, 947
PflFI GACNNNGTC 1 cut(s) 755
PkrI GCNGC 7 cut(s) 115, 308, 311, 576, 906, 1081, 1110
PleI GAGTC 2 cut(s) 71, 231
PluTI GGCGCC 1 cut(s) 23
PpsI GAGTC 2 cut(s) 71, 231
PscI ACATGT 1 cut(s) 685
Psp6I CCWGG 4 cut(s) 727, 925, 1194, 1234
PspGI CCWGG 4 cut(s) 727, 925, 1194, 1234
PspN4I GGNNCC 5 cut(s) 21, 418, 490, 512, 553
PspPI GGNCC 1 cut(s) 551
PstNI CAGNNNCTG 2 cut(s) 761, 1111
PsuI RGATCY 1 cut(s) 145
PsyI GACNNNGTC 1 cut(s) 755
PvuII CAGCTG 1 cut(s) 1111
RsaI GTAC 4 cut(s) 601, 684, 986, 1016
RsaNI GTAC 4 cut(s) 600, 683, 985, 1015
RseI CAYNNNNRTG 2 cut(s) 894, 1267
SapI GCTCTTC 2 cut(s) 23, 1089
SaqAI TTAA 3 cut(s) 159, 915, 954
SatI GCNGC 7 cut(s) 114, 307, 310, 575, 905, 1080, 1109
Sau3AI GATC 2 cut(s) 145, 217
Sau96I GGNCC 1 cut(s) 551
SchI GAGTC 2 cut(s) 72, 231
ScrFI CCNGG 5 cut(s) 330, 729, 927, 1196, 1236
SduI GDGCHC 4 cut(s) 458, 840, 1055, 1246
SfaNI GCATC 3 cut(s) 553, 847, 1106
SfoI GGCGCC 1 cut(s) 21
SinI GGWCC 1 cut(s) 551
SmiMI CAYNNNNRTG 2 cut(s) 894, 1267
SmlI CTYRAG 1 cut(s) 239
SmoI CTYRAG 1 cut(s) 239
SphI GCATGC 2 cut(s) 328, 581
Sse9I AATT 2 cut(s) 37, 155
SseBI AGGCCT 1 cut(s) 1211
SsiI CCGC 4 cut(s) 114, 141, 306, 628
SspDI GGCGCC 1 cut(s) 19
StuI AGGCCT 1 cut(s) 1211
StyD4I CCNGG 5 cut(s) 328, 727, 925, 1194, 1234
StyI CCWWGG 1 cut(s) 514
TaaI ACNGT 2 cut(s) 639, 757
TaiI ACGT 1 cut(s) 364
TaqI TCGA 2 cut(s) 220, 494
TasI AATT 2 cut(s) 37, 155
TatI WGTACW 2 cut(s) 682, 1014
TauI GCSGC 2 cut(s) 116, 309
TfiI GAWTC 3 cut(s) 55, 562, 947
Tru1I TTAA 3 cut(s) 159, 915, 954
Tru9I TTAA 3 cut(s) 159, 915, 954
TscAI CASTG 5 cut(s) 622, 644, 766, 1035, 1262
TseFI GTSAC 5 cut(s) 191, 532, 617, 757, 846
TseI GCWGC 5 cut(s) 309, 574, 904, 1079, 1108
Tsp45I GTSAC 5 cut(s) 191, 532, 617, 757, 846
TspDTI ATGAA 8 cut(s) 542, 603, 650, 756, 766, 988, 1010, 1016
TspGWI ACGGA 2 cut(s) 249, 364
TspRI CASTG 5 cut(s) 622, 644, 766, 1035, 1262
Tth111I GACNNNGTC 1 cut(s) 755
VneI GTGCAC 1 cut(s) 1242
VpaK11BI GGWCC 1 cut(s) 551
XagI CCTNNNNNAGG 1 cut(s) 318
XapI RAATTY 1 cut(s) 155
XceI RCATGY 4 cut(s) 328, 581, 689, 1234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.