Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000681

Physical Location & Seq

Genomic Coordinates Reverse (-)

16359331 .. 16363878

Gene Structure 4548 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G40840.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGTTTTACTCGCATTGTCTAGTATCGAGAAAAGGACCTTTAGGAGCTATTTGGGTCGCTGCCTATTTCTTCAAAAAGCTTAAGAAATCTCAAGTCAAAGCTACTCATATTCCTTCTTCCGTTGATCAAATCTTGCAAAAAGAGTTAGATGCGTTGACATACAGAGTTTTGGCGTATCTTCTTCTTGGTGTTGTAAGGATATATTCCAAGAAGGTTGACTTTTTGTTCGATGATTGCAATAAAGCGTTGATCGGTGTAAAGGAGTTTGTGGCTAAGGAAAGGAACAGAGAAAAGACAGGTGTATCATTGCCTGCATCTATCGAGTGTTTTTCCATTGCTTTACCTGAGAGATTTGAACTAGATGCTTTTGATCTTGGGGTTCTGGAGGATTTTCATGGGGGAAATGTTAAGCCGCATGAAGATATTACACTTAAAGATGGAAGTCAGGAAACAGAGCGCATGGACATGTATTCGATGGAAAGGTTTGACATGGAAGAGGACCTTCTGTTTACGTTTCATGAGACTTTCTCTACCAATCATAATGAAAATAAACATGAGAGTTTTGCTCATGATATGGAATTGGATGCAGAAAATGTCAGAGATACCACTGAAGAAGCATCCGTCAGAGTCGTTGAAGCGGAACCACTGGATTCTAATGAACCATCCAGAGATCATCAAAATGCATCTAGGCATAGAGAGGATCCAGAATCAGATGACATTCTTCTGGAACCGCAAATGTCCGAAGATATCCGAATAGCTCAAGAAGAAGATACAGTTAGAGAAACCATATGTACCATTGTGCAGAGACTAGTGGATTCTCATGAATCCTCAGGAGATAATCTACACAGAGATGGTCACACAGAGAATTTAGAATCGGAGAAAACCTCGAAGAAAACAAGTTGCGAAGAGATGCAGCATGACAGGTCCCTCCCATCTGAATGCGGAATACCTGAAGCAATTCATGGGATTGAGGATCAACCTTCTGGTGCCACAAGAATTAATGGGGAGAAGGAGATCCCTGAGATGAGTACTCTAGAAAAACCAGAACCAGTATCTGTGACTGGTTCCAGAGACTTGCAAGAAGGCGTAGAAAAATGTCGAGACCATAATGAAGCGGAAATGGCAGACTTTGAATTGTTTCATGGGTCTCATAAAGAGCAATCTGAAACTTCTGAAGTGAATCTCCATGGTTCCGAGAAAGGTTTTCTCTCTGACATGACTGTTTCTAAAGACCCTAGTAGCGAATTTAATGCAACAGATACTCCAGTTACTGTCACTCCCAAAACACCTTCCCGGTTGAAAATTTCTGAAGGGGGAACAAGTCCACAGTTCTCGATCATCCCTACGCCGGCTGCGAAGGAGTCTTCTCGAGTTTCACGGAAAAGAAAATGTCTGATAGATGATGAAGTGATAATTCCGAACAAAGTTATGAAGGAAATGATAGAGGACTCAAGTAAATTGCTTGCAAAACGGAGAAACGTACCTCATACTGACTGTCCTGAGAGGAGAACCAAACGTTTTGCCAATCCTTTTCGAAGTTTTTTGGAACCTTTGATTCAGTATGGTTCTTCGGACCTCCAGTCGCTTTTTTGTCAACCCATCAAGCTTAAAAACTGGGCAACCACAGGAACCCCTAAAGATACTAAAATCGCTAGACATAAGGAAAAGTCTTCTCTTGACACTGTCAGATCTCCTGGGGTTATTTTATCTTCAGATCAGACTGAGAATACTCAAGAAATTATGGAGACTCCTCAGGCTGCTGCTCTCGCTGGGCTGAAAGTGACAGCCGGAAATAGTAACGTGGTTTCGGTTGAGATGGGAGCAAGTTCTACAACTTCTGGAACTGCTCATCAAACAGAAAATGCCGCAGAGACACCTGTGAAGCCTTCAGTTATTGCTCCAGAAACACCCGTGAGGACATCAGAGCAAACAGTGATTGCTCCAGAAACACCAGTAGTCTCTGAGCAAGTAGAGATTGCACCTGAAACGCCGGTGAGGGAATCAATGTCGAAAAGATTTTTCAAGGACCCTGGGACCTGTTATAAAAAATCCAGACCTGCAAGTCCCTTCACTTCCTTTGAGGAGCACCCGTCTGTGTATTATGTGGAAAATAGAGATCTTGATACGATTTTAATGAACGATGAGGTGAATGCAGATGAAAGACAGGACTTACAACAAGAGACATGGTCCTCAAGAACAAGGAATGTGGCGAAATTCTTGGAAAAGACGTTTTTGGAACAGAGGGAAAGAGAAGAAGAAGAGAAGGTGAGTTTGTTGCAACTGTGTAGAGGAAGAACTCAGAAGGAAAGCGCAAGACTCTTCTACGAGACTTTGGTGTTGAAGACCAAAGGATACGTGGAAGTGAAGCAAAATCATCCATATAGTGATGTTTTTCTCATGCGTGTTTCCAGACCACAAAAAGCTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

809

Amino Acids

91.33

Weight (kDa)

5.19

Isoelectric Point (pI)

53.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	1 - 94	4.4e-25	N terminus of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840
fragaria_vesca	FvH4_6g53040 FvH4_6g53040 FvH4_6g53050 FvH4_6g53050
malus_domestica	MD09G1015100.v1.1 MD09G1015200.v1.1 MD17G1015200.v1.1
prunus_persica	Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1
pyrus_communis	pycom111g01230 pycom17g01230 pycom17g01240
rosa_chinensis	RchiOBHm_Chr2g0146031 RchiOBHm_Chr2g0172041 RchiOBHm_Chr2g0172061 RchiOBHm_Chr2g0172121 RchiOBHm_Chr2g0172131 RchiOBHm_Chr2g0172161 RchiOBHm_Chr2g0173841 RchiOBHm_Chr2g0174821 RchiOBHm_Chr2g0174831
rosa_laevigata	RLG00000022078 RLG00000022079 RLG00000022228 RLG00000022298 RLG00000022299 RLG00000032768
rosa_multiflora	Rmu_co8137076.1_g000001 Rmu_sc0001716.1_g000038 Rmu_sc0003188.1_g000021 Rmu_sc0015734.1_g000001 Rmu_sc0038259.1_g000001 Rmu_sc0038259.1_g000002 Rmu_sc0040737.1_g000001 Rmu_sc0041600.1_g000001 Rmu_ssc0000252.1_g000045
rosa_roxburghii	Rroxscaffold_2G00077660 Rroxscaffold_2G00080120 Rroxscaffold_2G00080130 Rroxscaffold_2G00080290
rosa_rugosa	Rorug02G0579500 Rorug02G0579600
rosa_samantha	Rh2AG632100 Rh2AG632200 Rh2AG656700 Rh2AG656800 Rh2AG660800 Rh2AG660900 Rh2BG645600 Rh2BG645700 Rh2BG667700 Rh2BG667800 Rh2BG672200 Rh2BG672300 Rh2CG627800 Rh2CG627900 Rh2CG635000 Rh2CG635100 Rh2DG658600 Rh2DG678300 Rh2DG685300 Rh2DG685400 Rh6AG066100 Rh6BG058900
rosa_wichuraiana	Rw2G053570 Rw2G054150 Rw2G054160 Rw6G005810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2043
AasI	GACNNNNNNGTC	1 cut(s)	2061
Acc36I	ACCTGC	1 cut(s)	2065
AccB1I	GGYRCC	1 cut(s)	986
AciI	CCGC	6 cut(s)	413, 638, 731, 942, 1115, 1866
AclI	AACGTT	1 cut(s)	1516
AclWI	GGATC	4 cut(s)	695, 708, 981, 1009
AcsI	RAATTY	4 cut(s)	865, 1244, 1302, 2213
AcuI	CTGAAG	6 cut(s)	630, 972, 1194, 1329, 1695, 1872
AfaI	GTAC	3 cut(s)	793, 1030, 1482
AfiI	CCNNNNNNNGG	1 cut(s)	1348
AflII	CTTAAG	1 cut(s)	80
AflIII	ACRYGT	1 cut(s)	465
AgsI	TTSAA	7 cut(s)	73, 356, 635, 1133, 1300, 2023, 2341
AhdI	GACNNNNNGTC	1 cut(s)	1579
AhlI	ACTAGT	1 cut(s)	808
AjnI	CCWGG	2 cut(s)	1693, 2029
AluBI	AGCT	6 cut(s)	47, 79, 101, 758, 1606, 2423
AluI	AGCT	6 cut(s)	47, 79, 101, 758, 1606, 2423
Alw21I	GWGCWC	1 cut(s)	2088
AlwI	GGATC	4 cut(s)	695, 708, 981, 1009
AlwNI	CAGNNNCTG	2 cut(s)	1055, 1271
Ama87I	CYCGRG	1 cut(s)	1368
ApeKI	GCWGC	5 cut(s)	59, 913, 1352, 1757, 1760
ApoI	RAATTY	4 cut(s)	865, 1244, 1302, 2213
ArsI	GACNNNNNNTTYG	2 cut(s)	209, 241
AseI	ATTAAT	1 cut(s)	999
Asp700I	GAANNNNTTC	2 cut(s)	957, 1137
AspLEI	GCGC	2 cut(s)	459, 2312
AspS9I	GGNCC	7 cut(s)	35, 499, 924, 1573, 2026, 2034, 2187
AsuC2I	CCSGG	1 cut(s)	1294
AsuHPI	GGTGA	3 cut(s)	2005, 2158, 2278
AsuII	TTCGAA	1 cut(s)	1534
AvaI	CYCGRG	1 cut(s)	1368
AvaII	GGWCC	7 cut(s)	35, 499, 924, 1573, 2026, 2034, 2187
AxyI	CCTNAGG	2 cut(s)	829, 1752
BaeI	ACNNNNGTAYC	4 cut(s)	285, 318, 1251, 1284
BamHI	GGATCC	1 cut(s)	700
BanI	GGYRCC	1 cut(s)	986
BbsI	GAAGAC	3 cut(s)	1356, 1662, 2348
Bbv12I	GWGCWC	1 cut(s)	2088
BbvI	GCAGC	5 cut(s)	46, 925, 1339, 1744, 1747
BccI	CCATC	7 cut(s)	431, 469, 670, 845, 940, 1607, 1810
BcgI	CGANNNNNNTGC	2 cut(s)	1232, 1266
BciT130I	CCWGG	2 cut(s)	1695, 2031
BciVI	GTATCC	1 cut(s)	2345
BclI	TGATCA	1 cut(s)	124
BcnI	CCSGG	1 cut(s)	1294
BcuI	ACTAGT	1 cut(s)	808
BfaI	CTAG	7 cut(s)	20, 359, 687, 809, 1034, 1236, 1653
BfrI	CTTAAG	1 cut(s)	80
BfuAI	ACCTGC	1 cut(s)	2065
BfuI	GTATCC	1 cut(s)	2345
BglII	AGATCT	2 cut(s)	1688, 2116
BisI	GCNGC	7 cut(s)	60, 413, 914, 1353, 1758, 1761, 1866
BlsI	GCNGC	7 cut(s)	61, 414, 915, 1354, 1759, 1762, 1867
BmcAI	AGTACT	1 cut(s)	1030
Bme1390I	CCNGG	3 cut(s)	1294, 1695, 2031
Bme18I	GGWCC	7 cut(s)	35, 499, 924, 1573, 2026, 2034, 2187
BmeRI	GACNNNNNGTC	1 cut(s)	1579
BmeT110I	CYCGRG	1 cut(s)	1368
BmgT120I	GGNCC	7 cut(s)	35, 499, 924, 1573, 2026, 2034, 2187
BmrFI	CCNGG	3 cut(s)	1294, 1695, 2031
BmrI	ACTGGG	1 cut(s)	1624
BmsI	GCATC	7 cut(s)	139, 323, 352, 574, 626, 692, 900
BmuI	ACTGGG	1 cut(s)	1624
BpiI	GAAGAC	3 cut(s)	1356, 1662, 2348
BplI	GAGNNNNNCTC	6 cut(s)	512, 544, 550, 582, 869, 901
BpmI	CTGGAG	5 cut(s)	404, 1248, 1562, 1884, 1926
Bpu10I	CCTNAGC	1 cut(s)	273
Bpu14I	TTCGAA	1 cut(s)	1534
BpuEI	CTTGAG	5 cut(s)	75, 744, 1435, 1716, 2176
BpuMI	CCSGG	1 cut(s)	1294
BsaAI	YACGTR	1 cut(s)	2356
BsaI	GGTCTC	2 cut(s)	1095, 1152
BsaJI	CCNNGG	4 cut(s)	1186, 1694, 2029, 2030
BsaXI	ACNNNNNCTCC	6 cut(s)	1246, 1261, 1276, 1291, 2075, 2105
Bsc4I	CCNNNNNNNGG	1 cut(s)	1348
Bse118I	RCCGGY	2 cut(s)	1348, 1990
Bse1I	ACTGG	7 cut(s)	651, 1049, 1066, 1265, 1579, 1619, 1952
Bse21I	CCTNAGG	2 cut(s)	829, 1752
Bse3DI	GCAATG	2 cut(s)	305, 333
BseBI	CCWGG	2 cut(s)	1695, 2031
BseDI	CCNNGG	4 cut(s)	1186, 1694, 2029, 2030
BseGI	GGATG	5 cut(s)	589, 617, 662, 1338, 2374
BseLI	CCNNNNNNNGG	1 cut(s)	1348
BseMI	GCAATG	2 cut(s)	305, 333
BseMII	CTCAG	8 cut(s)	336, 843, 1011, 1491, 1713, 1766, 1953, 2312
BseNI	ACTGG	7 cut(s)	651, 1049, 1066, 1265, 1579, 1619, 1952
BseRI	GAGGAG	3 cut(s)	1519, 1740, 2096
BseXI	GCAGC	5 cut(s)	46, 925, 1339, 1744, 1747
BseYI	CCCAGC	1 cut(s)	1769
BsgI	GTGCAG	1 cut(s)	821
BshNI	GGYRCC	1 cut(s)	986
BsiHKAI	GWGCWC	1 cut(s)	2088
BsiHKCI	CYCGRG	1 cut(s)	1368
BsiSI	CCGG	4 cut(s)	1294, 1349, 1788, 1991
BslFI	GGGAC	3 cut(s)	910, 2047, 2049
BslI	CCNNNNNNNGG	1 cut(s)	1348
BsmFI	GGGAC	3 cut(s)	910, 2047, 2049
BsmI	GAATGC	2 cut(s)	944, 2155
Bso31I	GGTCTC	2 cut(s)	1095, 1152
BsoBI	CYCGRG	1 cut(s)	1368
Bsp119I	TTCGAA	1 cut(s)	1534
Bsp1286I	GDGCHC	1 cut(s)	2088
Bsp19I	CCATGG	1 cut(s)	1186
BspACI	CCGC	6 cut(s)	413, 638, 731, 942, 1115, 1866
BspCNI	CTCAG	8 cut(s)	337, 842, 1012, 1492, 1714, 1765, 1954, 2311
BspHI	TCATGA	3 cut(s)	517, 568, 820
BspMI	ACCTGC	1 cut(s)	2065
BspPI	GGATC	4 cut(s)	695, 708, 981, 1009
BspT104I	TTCGAA	1 cut(s)	1534
BspT107I	GGYRCC	1 cut(s)	986
BspTI	CTTAAG	1 cut(s)	80
BspTNI	GGTCTC	2 cut(s)	1095, 1152
BsrDI	GCAATG	2 cut(s)	305, 333
BsrFI	RCCGGY	2 cut(s)	1348, 1990
BsrI	ACTGG	7 cut(s)	651, 1049, 1066, 1265, 1579, 1619, 1952
BssAI	RCCGGY	2 cut(s)	1348, 1990
BssECI	CCNNGG	4 cut(s)	1186, 1694, 2029, 2030
BssT1I	CCWWGG	1 cut(s)	1186
Bst2UI	CCWGG	2 cut(s)	1695, 2031
Bst4CI	ACNGT	8 cut(s)	775, 1222, 1273, 1329, 1496, 1684, 1933, 2283
Bst6I	CTCTTC	4 cut(s)	489, 900, 2253, 2324
BstAFI	CTTAAG	1 cut(s)	80
BstBAI	YACGTR	1 cut(s)	2356
BstBI	TTCGAA	1 cut(s)	1534
BstC8I	GCNNGC	3 cut(s)	312, 1350, 1464
BstDEI	CTNAG	9 cut(s)	273, 345, 829, 1020, 1500, 1722, 1752, 1962, 2298
BstDSI	CCRYGG	1 cut(s)	1186
BstF5I	GGATG	5 cut(s)	589, 617, 662, 1338, 2374
BstHHI	GCGC	2 cut(s)	459, 2312
BstMWI	GCNNNNNNNGC	2 cut(s)	1121, 1766
BstNI	CCWGG	2 cut(s)	1695, 2031
BstNSI	RCATGY	1 cut(s)	469
BstSCI	CCNGG	3 cut(s)	1292, 1693, 2029
BstV1I	GCAGC	5 cut(s)	46, 925, 1339, 1744, 1747
BstV2I	GAAGAC	3 cut(s)	1356, 1662, 2348
BstX2I	RGATCY	4 cut(s)	700, 1014, 1688, 2116
BstYI	RGATCY	4 cut(s)	700, 1014, 1688, 2116
Bsu36I	CCTNAGG	2 cut(s)	829, 1752
BsuI	GTATCC	1 cut(s)	2345
BtgI	CCRYGG	1 cut(s)	1186
BtsCI	GGATG	5 cut(s)	589, 617, 662, 1338, 2374
BtsIMutI	CAGTG	4 cut(s)	606, 644, 1680, 1938
BveI	ACCTGC	1 cut(s)	2065
Cac8I	GCNNGC	3 cut(s)	312, 1350, 1464
CaiI	CAGNNNCTG	2 cut(s)	1055, 1271
CciI	TCATGA	3 cut(s)	517, 568, 820
CfoI	GCGC	2 cut(s)	459, 2312
Cfr10I	RCCGGY	2 cut(s)	1348, 1990
Cfr13I	GGNCC	7 cut(s)	35, 499, 924, 1573, 2026, 2034, 2187
Csp6I	GTAC	3 cut(s)	792, 1029, 1481
CspCI	CAANNNNNGTGG	2 cut(s)	2187, 2222
CviQI	GTAC	3 cut(s)	792, 1029, 1481
DdeI	CTNAG	9 cut(s)	273, 345, 829, 1020, 1500, 1722, 1752, 1962, 2298
DrdI	GACNNNNNNGTC	1 cut(s)	2061
DriI	GACNNNNNGTC	1 cut(s)	1579
DseDI	GACNNNNNNGTC	1 cut(s)	2061
Eam1104I	CTCTTC	4 cut(s)	489, 900, 2253, 2324
Eam1105I	GACNNNNNGTC	1 cut(s)	1579
EarI	CTCTTC	4 cut(s)	489, 900, 2253, 2324
Eco130I	CCWWGG	1 cut(s)	1186
Eco31I	GGTCTC	2 cut(s)	1095, 1152
Eco32I	GATATC	1 cut(s)	748
Eco47I	GGWCC	7 cut(s)	35, 499, 924, 1573, 2026, 2034, 2187
Eco57I	CTGAAG	6 cut(s)	630, 972, 1194, 1329, 1695, 1872
Eco81I	CCTNAGG	2 cut(s)	829, 1752
Eco88I	CYCGRG	1 cut(s)	1368
EcoO109I	RGGNCCY	5 cut(s)	35, 499, 924, 2026, 2034
EcoRII	CCWGG	2 cut(s)	1693, 2029
EcoRV	GATATC	1 cut(s)	748
EcoT14I	CCWWGG	1 cut(s)	1186
EcoT22I	ATGCAT	1 cut(s)	685
ErhI	CCWWGG	1 cut(s)	1186
FalI	AAGNNNNNCTT	4 cut(s)	203, 235, 486, 518
FaqI	GGGAC	3 cut(s)	910, 2047, 2049
FauNDI	CATATG	1 cut(s)	788
FbaI	TGATCA	1 cut(s)	124
Fnu4HI	GCNGC	7 cut(s)	60, 413, 914, 1353, 1758, 1761, 1866
FokI	GGATG	5 cut(s)	596, 604, 649, 1325, 2361
Fsp4HI	GCNGC	7 cut(s)	60, 413, 914, 1353, 1758, 1761, 1866
FspBI	CTAG	7 cut(s)	20, 359, 687, 809, 1034, 1236, 1653
GlaI	GCGC	2 cut(s)	458, 2311
GluI	GCNGC	7 cut(s)	60, 413, 914, 1353, 1758, 1761, 1866
GsaI	CCCAGC	1 cut(s)	1773
GsuI	CTGGAG	5 cut(s)	404, 1248, 1562, 1884, 1926
HapII	CCGG	4 cut(s)	1294, 1349, 1788, 1991
HhaI	GCGC	2 cut(s)	459, 2312
Hin6I	GCGC	2 cut(s)	457, 2310
HinP1I	GCGC	2 cut(s)	457, 2310
HincII	GTYRAC	3 cut(s)	156, 217, 1595
HindII	GTYRAC	3 cut(s)	156, 217, 1595
HindIII	AAGCTT	3 cut(s)	77, 1604, 2421
HpaII	CCGG	4 cut(s)	1294, 1349, 1788, 1991
HphI	GGTGA	3 cut(s)	2005, 2158, 2278
Hpy166II	GTNNAC	5 cut(s)	156, 217, 510, 1325, 1595
Hpy8I	GTNNAC	5 cut(s)	156, 217, 510, 1325, 1595
HpyCH4III	ACNGT	8 cut(s)	775, 1222, 1273, 1329, 1496, 1684, 1933, 2283
HpyCH4IV	ACGT	6 cut(s)	512, 1479, 1516, 1800, 2228, 2355
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1121, 1766
HpyF3I	CTNAG	9 cut(s)	273, 345, 829, 1020, 1500, 1722, 1752, 1962, 2298
HpySE526I	ACGT	6 cut(s)	512, 1479, 1516, 1800, 2228, 2355
HspAI	GCGC	2 cut(s)	457, 2310
KroI	GCCGGC	1 cut(s)	1348
KroNI	GCCGGC	1 cut(s)	1350
Ksp22I	TGATCA	1 cut(s)	124
LmnI	GCTCC	5 cut(s)	44, 1820, 1903, 1945, 2083
Lsp1109I	GCAGC	5 cut(s)	46, 925, 1339, 1744, 1747
LweI	GCATC	7 cut(s)	139, 323, 352, 574, 626, 692, 900
MaeI	CTAG	7 cut(s)	20, 359, 687, 809, 1034, 1236, 1653
MaeII	ACGT	6 cut(s)	512, 1479, 1516, 1800, 2228, 2355
MaeIII	GTNAC	6 cut(s)	854, 1057, 1267, 1273, 1780, 1796
MflI	RGATCY	4 cut(s)	700, 1014, 1688, 2116
MhlI	GDGCHC	1 cut(s)	2088
MlyI	GAGTC	5 cut(s)	636, 1370, 1442, 1741, 2310
Mph1103I	ATGCAT	1 cut(s)	685
MroNI	GCCGGC	1 cut(s)	1348
MroXI	GAANNNNTTC	2 cut(s)	957, 1137
MseI	TTAA	7 cut(s)	81, 408, 432, 999, 1248, 1608, 2132
MslI	CAYNNNNRTG	4 cut(s)	464, 678, 849, 937
MspCI	CTTAAG	1 cut(s)	80
MspI	CCGG	4 cut(s)	1294, 1349, 1788, 1991
MspR9I	CCNGG	3 cut(s)	1294, 1695, 2031
Mva1269I	GAATGC	2 cut(s)	944, 2155
MvaI	CCWGG	2 cut(s)	1695, 2031
MwoI	GCNNNNNNNGC	2 cut(s)	1121, 1766
NaeI	GCCGGC	1 cut(s)	1350
NciI	CCSGG	1 cut(s)	1294
NcoI	CCATGG	1 cut(s)	1186
NdeI	CATATG	1 cut(s)	788
NgoMIV	GCCGGC	1 cut(s)	1348
NmuCI	GTSAC	4 cut(s)	854, 1057, 1273, 1780
NsiI	ATGCAT	1 cut(s)	685
NspI	RCATGY	1 cut(s)	469
NspV	TTCGAA	1 cut(s)	1534
PaeR7I	CTCGAG	1 cut(s)	1368
PagI	TCATGA	3 cut(s)	517, 568, 820
PasI	CCCWGGG	1 cut(s)	2030
PciI	ACATGT	1 cut(s)	465
PcsI	WCGNNNNNNNCGW	1 cut(s)	1352
PctI	GAATGC	2 cut(s)	944, 2155
PdiI	GCCGGC	1 cut(s)	1350
PdmI	GAANNNNTTC	2 cut(s)	957, 1137
PfeI	GAWTC	8 cut(s)	650, 707, 815, 824, 872, 1180, 1555, 2000
PflFI	GACNNNGTC	2 cut(s)	1682, 2185
PkrI	GCNGC	7 cut(s)	61, 414, 915, 1354, 1759, 1762, 1867
PleI	GAGTC	5 cut(s)	635, 1369, 1442, 1741, 2310
PpsI	GAGTC	5 cut(s)	635, 1369, 1442, 1741, 2310
Ppu21I	YACGTR	1 cut(s)	2356
PpuMI	RGGWCCY	5 cut(s)	35, 499, 924, 2026, 2034
PscI	ACATGT	1 cut(s)	465
PshBI	ATTAAT	1 cut(s)	999
PsiI	TTATAA	1 cut(s)	2043
Psp1406I	AACGTT	1 cut(s)	1516
Psp5II	RGGWCCY	5 cut(s)	35, 499, 924, 2026, 2034
Psp6I	CCWGG	2 cut(s)	1693, 2029
PspFI	CCCAGC	1 cut(s)	1769
PspGI	CCWGG	2 cut(s)	1693, 2029
PspPI	GGNCC	7 cut(s)	35, 499, 924, 1573, 2026, 2034, 2187
PspPPI	RGGWCCY	5 cut(s)	35, 499, 924, 2026, 2034
PstNI	CAGNNNCTG	2 cut(s)	1055, 1271
PsuI	RGATCY	4 cut(s)	700, 1014, 1688, 2116
PsyI	GACNNNGTC	2 cut(s)	1682, 2185
RsaI	GTAC	3 cut(s)	793, 1030, 1482
RsaNI	GTAC	3 cut(s)	792, 1029, 1481
RseI	CAYNNNNRTG	4 cut(s)	464, 678, 849, 937
SaqAI	TTAA	7 cut(s)	81, 408, 432, 999, 1248, 1608, 2132
SatI	GCNGC	7 cut(s)	60, 413, 914, 1353, 1758, 1761, 1866
Sau96I	GGNCC	7 cut(s)	35, 499, 924, 1573, 2026, 2034, 2187
ScaI	AGTACT	1 cut(s)	1030
SchI	GAGTC	5 cut(s)	636, 1370, 1442, 1741, 2310
ScrFI	CCNGG	3 cut(s)	1294, 1695, 2031
SduI	GDGCHC	1 cut(s)	2088
SfaNI	GCATC	7 cut(s)	139, 323, 352, 574, 626, 692, 900
Sfr274I	CTCGAG	1 cut(s)	1368
SfuI	TTCGAA	1 cut(s)	1534
SgrAI	CRCCGGYG	1 cut(s)	1990
SinI	GGWCC	7 cut(s)	35, 499, 924, 1573, 2026, 2034, 2187
SlaI	CTCGAG	1 cut(s)	1368
SmiMI	CAYNNNNRTG	4 cut(s)	464, 678, 849, 937
SmlI	CTYRAG	7 cut(s)	80, 90, 759, 1368, 1450, 1731, 2191
SmoI	CTYRAG	7 cut(s)	80, 90, 759, 1368, 1450, 1731, 2191
SpeI	ACTAGT	1 cut(s)	808
SsiI	CCGC	6 cut(s)	413, 638, 731, 942, 1115, 1866
SspMI	CTAG	7 cut(s)	20, 359, 687, 809, 1034, 1236, 1653
StyD4I	CCNGG	3 cut(s)	1292, 1693, 2029
StyI	CCWWGG	1 cut(s)	1186
TaaI	ACNGT	8 cut(s)	775, 1222, 1273, 1329, 1496, 1684, 1933, 2283
TaiI	ACGT	6 cut(s)	515, 1482, 1519, 1803, 2231, 2358
TatI	WGTACW	1 cut(s)	1028
TauI	GCSGC	2 cut(s)	415, 1868
TfiI	GAWTC	8 cut(s)	650, 707, 815, 824, 872, 1180, 1555, 2000
Tru1I	TTAA	7 cut(s)	81, 408, 432, 999, 1248, 1608, 2132
Tru9I	TTAA	7 cut(s)	81, 408, 432, 999, 1248, 1608, 2132
TscAI	CASTG	4 cut(s)	613, 651, 1687, 1938
TseFI	GTSAC	4 cut(s)	854, 1057, 1273, 1780
TseI	GCWGC	5 cut(s)	59, 913, 1352, 1757, 1760
Tsp45I	GTSAC	4 cut(s)	854, 1057, 1273, 1780
TspGWI	ACGGA	4 cut(s)	109, 610, 1393, 1486
TspRI	CASTG	4 cut(s)	613, 651, 1687, 1938
Tth111I	GACNNNGTC	2 cut(s)	1682, 2185
Vha464I	CTTAAG	1 cut(s)	80
VpaK11BI	GGWCC	7 cut(s)	35, 499, 924, 1573, 2026, 2034, 2187
VspI	ATTAAT	1 cut(s)	999
XapI	RAATTY	4 cut(s)	865, 1244, 1302, 2213
XbaI	TCTAGA	1 cut(s)	1033
XceI	RCATGY	1 cut(s)	469
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2353
XhoI	CTCGAG	1 cut(s)	1368
XmnI	GAANNNNTTC	2 cut(s)	957, 1137
XspI	CTAG	7 cut(s)	20, 359, 687, 809, 1034, 1236, 1653
ZrmI	AGTACT	1 cut(s)	1030
Zsp2I	ATGCAT	1 cut(s)	685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.