Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000681

Physical Location & Seq

Genomic Coordinates Reverse (-)

87305084 .. 87310372

Gene Structure 5289 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ54197

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

ATGGTCTATTCACAGAGCTTGTTAGCAAGAAGAGGGCCTTTGGGCGCCATATGGGTCGCTGCTTACTGTTTCAAGAAGCTCAAGAAGACCCAGATCACAGAGACTGACATTTTGGCCGCTATTGATAAAATTTTAAAGGATGAATGGGATGGTGTCGCATATAGAGTACTAGCCTACCTACTTCTGGGTGTTGTTCGAATATACTTGAGGAAAGTTGAATATCTTTTTGATGACTGCAATGAAGTGCTACTAGACATCAAGAAATTTGTGTTTAGCACAAAAGACAATGCACCTGCAGAAATGCTGTGTGCGGCTGATCACTCTGTTATCATACCGGATAGGTTTGAGCTTGATGCCTTTGATATGGGGAGCCTTGAAGATGTCAGTGGTGAACATTTGGCGTCTCACAAAGAAATCACGCTTAAAGAATGTGCAGAGTGGAATGGAATAGGACGACTTTCATCAGAAATGTATGATCATATGGAATTTGGTGCCTGCCACAGTATTTTCTCAACTTATTACACCCCAGTCAGAAGTGTACTTTCATCTCACCTGATGAACTTTGGTATGGAGTTAATAACATCGAGTAGTGGAGCTAATGCGGAAGAAATCATAGAGCAGCTTCAATGGCATAGGTTCTCTCAAGAAGAATGTGCCGACATTGATACATTTATTGGCATTGAGAAAGAGCCTCAAAACCAAGTTAAGCAACATGGTGAAGATAATGAAACCAATGGAGAGCAGATAAAGACTCCAGATATAGCAGTGCCTGAAGATGGAATTCAGGAAGATGGTCAGAAGACTCAGAAGCATGAGATCATTTATGGGAATAATATAGAACCTTCCCGCCATGTGATAACTGGTGAGGATCATCAAAGTGAACGAGAGGAGATGATGGAAATAGACTTGGTGCAACCAGAAAATCAGAGTTTTCAGATTACAAAAGAAGAGCATAGTCTAAGAAACTTAGAAGCTGACATGGAGAATAGGAAAAATGCTACATTTTCTCAAGAAGAATCCCTGGACCTTGATGTGCTTTCTGGGGCCAAGAAACCTCAAGAACTTGTTTGTTCATATGGAGAAGAGAATCATAATGATGAAGAGCCGACTAAGTTACAGGACATAACACCAGATACCATGAAAAATATTCCACAAGAAGATCCAGATCCCCTTTCAGTTGCATATGATGGCAGTCCTGACACCAAGCAGCCAGATGCTCTAGGTATTACTACACCAAAATTGACGGCTGTTCCCAGACCAGTTTCCAAGAAATCGGATCGGTTTTCTAGGAAAAGAAAATGTGTCTTTGATGATATAGTAGTGCTGCCTAATGAGGTAATCAGGCAAAGCATACATGATGCTAGTGATTTGGTTGCTAAAAGAAAAAAAGTTCCCAAAAATGCCCATGCTGTTTGGAAAACTTGTCAAATTGGAAATCTTGCCCAGAATTTCTTGGAGCCATTGATATCTAACATTTCGCAAGAGCTTAGATCCCTCTTATGCAAAAGGAAACTGAGGAAATTAAAGATCACTCCAGAGAAGTTAGATTTGTTGGACTGTCAAAGGACTGGTATATCAGAGCAAATGGAGGTTGTACATACAGAAACCGTTGAACCTGCAGAAGACTTGGATGTGTTAGAATATCCATGTACTGTTGGATTAGAACAAGCAGAAATTGCACCAGACACACCTGTCCTTCGCTCAAAATCAATCAAATCATTTCATAGTCCCAGGAGTCCTGAAGTTCCTGAAGTTCCTGATATGGATCTAGTAAGACCTGAGACATCTGGAAGGATAGAAAAAGAACCGTCTATGGGAGCAGAGCAAACTTTCCCTTCTGGAAGTGTAGAAGAAGTACCACCATCTCTAGATAGGGATGACGAGCATGACTTCAATTTTTTGAGTGAGGAAGCTGAATTTTGCGAAGGAGTTAATCCTGAACTCGATGGGTGTTCGGTGAGAACCAGAAAGGTGGCGAGATACTTGCACAGGCACTTTACAATTTGCAACAGTCTCCACGTGAACTTGTTGGAGGTTGCAGAACGAAGAACCAAGAAAGAAAGTGCAAGGCTATTCTATGAGACACTGGTGATGAAAACTAGAGGGTTTGTGGATGTGAAGCAAGCTGATCCCTATGGCGACATTCTAATCTGGAAACTTCCCAAATGGGATCAAATGTGGGGAGATGATACCTCCCATAGAGTCACTTCTGAAACTATGTCTCTATGTCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

744

Amino Acids

84.54

Weight (kDa)

4.93

Isoelectric Point (pI)

47.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	1 - 94	4.6e-25	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	674 - 717	8.3e-15	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840
fragaria_vesca	FvH4_6g53040 FvH4_6g53040 FvH4_6g53050 FvH4_6g53050
malus_domestica	MD09G1015100.v1.1 MD09G1015200.v1.1 MD17G1015200.v1.1
prunus_persica	Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1
pyrus_communis	pycom111g01230 pycom17g01230 pycom17g01240
rosa_chinensis	RchiOBHm_Chr2g0146031 RchiOBHm_Chr2g0172041 RchiOBHm_Chr2g0172061 RchiOBHm_Chr2g0172121 RchiOBHm_Chr2g0172131 RchiOBHm_Chr2g0172161 RchiOBHm_Chr2g0173841 RchiOBHm_Chr2g0174821 RchiOBHm_Chr2g0174831
rosa_laevigata	RLG00000022078 RLG00000022079 RLG00000022228 RLG00000022298 RLG00000022299 RLG00000032768
rosa_multiflora	Rmu_co8137076.1_g000001 Rmu_sc0001716.1_g000038 Rmu_sc0003188.1_g000021 Rmu_sc0015734.1_g000001 Rmu_sc0038259.1_g000001 Rmu_sc0038259.1_g000002 Rmu_sc0040737.1_g000001 Rmu_sc0041600.1_g000001 Rmu_ssc0000252.1_g000045
rosa_roxburghii	Rroxscaffold_2G00077660 Rroxscaffold_2G00080120 Rroxscaffold_2G00080130 Rroxscaffold_2G00080290
rosa_rugosa	Rorug02G0579500 Rorug02G0579600
rosa_samantha	Rh2AG632100 Rh2AG632200 Rh2AG656700 Rh2AG656800 Rh2AG660800 Rh2AG660900 Rh2BG645600 Rh2BG645700 Rh2BG667700 Rh2BG667800 Rh2BG672200 Rh2BG672300 Rh2CG627800 Rh2CG627900 Rh2CG635000 Rh2CG635100 Rh2DG658600 Rh2DG678300 Rh2DG685300 Rh2DG685400 Rh6AG066100 Rh6BG058900
rosa_wichuraiana	Rw2G053570 Rw2G054150 Rw2G054160 Rw6G005810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	301
AasI	GACNNNNNNGTC	1 cut(s)	1691
Acc36I	ACCTGC	2 cut(s)	301, 1624
AccB1I	GGYRCC	2 cut(s)	44, 491
AciI	CCGC	4 cut(s)	117, 311, 602, 847
AclWI	GGATC	8 cut(s)	876, 1154, 1160, 1284, 1485, 1773, 2123, 2178
AcoI	YGGCCR	1 cut(s)	114
AcsI	RAATTY	6 cut(s)	129, 263, 485, 780, 1447, 1916
AcuI	CTGAAG	3 cut(s)	792, 1761, 1770
AcvI	CACGTG	1 cut(s)	2020
AcyI	GRCGYC	2 cut(s)	45, 401
AfaI	GTAC	5 cut(s)	168, 540, 1596, 1651, 1857
AfiI	CCNNNNNNNGG	3 cut(s)	184, 776, 1814
AgsI	TTSAA	6 cut(s)	73, 218, 377, 626, 1613, 1894
AjnI	CCWGG	2 cut(s)	1020, 1730
AluBI	AGCT	9 cut(s)	18, 79, 349, 596, 622, 974, 1486, 1913, 2126
AluI	AGCT	9 cut(s)	18, 79, 349, 596, 622, 974, 1486, 1913, 2126
Alw26I	GTCTC	6 cut(s)	95, 408, 1775, 2018, 2075, 2226
AlwI	GGATC	8 cut(s)	876, 1154, 1160, 1284, 1485, 1773, 2123, 2178
AlwNI	CAGNNNCTG	2 cut(s)	104, 770
AoxI	GGCC	3 cut(s)	35, 114, 1044
ApeKI	GCWGC	4 cut(s)	59, 619, 1207, 1324
ApoI	RAATTY	6 cut(s)	129, 263, 485, 780, 1447, 1916
ArsI	GACNNNNNNTTYG	2 cut(s)	94, 126
AspLEI	GCGC	1 cut(s)	47
AspS9I	GGNCC	3 cut(s)	35, 1024, 1044
AsuHPI	GGTGA	6 cut(s)	401, 542, 728, 875, 1969, 2101
AsuII	TTCGAA	1 cut(s)	196
AvaII	GGWCC	1 cut(s)	1024
BanI	GGYRCC	2 cut(s)	44, 491
BbrPI	CACGTG	1 cut(s)	2020
BbsI	GAAGAC	3 cut(s)	92, 806, 1629
BbvI	GCAGC	4 cut(s)	46, 631, 1219, 1311
BccI	CCATC	7 cut(s)	143, 770, 785, 889, 1181, 1870, 1940
BceAI	ACGGC	1 cut(s)	1260
BcgI	CGANNNNNNTGC	2 cut(s)	1966, 2000
BciT130I	CCWGG	2 cut(s)	1022, 1732
BclI	TGATCA	2 cut(s)	316, 475
BcoDI	GTCTC	6 cut(s)	95, 408, 1775, 2018, 2075, 2226
BfaI	CTAG	8 cut(s)	170, 251, 1220, 1287, 1362, 1769, 1868, 2100
BfmI	CTRYAG	2 cut(s)	294, 1617
BfoI	RGCGCY	1 cut(s)	48
BfuAI	ACCTGC	2 cut(s)	301, 1624
BisI	GCNGC	6 cut(s)	60, 117, 312, 620, 1208, 1325
BlsI	GCNGC	6 cut(s)	61, 118, 313, 621, 1209, 1326
BmcAI	AGTACT	1 cut(s)	168
Bme1390I	CCNGG	2 cut(s)	1022, 1732
Bme18I	GGWCC	1 cut(s)	1024
BmgT120I	GGNCC	3 cut(s)	35, 1024, 1044
BmiI	GGNNCC	5 cut(s)	46, 371, 493, 1045, 1458
BmrFI	CCNGG	2 cut(s)	1022, 1732
BmrI	ACTGGG	1 cut(s)	521
BmsI	GCATC	3 cut(s)	343, 1204, 1348
BmuI	ACTGGG	1 cut(s)	521
BpiI	GAAGAC	3 cut(s)	92, 806, 1629
BpmI	CTGGAG	2 cut(s)	738, 1518
Bpu14I	TTCGAA	1 cut(s)	196
BpuEI	CTTGAG	5 cut(s)	65, 226, 627, 993, 1041
BsaAI	YACGTR	1 cut(s)	2020
BsaBI	GATNNNNATC	2 cut(s)	1164, 1764
BsaHI	GRCGYC	2 cut(s)	45, 401
BsaJI	CCNNGG	2 cut(s)	1020, 1730
BsaWI	WCCGGW	1 cut(s)	334
Bsc4I	CCNNNNNNNGG	3 cut(s)	184, 776, 1814
Bse1I	ACTGG	5 cut(s)	527, 865, 1259, 1573, 2091
Bse3DI	GCAATG	1 cut(s)	244
Bse8I	GATNNNNATC	2 cut(s)	1164, 1764
BseBI	CCWGG	2 cut(s)	1022, 1732
BseDI	CCNNGG	2 cut(s)	1020, 1730
BseGI	GGATG	5 cut(s)	145, 154, 1636, 1882, 2119
BseJI	GATNNNNATC	2 cut(s)	1164, 1764
BseLI	CCNNNNNNNGG	3 cut(s)	184, 776, 1814
BseMI	GCAATG	1 cut(s)	244
BseMII	CTCAG	3 cut(s)	818, 1505, 1770
BseNI	ACTGG	5 cut(s)	527, 865, 1259, 1573, 2091
BseRI	GAGGAG	1 cut(s)	902
BseXI	GCAGC	4 cut(s)	46, 631, 1219, 1311
BsgI	GTGCAG	1 cut(s)	453
BshFI	GGCC	3 cut(s)	37, 116, 1046
BshNI	GGYRCC	2 cut(s)	44, 491
BsiSI	CCGG	1 cut(s)	335
BslFI	GGGAC	1 cut(s)	1713
BslI	CCNNNNNNNGG	3 cut(s)	184, 776, 1814
BsmAI	GTCTC	6 cut(s)	95, 408, 1775, 2018, 2075, 2226
BsmBI	CGTCTC	1 cut(s)	408
BsmFI	GGGAC	1 cut(s)	1713
BsnI	GGCC	3 cut(s)	37, 116, 1046
Bsp119I	TTCGAA	1 cut(s)	196
Bsp1407I	TGTACA	1 cut(s)	1594
BspACI	CCGC	4 cut(s)	117, 311, 602, 847
BspANI	GGCC	3 cut(s)	37, 116, 1046
BspCNI	CTCAG	3 cut(s)	817, 1506, 1771
BspLI	GGNNCC	5 cut(s)	46, 371, 493, 1045, 1458
BspMAI	CTGCAG	2 cut(s)	298, 1621
BspMI	ACCTGC	2 cut(s)	301, 1624
BspPI	GGATC	8 cut(s)	876, 1154, 1160, 1284, 1485, 1773, 2123, 2178
BspQI	GCTCTTC	2 cut(s)	942, 1095
BspT104I	TTCGAA	1 cut(s)	196
BspT107I	GGYRCC	2 cut(s)	44, 491
BsrDI	GCAATG	1 cut(s)	244
BsrGI	TGTACA	1 cut(s)	1594
BsrI	ACTGG	5 cut(s)	527, 865, 1259, 1573, 2091
BssECI	CCNNGG	2 cut(s)	1020, 1730
BssNI	GRCGYC	2 cut(s)	45, 401
Bst2UI	CCWGG	2 cut(s)	1022, 1732
Bst4CI	ACNGT	7 cut(s)	68, 503, 1559, 1609, 1654, 1809, 2012
Bst6I	CTCTTC	4 cut(s)	25, 942, 1077, 1095
BstACI	GRCGYC	2 cut(s)	45, 401
BstAPI	GCANNNNNTGC	1 cut(s)	1676
BstAUI	TGTACA	1 cut(s)	1594
BstBAI	YACGTR	1 cut(s)	2020
BstBI	TTCGAA	1 cut(s)	196
BstC8I	GCNNGC	2 cut(s)	496, 2124
BstDEI	CTNAG	7 cut(s)	804, 959, 967, 1110, 1487, 1514, 1779
BstF5I	GGATG	5 cut(s)	145, 154, 1636, 1882, 2119
BstH2I	RGCGCY	1 cut(s)	48
BstHHI	GCGC	1 cut(s)	47
BstMAI	GTCTC	6 cut(s)	95, 408, 1775, 2018, 2075, 2226
BstMWI	GCNNNNNNNGC	2 cut(s)	628, 1676
BstNI	CCWGG	2 cut(s)	1022, 1732
BstSCI	CCNGG	2 cut(s)	1020, 1730
BstSFI	CTRYAG	2 cut(s)	294, 1617
BstV1I	GCAGC	4 cut(s)	46, 631, 1219, 1311
BstV2I	GAAGAC	3 cut(s)	92, 806, 1629
BstX2I	RGATCY	4 cut(s)	1159, 1165, 1490, 1765
BstXI	CCANNNNNNTGG	1 cut(s)	1972
BstYI	RGATCY	4 cut(s)	1159, 1165, 1490, 1765
BsuRI	GGCC	3 cut(s)	37, 116, 1046
BtsCI	GGATG	5 cut(s)	145, 154, 1636, 1882, 2119
BtsI	GCAGTG	1 cut(s)	771
BtsIMutI	CAGTG	3 cut(s)	391, 771, 2084
BveI	ACCTGC	2 cut(s)	301, 1624
Cac8I	GCNNGC	2 cut(s)	496, 2124
CaiI	CAGNNNCTG	2 cut(s)	104, 770
CfoI	GCGC	1 cut(s)	47
Cfr13I	GGNCC	3 cut(s)	35, 1024, 1044
CseI	GACGC	1 cut(s)	390
Csp6I	GTAC	5 cut(s)	167, 539, 1595, 1650, 1856
CviAII	CATG	9 cut(s)	713, 812, 851, 979, 1138, 1355, 1406, 1647, 1886
CviQI	GTAC	5 cut(s)	167, 539, 1595, 1650, 1856
DdeI	CTNAG	7 cut(s)	804, 959, 967, 1110, 1487, 1514, 1779
DinI	GGCGCC	1 cut(s)	46
DraI	TTTAAA	1 cut(s)	135
DrdI	GACNNNNNNGTC	1 cut(s)	1691
DseDI	GACNNNNNNGTC	1 cut(s)	1691
EaeI	YGGCCR	1 cut(s)	114
Eam1104I	CTCTTC	4 cut(s)	25, 942, 1077, 1095
EarI	CTCTTC	4 cut(s)	25, 942, 1077, 1095
Eco32I	GATATC	1 cut(s)	1467
Eco47I	GGWCC	1 cut(s)	1024
Eco57I	CTGAAG	3 cut(s)	792, 1761, 1770
Eco72I	CACGTG	1 cut(s)	2020
EcoO109I	RGGNCCY	1 cut(s)	35
EcoRI	GAATTC	1 cut(s)	780
EcoRII	CCWGG	2 cut(s)	1020, 1730
EcoRV	GATATC	1 cut(s)	1467
EgeI	GGCGCC	1 cut(s)	46
EheI	GGCGCC	1 cut(s)	46
Esp3I	CGTCTC	1 cut(s)	408
FaeI	CATG	9 cut(s)	716, 815, 854, 982, 1141, 1358, 1409, 1650, 1889
FalI	AAGNNNNNCTT	2 cut(s)	22, 54
FaqI	GGGAC	1 cut(s)	1713
FatI	CATG	9 cut(s)	712, 811, 850, 978, 1137, 1354, 1405, 1646, 1885
FauI	CCCGC	1 cut(s)	854
FauNDI	CATATG	4 cut(s)	50, 480, 1075, 1183
FbaI	TGATCA	2 cut(s)	316, 475
Fnu4HI	GCNGC	6 cut(s)	60, 117, 312, 620, 1208, 1325
FokI	GGATG	5 cut(s)	152, 161, 1643, 1889, 2126
Fsp4HI	GCNGC	6 cut(s)	60, 117, 312, 620, 1208, 1325
FspBI	CTAG	8 cut(s)	170, 251, 1220, 1287, 1362, 1769, 1868, 2100
GlaI	GCGC	1 cut(s)	46
GluI	GCNGC	6 cut(s)	60, 117, 312, 620, 1208, 1325
GsuI	CTGGAG	2 cut(s)	738, 1518
HaeII	RGCGCY	1 cut(s)	48
HaeIII	GGCC	3 cut(s)	37, 116, 1046
HapII	CCGG	1 cut(s)	335
HgaI	GACGC	1 cut(s)	390
HhaI	GCGC	1 cut(s)	47
Hin1I	GRCGYC	2 cut(s)	45, 401
Hin1II	CATG	9 cut(s)	716, 815, 854, 982, 1141, 1358, 1409, 1650, 1889
Hin6I	GCGC	1 cut(s)	45
HinP1I	GCGC	1 cut(s)	45
HinfI	GANTC	6 cut(s)	751, 802, 1016, 1087, 1735, 2202
HpaII	CCGG	1 cut(s)	335
HphI	GGTGA	6 cut(s)	401, 542, 728, 875, 1969, 2101
Hpy166II	GTNNAC	4 cut(s)	392, 539, 881, 2023
Hpy188I	TCNGA	9 cut(s)	466, 533, 798, 807, 927, 936, 1276, 1579, 2212
Hpy8I	GTNNAC	4 cut(s)	392, 539, 881, 2023
HpyAV	CCTTC	5 cut(s)	852, 1706, 1785, 1845, 1919
HpyCH4III	ACNGT	7 cut(s)	68, 503, 1559, 1609, 1654, 1809, 2012
HpyCH4IV	ACGT	1 cut(s)	2019
HpyF10VI	GCNNNNNNNGC	2 cut(s)	628, 1676
HpyF3I	CTNAG	7 cut(s)	804, 959, 967, 1110, 1487, 1514, 1779
HpySE526I	ACGT	1 cut(s)	2019
Hsp92I	GRCGYC	2 cut(s)	45, 401
Hsp92II	CATG	9 cut(s)	716, 815, 854, 982, 1141, 1358, 1409, 1650, 1889
HspAI	GCGC	1 cut(s)	45
KasI	GGCGCC	1 cut(s)	44
Ksp22I	TGATCA	2 cut(s)	316, 475
LguI	GCTCTTC	2 cut(s)	942, 1095
LmnI	GCTCC	4 cut(s)	369, 593, 1456, 1817
Lsp1109I	GCAGC	4 cut(s)	46, 631, 1219, 1311
LweI	GCATC	3 cut(s)	343, 1204, 1348
MaeI	CTAG	8 cut(s)	170, 251, 1220, 1287, 1362, 1769, 1868, 2100
MaeII	ACGT	1 cut(s)	2019
MaeIII	GTNAC	2 cut(s)	1113, 2203
MflI	RGATCY	4 cut(s)	1159, 1165, 1490, 1765
Mly113I	GGCGCC	1 cut(s)	45
MlyI	GAGTC	4 cut(s)	745, 796, 1744, 2211
MmeI	TCCRAC	3 cut(s)	1533, 1636, 2010
MseI	TTAA	6 cut(s)	134, 423, 575, 705, 1523, 1932
MslI	CAYNNNNRTG	2 cut(s)	876, 1095
MspI	CCGG	1 cut(s)	335
MspR9I	CCNGG	2 cut(s)	1022, 1732
MvaI	CCWGG	2 cut(s)	1022, 1732
MwoI	GCNNNNNNNGC	2 cut(s)	628, 1676
NarI	GGCGCC	1 cut(s)	45
NdeI	CATATG	4 cut(s)	50, 480, 1075, 1183
NlaIII	CATG	9 cut(s)	716, 815, 854, 982, 1141, 1358, 1409, 1650, 1889
NlaIV	GGNNCC	5 cut(s)	46, 371, 493, 1045, 1458
NmuCI	GTSAC	1 cut(s)	2203
NspV	TTCGAA	1 cut(s)	196
PaqCI	CACCTGC	1 cut(s)	301
PciSI	GCTCTTC	2 cut(s)	942, 1095
PfeI	GAWTC	2 cut(s)	1016, 1087
PkrI	GCNGC	6 cut(s)	61, 118, 313, 621, 1209, 1326
PleI	GAGTC	4 cut(s)	745, 796, 1743, 2210
PluTI	GGCGCC	1 cut(s)	48
PmaCI	CACGTG	1 cut(s)	2020
PmlI	CACGTG	1 cut(s)	2020
PpsI	GAGTC	4 cut(s)	745, 796, 1743, 2210
Ppu21I	YACGTR	1 cut(s)	2020
Psp6I	CCWGG	2 cut(s)	1020, 1730
PspCI	CACGTG	1 cut(s)	2020
PspGI	CCWGG	2 cut(s)	1020, 1730
PspN4I	GGNNCC	5 cut(s)	46, 371, 493, 1045, 1458
PspPI	GGNCC	3 cut(s)	35, 1024, 1044
PstI	CTGCAG	2 cut(s)	298, 1621
PstNI	CAGNNNCTG	2 cut(s)	104, 770
PsuI	RGATCY	4 cut(s)	1159, 1165, 1490, 1765
RsaI	GTAC	5 cut(s)	168, 540, 1596, 1651, 1857
RsaNI	GTAC	5 cut(s)	167, 539, 1595, 1650, 1856
RseI	CAYNNNNRTG	2 cut(s)	876, 1095
SapI	GCTCTTC	2 cut(s)	942, 1095
SaqAI	TTAA	6 cut(s)	134, 423, 575, 705, 1523, 1932
SatI	GCNGC	6 cut(s)	60, 117, 312, 620, 1208, 1325
Sau96I	GGNCC	3 cut(s)	35, 1024, 1044
ScaI	AGTACT	1 cut(s)	168
SchI	GAGTC	4 cut(s)	745, 796, 1744, 2211
ScrFI	CCNGG	2 cut(s)	1022, 1732
SfaNI	GCATC	3 cut(s)	343, 1204, 1348
SfcI	CTRYAG	2 cut(s)	294, 1617
SfoI	GGCGCC	1 cut(s)	46
SfuI	TTCGAA	1 cut(s)	196
SinI	GGWCC	1 cut(s)	1024
SmiMI	CAYNNNNRTG	2 cut(s)	876, 1095
SmlI	CTYRAG	5 cut(s)	80, 205, 642, 1008, 1056
SmoI	CTYRAG	5 cut(s)	80, 205, 642, 1008, 1056
SsiI	CCGC	4 cut(s)	117, 311, 602, 847
SspDI	GGCGCC	1 cut(s)	44
SspI	AATATT	1 cut(s)	1147
SspMI	CTAG	8 cut(s)	170, 251, 1220, 1287, 1362, 1769, 1868, 2100
StyD4I	CCNGG	2 cut(s)	1020, 1730
TaaI	ACNGT	7 cut(s)	68, 503, 1559, 1609, 1654, 1809, 2012
TaiI	ACGT	1 cut(s)	2022
TaqI	TCGA	4 cut(s)	196, 584, 1944, 2230
TatI	WGTACW	4 cut(s)	166, 538, 1594, 1649
TauI	GCSGC	2 cut(s)	119, 314
TfiI	GAWTC	2 cut(s)	1016, 1087
Tru1I	TTAA	6 cut(s)	134, 423, 575, 705, 1523, 1932
Tru9I	TTAA	6 cut(s)	134, 423, 575, 705, 1523, 1932
TscAI	CASTG	3 cut(s)	391, 771, 2091
TseFI	GTSAC	1 cut(s)	2203
TseI	GCWGC	4 cut(s)	59, 619, 1207, 1324
Tsp45I	GTSAC	1 cut(s)	2203
TspRI	CASTG	3 cut(s)	391, 771, 2091
VpaK11BI	GGWCC	1 cut(s)	1024
XapI	RAATTY	6 cut(s)	129, 263, 485, 780, 1447, 1916
XbaI	TCTAGA	1 cut(s)	1867
XcmI	CCANNNNNNNNNTGG	1 cut(s)	857
XspI	CTAG	8 cut(s)	170, 251, 1220, 1287, 1362, 1769, 1868, 2100
ZrmI	AGTACT	1 cut(s)	168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.