Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000681

Physical Location & Seq

Genomic Coordinates Reverse (-)

87299290 .. 87304349

Gene Structure 5060 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ54196

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGTTTTACTCACAGTGTCTCTTATCAAGAAAAGGGCGTTTAGGCTCCATATGGGTTGCTGCCTATTGTTTCAAAAAGCTCAAGAAGGCCCAGGTCGCTGAAACTGACATTTCAGCCTCTGTTGATAAAATTTTGAAGGATGATTGGGATGTCATCGCATATAGGGTACTAGCCTACCTTCTTCTTGGTGTTGTTCGAATATACTCAAAAAAAGTTGAATACCTTTTTGATGACTGCCACGAAGTGCTAACTGAAATCAACAAGTTTGTTGTTAGCACAAAAGAGAAGGGAGACACAGATACATTTTGTGCGCCTTATGACTCTGTTACCCTACCAGAGAGGTTTGAACTTGATGCATTTGATTTGGGACTTCCTGAAGATGTCAGTGGAGGAAATGAAGTATCCTACGAAGCTATCACACTTAAAGATTGTCCAAAGGGAAATGTAGGACAATTTTCATCAGATATGTATGATTACGAGGAATTTGGTCCCTGCCGTGGTATCTTTTCTGCCAATTACATTCCAGGCAGAGATGTACTTTCATATGACGGGATGGAATTGGATATGGAGTTAAGGACGTCGAGGAGTGGAGCTAACCCAGAAGTAAACATGGAGAATCCTCAAGAGAGTAGGTTCTCTCAAGTAGAAACTAATGGAGAACAGATAAAGGTTCCGGATATAGCATTGTCTGAAGGTGGGACTCTAGGAGAAGCAAGGCAGGAAAAGCTTCCAGACCTTAGGTCTGAGGAAAAAGGTCTGAACCATGAAACATTTTTTGGCATTGAAGAAGAGCCCCTAAACCAAGTTGAACCATTTGGTGAAGATCACGAAATTAATGGGGAGCAAATAAAGGCTCCTGCTGTAGTCCAGTCTGTTGATGGAATTCAAGAAGAGGCAAGCCTGGAACCTTCCTGTCATGTTACATCATCTGGTGAAGATCACCACATTATTCGAGAGGAGATTATCATGCAATCAGAAAATCAAATGTGTCCAGTTACAAGAGAAGACCACAATCTAAGCAACTTGGAAGCTGACAGGGGAAACCTGAAAAGTTGTACACCTGCTCTAGAAGAGAACATGGACCTTGATAAGTCTTGTGACTTAAAGAAACCTGAAAAACCTGTTTGTTCATATGGGGAAGAGAATCATAAGGATGGAGAGCCGACAAAGTTACAGGACACGATTCCACCAGATAATGTGAATTGTCAAATTACTGCTGGAAAAGATTCAGAGGCTTTAGTTGTTACTACACCAAAGTTAAGGAGGGTTATTCCCACACCAGCTATGAGGAAGGCTACTCAAATCTCCAGGAAAAGGAAAAAGAAATGTACCTTTGATGAAATGGTAGTGCTGCCTAATACGGTAATCAAGCGAAGCATAAATGATGCGAGTGACTTGGTTTCAAAAAGAAGAAAGGTTCCTGAAACTGCCCTTGCTGCCTGGAAAACCTGTCAGCTTAGAAACCTATCCCGGAATTTCTTGGAACCATTGATACCTAGTGTTTCAGAGGAGCTTAGGTCGCTCTTCCACAAAAGCATAATAGAATCTGCTGAAACTGTTGAACCTCCAGAAAAGCTAGATGTGTTAGAACCTCCAAGTACTGGTAGACCAGAGCAAGTAGAAACTTCACCAGGGCCACCTGTCCTTGAGCAAATAGAAATTGAGCCTGGAACCCCTATCCTTGAGAAAATAGAAATTGCACCAGGAACGCCTGTCCTTCACTCAACATCAATGAAATCATTCAATAGTCCAAAGAGCCCCGAAGCTCGTGATATGGATATGGTGATACCTGAGCCATCCGGAAGGATAGAGGAAGAGCCATCTATGGGAAATGAACAAGCTTACCCATCTGAAAGTGTAGAAGTACCATCTTTGGACAAGGTTCAAGAGCATGATTTCAATTTATTGAATGAGGAACCTGATTTATGTGAGGGAGTTAACCCTGAACTGGATGGGTGGTCAAAGAGAACCAGAGTGGTTGCAAGGTACTTGCATAGAGAATTCACAAATTGTAAAAATCGAGGAGAGGAGGAAGTGAACTTGTTGCAGGTTTCAGAAGGAAAAACCAAGAAAGAAAGTGCAAGGTTGTTCTATGAGACACTGGTGTTGAGAACTAATGGGTATGTGGATGTGAAGCAAGATGAAGCCTATGGTGACATTCTACTCCGTAAGCTCCACAAATGGGATCAAACATGGGAAGACGATACGGTCAACAGAGACAGCTTCGAACCTATGGATTCATGTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

749

Amino Acids

84.3

Weight (kDa)

4.74

Isoelectric Point (pI)

54.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	1 - 96	1.8e-26	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	676 - 723	2.7e-17	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840
fragaria_vesca	FvH4_6g53040 FvH4_6g53040 FvH4_6g53050 FvH4_6g53050
malus_domestica	MD09G1015100.v1.1 MD09G1015200.v1.1 MD17G1015200.v1.1
prunus_persica	Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1
pyrus_communis	pycom111g01230 pycom17g01230 pycom17g01240
rosa_chinensis	RchiOBHm_Chr2g0146031 RchiOBHm_Chr2g0172041 RchiOBHm_Chr2g0172061 RchiOBHm_Chr2g0172121 RchiOBHm_Chr2g0172131 RchiOBHm_Chr2g0172161 RchiOBHm_Chr2g0173841 RchiOBHm_Chr2g0174821 RchiOBHm_Chr2g0174831
rosa_laevigata	RLG00000022078 RLG00000022079 RLG00000022228 RLG00000022298 RLG00000022299 RLG00000032768
rosa_multiflora	Rmu_co8137076.1_g000001 Rmu_sc0001716.1_g000038 Rmu_sc0003188.1_g000021 Rmu_sc0015734.1_g000001 Rmu_sc0038259.1_g000001 Rmu_sc0038259.1_g000002 Rmu_sc0040737.1_g000001 Rmu_sc0041600.1_g000001 Rmu_ssc0000252.1_g000045
rosa_roxburghii	Rroxscaffold_2G00077660 Rroxscaffold_2G00080120 Rroxscaffold_2G00080130 Rroxscaffold_2G00080290
rosa_rugosa	Rorug02G0579500 Rorug02G0579600
rosa_samantha	Rh2AG632100 Rh2AG632200 Rh2AG656700 Rh2AG656800 Rh2AG660800 Rh2AG660900 Rh2BG645600 Rh2BG645700 Rh2BG667700 Rh2BG667800 Rh2BG672200 Rh2BG672300 Rh2CG627800 Rh2CG627900 Rh2CG635000 Rh2CG635100 Rh2DG658600 Rh2DG678300 Rh2DG685300 Rh2DG685400 Rh6AG066100 Rh6BG058900
rosa_wichuraiana	Rw2G053570 Rw2G054150 Rw2G054160 Rw6G005810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1069
AasI	GACNNNNNNGTC	1 cut(s)	2207
AatII	GACGTC	1 cut(s)	581
Acc36I	ACCTGC	2 cut(s)	1069, 2038
AccB7I	CCANNNNNTGG	1 cut(s)	1601
AccI	GTMKAC	1 cut(s)	1606
AccIII	TCCGGA	2 cut(s)	673, 1799
AclWI	GGATC	1 cut(s)	2193
AcsI	RAATTY	5 cut(s)	129, 482, 882, 1474, 2000
AcuI	CTGAAG	2 cut(s)	396, 711
AcyI	GRCGYC	1 cut(s)	578
AdeI	CACNNNGTG	1 cut(s)	244
AfaI	GTAC	7 cut(s)	168, 537, 1057, 1330, 1600, 1866, 1988
AfiI	CCNNNNNNNGG	6 cut(s)	497, 1314, 1601, 1826, 1948, 2182
AhdI	GACNNNNNGTC	1 cut(s)	739
AjnI	CCWGG	8 cut(s)	90, 523, 900, 1307, 1439, 1630, 1666, 1702
AjuI	GAANNNNNNNTTGG	2 cut(s)	759, 791
Alw26I	GTCTC	4 cut(s)	23, 285, 2090, 2211
AlwI	GGATC	1 cut(s)	2193
AlwNI	CAGNNNCTG	1 cut(s)	119
Aor13HI	TCCGGA	2 cut(s)	673, 1799
AoxI	GGCC	2 cut(s)	87, 1634
ApeKI	GCWGC	3 cut(s)	59, 1351, 1436
ApoI	RAATTY	5 cut(s)	129, 482, 882, 1474, 2000
AseI	ATTAAT	1 cut(s)	834
Asp700I	GAANNNNTTC	3 cut(s)	726, 1225, 1739
AspLEI	GCGC	1 cut(s)	313
AspS9I	GGNCC	4 cut(s)	88, 488, 1081, 1634
AsuC2I	CCSGG	1 cut(s)	1471
AsuHPI	GGTGA	6 cut(s)	830, 932, 944, 1620, 1795, 2165
AsuII	TTCGAA	2 cut(s)	196, 2226
AvaII	GGWCC	2 cut(s)	488, 1081
AxyI	CCTNAGG	1 cut(s)	737
BanII	GRGCYC	2 cut(s)	795, 1760
BauI	CACGAG	1 cut(s)	1767
BbsI	GAAGAC	2 cut(s)	1011, 2205
BbvI	GCAGC	3 cut(s)	46, 1338, 1423
BccI	CCATC	8 cut(s)	547, 872, 1148, 1804, 1828, 1855, 1876, 1946
BceAI	ACGGC	1 cut(s)	480
BciT130I	CCWGG	8 cut(s)	92, 525, 902, 1309, 1441, 1632, 1668, 1704
BciVI	GTATCC	1 cut(s)	412
BcnI	CCSGG	1 cut(s)	1471
BcoDI	GTCTC	4 cut(s)	23, 285, 2090, 2211
BfaI	CTAG	5 cut(s)	170, 704, 1067, 1497, 1577
BfmI	CTRYAG	1 cut(s)	861
BfuAI	ACCTGC	2 cut(s)	1069, 2038
BfuI	GTATCC	1 cut(s)	412
BisI	GCNGC	3 cut(s)	60, 1352, 1437
BlsI	GCNGC	3 cut(s)	61, 1353, 1438
BmcAI	AGTACT	1 cut(s)	1600
Bme1390I	CCNGG	9 cut(s)	92, 525, 902, 1309, 1441, 1471, 1632, 1668, 1704
Bme18I	GGWCC	2 cut(s)	488, 1081
BmeRI	GACNNNNNGTC	1 cut(s)	739
BmgT120I	GGNCC	4 cut(s)	88, 488, 1081, 1634
BmiI	GGNNCC	9 cut(s)	46, 490, 672, 855, 906, 1419, 1485, 1672, 1917
BmrFI	CCNGG	9 cut(s)	92, 525, 902, 1309, 1441, 1471, 1632, 1668, 1704
BmsI	GCATC	2 cut(s)	343, 1375
BpiI	GAAGAC	2 cut(s)	1011, 2205
BpmI	CTGGAG	2 cut(s)	1291, 1551
Bpu10I	CCTNAGC	2 cut(s)	1514, 1791
Bpu14I	TTCGAA	2 cut(s)	196, 2226
BpuEI	CTTGAG	5 cut(s)	65, 606, 624, 1667, 1703
BpuMI	CCSGG	1 cut(s)	1471
BsaHI	GRCGYC	1 cut(s)	578
BsaJI	CCNNGG	3 cut(s)	90, 496, 1631
BsaWI	WCCGGW	2 cut(s)	673, 1799
BsaXI	ACNNNNNCTCC	2 cut(s)	1502, 1532
Bsc4I	CCNNNNNNNGG	6 cut(s)	497, 1314, 1601, 1826, 1948, 2182
Bse1I	ACTGG	5 cut(s)	868, 992, 1606, 1953, 2106
Bse21I	CCTNAGG	1 cut(s)	737
BseAI	TCCGGA	2 cut(s)	673, 1799
BseBI	CCWGG	8 cut(s)	92, 525, 902, 1309, 1441, 1632, 1668, 1704
BseDI	CCNNGG	3 cut(s)	90, 496, 1631
BseGI	GGATG	7 cut(s)	145, 154, 558, 1159, 1796, 1957, 2134
BseLI	CCNNNNNNNGG	6 cut(s)	497, 1314, 1601, 1826, 1948, 2182
BseMII	CTCAG	2 cut(s)	735, 1782
BseNI	ACTGG	5 cut(s)	868, 992, 1606, 1953, 2106
BseRI	GAGGAG	5 cut(s)	598, 971, 1523, 2037, 2042
BseXI	GCAGC	3 cut(s)	46, 1338, 1423
BshFI	GGCC	2 cut(s)	89, 1636
BsiSI	CCGG	3 cut(s)	674, 1471, 1800
BslFI	GGGAC	3 cut(s)	381, 474, 712
BslI	CCNNNNNNNGG	6 cut(s)	497, 1314, 1601, 1826, 1948, 2182
BsmAI	GTCTC	4 cut(s)	23, 285, 2090, 2211
BsmFI	GGGAC	3 cut(s)	381, 474, 712
BsnI	GGCC	2 cut(s)	89, 1636
Bsp119I	TTCGAA	2 cut(s)	196, 2226
Bsp1286I	GDGCHC	2 cut(s)	795, 1760
Bsp13I	TCCGGA	2 cut(s)	673, 1799
Bsp1407I	TGTACA	1 cut(s)	1055
Bsp143I	GATC	3 cut(s)	823, 937, 2185
BspANI	GGCC	2 cut(s)	89, 1636
BspCNI	CTCAG	2 cut(s)	736, 1783
BspEI	TCCGGA	2 cut(s)	673, 1799
BspLI	GGNNCC	9 cut(s)	46, 490, 672, 855, 906, 1419, 1485, 1672, 1917
BspMI	ACCTGC	2 cut(s)	1069, 2038
BspPI	GGATC	1 cut(s)	2193
BspQI	GCTCTTC	3 cut(s)	783, 1529, 1809
BspT104I	TTCGAA	2 cut(s)	196, 2226
BsrGI	TGTACA	1 cut(s)	1055
BsrI	ACTGG	5 cut(s)	868, 992, 1606, 1953, 2106
BssECI	CCNNGG	3 cut(s)	90, 496, 1631
BssMI	GATC	3 cut(s)	823, 937, 2185
BssNI	GRCGYC	1 cut(s)	578
BssSI	CACGAG	1 cut(s)	1767
Bst2BI	CACGAG	1 cut(s)	1767
Bst2UI	CCWGG	8 cut(s)	92, 525, 902, 1309, 1441, 1632, 1668, 1704
Bst4CI	ACNGT	4 cut(s)	15, 1363, 1558, 2209
Bst6I	CTCTTC	6 cut(s)	783, 885, 1065, 1134, 1529, 1809
BstACI	GRCGYC	1 cut(s)	578
BstAUI	TGTACA	1 cut(s)	1055
BstBI	TTCGAA	2 cut(s)	196, 2226
BstC8I	GCNNGC	1 cut(s)	898
BstDEI	CTNAG	6 cut(s)	737, 744, 1016, 1457, 1514, 1791
BstDSI	CCRYGG	1 cut(s)	496
BstF5I	GGATG	7 cut(s)	145, 154, 558, 1159, 1796, 1957, 2134
BstHHI	GCGC	1 cut(s)	313
BstKTI	GATC	3 cut(s)	826, 940, 2188
BstMAI	GTCTC	4 cut(s)	23, 285, 2090, 2211
BstMBI	GATC	3 cut(s)	823, 937, 2185
BstMWI	GCNNNNNNNGC	4 cut(s)	95, 724, 1436, 1519
BstNI	CCWGG	8 cut(s)	92, 525, 902, 1309, 1441, 1632, 1668, 1704
BstSCI	CCNGG	9 cut(s)	90, 523, 900, 1307, 1439, 1469, 1630, 1666, 1702
BstSFI	CTRYAG	1 cut(s)	861
BstV1I	GCAGC	3 cut(s)	46, 1338, 1423
BstV2I	GAAGAC	2 cut(s)	1011, 2205
Bsu36I	CCTNAGG	1 cut(s)	737
BsuI	GTATCC	1 cut(s)	412
BsuRI	GGCC	2 cut(s)	89, 1636
BtgI	CCRYGG	1 cut(s)	496
BtgZI	GCGATG	1 cut(s)	139
BtsCI	GGATG	7 cut(s)	145, 154, 558, 1159, 1796, 1957, 2134
BtsIMutI	CAGTG	3 cut(s)	20, 391, 2099
BveI	ACCTGC	2 cut(s)	1069, 2038
Cac8I	GCNNGC	1 cut(s)	898
CaiI	CAGNNNCTG	1 cut(s)	119
CfoI	GCGC	1 cut(s)	313
Cfr13I	GGNCC	4 cut(s)	88, 488, 1081, 1634
Csp6I	GTAC	7 cut(s)	167, 536, 1056, 1329, 1599, 1865, 1987
CviAII	CATG	8 cut(s)	610, 764, 917, 967, 1078, 1892, 2193, 2241
CviQI	GTAC	7 cut(s)	167, 536, 1056, 1329, 1599, 1865, 1987
DdeI	CTNAG	6 cut(s)	737, 744, 1016, 1457, 1514, 1791
DpnI	GATC	3 cut(s)	825, 939, 2187
DpnII	GATC	3 cut(s)	823, 937, 2185
DraIII	CACNNNGTG	1 cut(s)	244
DrdI	GACNNNNNNGTC	1 cut(s)	2207
DriI	GACNNNNNGTC	1 cut(s)	739
DseDI	GACNNNNNNGTC	1 cut(s)	2207
Eam1104I	CTCTTC	6 cut(s)	783, 885, 1065, 1134, 1529, 1809
Eam1105I	GACNNNNNGTC	1 cut(s)	739
EarI	CTCTTC	6 cut(s)	783, 885, 1065, 1134, 1529, 1809
Eco24I	GRGCYC	2 cut(s)	795, 1760
Eco47I	GGWCC	2 cut(s)	488, 1081
Eco57I	CTGAAG	2 cut(s)	396, 711
Eco81I	CCTNAGG	1 cut(s)	737
EcoRI	GAATTC	2 cut(s)	882, 2000
EcoRII	CCWGG	8 cut(s)	90, 523, 900, 1307, 1439, 1630, 1666, 1702
EcoT22I	ATGCAT	1 cut(s)	358
EcoT38I	GRGCYC	2 cut(s)	795, 1760
FaeI	CATG	8 cut(s)	613, 767, 920, 970, 1081, 1895, 2196, 2244
FaqI	GGGAC	3 cut(s)	381, 474, 712
FatI	CATG	8 cut(s)	609, 763, 916, 966, 1077, 1891, 2192, 2240
FauNDI	CATATG	3 cut(s)	50, 544, 1132
FblI	GTMKAC	1 cut(s)	1606
Fnu4HI	GCNGC	3 cut(s)	60, 1352, 1437
FokI	GGATG	7 cut(s)	152, 161, 565, 1166, 1783, 1964, 2141
FriOI	GRGCYC	2 cut(s)	795, 1760
Fsp4HI	GCNGC	3 cut(s)	60, 1352, 1437
FspBI	CTAG	5 cut(s)	170, 704, 1067, 1497, 1577
GlaI	GCGC	1 cut(s)	312
GluI	GCNGC	3 cut(s)	60, 1352, 1437
GsuI	CTGGAG	2 cut(s)	1291, 1551
HaeIII	GGCC	2 cut(s)	89, 1636
HapII	CCGG	3 cut(s)	674, 1471, 1800
HhaI	GCGC	1 cut(s)	313
Hin1I	GRCGYC	1 cut(s)	578
Hin1II	CATG	8 cut(s)	613, 767, 920, 970, 1081, 1895, 2196, 2244
Hin6I	GCGC	1 cut(s)	311
HinP1I	GCGC	1 cut(s)	311
HincII	GTYRAC	2 cut(s)	1939, 2212
HindII	GTYRAC	2 cut(s)	1939, 2212
HindIII	AAGCTT	2 cut(s)	725, 1839
HinfI	GANTC	8 cut(s)	320, 616, 700, 1144, 1183, 1226, 1544, 2237
HpaI	GTTAAC	1 cut(s)	1939
HpaII	CCGG	3 cut(s)	674, 1471, 1800
HphI	GGTGA	6 cut(s)	830, 932, 944, 1620, 1795, 2165
Hpy166II	GTNNAC	6 cut(s)	607, 1058, 1607, 1939, 2038, 2212
Hpy188I	TCNGA	9 cut(s)	463, 691, 745, 759, 976, 1231, 1507, 1852, 2056
Hpy8I	GTNNAC	6 cut(s)	607, 1058, 1607, 1939, 2038, 2212
Hpy99I	CGWCG	1 cut(s)	583
HpyCH4III	ACNGT	4 cut(s)	15, 1363, 1558, 2209
HpyCH4IV	ACGT	1 cut(s)	578
HpyCH4V	TGCA	8 cut(s)	356, 970, 1700, 1982, 1993, 2047, 2081, 2246
HpyF10VI	GCNNNNNNNGC	4 cut(s)	95, 724, 1436, 1519
HpyF3I	CTNAG	6 cut(s)	737, 744, 1016, 1457, 1514, 1791
HpySE526I	ACGT	1 cut(s)	578
Hsp92I	GRCGYC	1 cut(s)	578
Hsp92II	CATG	8 cut(s)	613, 767, 920, 970, 1081, 1895, 2196, 2244
HspAI	GCGC	1 cut(s)	311
Kpn2I	TCCGGA	2 cut(s)	673, 1799
KspAI	GTTAAC	1 cut(s)	1939
Kzo9I	GATC	3 cut(s)	823, 937, 2185
LguI	GCTCTTC	3 cut(s)	783, 1529, 1809
LmnI	GCTCC	6 cut(s)	50, 590, 841, 859, 1510, 2178
Lsp1109I	GCAGC	3 cut(s)	46, 1338, 1423
LweI	GCATC	2 cut(s)	343, 1375
MaeI	CTAG	5 cut(s)	170, 704, 1067, 1497, 1577
MaeII	ACGT	1 cut(s)	578
MaeIII	GTNAC	8 cut(s)	325, 919, 994, 1097, 1170, 1243, 1391, 2153
MalI	GATC	3 cut(s)	825, 939, 2187
MboI	GATC	3 cut(s)	823, 937, 2185
MhlI	GDGCHC	2 cut(s)	795, 1760
MlyI	GAGTC	2 cut(s)	314, 694
Mph1103I	ATGCAT	1 cut(s)	358
MroI	TCCGGA	2 cut(s)	673, 1799
MroXI	GAANNNNTTC	3 cut(s)	726, 1225, 1739
MseI	TTAA	6 cut(s)	423, 572, 834, 1103, 1259, 1938
MslI	CAYNNNNRTG	1 cut(s)	1152
MspI	CCGG	3 cut(s)	674, 1471, 1800
MspR9I	CCNGG	9 cut(s)	92, 525, 902, 1309, 1441, 1471, 1632, 1668, 1704
MvaI	CCWGG	8 cut(s)	92, 525, 902, 1309, 1441, 1632, 1668, 1704
MwoI	GCNNNNNNNGC	4 cut(s)	95, 724, 1436, 1519
NciI	CCSGG	1 cut(s)	1471
NdeI	CATATG	3 cut(s)	50, 544, 1132
NdeII	GATC	3 cut(s)	823, 937, 2185
NlaIII	CATG	8 cut(s)	613, 767, 920, 970, 1081, 1895, 2196, 2244
NlaIV	GGNNCC	9 cut(s)	46, 490, 672, 855, 906, 1419, 1485, 1672, 1917
NmuCI	GTSAC	3 cut(s)	1097, 1391, 2153
NsiI	ATGCAT	1 cut(s)	358
NspV	TTCGAA	2 cut(s)	196, 2226
PaqCI	CACCTGC	1 cut(s)	1069
PciSI	GCTCTTC	3 cut(s)	783, 1529, 1809
PdmI	GAANNNNTTC	3 cut(s)	726, 1225, 1739
PfeI	GAWTC	6 cut(s)	616, 1144, 1183, 1226, 1544, 2237
PflMI	CCANNNNNTGG	1 cut(s)	1601
PfoI	TCCNGGA	2 cut(s)	1307, 1469
PkrI	GCNGC	3 cut(s)	61, 1353, 1438
PleI	GAGTC	2 cut(s)	314, 694
PpsI	GAGTC	2 cut(s)	314, 694
PshBI	ATTAAT	1 cut(s)	834
Psp6I	CCWGG	8 cut(s)	90, 523, 900, 1307, 1439, 1630, 1666, 1702
PspGI	CCWGG	8 cut(s)	90, 523, 900, 1307, 1439, 1630, 1666, 1702
PspN4I	GGNNCC	9 cut(s)	46, 490, 672, 855, 906, 1419, 1485, 1672, 1917
PspPI	GGNCC	4 cut(s)	88, 488, 1081, 1634
PsrI	GAACNNNNNNTAC	2 cut(s)	1476, 1508
PstNI	CAGNNNCTG	1 cut(s)	119
RsaI	GTAC	7 cut(s)	168, 537, 1057, 1330, 1600, 1866, 1988
RsaNI	GTAC	7 cut(s)	167, 536, 1056, 1329, 1599, 1865, 1987
RseI	CAYNNNNRTG	1 cut(s)	1152
SapI	GCTCTTC	3 cut(s)	783, 1529, 1809
SaqAI	TTAA	6 cut(s)	423, 572, 834, 1103, 1259, 1938
SatI	GCNGC	3 cut(s)	60, 1352, 1437
Sau3AI	GATC	3 cut(s)	823, 937, 2185
Sau96I	GGNCC	4 cut(s)	88, 488, 1081, 1634
ScaI	AGTACT	1 cut(s)	1600
SchI	GAGTC	2 cut(s)	314, 694
ScrFI	CCNGG	9 cut(s)	92, 525, 902, 1309, 1441, 1471, 1632, 1668, 1704
SduI	GDGCHC	2 cut(s)	795, 1760
SfaNI	GCATC	2 cut(s)	343, 1375
SfcI	CTRYAG	1 cut(s)	861
SfuI	TTCGAA	2 cut(s)	196, 2226
SinI	GGWCC	2 cut(s)	488, 1081
SmiMI	CAYNNNNRTG	1 cut(s)	1152
SmlI	CTYRAG	5 cut(s)	80, 621, 639, 1646, 1682
SmoI	CTYRAG	5 cut(s)	80, 621, 639, 1646, 1682
SspMI	CTAG	5 cut(s)	170, 704, 1067, 1497, 1577
StyD4I	CCNGG	9 cut(s)	90, 523, 900, 1307, 1439, 1469, 1630, 1666, 1702
TaaI	ACNGT	4 cut(s)	15, 1363, 1558, 2209
TaiI	ACGT	1 cut(s)	581
TaqI	TCGA	5 cut(s)	196, 581, 952, 2020, 2226
TatI	WGTACW	3 cut(s)	535, 1055, 1598
TfiI	GAWTC	6 cut(s)	616, 1144, 1183, 1226, 1544, 2237
Tru1I	TTAA	6 cut(s)	423, 572, 834, 1103, 1259, 1938
Tru9I	TTAA	6 cut(s)	423, 572, 834, 1103, 1259, 1938
TscAI	CASTG	3 cut(s)	20, 391, 2106
TseFI	GTSAC	3 cut(s)	1097, 1391, 2153
TseI	GCWGC	3 cut(s)	59, 1351, 1436
Tsp45I	GTSAC	3 cut(s)	1097, 1391, 2153
TspGWI	ACGGA	1 cut(s)	2156
TspRI	CASTG	3 cut(s)	20, 391, 2106
Van91I	CCANNNNNTGG	1 cut(s)	1601
VpaK11BI	GGWCC	2 cut(s)	488, 1081
VspI	ATTAAT	1 cut(s)	834
XapI	RAATTY	5 cut(s)	129, 482, 882, 1474, 2000
XbaI	TCTAGA	1 cut(s)	1066
XcmI	CCANNNNNNNNNTGG	1 cut(s)	875
XmiI	GTMKAC	1 cut(s)	1606
XmnI	GAANNNNTTC	3 cut(s)	726, 1225, 1739
XspI	CTAG	5 cut(s)	170, 704, 1067, 1497, 1577
ZraI	GACGTC	1 cut(s)	579
ZrmI	AGTACT	1 cut(s)	1600
Zsp2I	ATGCAT	1 cut(s)	358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.