Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000681

Physical Location & Seq

Genomic Coordinates Forward (+)

945147 .. 948427

Gene Structure 3281 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1015100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGTTCTACTCGCAGCGCCTGCTGTCGAGAAAAGGGCCGTTGGGCGGCATTTGGGTTGCCGCCTACTCGTTCAAAAAGCTCAAGAGGTCGCAGGTCAACCAGACCGACATCTCCTCCTCCATCGATGAAATTTTGCAGGATGAATGGGATGCTGTTGCGTACAGGGTACTGGCCTACCTTCTTCTTGGCGTCGTTCGAATATTCTCAAAGAAAGTTGAATATCTGTATGATGACTGCAGTGAAGTGCTGGTTAAAATCAACAAATTTGTAGTCAGCACAAAAAAGAATGCAGGCGCAGATAAGCTGCGTGCACCTTATTACGCTGTTACGCTACCTGATAGGTTTGAACTTGATGCTTTCGATCTGGGGATCCTTGAAATTGAAGATGTCAGTGGCATGATTACGAGGAATTTGGTGCCTGTGACACCCCAGTCAAAGAGTATTGTACTTTCGTCTCACTGGTTGGGTTTTGACACTGAGCTAAGAGCATCGAGTAGTGGAACCAAGTCAGCGGCAGTTGTGGCGAAGTTTCAAGAGAAAGTGTTCTATCAAGAAGAATGCGCTGATCTAGAAACAACTTTTAGAGTTGAGGACGAACCTCCAAGACAAGTTAAACCATCTGGTGAAGGTCAAGAAACTAATGTAGCACTTTCTGAAGTTGCTATTCGAGGACAAGCAAACCCGGGGGAAAAGCTTCAAGACCTTAGGTTGTCTCCCGAAGGTTTGAACCTTGAGACATTCGATGGGACTGAGAGAGAACCTTCCCACCATGTTATTAAATCATCCAGTGAAGGTCATCAAATTGATCGGGAGGAGATTATGGAACCAGAGTTGGTACAACCAGAAAGTCAGACATGTCCAAATATAGTACAAGACCATAATCTAATCACCGTAGAAGCTGGCATGGAAAAGTTGCAGAGTTGTACAGTTTCTCAAGAAGAGTACATGGACATTGATACATTTAATGAGGCGAAGCAACCTCGAGAACTTGTTTGTTCATCTGGTCAAGCAAATCATAACGATGGAGAGCCAAAAAAATTACCCGAGATGATTTCACCGGATAGTAAAGAACGTCAAATTATCATGCAAGAAGATCGAGATCCTCTCTCTGTTTCATGTGATGGAACTCCTGGTGTCAAAATCCCCGATGCAGGTGCACCAAAGTTTATGGTTATTCATACACCGGCTTCTAAGGAGTTTGCTCGATTTTCTAGGAAAAGGAAATGTGTCATGGATGATATGATAGTCCTGCCTAATGAGGTAATCAGGAAAAGCATAAATGATGCAAGTGACATGGTTTCTAAAAGAAAGAAAGTTCCTCAAACTGCCCTTGCTATCTGGAAAGCCAGTCGAATTGCAAATCTTTGCCATGATTTCTCAGAGCCATTGATACCTGGTAATTTTCTATCATTATTTACTTTATGTTTCATCAGTCCTGGTCCTCGTGGAACCGTTGCTAACCATATATTTTCAGCTGCTGTTTCGCGAGAACTTAGATCCATCTTCTGCAAAACGAAATTAAAGATTACAGCACCAGCCGAACCAGTTGCCCCTCCAGAAAAGTTACATGCGCCAGAATCTCCAAGTGGTGTTAAGTCAGAGCAAGTAGAAATTGCACCAGAAACACCCGTTCTTCGCTCACAATCAGTGAAATCATTTGGGACTCCAAAGAGCCCTGACGCTGTTGATATGGATATCTTAACACCTGAGACATTTGGAGGGATGGAGAAAGAGGAGCCACCCCTGGGCAGCAGGGAGCAACCTGCCCCATCTGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

593

Amino Acids

65.58

Weight (kDa)

5.28

Isoelectric Point (pI)

57.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	1 - 94	3.8e-27	N terminus of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840
fragaria_vesca	FvH4_6g53040 FvH4_6g53040 FvH4_6g53050 FvH4_6g53050
malus_domestica	MD09G1015100.v1.1 MD09G1015200.v1.1 MD17G1015200.v1.1
prunus_persica	Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1
pyrus_communis	pycom111g01230 pycom17g01230 pycom17g01240
rosa_chinensis	RchiOBHm_Chr2g0146031 RchiOBHm_Chr2g0172041 RchiOBHm_Chr2g0172061 RchiOBHm_Chr2g0172121 RchiOBHm_Chr2g0172131 RchiOBHm_Chr2g0172161 RchiOBHm_Chr2g0173841 RchiOBHm_Chr2g0174821 RchiOBHm_Chr2g0174831
rosa_laevigata	RLG00000022078 RLG00000022079 RLG00000022228 RLG00000022298 RLG00000022299 RLG00000032768
rosa_multiflora	Rmu_co8137076.1_g000001 Rmu_sc0001716.1_g000038 Rmu_sc0003188.1_g000021 Rmu_sc0015734.1_g000001 Rmu_sc0038259.1_g000001 Rmu_sc0038259.1_g000002 Rmu_sc0040737.1_g000001 Rmu_sc0041600.1_g000001 Rmu_ssc0000252.1_g000045
rosa_roxburghii	Rroxscaffold_2G00077660 Rroxscaffold_2G00080120 Rroxscaffold_2G00080130 Rroxscaffold_2G00080290
rosa_rugosa	Rorug02G0579500 Rorug02G0579600
rosa_samantha	Rh2AG632100 Rh2AG632200 Rh2AG656700 Rh2AG656800 Rh2AG660800 Rh2AG660900 Rh2BG645600 Rh2BG645700 Rh2BG667700 Rh2BG667800 Rh2BG672200 Rh2BG672300 Rh2CG627800 Rh2CG627900 Rh2CG635000 Rh2CG635100 Rh2DG658600 Rh2DG678300 Rh2DG685300 Rh2DG685400 Rh6AG066100 Rh6BG058900
rosa_wichuraiana	Rw2G053570 Rw2G054150 Rw2G054160 Rw6G005810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1142
AasI	GACNNNNNNGTC	1 cut(s)	430
Acc36I	ACCTGC	3 cut(s)	82, 1142, 1771
AccB1I	GGYRCC	1 cut(s)	415
AccII	CGCG	1 cut(s)	1486
AciI	CCGC	3 cut(s)	45, 60, 512
AclWI	GGATC	4 cut(s)	364, 377, 1094, 1491
AcsI	RAATTY	3 cut(s)	129, 263, 409
AcuI	CTGAAG	1 cut(s)	675
AcyI	GRCGYC	1 cut(s)	189
AfaI	GTAC	7 cut(s)	161, 168, 447, 837, 870, 925, 944
AfiI	CCNNNNNNNGG	3 cut(s)	44, 1151, 1745
AflIII	ACRYGT	1 cut(s)	854
AgsI	TTSAA	8 cut(s)	73, 218, 347, 377, 383, 533, 698, 727
AjnI	CCWGG	4 cut(s)	1129, 1393, 1435, 1743
AluBI	AGCT	6 cut(s)	79, 304, 481, 694, 899, 1475
AluI	AGCT	6 cut(s)	79, 304, 481, 694, 899, 1475
Alw21I	GWGCWC	2 cut(s)	313, 1159
Alw26I	GTCTC	4 cut(s)	459, 717, 728, 1703
Alw44I	GTGCAC	2 cut(s)	309, 1155
AlwI	GGATC	4 cut(s)	364, 377, 1094, 1491
AlwNI	CAGNNNCTG	2 cut(s)	19, 1478
Ama87I	CYCGRG	3 cut(s)	682, 981, 1043
AoxI	GGCC	2 cut(s)	35, 171
ApaLI	GTGCAC	2 cut(s)	309, 1155
ApeKI	GCWGC	4 cut(s)	13, 304, 1475, 1749
ApoI	RAATTY	3 cut(s)	129, 263, 409
ArsI	GACNNNNNNTTYG	2 cut(s)	255, 287
Asp700I	GAANNNNTTC	2 cut(s)	542, 693
AspLEI	GCGC	4 cut(s)	18, 296, 563, 1573
AspS9I	GGNCC	2 cut(s)	35, 1439
AsuC2I	CCSGG	2 cut(s)	683, 684
AsuHPI	GGTGA	3 cut(s)	635, 880, 1047
AsuII	TTCGAA	1 cut(s)	196
AvaI	CYCGRG	3 cut(s)	682, 981, 1043
AvaII	GGWCC	1 cut(s)	1439
AxyI	CCTNAGG	1 cut(s)	704
BaeGI	GKGCMC	2 cut(s)	313, 1159
BamHI	GGATCC	1 cut(s)	369
BanI	GGYRCC	1 cut(s)	415
BanII	GRGCYC	1 cut(s)	1676
BauI	CACGAG	1 cut(s)	1443
Bbv12I	GWGCWC	2 cut(s)	313, 1159
BbvI	GCAGC	4 cut(s)	25, 291, 1462, 1761
BccI	CCATC	8 cut(s)	128, 625, 737, 1016, 1115, 1508, 1717, 1777
BceAI	ACGGC	1 cut(s)	22
BcgI	CGANNNNNNTGC	6 cut(s)	1076, 1110, 1136, 1170, 1529, 1563
BciT130I	CCWGG	4 cut(s)	1131, 1395, 1437, 1745
BcnI	CCSGG	2 cut(s)	683, 684
BcoDI	GTCTC	4 cut(s)	459, 717, 728, 1703
BfaI	CTAG	2 cut(s)	569, 1212
BfmI	CTRYAG	1 cut(s)	235
BfoI	RGCGCY	1 cut(s)	19
BfuAI	ACCTGC	3 cut(s)	82, 1142, 1771
BisI	GCNGC	7 cut(s)	14, 46, 60, 305, 513, 1476, 1750
BlsI	GCNGC	7 cut(s)	15, 47, 61, 306, 514, 1477, 1751
Bme1390I	CCNGG	6 cut(s)	683, 684, 1131, 1395, 1437, 1745
Bme18I	GGWCC	1 cut(s)	1439
BmeT110I	CYCGRG	3 cut(s)	682, 981, 1043
BmgT120I	GGNCC	2 cut(s)	35, 1439
BmiI	GGNNCC	6 cut(s)	371, 417, 502, 825, 1450, 1737
BmrFI	CCNGG	6 cut(s)	683, 684, 1131, 1395, 1437, 1745
BmrI	ACTGGG	1 cut(s)	424
BmsI	GCATC	5 cut(s)	139, 343, 497, 1138, 1273
BmuI	ACTGGG	1 cut(s)	424
BplI	GAGNNNNNCTC	2 cut(s)	1089, 1121
BpmI	CTGGAG	1 cut(s)	1539
Bpu14I	TTCGAA	1 cut(s)	196
BpuEI	CTTGAG	3 cut(s)	65, 752, 918
BpuMI	CCSGG	2 cut(s)	683, 684
Bsa29I	ATCGAT	1 cut(s)	123
BsaBI	GATNNNNATC	1 cut(s)	1098
BsaHI	GRCGYC	1 cut(s)	189
BsaJI	CCNNGG	4 cut(s)	682, 683, 1743, 1744
BsaWI	WCCGGW	1 cut(s)	1057
BsaXI	ACNNNNNCTCC	2 cut(s)	98, 128
Bsc4I	CCNNNNNNNGG	3 cut(s)	44, 1151, 1745
Bse118I	RCCGGY	1 cut(s)	1183
Bse1I	ACTGG	6 cut(s)	174, 430, 464, 786, 1347, 1544
Bse21I	CCTNAGG	1 cut(s)	704
Bse8I	GATNNNNATC	1 cut(s)	1098
BseBI	CCWGG	4 cut(s)	1131, 1395, 1437, 1745
BseCI	ATCGAT	1 cut(s)	123
BseDI	CCNNGG	4 cut(s)	682, 683, 1743, 1744
BseGI	GGATG	5 cut(s)	145, 154, 782, 1240, 1728
BseJI	GATNNNNATC	1 cut(s)	1098
BseLI	CCNNNNNNNGG	3 cut(s)	44, 1151, 1745
BseMII	CTCAG	4 cut(s)	468, 741, 1392, 1698
BseNI	ACTGG	6 cut(s)	174, 430, 464, 786, 1347, 1544
BseRI	GAGGAG	4 cut(s)	103, 106, 827, 1748
BseSI	GKGCMC	2 cut(s)	313, 1159
BseXI	GCAGC	4 cut(s)	25, 291, 1462, 1761
Bsh1236I	CGCG	1 cut(s)	1486
BshFI	GGCC	2 cut(s)	37, 173
BshNI	GGYRCC	1 cut(s)	415
BshVI	ATCGAT	1 cut(s)	123
BsiHKAI	GWGCWC	2 cut(s)	313, 1159
BsiHKCI	CYCGRG	3 cut(s)	682, 981, 1043
BsiSI	CCGG	3 cut(s)	683, 1058, 1184
BslFI	GGGAC	2 cut(s)	760, 1675
BslI	CCNNNNNNNGG	3 cut(s)	44, 1151, 1745
BsmAI	GTCTC	4 cut(s)	459, 717, 728, 1703
BsmBI	CGTCTC	1 cut(s)	459
BsmFI	GGGAC	2 cut(s)	760, 1675
BsmI	GAATGC	2 cut(s)	292, 563
BsnI	GGCC	2 cut(s)	37, 173
BsoBI	CYCGRG	3 cut(s)	682, 981, 1043
Bsp119I	TTCGAA	1 cut(s)	196
Bsp1286I	GDGCHC	3 cut(s)	313, 1159, 1676
Bsp1407I	TGTACA	1 cut(s)	923
Bsp143I	GATC	7 cut(s)	361, 369, 565, 805, 1093, 1099, 1496
Bsp68I	TCGCGA	1 cut(s)	1486
BspACI	CCGC	3 cut(s)	45, 60, 512
BspANI	GGCC	2 cut(s)	37, 173
BspCNI	CTCAG	4 cut(s)	469, 742, 1391, 1699
BspDI	ATCGAT	1 cut(s)	123
BspFNI	CGCG	1 cut(s)	1486
BspLI	GGNNCC	6 cut(s)	371, 417, 502, 825, 1450, 1737
BspMAI	CTGCAG	1 cut(s)	239
BspMI	ACCTGC	3 cut(s)	82, 1142, 1771
BspPI	GGATC	4 cut(s)	364, 377, 1094, 1491
BspT104I	TTCGAA	1 cut(s)	196
BspT107I	GGYRCC	1 cut(s)	415
BsrFI	RCCGGY	1 cut(s)	1183
BsrGI	TGTACA	1 cut(s)	923
BsrI	ACTGG	6 cut(s)	174, 430, 464, 786, 1347, 1544
BssAI	RCCGGY	1 cut(s)	1183
BssECI	CCNNGG	4 cut(s)	682, 683, 1743, 1744
BssMI	GATC	7 cut(s)	361, 369, 565, 805, 1093, 1099, 1496
BssNI	GRCGYC	1 cut(s)	189
BssSI	CACGAG	1 cut(s)	1443
Bst2BI	CACGAG	1 cut(s)	1443
Bst2UI	CCWGG	4 cut(s)	1131, 1395, 1437, 1745
Bst4CI	ACNGT	3 cut(s)	892, 928, 1453
Bst6I	CTCTTC	1 cut(s)	933
BstACI	GRCGYC	1 cut(s)	189
BstAPI	GCANNNNNTGC	1 cut(s)	19
BstAUI	TGTACA	1 cut(s)	923
BstBI	TTCGAA	1 cut(s)	196
BstC8I	GCNNGC	4 cut(s)	20, 292, 309, 901
BstDEI	CTNAG	8 cut(s)	477, 482, 704, 750, 1191, 1378, 1493, 1707
BstF5I	GGATG	5 cut(s)	145, 154, 782, 1240, 1728
BstFNI	CGCG	1 cut(s)	1486
BstH2I	RGCGCY	1 cut(s)	19
BstHHI	GCGC	4 cut(s)	18, 296, 563, 1573
BstKTI	GATC	7 cut(s)	364, 372, 568, 808, 1096, 1102, 1499
BstMAI	GTCTC	4 cut(s)	459, 717, 728, 1703
BstMBI	GATC	7 cut(s)	361, 369, 565, 805, 1093, 1099, 1496
BstMWI	GCNNNNNNNGC	2 cut(s)	19, 521
BstNI	CCWGG	4 cut(s)	1131, 1395, 1437, 1745
BstNSI	RCATGY	2 cut(s)	858, 1571
BstSCI	CCNGG	6 cut(s)	681, 682, 1129, 1393, 1435, 1743
BstSFI	CTRYAG	1 cut(s)	235
BstSLI	GKGCMC	2 cut(s)	313, 1159
BstUI	CGCG	1 cut(s)	1486
BstV1I	GCAGC	4 cut(s)	25, 291, 1462, 1761
BstX2I	RGATCY	3 cut(s)	369, 1099, 1496
BstYI	RGATCY	3 cut(s)	369, 1099, 1496
Bsu15I	ATCGAT	1 cut(s)	123
Bsu36I	CCTNAGG	1 cut(s)	704
BsuRI	GGCC	2 cut(s)	37, 173
BsuTUI	ATCGAT	1 cut(s)	123
BtsCI	GGATG	5 cut(s)	145, 154, 782, 1240, 1728
BtsI	GCAGTG	1 cut(s)	244
BtsIMutI	CAGTG	6 cut(s)	244, 397, 457, 474, 793, 1653
BtuMI	TCGCGA	1 cut(s)	1486
BveI	ACCTGC	3 cut(s)	82, 1142, 1771
Cac8I	GCNNGC	4 cut(s)	20, 292, 309, 901
CaiI	CAGNNNCTG	2 cut(s)	19, 1478
CfoI	GCGC	4 cut(s)	18, 296, 563, 1573
Cfr10I	RCCGGY	1 cut(s)	1183
Cfr13I	GGNCC	2 cut(s)	35, 1439
Cfr9I	CCCGGG	1 cut(s)	682
ClaI	ATCGAT	1 cut(s)	123
CseI	GACGC	2 cut(s)	178, 1688
CsiI	ACCWGGT	1 cut(s)	1393
Csp6I	GTAC	7 cut(s)	160, 167, 446, 836, 869, 924, 943
CviQI	GTAC	7 cut(s)	160, 167, 446, 836, 869, 924, 943
DdeI	CTNAG	8 cut(s)	477, 482, 704, 750, 1191, 1378, 1493, 1707
DpnI	GATC	7 cut(s)	363, 371, 567, 807, 1095, 1101, 1498
DpnII	GATC	7 cut(s)	361, 369, 565, 805, 1093, 1099, 1496
DrdI	GACNNNNNNGTC	1 cut(s)	430
DseDI	GACNNNNNNGTC	1 cut(s)	430
Eam1104I	CTCTTC	1 cut(s)	933
EarI	CTCTTC	1 cut(s)	933
Eco24I	GRGCYC	1 cut(s)	1676
Eco32I	GATATC	1 cut(s)	1696
Eco47I	GGWCC	1 cut(s)	1439
Eco57I	CTGAAG	1 cut(s)	675
Eco81I	CCTNAGG	1 cut(s)	704
Eco88I	CYCGRG	3 cut(s)	682, 981, 1043
EcoRII	CCWGG	4 cut(s)	1129, 1393, 1435, 1743
EcoRV	GATATC	1 cut(s)	1696
EcoT38I	GRGCYC	1 cut(s)	1676
Esp3I	CGTCTC	1 cut(s)	459
FaqI	GGGAC	2 cut(s)	760, 1675
Fnu4HI	GCNGC	7 cut(s)	14, 46, 60, 305, 513, 1476, 1750
FokI	GGATG	5 cut(s)	152, 161, 769, 1247, 1735
FriOI	GRGCYC	1 cut(s)	1676
Fsp4HI	GCNGC	7 cut(s)	14, 46, 60, 305, 513, 1476, 1750
FspBI	CTAG	2 cut(s)	569, 1212
GlaI	GCGC	4 cut(s)	17, 295, 562, 1572
GluI	GCNGC	7 cut(s)	14, 46, 60, 305, 513, 1476, 1750
GsuI	CTGGAG	1 cut(s)	1539
HaeII	RGCGCY	1 cut(s)	19
HaeIII	GGCC	2 cut(s)	37, 173
HapII	CCGG	3 cut(s)	683, 1058, 1184
HgaI	GACGC	2 cut(s)	178, 1688
HhaI	GCGC	4 cut(s)	18, 296, 563, 1573
Hin1I	GRCGYC	1 cut(s)	189
Hin6I	GCGC	4 cut(s)	16, 294, 561, 1571
HinP1I	GCGC	4 cut(s)	16, 294, 561, 1571
HincII	GTYRAC	1 cut(s)	97
HindII	GTYRAC	1 cut(s)	97
HindIII	AAGCTT	1 cut(s)	692
HinfI	GANTC	2 cut(s)	1577, 1663
HpaII	CCGG	3 cut(s)	683, 1058, 1184
HphI	GGTGA	3 cut(s)	635, 880, 1047
Hpy166II	GTNNAC	3 cut(s)	97, 311, 1157
Hpy188I	TCNGA	4 cut(s)	655, 852, 1381, 1600
Hpy8I	GTNNAC	3 cut(s)	97, 311, 1157
Hpy99I	CGWCG	1 cut(s)	194
HpyAV	CCTTC	5 cut(s)	188, 620, 713, 771, 785
HpyCH4III	ACNGT	3 cut(s)	892, 928, 1453
HpyCH4IV	ACGT	1 cut(s)	1072
HpyF10VI	GCNNNNNNNGC	2 cut(s)	19, 521
HpyF3I	CTNAG	8 cut(s)	477, 482, 704, 750, 1191, 1378, 1493, 1707
HpySE526I	ACGT	1 cut(s)	1072
Hsp92I	GRCGYC	1 cut(s)	189
HspAI	GCGC	4 cut(s)	16, 294, 561, 1571
Kzo9I	GATC	7 cut(s)	361, 369, 565, 805, 1093, 1099, 1496
LmnI	GCTCC	2 cut(s)	1735, 1756
Lsp1109I	GCAGC	4 cut(s)	25, 291, 1462, 1761
LweI	GCATC	5 cut(s)	139, 343, 497, 1138, 1273
MabI	ACCWGGT	1 cut(s)	1393
MaeI	CTAG	2 cut(s)	569, 1212
MaeII	ACGT	1 cut(s)	1072
MaeIII	GTNAC	4 cut(s)	325, 421, 1289, 1563
MalI	GATC	7 cut(s)	363, 371, 567, 807, 1095, 1101, 1498
MboI	GATC	7 cut(s)	361, 369, 565, 805, 1093, 1099, 1496
MboII	GAAGA	7 cut(s)	173, 395, 566, 950, 1103, 1495, 1625
MflI	RGATCY	3 cut(s)	369, 1099, 1496
MhlI	GDGCHC	3 cut(s)	313, 1159, 1676
MlyI	GAGTC	1 cut(s)	1657
MroXI	GAANNNNTTC	2 cut(s)	542, 693
MseI	TTAA	7 cut(s)	252, 612, 777, 963, 1520, 1593, 1700
MslI	CAYNNNNRTG	1 cut(s)	1020
MspA1I	CMGCKG	2 cut(s)	512, 1475
MspI	CCGG	3 cut(s)	683, 1058, 1184
MspR9I	CCNGG	6 cut(s)	683, 684, 1131, 1395, 1437, 1745
Mva1269I	GAATGC	2 cut(s)	292, 563
MvaI	CCWGG	4 cut(s)	1131, 1395, 1437, 1745
MvnI	CGCG	1 cut(s)	1486
MwoI	GCNNNNNNNGC	2 cut(s)	19, 521
NciI	CCSGG	2 cut(s)	683, 684
NdeII	GATC	7 cut(s)	361, 369, 565, 805, 1093, 1099, 1496
NlaIV	GGNNCC	6 cut(s)	371, 417, 502, 825, 1450, 1737
NmuCI	GTSAC	2 cut(s)	421, 1289
NruI	TCGCGA	1 cut(s)	1486
NspI	RCATGY	2 cut(s)	858, 1571
NspV	TTCGAA	1 cut(s)	196
PaeR7I	CTCGAG	1 cut(s)	981
PaqCI	CACCTGC	1 cut(s)	1142
PasI	CCCWGGG	1 cut(s)	1744
PciI	ACATGT	1 cut(s)	854
PctI	GAATGC	2 cut(s)	292, 563
PdmI	GAANNNNTTC	2 cut(s)	542, 693
PfeI	GAWTC	1 cut(s)	1577
PkrI	GCNGC	7 cut(s)	15, 47, 61, 306, 514, 1477, 1751
PleI	GAGTC	1 cut(s)	1657
PpsI	GAGTC	1 cut(s)	1657
PscI	ACATGT	1 cut(s)	854
Psp6I	CCWGG	4 cut(s)	1129, 1393, 1435, 1743
PspGI	CCWGG	4 cut(s)	1129, 1393, 1435, 1743
PspN4I	GGNNCC	6 cut(s)	371, 417, 502, 825, 1450, 1737
PspPI	GGNCC	2 cut(s)	35, 1439
PstI	CTGCAG	1 cut(s)	239
PstNI	CAGNNNCTG	2 cut(s)	19, 1478
PsuI	RGATCY	3 cut(s)	369, 1099, 1496
PvuII	CAGCTG	1 cut(s)	1475
RruI	TCGCGA	1 cut(s)	1486
RsaI	GTAC	7 cut(s)	161, 168, 447, 837, 870, 925, 944
RsaNI	GTAC	7 cut(s)	160, 167, 446, 836, 869, 924, 943
RseI	CAYNNNNRTG	1 cut(s)	1020
SaqAI	TTAA	7 cut(s)	252, 612, 777, 963, 1520, 1593, 1700
SatI	GCNGC	7 cut(s)	14, 46, 60, 305, 513, 1476, 1750
Sau3AI	GATC	7 cut(s)	361, 369, 565, 805, 1093, 1099, 1496
Sau96I	GGNCC	2 cut(s)	35, 1439
SchI	GAGTC	1 cut(s)	1657
ScrFI	CCNGG	6 cut(s)	683, 684, 1131, 1395, 1437, 1745
SduI	GDGCHC	3 cut(s)	313, 1159, 1676
SexAI	ACCWGGT	1 cut(s)	1393
SfaNI	GCATC	5 cut(s)	139, 343, 497, 1138, 1273
SfcI	CTRYAG	1 cut(s)	235
Sfr274I	CTCGAG	1 cut(s)	981
SfuI	TTCGAA	1 cut(s)	196
SinI	GGWCC	1 cut(s)	1439
SlaI	CTCGAG	1 cut(s)	981
SmaI	CCCGGG	1 cut(s)	684
SmiMI	CAYNNNNRTG	1 cut(s)	1020
SmlI	CTYRAG	4 cut(s)	80, 731, 933, 981
SmoI	CTYRAG	4 cut(s)	80, 731, 933, 981
SsiI	CCGC	3 cut(s)	45, 60, 512
SspI	AATATT	1 cut(s)	201
SspMI	CTAG	2 cut(s)	569, 1212
StyD4I	CCNGG	6 cut(s)	681, 682, 1129, 1393, 1435, 1743
TaaI	ACNGT	3 cut(s)	892, 928, 1453
TaiI	ACGT	1 cut(s)	1075
TaqII	GACCGA	1 cut(s)	119
TatI	WGTACW	4 cut(s)	445, 868, 923, 942
TauI	GCSGC	3 cut(s)	48, 62, 515
TfiI	GAWTC	1 cut(s)	1577
Tru1I	TTAA	7 cut(s)	252, 612, 777, 963, 1520, 1593, 1700
Tru9I	TTAA	7 cut(s)	252, 612, 777, 963, 1520, 1593, 1700
TscAI	CASTG	6 cut(s)	244, 397, 464, 481, 793, 1653
TseFI	GTSAC	2 cut(s)	421, 1289
TseI	GCWGC	4 cut(s)	13, 304, 1475, 1749
Tsp45I	GTSAC	2 cut(s)	421, 1289
TspDTI	ATGAA	6 cut(s)	141, 156, 987, 1104, 1166, 1417
TspMI	CCCGGG	1 cut(s)	682
TspRI	CASTG	6 cut(s)	244, 397, 464, 481, 793, 1653
VneI	GTGCAC	2 cut(s)	309, 1155
VpaK11BI	GGWCC	1 cut(s)	1439
XapI	RAATTY	3 cut(s)	129, 263, 409
XbaI	TCTAGA	1 cut(s)	568
XceI	RCATGY	2 cut(s)	858, 1571
XhoI	CTCGAG	1 cut(s)	981
XmaI	CCCGGG	1 cut(s)	682
XmnI	GAANNNNTTC	2 cut(s)	542, 693
XspI	CTAG	2 cut(s)	569, 1212

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.