Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0000681

Physical Location & Seq

Genomic Coordinates Reverse (-)

88368081 .. 88372723

Gene Structure 4643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG672300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGTCTATTCACAGAGCTTGTTAGCAAGAAGAGGGCCTTTGGGCGCCATATGGGTCGCTGCTTACTGTTTCAAGAAGCTCAAGAAGACCCAGATCACAGAGACTGACATTTTGGCCGCTATTGATAAAATTTTAAAGGATGAATGGGATGGTGTCGCATATAGAGTACTAGCCTACCTACTTCTGGGTGTTGTTCGAATATACTCGAGGAAAGTTGAATATCTTTTTGATGACTGCAATGAAGTGCTACTAGACATCAAGAAATTTGTGTTTAATACAAAAGACAATGCACCTGCAGAAATGCTGTGTGCGGCTTATCACTCTGTTATCATACCGGATAGGTTTGAACTTGATGCTTTTGATATGGGGAGCCTTGAACATTATGATCATATGGAATTTGGTGCCTGCCACAGTATTTTCTCAACTTATTACACCCCAGTCAGAAGTGTACTTTCATCTCACCTGATGGACTTTGGTATGGAGTTAATAACATCGAGTAGTGGAGCTAACACGGAAGAAATCATAGAGCAGCTTCAATGTCATAGGTTCTCTCAAGAAGAATGTACCGACATTGATACATTTATTGGCATTGAGAAAGAGCCTCAAAACCAAGTTAAGCAACATGGTGAAGATAATGAAACCAATGGAGAGCAGATAAAGACTCCAGATATAGCAGTGCCTGAAGATGGAATTCAGGAAGATGGTCAGAAGACTCAGAAGCATGAGATCTTTTATGGGAATAATATAGAACCTTCCTGCCATGTGATAACTGGTGAGGATCATCAAAGTGAACGAGAGGAGATGATGGAAATAGACTTGGTGCAACCAGAAAATCAGAGTTTTCAGATTACAAAAGAAGAGCATAGTCTAAGAAACTTAGAAGCTGACATGGAGAAAAGGGAAAATGCTACATTTTCTCAAGAAGAATCCCTGGACCTTGATGTGCTTTCTGGGGCCAAGAAACCTCAAGAACTTGTTTGTTCATATGGAGAAGAGAATCATAATGATGAAGAGCCGACTAAGTTACAGGACATAATTGCACCAGATACCATGAAAAATATTCCACAAGAAGATCCAGATCCCCTTTCAGTTGCATATGATGGCAGTCCTGACACCAAGCAACCAGATGCTCTAGGTATTACTACACCAAAATTGACGGCTGTTCCCAGACCAGTTTCCAAGAAGTTGGCTCGGTTTTCTAGGAAAAGAAAATGTGTCTTTGATGATATTGTAGTGCTGCCTAATGAGGTAATCAGGCAAAGCATACATGATGCTAGTGATTTGGTTGCTAAAAGAAAAAAAGTTCCCAAAAATGCCCATGCTGTTTGGAAAACTTGTCAAATTGGAAATCTTGCCCAGAATTTCTTGGAGCCATTGATATCTAACGTTTCGCAAGAGCTTAGGTCCCTCTTATGCAAAAGGAAACTGAGGAAATTAAAGATCACTCCAGAGAAGTTAGATTTGTTGGACTGTCAAAGGATTGGTTTATCAGAGCAAATGGAGGTTGTACATACAGAAACCGTTGAACCTGCAGAAGACTTGGATGTGTTAGAATATCCATGTACTGTTGGATTGGAACAAGCAGAAATTGCACCAGACACACCTGTTCTTCGCTCAAAATCAATCAAATCATTTCATAGTCCAAGGAGTCCTGAAGTTCCTGATATGGATCTAGTAAGACCTGAGACATCTGGAAGGATAGAAAAAGAACCGTCTATGGGAGCAGAGCAAACTTTCCCTTCTGGAAGTGTAGAAGAAGTACCACCATCTCTAGATAGGGATGACGAGCATGACTTCAATTTTTTGAGTGAGGAAGCTGAATTTTGCGAAGGAGTTAATCCTGAACTCGATGGGTGTTCAGTGAGAACTAGAAAGGTGGCGAGGTACTTGCACAGGCACTTTACAATTTGCAACAGTCTCCACGTGAACTTGTTGGAGGTTGCAGAACGAAGAACCAAGAAAGAAAGTGCAAGGCTATTCTATGAGACACTGGTGATGAAAACTAGAGGGTTTGTGGATGTGAAGCAAGCTGATCCCTATGGCGACATTCTAATCTGGAAACTTCCCAAATGGGATCAAATGTGGGGAGATGATACCTCCCAATCCCATAGAGTCACTTCTGAAACTATGTCTCTATGTCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

714

Amino Acids

81.24

Weight (kDa)

4.94

Isoelectric Point (pI)

50.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	1 - 94	5.3e-26	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	642 - 685	7.9e-15	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840
fragaria_vesca	FvH4_6g53040 FvH4_6g53040 FvH4_6g53050 FvH4_6g53050
malus_domestica	MD09G1015100.v1.1 MD09G1015200.v1.1 MD17G1015200.v1.1
prunus_persica	Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1
pyrus_communis	pycom111g01230 pycom17g01230 pycom17g01240
rosa_chinensis	RchiOBHm_Chr2g0146031 RchiOBHm_Chr2g0172041 RchiOBHm_Chr2g0172061 RchiOBHm_Chr2g0172121 RchiOBHm_Chr2g0172131 RchiOBHm_Chr2g0172161 RchiOBHm_Chr2g0173841 RchiOBHm_Chr2g0174821 RchiOBHm_Chr2g0174831
rosa_laevigata	RLG00000022078 RLG00000022079 RLG00000022228 RLG00000022298 RLG00000022299 RLG00000032768
rosa_multiflora	Rmu_co8137076.1_g000001 Rmu_sc0001716.1_g000038 Rmu_sc0003188.1_g000021 Rmu_sc0015734.1_g000001 Rmu_sc0038259.1_g000001 Rmu_sc0038259.1_g000002 Rmu_sc0040737.1_g000001 Rmu_sc0041600.1_g000001 Rmu_ssc0000252.1_g000045
rosa_roxburghii	Rroxscaffold_2G00077660 Rroxscaffold_2G00080120 Rroxscaffold_2G00080130 Rroxscaffold_2G00080290
rosa_rugosa	Rorug02G0579500 Rorug02G0579600
rosa_samantha	Rh2AG632100 Rh2AG632200 Rh2AG656700 Rh2AG656800 Rh2AG660800 Rh2AG660900 Rh2BG645600 Rh2BG645700 Rh2BG667700 Rh2BG667800 Rh2BG672200 Rh2BG672300 Rh2CG627800 Rh2CG627900 Rh2CG635000 Rh2CG635100 Rh2DG658600 Rh2DG678300 Rh2DG685300 Rh2DG685400 Rh6AG066100 Rh6BG058900
rosa_wichuraiana	Rw2G053570 Rw2G054150 Rw2G054160 Rw6G005810

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	301
Acc36I	ACCTGC	2 cut(s)	301, 1537
AccB1I	GGYRCC	2 cut(s)	44, 401
AciI	CCGC	2 cut(s)	117, 311
AclI	AACGTT	1 cut(s)	1386
AclWI	GGATC	6 cut(s)	786, 1067, 1073, 1677, 2027, 2082
AcoI	YGGCCR	1 cut(s)	114
AcsI	RAATTY	6 cut(s)	129, 263, 395, 690, 1360, 1820
AcuI	CTGAAG	2 cut(s)	702, 1674
AcvI	CACGTG	1 cut(s)	1924
AcyI	GRCGYC	1 cut(s)	45
AfaI	GTAC	7 cut(s)	168, 450, 565, 1509, 1564, 1761, 1886
AfiI	CCNNNNNNNGG	3 cut(s)	184, 686, 1718
AgsI	TTSAA	7 cut(s)	73, 218, 347, 377, 536, 1526, 1798
AjnI	CCWGG	1 cut(s)	930
AluBI	AGCT	8 cut(s)	18, 79, 506, 532, 884, 1399, 1817, 2030
AluI	AGCT	8 cut(s)	18, 79, 506, 532, 884, 1399, 1817, 2030
Alw26I	GTCTC	5 cut(s)	95, 1679, 1922, 1979, 2136
AlwI	GGATC	6 cut(s)	786, 1067, 1073, 1677, 2027, 2082
AlwNI	CAGNNNCTG	2 cut(s)	104, 680
Ama87I	CYCGRG	1 cut(s)	205
AoxI	GGCC	3 cut(s)	35, 114, 954
ApeKI	GCWGC	3 cut(s)	59, 529, 1237
ApoI	RAATTY	6 cut(s)	129, 263, 395, 690, 1360, 1820
ArsI	GACNNNNNNTTYG	2 cut(s)	94, 126
AspLEI	GCGC	1 cut(s)	47
AspS9I	GGNCC	4 cut(s)	35, 934, 954, 1404
AsuHPI	GGTGA	4 cut(s)	452, 638, 785, 2005
AsuII	TTCGAA	1 cut(s)	196
AvaI	CYCGRG	1 cut(s)	205
AvaII	GGWCC	2 cut(s)	934, 1404
BanI	GGYRCC	2 cut(s)	44, 401
BbrPI	CACGTG	1 cut(s)	1924
BbsI	GAAGAC	3 cut(s)	92, 716, 1542
BbvI	GCAGC	3 cut(s)	46, 541, 1224
BccI	CCATC	8 cut(s)	143, 460, 680, 695, 799, 1094, 1774, 1844
BceAI	ACGGC	1 cut(s)	1173
BcgI	CGANNNNNNTGC	2 cut(s)	1870, 1904
BciT130I	CCWGG	1 cut(s)	932
BclI	TGATCA	1 cut(s)	385
BcoDI	GTCTC	5 cut(s)	95, 1679, 1922, 1979, 2136
BfaI	CTAG	9 cut(s)	170, 251, 1133, 1200, 1275, 1673, 1772, 1869, 2004
BfmI	CTRYAG	2 cut(s)	294, 1530
BfoI	RGCGCY	1 cut(s)	48
BfuAI	ACCTGC	2 cut(s)	301, 1537
BglII	AGATCT	1 cut(s)	726
BisI	GCNGC	5 cut(s)	60, 117, 312, 530, 1238
BlsI	GCNGC	5 cut(s)	61, 118, 313, 531, 1239
BmcAI	AGTACT	1 cut(s)	168
Bme1390I	CCNGG	1 cut(s)	932
Bme18I	GGWCC	2 cut(s)	934, 1404
BmeT110I	CYCGRG	1 cut(s)	205
BmgT120I	GGNCC	4 cut(s)	35, 934, 954, 1404
BmiI	GGNNCC	6 cut(s)	46, 371, 403, 955, 1371, 1406
BmrFI	CCNGG	1 cut(s)	932
BmrI	ACTGGG	1 cut(s)	431
BmsI	GCATC	3 cut(s)	343, 1117, 1261
BmuI	ACTGGG	1 cut(s)	431
BpiI	GAAGAC	3 cut(s)	92, 716, 1542
BpmI	CTGGAG	2 cut(s)	648, 1431
Bpu10I	CCTNAGC	1 cut(s)	1400
Bpu14I	TTCGAA	1 cut(s)	196
BpuEI	CTTGAG	4 cut(s)	65, 537, 903, 951
BsaAI	YACGTR	1 cut(s)	1924
BsaBI	GATNNNNATC	2 cut(s)	1077, 1668
BsaHI	GRCGYC	1 cut(s)	45
BsaJI	CCNNGG	2 cut(s)	930, 1643
BsaWI	WCCGGW	1 cut(s)	334
Bsc4I	CCNNNNNNNGG	3 cut(s)	184, 686, 1718
Bse1I	ACTGG	4 cut(s)	437, 775, 1172, 1995
Bse3DI	GCAATG	1 cut(s)	244
Bse8I	GATNNNNATC	2 cut(s)	1077, 1668
BseBI	CCWGG	1 cut(s)	932
BseDI	CCNNGG	2 cut(s)	930, 1643
BseGI	GGATG	5 cut(s)	145, 154, 1549, 1786, 2023
BseJI	GATNNNNATC	2 cut(s)	1077, 1668
BseLI	CCNNNNNNNGG	3 cut(s)	184, 686, 1718
BseMI	GCAATG	1 cut(s)	244
BseMII	CTCAG	3 cut(s)	728, 1418, 1674
BseNI	ACTGG	4 cut(s)	437, 775, 1172, 1995
BseRI	GAGGAG	1 cut(s)	812
BseXI	GCAGC	3 cut(s)	46, 541, 1224
BshFI	GGCC	3 cut(s)	37, 116, 956
BshNI	GGYRCC	2 cut(s)	44, 401
BsiHKCI	CYCGRG	1 cut(s)	205
BsiSI	CCGG	1 cut(s)	335
BslFI	GGGAC	1 cut(s)	1390
BslI	CCNNNNNNNGG	3 cut(s)	184, 686, 1718
BsmAI	GTCTC	5 cut(s)	95, 1679, 1922, 1979, 2136
BsmFI	GGGAC	1 cut(s)	1390
BsnI	GGCC	3 cut(s)	37, 116, 956
BsoBI	CYCGRG	1 cut(s)	205
Bsp119I	TTCGAA	1 cut(s)	196
Bsp1407I	TGTACA	1 cut(s)	1507
BspACI	CCGC	2 cut(s)	117, 311
BspANI	GGCC	3 cut(s)	37, 116, 956
BspCNI	CTCAG	3 cut(s)	727, 1419, 1675
BspLI	GGNNCC	6 cut(s)	46, 371, 403, 955, 1371, 1406
BspMAI	CTGCAG	2 cut(s)	298, 1534
BspMI	ACCTGC	2 cut(s)	301, 1537
BspPI	GGATC	6 cut(s)	786, 1067, 1073, 1677, 2027, 2082
BspQI	GCTCTTC	2 cut(s)	852, 1005
BspT104I	TTCGAA	1 cut(s)	196
BspT107I	GGYRCC	2 cut(s)	44, 401
BsrDI	GCAATG	1 cut(s)	244
BsrGI	TGTACA	1 cut(s)	1507
BsrI	ACTGG	4 cut(s)	437, 775, 1172, 1995
BssECI	CCNNGG	2 cut(s)	930, 1643
BssNI	GRCGYC	1 cut(s)	45
BssT1I	CCWWGG	1 cut(s)	1643
Bst2UI	CCWGG	1 cut(s)	932
Bst4CI	ACNGT	7 cut(s)	68, 413, 1472, 1522, 1567, 1713, 1916
Bst6I	CTCTTC	4 cut(s)	25, 852, 987, 1005
BstACI	GRCGYC	1 cut(s)	45
BstAPI	GCANNNNNTGC	1 cut(s)	1589
BstAUI	TGTACA	1 cut(s)	1507
BstBAI	YACGTR	1 cut(s)	1924
BstBI	TTCGAA	1 cut(s)	196
BstC8I	GCNNGC	2 cut(s)	406, 2028
BstDEI	CTNAG	7 cut(s)	714, 869, 877, 1020, 1400, 1427, 1683
BstF5I	GGATG	5 cut(s)	145, 154, 1549, 1786, 2023
BstH2I	RGCGCY	1 cut(s)	48
BstHHI	GCGC	1 cut(s)	47
BstMAI	GTCTC	5 cut(s)	95, 1679, 1922, 1979, 2136
BstMWI	GCNNNNNNNGC	1 cut(s)	1589
BstNI	CCWGG	1 cut(s)	932
BstSCI	CCNGG	1 cut(s)	930
BstSFI	CTRYAG	2 cut(s)	294, 1530
BstV1I	GCAGC	3 cut(s)	46, 541, 1224
BstV2I	GAAGAC	3 cut(s)	92, 716, 1542
BstX2I	RGATCY	4 cut(s)	726, 1072, 1078, 1669
BstXI	CCANNNNNNTGG	1 cut(s)	1186
BstYI	RGATCY	4 cut(s)	726, 1072, 1078, 1669
BsuRI	GGCC	3 cut(s)	37, 116, 956
BtsCI	GGATG	5 cut(s)	145, 154, 1549, 1786, 2023
BtsI	GCAGTG	1 cut(s)	681
BtsIMutI	CAGTG	3 cut(s)	681, 1866, 1988
BveI	ACCTGC	2 cut(s)	301, 1537
Cac8I	GCNNGC	2 cut(s)	406, 2028
CaiI	CAGNNNCTG	2 cut(s)	104, 680
CfoI	GCGC	1 cut(s)	47
Cfr13I	GGNCC	4 cut(s)	35, 934, 954, 1404
Csp6I	GTAC	7 cut(s)	167, 449, 564, 1508, 1563, 1760, 1885
CviAII	CATG	9 cut(s)	623, 722, 761, 889, 1051, 1268, 1319, 1560, 1790
CviQI	GTAC	7 cut(s)	167, 449, 564, 1508, 1563, 1760, 1885
DdeI	CTNAG	7 cut(s)	714, 869, 877, 1020, 1400, 1427, 1683
DinI	GGCGCC	1 cut(s)	46
DraI	TTTAAA	1 cut(s)	135
EaeI	YGGCCR	1 cut(s)	114
Eam1104I	CTCTTC	4 cut(s)	25, 852, 987, 1005
EarI	CTCTTC	4 cut(s)	25, 852, 987, 1005
Eco130I	CCWWGG	1 cut(s)	1643
Eco32I	GATATC	1 cut(s)	1380
Eco47I	GGWCC	2 cut(s)	934, 1404
Eco57I	CTGAAG	2 cut(s)	702, 1674
Eco72I	CACGTG	1 cut(s)	1924
Eco88I	CYCGRG	1 cut(s)	205
EcoO109I	RGGNCCY	2 cut(s)	35, 1404
EcoRI	GAATTC	1 cut(s)	690
EcoRII	CCWGG	1 cut(s)	930
EcoRV	GATATC	1 cut(s)	1380
EcoT14I	CCWWGG	1 cut(s)	1643
EgeI	GGCGCC	1 cut(s)	46
EheI	GGCGCC	1 cut(s)	46
ErhI	CCWWGG	1 cut(s)	1643
FaeI	CATG	9 cut(s)	626, 725, 764, 892, 1054, 1271, 1322, 1563, 1793
FalI	AAGNNNNNCTT	2 cut(s)	22, 54
FaqI	GGGAC	1 cut(s)	1390
FatI	CATG	9 cut(s)	622, 721, 760, 888, 1050, 1267, 1318, 1559, 1789
FauNDI	CATATG	4 cut(s)	50, 390, 985, 1096
FbaI	TGATCA	1 cut(s)	385
Fnu4HI	GCNGC	5 cut(s)	60, 117, 312, 530, 1238
FokI	GGATG	5 cut(s)	152, 161, 1556, 1793, 2030
Fsp4HI	GCNGC	5 cut(s)	60, 117, 312, 530, 1238
FspBI	CTAG	9 cut(s)	170, 251, 1133, 1200, 1275, 1673, 1772, 1869, 2004
GlaI	GCGC	1 cut(s)	46
GluI	GCNGC	5 cut(s)	60, 117, 312, 530, 1238
GsuI	CTGGAG	2 cut(s)	648, 1431
HaeII	RGCGCY	1 cut(s)	48
HaeIII	GGCC	3 cut(s)	37, 116, 956
HapII	CCGG	1 cut(s)	335
HhaI	GCGC	1 cut(s)	47
Hin1I	GRCGYC	1 cut(s)	45
Hin1II	CATG	9 cut(s)	626, 725, 764, 892, 1054, 1271, 1322, 1563, 1793
Hin6I	GCGC	1 cut(s)	45
HinP1I	GCGC	1 cut(s)	45
HinfI	GANTC	6 cut(s)	661, 712, 926, 997, 1648, 2112
HpaII	CCGG	1 cut(s)	335
HphI	GGTGA	4 cut(s)	452, 638, 785, 2005
Hpy166II	GTNNAC	3 cut(s)	449, 791, 1927
Hpy188I	TCNGA	7 cut(s)	443, 708, 717, 837, 846, 1492, 2122
Hpy8I	GTNNAC	3 cut(s)	449, 791, 1927
HpyAV	CCTTC	4 cut(s)	762, 1689, 1749, 1823
HpyCH4III	ACNGT	7 cut(s)	68, 413, 1472, 1522, 1567, 1713, 1916
HpyCH4IV	ACGT	2 cut(s)	1386, 1923
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1589
HpyF3I	CTNAG	7 cut(s)	714, 869, 877, 1020, 1400, 1427, 1683
HpySE526I	ACGT	2 cut(s)	1386, 1923
Hsp92I	GRCGYC	1 cut(s)	45
Hsp92II	CATG	9 cut(s)	626, 725, 764, 892, 1054, 1271, 1322, 1563, 1793
HspAI	GCGC	1 cut(s)	45
KasI	GGCGCC	1 cut(s)	44
Ksp22I	TGATCA	1 cut(s)	385
LguI	GCTCTTC	2 cut(s)	852, 1005
LmnI	GCTCC	4 cut(s)	369, 503, 1369, 1721
Lsp1109I	GCAGC	3 cut(s)	46, 541, 1224
LweI	GCATC	3 cut(s)	343, 1117, 1261
MaeI	CTAG	9 cut(s)	170, 251, 1133, 1200, 1275, 1673, 1772, 1869, 2004
MaeII	ACGT	2 cut(s)	1386, 1923
MaeIII	GTNAC	2 cut(s)	1023, 2113
MflI	RGATCY	4 cut(s)	726, 1072, 1078, 1669
Mly113I	GGCGCC	1 cut(s)	45
MlyI	GAGTC	4 cut(s)	655, 706, 1657, 2121
MmeI	TCCRAC	3 cut(s)	1446, 1549, 1914
MseI	TTAA	6 cut(s)	134, 273, 485, 615, 1436, 1836
MslI	CAYNNNNRTG	2 cut(s)	786, 1005
MspI	CCGG	1 cut(s)	335
MspR9I	CCNGG	1 cut(s)	932
MvaI	CCWGG	1 cut(s)	932
MwoI	GCNNNNNNNGC	1 cut(s)	1589
NarI	GGCGCC	1 cut(s)	45
NdeI	CATATG	4 cut(s)	50, 390, 985, 1096
NlaIII	CATG	9 cut(s)	626, 725, 764, 892, 1054, 1271, 1322, 1563, 1793
NlaIV	GGNNCC	6 cut(s)	46, 371, 403, 955, 1371, 1406
NmuCI	GTSAC	1 cut(s)	2113
NspV	TTCGAA	1 cut(s)	196
PaeR7I	CTCGAG	1 cut(s)	205
PaqCI	CACCTGC	1 cut(s)	301
PciSI	GCTCTTC	2 cut(s)	852, 1005
PfeI	GAWTC	2 cut(s)	926, 997
PkrI	GCNGC	5 cut(s)	61, 118, 313, 531, 1239
PleI	GAGTC	4 cut(s)	655, 706, 1656, 2120
PluTI	GGCGCC	1 cut(s)	48
PmaCI	CACGTG	1 cut(s)	1924
PmlI	CACGTG	1 cut(s)	1924
PpsI	GAGTC	4 cut(s)	655, 706, 1656, 2120
Ppu21I	YACGTR	1 cut(s)	1924
PpuMI	RGGWCCY	1 cut(s)	1404
Psp1406I	AACGTT	1 cut(s)	1386
Psp5II	RGGWCCY	1 cut(s)	1404
Psp6I	CCWGG	1 cut(s)	930
PspCI	CACGTG	1 cut(s)	1924
PspGI	CCWGG	1 cut(s)	930
PspN4I	GGNNCC	6 cut(s)	46, 371, 403, 955, 1371, 1406
PspPI	GGNCC	4 cut(s)	35, 934, 954, 1404
PspPPI	RGGWCCY	1 cut(s)	1404
PspXI	VCTCGAGB	1 cut(s)	205
PstI	CTGCAG	2 cut(s)	298, 1534
PstNI	CAGNNNCTG	2 cut(s)	104, 680
PsuI	RGATCY	4 cut(s)	726, 1072, 1078, 1669
RsaI	GTAC	7 cut(s)	168, 450, 565, 1509, 1564, 1761, 1886
RsaNI	GTAC	7 cut(s)	167, 449, 564, 1508, 1563, 1760, 1885
RseI	CAYNNNNRTG	2 cut(s)	786, 1005
SapI	GCTCTTC	2 cut(s)	852, 1005
SaqAI	TTAA	6 cut(s)	134, 273, 485, 615, 1436, 1836
SatI	GCNGC	5 cut(s)	60, 117, 312, 530, 1238
Sau96I	GGNCC	4 cut(s)	35, 934, 954, 1404
ScaI	AGTACT	1 cut(s)	168
SchI	GAGTC	4 cut(s)	655, 706, 1657, 2121
ScrFI	CCNGG	1 cut(s)	932
SfaNI	GCATC	3 cut(s)	343, 1117, 1261
SfcI	CTRYAG	2 cut(s)	294, 1530
SfoI	GGCGCC	1 cut(s)	46
Sfr274I	CTCGAG	1 cut(s)	205
SfuI	TTCGAA	1 cut(s)	196
SinI	GGWCC	2 cut(s)	934, 1404
SlaI	CTCGAG	1 cut(s)	205
SmiMI	CAYNNNNRTG	2 cut(s)	786, 1005
SmlI	CTYRAG	5 cut(s)	80, 205, 552, 918, 966
SmoI	CTYRAG	5 cut(s)	80, 205, 552, 918, 966
SsiI	CCGC	2 cut(s)	117, 311
SspDI	GGCGCC	1 cut(s)	44
SspI	AATATT	1 cut(s)	1060
SspMI	CTAG	9 cut(s)	170, 251, 1133, 1200, 1275, 1673, 1772, 1869, 2004
StyD4I	CCNGG	1 cut(s)	930
StyI	CCWWGG	1 cut(s)	1643
TaaI	ACNGT	7 cut(s)	68, 413, 1472, 1522, 1567, 1713, 1916
TaiI	ACGT	2 cut(s)	1389, 1926
TaqI	TCGA	5 cut(s)	196, 206, 494, 1848, 2140
TatI	WGTACW	4 cut(s)	166, 448, 1507, 1562
TauI	GCSGC	2 cut(s)	119, 314
TfiI	GAWTC	2 cut(s)	926, 997
Tru1I	TTAA	6 cut(s)	134, 273, 485, 615, 1436, 1836
Tru9I	TTAA	6 cut(s)	134, 273, 485, 615, 1436, 1836
TscAI	CASTG	3 cut(s)	681, 1866, 1995
TseFI	GTSAC	1 cut(s)	2113
TseI	GCWGC	3 cut(s)	59, 529, 1237
Tsp45I	GTSAC	1 cut(s)	2113
TspDTI	ATGAA	9 cut(s)	156, 255, 444, 651, 972, 1023, 1067, 1625, 2012
TspGWI	ACGGA	1 cut(s)	527
TspRI	CASTG	3 cut(s)	681, 1866, 1995
VpaK11BI	GGWCC	2 cut(s)	934, 1404
XapI	RAATTY	6 cut(s)	129, 263, 395, 690, 1360, 1820
XbaI	TCTAGA	1 cut(s)	1771
XcmI	CCANNNNNNNNNTGG	1 cut(s)	767
XhoI	CTCGAG	1 cut(s)	205
XspI	CTAG	9 cut(s)	170, 251, 1133, 1200, 1275, 1673, 1772, 1869, 2004
ZrmI	AGTACT	1 cut(s)	168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.