Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000681

Physical Location & Seq

Genomic Coordinates Reverse (-)

70285360 .. 70289354

Gene Structure 3995 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0579600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGTCAGACCTCCCCAACCCTCCCTACGATCTCATCATCCTCGGCGCCTCCGGCTTCACCGGAAAATACGTCGTGAAAGAAGCCCTCAAGTTCCTCAACACCCCCTCCTCACCTCTCAAGTCTCTAGCCTTAGCCGGCCGCAACCCCACAAAGCTCTCCCAAACCCTCAACTGGGCCACCGCCCCAAACCCACCTCCCTCCATTCCCATCCTCACCGCCGACACCACCGATCCCCCGTCCCTCCGCCGCCTCTGCTCCCAAACCCGCCTCATCCTCAACTGCGTGGGCCCCTTCCGCCTCTACGGCGACCCCGTCGTCGCCGCGTGCGTTGAGACCGGCTGTGATTATCTCGACATATCCGGAGAGCCGGAGTTCATGGAGAGGATGGAGGCCAGTTATTTCGATAAGGCGGCGGAGAAGGCCTCGTTGGTCATTTCGGCTTGTGGGTTTGACTCTGTTCCGGCGGAGTTTGGGTTGATGTTTAACTCGAGGCAGTGGGTGGGGGCGGCGGTGCCGAATAGGGTGGAGGCTTATCTGAGCTTGGAGTCTGAGAAGAGAATTGTTGGGAACTTCGGGACGTTTGAGTCGGCGGTGTTGGGTGTGGCTAATGCGGATAAGTTGATGGAGCTCCGGCGGTCCAGACCTAAAAAGCCGAGGCCGGAGATTCCTGGTCCTCCTCCTTCTAAAGGACCAACCATTGAACACCAGAAAAAGATTGGCCTTTGGGCTGTGAAGCTACCTTCAGCAGATGCTATCGTTGTACGAAGAACACTTGGAGCTCTGACTGAAAATCCCGGCGGTCTTCCAGGGAGGAATGAGAGTGACGAACACATTAAAAAAAGAGAAGCCTTCTGGTCAACAGTGAAGCCAGCTCATTTCGGGGTGAAGATAGGCACCAAGTCTCTGTTGGGCATTTTTCGAATCATGACAGTTGGGATCTTTATTGGGCTCTTGGGTCAGTTTTCCTTTGGGAGGTGGCTTCTCTTAAAGTTTCCCTCATTTTTCAGTGTTGGATGGTTCAGGAAGCAGGGTCCCTCCGATGAGGAGGTGAGAAGTGCATCTTTTAAGATGTGGTTTGTTGGACGTGGTTTCAGCGACAGGAGTCTTGTATCTCAGGGAAACACAAAACCTGATATGGAAATAGTAACAAGAGTTATGGGACCTGAAATTGGCTACTTAACAACCCCGATAATTCTGCTTCAGTGTGCACTTATTGTTCTGAGCCAGCGCGACAATCTTCCAAAGGGAGGAGTTTTCCCAGCTGGGATTGTATTTGGCCCAACCGATCTCCAAGAAAGGCTACAAGAAAATGGAGTTTCTTTTGATGTTATTTCGAAGAATGCTATTTCTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

451

Amino Acids

49.3

Weight (kDa)

9.18

Isoelectric Point (pI)

43.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sacchrp_dh_NADP	PF03435	12 - 134	1.9e-10	Saccharopine dehydrogenase NADP binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840
fragaria_vesca	FvH4_6g53040 FvH4_6g53040 FvH4_6g53050 FvH4_6g53050
malus_domestica	MD09G1015100.v1.1 MD09G1015200.v1.1 MD17G1015200.v1.1
prunus_persica	Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1
pyrus_communis	pycom111g01230 pycom17g01230 pycom17g01240
rosa_chinensis	RchiOBHm_Chr2g0146031 RchiOBHm_Chr2g0172041 RchiOBHm_Chr2g0172061 RchiOBHm_Chr2g0172121 RchiOBHm_Chr2g0172131 RchiOBHm_Chr2g0172161 RchiOBHm_Chr2g0173841 RchiOBHm_Chr2g0174821 RchiOBHm_Chr2g0174831
rosa_laevigata	RLG00000022078 RLG00000022079 RLG00000022228 RLG00000022298 RLG00000022299 RLG00000032768
rosa_multiflora	Rmu_co8137076.1_g000001 Rmu_sc0001716.1_g000038 Rmu_sc0003188.1_g000021 Rmu_sc0015734.1_g000001 Rmu_sc0038259.1_g000001 Rmu_sc0038259.1_g000002 Rmu_sc0040737.1_g000001 Rmu_sc0041600.1_g000001 Rmu_ssc0000252.1_g000045
rosa_roxburghii	Rroxscaffold_2G00077660 Rroxscaffold_2G00080120 Rroxscaffold_2G00080130 Rroxscaffold_2G00080290
rosa_rugosa	Rorug02G0579500 Rorug02G0579600
rosa_samantha	Rh2AG632100 Rh2AG632200 Rh2AG656700 Rh2AG656800 Rh2AG660800 Rh2AG660900 Rh2BG645600 Rh2BG645700 Rh2BG667700 Rh2BG667800 Rh2BG672200 Rh2BG672300 Rh2CG627800 Rh2CG627900 Rh2CG635000 Rh2CG635100 Rh2DG658600 Rh2DG678300 Rh2DG685300 Rh2DG685400 Rh6AG066100 Rh6BG058900
rosa_wichuraiana	Rw2G053570 Rw2G054150 Rw2G054160 Rw6G005810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	314, 583
AccB1I	GGYRCC	3 cut(s)	44, 511, 893
AccII	CGCG	2 cut(s)	323, 1230
AccIII	TCCGGA	1 cut(s)	359
AclWI	GGATC	2 cut(s)	224, 944
AcoI	YGGCCR	1 cut(s)	136
AcuI	CTGAAG	2 cut(s)	726, 1184
AcyI	GRCGYC	1 cut(s)	45
AfaI	GTAC	1 cut(s)	762
AfiI	CCNNNNNNNGG	6 cut(s)	171, 172, 686, 972, 1169, 1247
AgsI	TTSAA	1 cut(s)	701
AjiI	CACGTC	1 cut(s)	1085
AjnI	CCWGG	2 cut(s)	667, 805
AjuI	GAANNNNNNNTTGG	2 cut(s)	410, 442
AluBI	AGCT	7 cut(s)	154, 540, 628, 736, 779, 872, 1262
AluI	AGCT	7 cut(s)	154, 540, 628, 736, 779, 872, 1262
Alw21I	GWGCWC	3 cut(s)	630, 781, 1210
Alw26I	GTCTC	3 cut(s)	126, 326, 906
Alw44I	GTGCAC	1 cut(s)	1206
AlwI	GGATC	2 cut(s)	224, 944
Ama87I	CYCGRG	1 cut(s)	487
Aor13HI	TCCGGA	1 cut(s)	359
AoxI	GGCC	8 cut(s)	136, 174, 286, 390, 420, 656, 718, 1276
ApaI	GGGCCC	1 cut(s)	290
ApaLI	GTGCAC	1 cut(s)	1206
AspLEI	GCGC	2 cut(s)	47, 1230
AspS9I	GGNCC	9 cut(s)	174, 286, 287, 636, 671, 689, 1031, 1160, 1277
AsuC2I	CCSGG	1 cut(s)	795
AsuHPI	GGTGA	5 cut(s)	49, 102, 205, 895, 1060
AsuII	TTCGAA	2 cut(s)	919, 1334
AvaI	CYCGRG	1 cut(s)	487
AvaII	GGWCC	5 cut(s)	636, 671, 689, 1031, 1160
BaeGI	GKGCMC	2 cut(s)	290, 1210
BanI	GGYRCC	3 cut(s)	44, 511, 893
BanII	GRGCYC	4 cut(s)	290, 630, 781, 951
BbsI	GAAGAC	1 cut(s)	794
Bbv12I	GWGCWC	3 cut(s)	630, 781, 1210
BccI	CCATC	4 cut(s)	215, 379, 616, 1008
BceAI	ACGGC	1 cut(s)	319
BcgI	CGANNNNNNTGC	2 cut(s)	1177, 1211
BciT130I	CCWGG	2 cut(s)	669, 807
BcnI	CCSGG	1 cut(s)	795
BcoDI	GTCTC	3 cut(s)	126, 326, 906
BfaI	CTAG	1 cut(s)	125
BfoI	RGCGCY	1 cut(s)	48
BglI	GCCNNNNNGGC	1 cut(s)	303
BisI	GCNGC	5 cut(s)	139, 247, 321, 411, 507
BlsI	GCNGC	5 cut(s)	140, 248, 322, 412, 508
Bme1390I	CCNGG	3 cut(s)	669, 795, 807
Bme18I	GGWCC	5 cut(s)	636, 671, 689, 1031, 1160
BmeT110I	CYCGRG	1 cut(s)	487
BmgBI	CACGTC	1 cut(s)	1085
BmgT120I	GGNCC	9 cut(s)	174, 286, 287, 636, 671, 689, 1031, 1160, 1277
BmiI	GGNNCC	8 cut(s)	46, 288, 289, 513, 895, 1032, 1033, 1161
BmrFI	CCNGG	3 cut(s)	669, 795, 807
BmrI	ACTGGG	1 cut(s)	181
BmsI	GCATC	2 cut(s)	739, 1067
BmuI	ACTGGG	1 cut(s)	181
BoxI	GACNNNNGTC	1 cut(s)	1101
BpiI	GAAGAC	1 cut(s)	794
BplI	GAGNNNNNCTC	2 cut(s)	407, 439
Bpu10I	CCTNAGC	1 cut(s)	130
Bpu14I	TTCGAA	2 cut(s)	919, 1334
BpuEI	CTTGAG	2 cut(s)	71, 101
BpuMI	CCSGG	1 cut(s)	795
BsaHI	GRCGYC	1 cut(s)	45
BsaI	GGTCTC	1 cut(s)	326
BsaJI	CCNNGG	3 cut(s)	40, 653, 806
BsaWI	WCCGGW	2 cut(s)	59, 359
BsaXI	ACNNNNNCTCC	4 cut(s)	89, 119, 458, 488
Bsc4I	CCNNNNNNNGG	6 cut(s)	171, 172, 686, 972, 1169, 1247
Bse118I	RCCGGY	2 cut(s)	134, 335
Bse1I	ACTGG	2 cut(s)	176, 393
BseAI	TCCGGA	1 cut(s)	359
BseBI	CCWGG	2 cut(s)	669, 807
BseDI	CCNNGG	3 cut(s)	40, 653, 806
BseGI	GGATG	5 cut(s)	36, 207, 270, 390, 1019
BseLI	CCNNNNNNNGG	6 cut(s)	171, 172, 686, 972, 1169, 1247
BseMII	CTCAG	4 cut(s)	527, 540, 1127, 1211
BseNI	ACTGG	2 cut(s)	176, 393
BseRI	GAGGAG	4 cut(s)	97, 666, 1058, 1263
BseSI	GKGCMC	2 cut(s)	290, 1210
BseX3I	CGGCCG	1 cut(s)	136
BseYI	CCCAGC	2 cut(s)	1258, 1262
Bsh1236I	CGCG	2 cut(s)	323, 1230
Bsh1285I	CGRYCG	1 cut(s)	139
BshFI	GGCC	8 cut(s)	138, 176, 288, 392, 422, 658, 720, 1278
BshNI	GGYRCC	3 cut(s)	44, 511, 893
BsiEI	CGRYCG	1 cut(s)	139
BsiHKAI	GWGCWC	3 cut(s)	630, 781, 1210
BsiHKCI	CYCGRG	1 cut(s)	487
BslFI	GGGAC	4 cut(s)	223, 589, 1017, 1173
BslI	CCNNNNNNNGG	6 cut(s)	171, 172, 686, 972, 1169, 1247
BsmAI	GTCTC	3 cut(s)	126, 326, 906
BsmFI	GGGAC	4 cut(s)	223, 589, 1017, 1173
BsmI	GAATGC	1 cut(s)	1345
BsnI	GGCC	8 cut(s)	138, 176, 288, 392, 422, 658, 720, 1278
Bso31I	GGTCTC	1 cut(s)	326
BsoBI	CYCGRG	1 cut(s)	487
Bsp119I	TTCGAA	2 cut(s)	919, 1334
Bsp120I	GGGCCC	1 cut(s)	286
Bsp1286I	GDGCHC	5 cut(s)	290, 630, 781, 951, 1210
Bsp13I	TCCGGA	1 cut(s)	359
Bsp143I	GATC	4 cut(s)	28, 229, 936, 1285
BspANI	GGCC	8 cut(s)	138, 176, 288, 392, 422, 658, 720, 1278
BspCNI	CTCAG	4 cut(s)	528, 541, 1126, 1212
BspEI	TCCGGA	1 cut(s)	359
BspFNI	CGCG	2 cut(s)	323, 1230
BspHI	TCATGA	1 cut(s)	924
BspLI	GGNNCC	8 cut(s)	46, 288, 289, 513, 895, 1032, 1033, 1161
BspPI	GGATC	2 cut(s)	224, 944
BspT104I	TTCGAA	2 cut(s)	919, 1334
BspT107I	GGYRCC	3 cut(s)	44, 511, 893
BspTNI	GGTCTC	1 cut(s)	326
BsrFI	RCCGGY	2 cut(s)	134, 335
BsrI	ACTGG	2 cut(s)	176, 393
BssAI	RCCGGY	2 cut(s)	134, 335
BssECI	CCNNGG	3 cut(s)	40, 653, 806
BssMI	GATC	4 cut(s)	28, 229, 936, 1285
BssNI	GRCGYC	1 cut(s)	45
Bst2UI	CCWGG	2 cut(s)	669, 807
Bst4CI	ACNGT	2 cut(s)	862, 931
Bst6I	CTCTTC	1 cut(s)	548
BstACI	GRCGYC	1 cut(s)	45
BstBI	TTCGAA	2 cut(s)	919, 1334
BstC8I	GCNNGC	4 cut(s)	136, 325, 870, 1226
BstDEI	CTNAG	5 cut(s)	130, 536, 549, 1113, 1220
BstENI	CCTNNNNNAGG	2 cut(s)	684, 970
BstF5I	GGATG	5 cut(s)	36, 207, 270, 390, 1019
BstFNI	CGCG	2 cut(s)	323, 1230
BstH2I	RGCGCY	1 cut(s)	48
BstHHI	GCGC	2 cut(s)	47, 1230
BstKTI	GATC	4 cut(s)	31, 232, 939, 1288
BstMAI	GTCTC	3 cut(s)	126, 326, 906
BstMBI	GATC	4 cut(s)	28, 229, 936, 1285
BstMCI	CGRYCG	1 cut(s)	139
BstMWI	GCNNNNNNNGC	5 cut(s)	51, 252, 294, 303, 419
BstNI	CCWGG	2 cut(s)	669, 807
BstPAI	GACNNNNGTC	1 cut(s)	1101
BstSCI	CCNGG	3 cut(s)	667, 793, 805
BstSLI	GKGCMC	2 cut(s)	290, 1210
BstUI	CGCG	2 cut(s)	323, 1230
BstV2I	GAAGAC	1 cut(s)	794
BstX2I	RGATCY	1 cut(s)	936
BstYI	RGATCY	1 cut(s)	936
BstZI	CGGCCG	1 cut(s)	136
BsuRI	GGCC	8 cut(s)	138, 176, 288, 392, 422, 658, 720, 1278
BtrI	CACGTC	1 cut(s)	1085
BtsCI	GGATG	5 cut(s)	36, 207, 270, 390, 1019
BtsI	GCAGTG	1 cut(s)	500
BtsIMutI	CAGTG	4 cut(s)	500, 867, 1012, 1208
Cac8I	GCNNGC	4 cut(s)	136, 325, 870, 1226
CciI	TCATGA	1 cut(s)	924
CfoI	GCGC	2 cut(s)	47, 1230
Cfr10I	RCCGGY	2 cut(s)	134, 335
Cfr13I	GGNCC	9 cut(s)	174, 286, 287, 636, 671, 689, 1031, 1160, 1277
Csp6I	GTAC	1 cut(s)	761
CviAII	CATG	2 cut(s)	376, 925
CviQI	GTAC	1 cut(s)	761
DdeI	CTNAG	5 cut(s)	130, 536, 549, 1113, 1220
DinI	GGCGCC	1 cut(s)	46
DpnI	GATC	4 cut(s)	30, 231, 938, 1287
DpnII	GATC	4 cut(s)	28, 229, 936, 1285
DrdI	GACNNNNNNGTC	2 cut(s)	314, 583
DseDI	GACNNNNNNGTC	2 cut(s)	314, 583
EaeI	YGGCCR	1 cut(s)	136
EagI	CGGCCG	1 cut(s)	136
Eam1104I	CTCTTC	1 cut(s)	548
EarI	CTCTTC	1 cut(s)	548
EciI	GGCGGA	4 cut(s)	233, 284, 428, 479
Ecl136II	GAGCTC	2 cut(s)	628, 779
EclXI	CGGCCG	1 cut(s)	136
Eco147I	AGGCCT	1 cut(s)	422
Eco24I	GRGCYC	4 cut(s)	290, 630, 781, 951
Eco31I	GGTCTC	1 cut(s)	326
Eco47I	GGWCC	5 cut(s)	636, 671, 689, 1031, 1160
Eco52I	CGGCCG	1 cut(s)	136
Eco53kI	GAGCTC	2 cut(s)	628, 779
Eco57I	CTGAAG	2 cut(s)	726, 1184
Eco88I	CYCGRG	1 cut(s)	487
EcoICRI	GAGCTC	2 cut(s)	628, 779
EcoNI	CCTNNNNNAGG	2 cut(s)	684, 970
EcoO109I	RGGNCCY	3 cut(s)	287, 1031, 1160
EcoRII	CCWGG	2 cut(s)	667, 805
EcoT38I	GRGCYC	4 cut(s)	290, 630, 781, 951
EgeI	GGCGCC	1 cut(s)	46
EheI	GGCGCC	1 cut(s)	46
FaeI	CATG	2 cut(s)	379, 928
FaiI	YATR	5 cut(s)	356, 377, 926, 1136, 1157
FalI	AAGNNNNNCTT	2 cut(s)	1045, 1077
FaqI	GGGAC	4 cut(s)	223, 589, 1017, 1173
FatI	CATG	2 cut(s)	375, 924
FauI	CCCGC	1 cut(s)	272
Fnu4HI	GCNGC	5 cut(s)	139, 247, 321, 411, 507
FokI	GGATG	5 cut(s)	23, 194, 257, 397, 1026
FriOI	GRGCYC	4 cut(s)	290, 630, 781, 951
Fsp4HI	GCNGC	5 cut(s)	139, 247, 321, 411, 507
FspBI	CTAG	1 cut(s)	125
GlaI	GCGC	2 cut(s)	46, 1229
GluI	GCNGC	5 cut(s)	139, 247, 321, 411, 507
GsaI	CCCAGC	2 cut(s)	1262, 1266
HaeII	RGCGCY	1 cut(s)	48
HaeIII	GGCC	8 cut(s)	138, 176, 288, 392, 422, 658, 720, 1278
HhaI	GCGC	2 cut(s)	47, 1230
Hin1I	GRCGYC	1 cut(s)	45
Hin1II	CATG	2 cut(s)	379, 928
Hin6I	GCGC	2 cut(s)	45, 1228
HinP1I	GCGC	2 cut(s)	45, 1228
HincII	GTYRAC	1 cut(s)	858
HindII	GTYRAC	1 cut(s)	858
HinfI	GANTC	6 cut(s)	452, 545, 584, 664, 921, 1102
HphI	GGTGA	5 cut(s)	49, 102, 205, 895, 1060
Hpy166II	GTNNAC	2 cut(s)	858, 1208
Hpy188I	TCNGA	6 cut(s)	7, 537, 550, 783, 1039, 1221
Hpy188III	TCNNGA	7 cut(s)	73, 350, 360, 574, 639, 925, 1021
Hpy8I	GTNNAC	2 cut(s)	858, 1208
Hpy99I	CGWCG	3 cut(s)	74, 317, 320
HpyAV	CCTTC	5 cut(s)	301, 412, 690, 750, 859
HpyCH4III	ACNGT	2 cut(s)	862, 931
HpyCH4IV	ACGT	3 cut(s)	69, 578, 1084
HpyCH4V	TGCA	2 cut(s)	1058, 1208
HpyF10VI	GCNNNNNNNGC	5 cut(s)	51, 252, 294, 303, 419
HpyF3I	CTNAG	5 cut(s)	130, 536, 549, 1113, 1220
HpySE526I	ACGT	3 cut(s)	69, 578, 1084
Hsp92I	GRCGYC	1 cut(s)	45
Hsp92II	CATG	2 cut(s)	379, 928
HspAI	GCGC	2 cut(s)	45, 1228
KasI	GGCGCC	1 cut(s)	44
KflI	GGGWCCC	1 cut(s)	1031
Kpn2I	TCCGGA	1 cut(s)	359
KroI	GCCGGC	1 cut(s)	134
KroNI	GCCGGC	1 cut(s)	136
Kzo9I	GATC	4 cut(s)	28, 229, 936, 1285
LmnI	GCTCC	4 cut(s)	260, 625, 633, 776
LweI	GCATC	2 cut(s)	739, 1067
MaeI	CTAG	1 cut(s)	125
MaeII	ACGT	3 cut(s)	69, 578, 1084
MaeIII	GTNAC	2 cut(s)	821, 1144
MalI	GATC	4 cut(s)	30, 231, 938, 1287
MboI	GATC	4 cut(s)	28, 229, 936, 1285
MboII	GAAGA	6 cut(s)	565, 777, 794, 898, 1229, 1348
MflI	RGATCY	1 cut(s)	936
MhlI	GDGCHC	5 cut(s)	290, 630, 781, 951, 1210
MluCI	AATT	3 cut(s)	558, 1167, 1191
Mly113I	GGCGCC	1 cut(s)	45
MlyI	GAGTC	4 cut(s)	446, 554, 593, 1111
MmeI	TCCRAC	2 cut(s)	991, 1060
MroI	TCCGGA	1 cut(s)	359
MroNI	GCCGGC	1 cut(s)	134
MseI	TTAA	5 cut(s)	483, 834, 986, 1065, 1178
MspA1I	CMGCKG	1 cut(s)	1262
MspR9I	CCNGG	3 cut(s)	669, 795, 807
Mva1269I	GAATGC	1 cut(s)	1345
MvaI	CCWGG	2 cut(s)	669, 807
MvnI	CGCG	2 cut(s)	323, 1230
MwoI	GCNNNNNNNGC	5 cut(s)	51, 252, 294, 303, 419
NaeI	GCCGGC	1 cut(s)	136
NarI	GGCGCC	1 cut(s)	45
NciI	CCSGG	1 cut(s)	795
NdeII	GATC	4 cut(s)	28, 229, 936, 1285
NgoMIV	GCCGGC	1 cut(s)	134
NlaIII	CATG	2 cut(s)	379, 928
NlaIV	GGNNCC	8 cut(s)	46, 288, 289, 513, 895, 1032, 1033, 1161
NmeAIII	GCCGAG	2 cut(s)	21, 678
NmuCI	GTSAC	1 cut(s)	821
NspV	TTCGAA	2 cut(s)	919, 1334
PaeR7I	CTCGAG	1 cut(s)	487
PagI	TCATGA	1 cut(s)	924
PceI	AGGCCT	1 cut(s)	422
PcsI	WCGNNNNNNNCGW	2 cut(s)	309, 324
PctI	GAATGC	1 cut(s)	1345
PdiI	GCCGGC	1 cut(s)	136
PfeI	GAWTC	2 cut(s)	664, 921
PflFI	GACNNNGTC	1 cut(s)	311
PkrI	GCNGC	5 cut(s)	140, 248, 322, 412, 508
PleI	GAGTC	4 cut(s)	446, 553, 592, 1110
PluTI	GGCGCC	1 cut(s)	48
PpsI	GAGTC	4 cut(s)	446, 553, 592, 1110
PpuMI	RGGWCCY	2 cut(s)	1031, 1160
PshAI	GACNNNNGTC	1 cut(s)	1101
Psp124BI	GAGCTC	2 cut(s)	630, 781
Psp5II	RGGWCCY	2 cut(s)	1031, 1160
Psp6I	CCWGG	2 cut(s)	667, 805
PspFI	CCCAGC	2 cut(s)	1258, 1262
PspGI	CCWGG	2 cut(s)	667, 805
PspN4I	GGNNCC	8 cut(s)	46, 288, 289, 513, 895, 1032, 1033, 1161
PspOMI	GGGCCC	1 cut(s)	286
PspPI	GGNCC	9 cut(s)	174, 286, 287, 636, 671, 689, 1031, 1160, 1277
PspPPI	RGGWCCY	2 cut(s)	1031, 1160
PspXI	VCTCGAGB	1 cut(s)	487
PsuI	RGATCY	1 cut(s)	936
PsyI	GACNNNGTC	1 cut(s)	311
PvuII	CAGCTG	1 cut(s)	1262
RsaI	GTAC	1 cut(s)	762
RsaNI	GTAC	1 cut(s)	761
SacI	GAGCTC	2 cut(s)	630, 781
SaqAI	TTAA	5 cut(s)	483, 834, 986, 1065, 1178
SatI	GCNGC	5 cut(s)	139, 247, 321, 411, 507
Sau3AI	GATC	4 cut(s)	28, 229, 936, 1285
Sau96I	GGNCC	9 cut(s)	174, 286, 287, 636, 671, 689, 1031, 1160, 1277
SchI	GAGTC	4 cut(s)	446, 554, 593, 1111
ScrFI	CCNGG	3 cut(s)	669, 795, 807
SduI	GDGCHC	5 cut(s)	290, 630, 781, 951, 1210
SfaNI	GCATC	2 cut(s)	739, 1067
SfoI	GGCGCC	1 cut(s)	46
Sfr274I	CTCGAG	1 cut(s)	487
SfuI	TTCGAA	2 cut(s)	919, 1334
SinI	GGWCC	5 cut(s)	636, 671, 689, 1031, 1160
SlaI	CTCGAG	1 cut(s)	487
SmlI	CTYRAG	3 cut(s)	86, 116, 487
SmoI	CTYRAG	3 cut(s)	86, 116, 487
Sse9I	AATT	3 cut(s)	558, 1167, 1191
SseBI	AGGCCT	1 cut(s)	422
SspDI	GGCGCC	1 cut(s)	44
SspMI	CTAG	1 cut(s)	125
SstI	GAGCTC	2 cut(s)	630, 781
StuI	AGGCCT	1 cut(s)	422
StyD4I	CCNGG	3 cut(s)	667, 793, 805
TaaI	ACNGT	2 cut(s)	862, 931
TaiI	ACGT	3 cut(s)	72, 581, 1087
TaqI	TCGA	5 cut(s)	351, 402, 488, 919, 1334
TasI	AATT	3 cut(s)	558, 1167, 1191
TauI	GCSGC	5 cut(s)	141, 249, 323, 413, 509
TfiI	GAWTC	2 cut(s)	664, 921
Tru1I	TTAA	5 cut(s)	483, 834, 986, 1065, 1178
Tru9I	TTAA	5 cut(s)	483, 834, 986, 1065, 1178
TscAI	CASTG	4 cut(s)	500, 867, 1012, 1208
TseFI	GTSAC	1 cut(s)	821
Tsp45I	GTSAC	1 cut(s)	821
TspDTI	ATGAA	1 cut(s)	364
TspRI	CASTG	4 cut(s)	500, 867, 1012, 1208
Tth111I	GACNNNGTC	1 cut(s)	311
VneI	GTGCAC	1 cut(s)	1206
VpaK11BI	GGWCC	5 cut(s)	636, 671, 689, 1031, 1160
XagI	CCTNNNNNAGG	2 cut(s)	684, 970
XcmI	CCANNNNNNNNNTGG	2 cut(s)	713, 904
XhoI	CTCGAG	1 cut(s)	487
XspI	CTAG	1 cut(s)	125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.